| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3208474 | 19 (0.590) | 6 (0.190) | 6/240 | 2.9 | 24.8% | coding (451/1464 nt) | ttdT | L‑tartrate/succinate antiporte |
| ? | NC_000913 | = 3208513 | 18 (0.580) | coding (490/1464 nt) | ttdT | L‑tartrate/succinate antiporte | |||||
GCTATGAAAAAACCGGGCTTGGACGCCGCATTGCGCTGATTCTGGTGAAAAAGATGGGACATCGCACGCTGTTTCTCGGCTATGCGGTGATGTTCTCCGAGCTGATCCTCGCACCTGTAACACCGTCCAACTCGGCGCGTGGTGCGGGGATTATCTATCCCATCATCCGTAACCTGCCACCGCTCTATCAATCACAACCAAACGACAGCAGTTCGCGCAGCATTGGCTCGTACATCATGTGGATGGGGATTGTTGCCGACTGCGTGACCAGCGCCATTTTCTTGACGGCGA > NC_000913/3208367‑3208657 | gCTATGAAAAAACCGGGCTTGGACGCCGCATTGCGCTGATTCTGGTGAAAAAGATGGGACATCGCACGCTGTTTCTCGGCTATGCGGTGATGTTCTCCGAGCTGATCCTCGCACCTGTAACACCGTCCAACTCGGCGCGTGGTGCGGgg > 1:103329‑M2/1‑147 (MQ=255) aaaaaaCCGGGCTTGGACGCCGCATTGCGCTGATTCTGGTGAAAAAGATGGGACATCGCACGCTGTTTCTCGGCTATGCGGTGATGTTCTCCGAGCTGATCCTCGCACCTGTAACACCGTCCAACTCGGCGCGTGGTGCGGGGAtt > 4:63831/1‑146 (MQ=255) aaaaaaCCGGGCTTGGACGCCGCATTGCGCTGATTCTGGTGAAAAAGATGGGACATCGCACGCTGTTTCTCGGCTATGCGGTGATGTTCTCCGAGCTGATCCTCGCACCTGTAACACCGTCCAACTCGGCGCGTGGTGCGGGGAtt < 3:63831/146‑1 (MQ=255) ggACGCCGCATTGCGCTGATTCTGGTGAAAAAGATGGGACATCGCACGCTGTTTCTCGGCTATGCGGTGATGTTCTCCGAGATGATCCTCGCACCTGTAACACCGTCCAACTCGGCGCGTGGTGCGGGGATTATCTATCCCATCATCCg > 6:113229/1‑149 (MQ=255) gACGCCGCATTGCGCTGATTCTGGTGAAAAAGATGGGACATCGCACGCTGTTTCTCGGCTATGCGGTGATGTTCTCCGAGCTGATCCTCGCACCTGTAACACCGTCCAACTCGGCGCGTGGTGCGGGGATTATCTATCCCATCATCCg > 8:111751/1‑148 (MQ=255) cgcATTGCGCTGATTCTGGTGAAAAAGATGGGACATCGCACGCTGTTTCTCGGCTATGCGGTGATGTTCTCCGAGCTGATCCTCGCACCTGTAACACCGTCCAACTCGGCGCGTGGTGCGGGGATTATCTATCCCATCATCCGTAACCt > 3:131090/1‑149 (MQ=255) aTTGCGCTGATTCTGGTGAAAAAGATGGGACATCGCACGCTGTTTCTCGGCTATGCGGTGATGTTCTCCGAGATGATCCTCGCACCTGTAACACCGTCCAACTCGGCGCGTGGTGCGGGGATTATCTATCCCATCATCCGTAACCTGcc < 5:113229/149‑1 (MQ=255) ttGCGCTGATTCTGGTGAAAAAGATGGGACATCGCACGCTGTTTCTCGGCTATGCGGTGATGTTCTCCGAGCTGATCCTCGCACCTGTAACACCGTCCAACTCGGCGCGTGGTGCGGGGATTATCTATCCCATCATCCGTAACCTGCCa < 4:131090/149‑1 (MQ=255) aTCGCACGCTGTTTCTCGGCTATGCGGTGATGTTCTCCGAGCTGATCCTCGCACCTGTAACACCGTCCAACTCGGCGCGTGGTGCGGGGATTATCTATCCCATCATCCGTAACCTGCCACCGCTCTatcaa < 4:111606/131‑1 (MQ=255) aTCGCACGCTGTTTCTCGGCTATGCGGTGATGTTCTCCGAGCTGATCCTCGCACCTGTAACACCGTCCAACTCGGCGCGTGGTGCGGGGATTATCTATCCCATCATCCGTAACCTGCCACCGCTCTatcaa > 3:111606/1‑131 (MQ=255) gCTGTTTCTCGGCTATGCGGTGATGTTCTCCGAGCTGATCCTCGCACCTGTAACACCGTCCAACTCGGCGCGTGGTGCGGGGATTATCTATCCCATCATCCGTAACCTGCCACCGCTCTATCAATCACAACCAAACGa > 6:84218/1‑138 (MQ=255) gCTGTTTCTCGGCTATGCGGTGATGTTCTCCGAGCTGATCCTCGCACCTGTAACACCGTCCAACTCGGCGCGTGGTGCGGGGATTATCTATCCCATCATCCGTAACCTGCCACCGCTCTATCAATCACAACCAAACGa < 5:84218/138‑1 (MQ=255) tcGGCTATGCGGTGATGTTCTCCGAGCTGATCCTCGCACCTGTAACACCGTCCAACTCGGCGCGTGGTGCGGGGATtatctat > 2:182325/1‑83 (MQ=255) gCTATGCGGTGATGTTCTCCGAGCTGATCCTCGCACCTGTAACACCGTCCAACTCGGCGCGTGGTGCGGGGATTATCTATCCCATCATCCGTAACCTGCCACCGCTCTATCAATCACAACCAAACGACAGCAGTTCGCGCAGCATTGGc > 4:132870/1‑149 (MQ=255) cGGTGATGTTCTCCGAGCTGATCCTCGCACCTGTAACACCGTCCAACTCGGCGCGTGGTGCGGGGATTATCTATCCCATCATCCGTAACCTGCCACCGCTCTATCAATCACAACCAAACGACAGCAGTTCGCGCAGCATTGGCTCGTAc < 7:111751/149‑1 (MQ=255) gTTCTCCGAGCTGATCCTCGCACCTGTAACACCGTCCAACTCGGCGCGTGGTGCGGGGATTATCTATCCCATCATCCGTAACCTGCCACCGCTCTATCAATCACAACCAAACGACAGCAGTTCGCGCAGCATTGGCTCGTACATCAtgt > 6:119418/1‑149 (MQ=255) aGCTGATCCTCGCACCTGTAACACCGTCCAACTCGGCGCGTGGTGCGGggatcagctcggagaacatcaccgcatagccgagaaacagcgtgcgatgtcccatctttttc < 5:117155‑M2/110‑63 (MQ=255) aGCTGATCCTCGCACCTGTAACACCGTCCAACTCGGCGCGTGGTGCGGggatcagctcggagaacatcaccgcatagccgagaaacagcgtgcgatgtcccatctttttc > 6:117155‑M2/1‑48 (MQ=255) aTCCTCGCACCTGTAACACCGTCCAACTCGGCGCGTGGTGCGGggatcagctcggagaacatcaccgcatagccgagaaacagcgtgcgatgtcccatctttttcaccagaatcagcgcaatgcggcgtccaagcccggttttttcata < 3:102219‑M2/149‑107 (MQ=255) ccTCGCACCTGTAACACCGTCCAACTCGGCGCGTGGTGCGGggatcagctcggagaacatcaccgcatagccgagaaacagcgtgcgatgtcccatctttttcaccagaatcagcgcaatgcggcgtccaagcccggttttttcata > 5:96583‑M2/1‑41 (MQ=255) ccTCGCACCTGTAACACCGTCCAACTCGGCGCGTGGTGCGGggatcagctcggagaacatcaccgcatagccgagaaacagcgtgcgatgtcccatctttttcaccagaatcagcgcaatgcggcgtccaagcccggttttttcata < 6:96583‑M2/147‑107 (MQ=255) tGTAACACCGTCCAACTCGGCGCGTGGTGCGGGGATTATCTATCCCATCATCCGTAACCTGCCACCGCTCTATCAATCACAACCAAACGACAGCAGTTCGCGCAGCATTGGCTCGTACATCATGTGGATGGGGATTGTTGCCGACTGCg > 7:7334/1‑149 (MQ=255) aaCTCGGCGCGTGGTGCGGggatcagctcggagaacatcaccgcatagccgagaaacagcgtgcgatgtcccatctttttcaccagaatcagcgcaatgcggcgtccaagcccggttttttcatagcctgtgccaaacataaaggcggc > 4:102219‑M2/1‑19 (MQ=255) ggCGCGTGGTGCGGGGATTATCTATCCCATCATCCGTAACCTGCCACCGCTCTATCAATCACAACCAAACGACAGCAGTTCGCGCAGCATTGGCTCGTACATCATGTGGATGGGGATTGTTGCCGACTGCGTGACCAGCGCCATTTTCt < 5:119418/149‑1 (MQ=255) tgCGGGGATTATCTATACCATCATCCGTAACCTGCCACCGCTCTATCAATCACAACCAAACGACAGCAGTTCGCGCAGCATTGGCTCGTACATCATGTGGATGGGGATTGTTGCCGACTGCGTGACCAGCGCCATTTTCTTGACGGCGa < 3:132870/149‑1 (MQ=255) | GCTATGAAAAAACCGGGCTTGGACGCCGCATTGCGCTGATTCTGGTGAAAAAGATGGGACATCGCACGCTGTTTCTCGGCTATGCGGTGATGTTCTCCGAGCTGATCCTCGCACCTGTAACACCGTCCAACTCGGCGCGTGGTGCGGGGATTATCTATCCCATCATCCGTAACCTGCCACCGCTCTATCAATCACAACCAAACGACAGCAGTTCGCGCAGCATTGGCTCGTACATCATGTGGATGGGGATTGTTGCCGACTGCGTGACCAGCGCCATTTTCTTGACGGCGA > NC_000913/3208367‑3208657 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |