BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3888212	132 (1.390)	3 (0.030)	4/240	NT	2.3%	intergenic (+20/‑223)	mnmE/tnaC	tRNA U34 5‑methylaminomethyl‑2‑thiouridine modification GTPase/tryptophanase leader peptide
*	?	NC_000913	= 3888224	131 (1.510)	3 (0.030)	4/240	NT	2.3%	intergenic (+32/‑211)	mnmE/tnaC	tRNA U34 5‑methylaminomethyl‑2‑thiouridine modification GTPase/tryptophanase leader peptide
Rejected: Frequency below/above cutoff threshold.

Only 100 of 155 total aligned reads displayed.

CTGGGCAGGTGAACTGCTGGCGGAAGAGTTGCGTCTGGCACAGCAGAACTTAAGCGAAATCACCGGGGAATTTACTTCAGACGACCTGCTGGGGCGGATTTTCTCCAGCTTCTGTATTGGTAAGTAACCGCGCTTACGAAGCCGCA‑TTCTGACTGTCAGATGCGGCTTCGCTTCATTGTTACCACTCCTGTTATTCCTCAACCCTTTTTTTAAACATTAAAATTCTTACGTAATTTATAATCTTTAAAAAAAGCATTTAATATTGCTCCCCGAACGATTGTGATTCGATTCACAT  >  NC_000913/3888066‑3888360

cTGGGCAGGTGAACTGCTGGCGGAAGAGTTGCGTCTGGCACAGCAGAACTTAAGCGAAATCACCGGGGAATTTACTTCAGACGACCTGCTGGGGCGGATTTTCTCCAGCTTCTGTATTGGTAAGTAACCGCGCTTACGAAGCCGCA‑TTc                                                                                                                                                    <  3:381058/149‑1 (MQ=255)

        gTGAACTGCTGGCGGAAGAGTTGCGTCTGGCACAGCAGAACTTAAGCGAAATCACCGGGGAATTTACTTCAGACGACCTGCTGGGGCGGATTTTCTCTAGCTTCTGTATTGGTAAGTAACCGCGCTTACGAAGCCGCA‑TTCTGACTGt                                                                                                                                             >  5:212188/1‑148 (MQ=255)

        gTGAACTGCTGGCGGAAGAGTTGCGTCTGGCACAGCAGAACTTAAGCGAAATCACCGGGGAATTTACTTCAGACGACCTGCTGGGGCGGATTTTCTCCAGCTTCTGTATTGGTAAGTAACCGCGCTTACGAAGCCGCA‑TTCTGACTGTc                                                                                                                                            <  3:16479/149‑1 (MQ=255)

              tgctgGCGGAAGAGTTGCGTCTGGCACAGCAGAACTTAAGCGAAATCACCGGGGAATTTACTTCAGACGACCTGCTGGGGCGGATTTTCTCCAGCTTCTGTATTGGTAAGTAACCGCGCTTACGAAGCCGCA‑TTCTGACTGTCAGatgc                                                                                                                                      <  2:373311‑M2/149‑5 (MQ=255)

               gctgGCGGAAGAGTTGCGTCTGGCACAGCAGAACTTAAGCGAAATCACCGGGGAATTTACTTCAGACGACCTGCTGGGGCGGATTTTCTCCAGCTTCTGTATTGGTAAGTAACCGCGCTTACGAAGCCGCA‑TTCTGACt                                                                                                                                               >  1:113257/1‑139 (MQ=255)

               gctgGCGGAAGAGTTGCGTCTGGCACAGCAGAACTTAAGCGAAATCACCGGGGAATTTACTTCAGACGACCTGCTGGGGCGGATTTTCTCCAGCTTCTGTATTGGTAAGTAACCGCGCTTACGAAGCCGCA‑TTCTGACt                                                                                                                                               <  2:113257/139‑1 (MQ=255)

                 tgGCGGAAGAGTTGCGTCTGGCACAGCAGAACTTAAGCGAAATCACCGGGGAATTTACTTCAGACGACCTGCTGGGGCGGATTTTCTCCAGCTTCTGTATTGGTAAGTAACCGCGCTTACGAAGCCGCA‑TTCTGACTGt                                                                                                                                             <  2:250376/139‑1 (MQ=255)

                     ggAAGAGTTGCGTCTGGCACAGCAGAACTTAAGCGAAATCACCGGGGAATTTACTTCAGACGACCTGCTGGGGCGGATTTTCTCCAGCTTCTGTATTGGTAAGTAACCGCGCTTACGAAGCCGCA‑TTCTGACTGTCAGatgcggcttcg                                                                                                                               <  5:148185‑M2/149‑12 (MQ=255)

                       aaGAGTTGCGTCTGGCACAGCAGAACTTAAGCGAAATCACCGGGGAATTTACTTCAGACGACCTGCTGGGGCGGATTTTCTCCAGCTTCTGTATTGGTAAGTAACCGCGCTTACGAAGCCGCA‑TTCTGACTGTCAGATGCGgcttcgc                                                                                                                              <  8:185470/148‑1 (MQ=255)

                          agTTGCGTCTGGCACAGCAGAACTTAAGCGAAATCACCGGGGAATTTACTTCAGACGACCTGCTGGGGCGGATTTTCTCCAGCTTCTGTATTGGTAAGTAACCGCGCTTACGAAGCCGCA‑TTCTGACTGTCAGATGCGGCTTCGCTTCa                                                                                                                          <  7:132899/149‑1 (MQ=255)

                               cGTCTGGCACAGCATAACTTAAGCGAAATCACCGGGGAATTTACTTCAGACGACCTGCTGGGGCGGATTTTCTCCAGCTTCTGTATTGGTAAGTAACCGCGCTTACGAAGCCGCA‑TTCTGACTGTCAGATGCGGCTTCGCTTCATTGt                                                                                                                      <  6:26281/148‑1 (MQ=255)

                               cGTCTGGCACAGCAGAACTTAAGCGAAATCACCGGGGAATTTACTTCAGACGACCTGCTGGGGCGGATTTTCTCCAGCTTCTGTATTGGTAAGTAACCGCGCTTACGAAGCCGCA‑TTCTGACTGTCAGATGCGGCTTCGCTTCATTGtt                                                                                                                     <  7:107654/149‑1 (MQ=255)

                               cGTCTGGCACAGCAGAACTTAAGCGAAATCACCGGGGAATTTACTTCAGACGACCTGCTGGGGCGGATTTTCTCCAGCTTCTGTATTGGTAAGTAACCGCGCTTACGAAGCCGCA‑TTCTGACTGTCAGATGCGGCTTCGCTTCATTGtt                                                                                                                     <  4:305245/149‑1 (MQ=255)

                               cGTCTGGCACAGCAGAACTTAAGCGAAATCACCGGGGAATTTACTTCAGACGACCTGCTGGGGCGGATTTTCTCCAGCTTCTGTATTGGTAAGTAACCGCGCTTACGAAGCCGCA‑TTCTGACTGTCAGATGCGGCTTCGCTTCATTGtt                                                                                                                     <  4:119854/149‑1 (MQ=255)

                               cGTCTGGCACAGCAGAACTTAAGCGAAATCACCGGGGAATTTACTTCAGACGACCTGCTGGGGCGGATTTTCTCCAGCTTCTGTATTGGTAAGTAACCGCGCTTACGAAGCCGCA‑TTCTGACTGTCAGATGCGGCTTCGCTTCATTGt                                                                                                                      <  7:11725/148‑1 (MQ=255)

                                     gCACAGCAGAACTTAAGCGAAATCACCGGGGAATTTACTTCAGACGACCTGCTGGGGCGGATTTTCTCCAGCTTCTGTATTGGTAAGTAACCGCGCTTACGAAGCCGCA‑TTCTGACTGTCAGATGCGGCTTCGCTTCATTGTTACCACt                                                                                                               >  8:361293/1‑149 (MQ=255)

                                      cacaGCAGAACTTAAGCGAAATCACCGGGGAATTTACTTCAGACGACCTGCTGGGGCGGATTTTCTCCAGCTTCTGTATTGGTAAGTAACCGCGCTTACGAAGCCGCA‑TTCTGACTGTCAGATGCGGCTTCGCTTCATTGTTACCACTc                                                                                                              <  7:361293/149‑1 (MQ=255)

                                        cagcagAACTTAAGCGAAATCACCGGGGAATTTACTTCAGACGACCTGCTGGGGCGGATTTTCTCCAGCTTCTGTATTGGTAAGTAACCGCGCTTACGAAGCCGCA‑TTCTGACTGTCAGATGCGGCTTCGCTTCATTGTTACCACTCCt                                                                                                            <  2:74038/149‑1 (MQ=255)

                                            ctatcTTAAGCGATATCATCTGGGAATTTACTTCAGACGACCTGCTGCGGCGGATTTTCTCCAGCTTCTGTATTGGTACGTAACCGGGCTTACGAAGCCGCA‑TTCTGACTGTCTGATGCGGATTCGCTTCATTGTAACCACTCCTGTTa                                                                                                        <  8:328378/145‑1 (MQ=255)

                                                 ttAAGCGAAATCACCGGGGAATTTACTTCAGACGACCTGCTGGGGCGGATTTTCTCCAGCTTCTGTATTGGTAAGTAACCGCGCTTACGAAGCCGCA‑TTCTGACTGTCAGATGCGGCTTCGCTTCATTGTTACCACTCCTGTTATTCCt                                                                                                   >  5:140005/1‑149 (MQ=255)

                                                   aaGCGAAATCACCGGGGAATTTACTTCAGACGACCTGCTGGGGAGGATTTTCTCCAGCTTCTGTATTGGTAAGTAACCGCGCTTACGAAGCCGCA‑TTCTGACTGTCAGATGCGGCTTCGCTTCATTGTTACCACTCCTGTTATTCCTc                                                                                                  <  2:251294/148‑1 (MQ=255)

                                                     gCGAAATCACCGGGGAATTTACTTCAGACGACCTGCTGGGGCGGATTTTCTCCAGCTTCTGTATTGGTAAGTAACCGCGCTTACGAAGCCGCA‑TTCTGACTGTCAGATGCGGCTTCGCTTCATTGTTACCACTCCTGTTATTCCTCAAc                                                                                               >  4:70435/1‑149 (MQ=255)

                                                     gCGAAATCACCGGGGAATTTACTTCAGACGACCTGCTGGGGCGGATTTTCTCCAGCTTCTGTATTGGTAAGTAACCGCGCTTACGAAGCCGCA‑T‑CTGACAGTCAGaatgcggcttcgtaagcgcggttacttaccaatacagaagctgg                                                                                              >  8:28903‑M2/1‑105 (MQ=255)

                                                        aaaTCACCGGGGAATTTACTTCAGACGACCTGCTGGGGCGGATTTTCTCCAGCTTCTGTATTGGTAAGTAACCGCGCTTACGAAGCCGCA‑TTCTGACTGTCAGATGCGGCTTCGCTTCATTGTTACCACTCCTGTTATTCCTCAACCCt                                                                                            >  4:330381/1‑149 (MQ=255)

                                                         aaTCACCGGGGAATTTACTTCAGACGACCTGCTGGGGCGGATTTTCTCCAGCTTCTGTATTGGTAAGTAACCGCGCTTACGAAGCCGCA‑TTCTGACTGTCAGATGCGGCTTCGCTTCATTGTTACCACTCCTGTTATTCCTCAACCCtt                                                                                           >  7:36754/1‑149 (MQ=255)

                                                          aTCACAGGGGAATTTACTTCAGACGACCTGCTGGGGCGGATTTTCTCCAGCTTCTGTATTGGTAAGTACCCGCGCTTACGATGCCGCA‑TTCTGACTGTCAGATGCGGCTTCGCTTCATTGTTAGCAATCCTGTTATTGCTCAAcccagt                                                                                          >  6:90458/1‑146 (MQ=255)

                                                             aCCGGGGAATTTACTTCAGACGACCTGCTGGGGCGGATTTTCTCCAGCTTCTGTATTGGTAAGTAACCGCGCTTACGAAGCCGCA‑TTCTGACTGTCAGATGCGGCTTCGCTTCATTGTTACCACTCCTGTTATTCCTCAACCCtttttt                                                                                       <  3:70435/149‑1 (MQ=255)

                                                               cGGGGAATTTACTTCAGACGACCTGCTGGGGCGGATTTTCTCCAGCTTCTGTATTGGTAAGTAACCGCGCTTACGAAGCCGCA‑TTCTGACTGTCAGATGCGGCTTCGCTTCATTGTTACCACTc                                                                                                              >  2:423139/1‑124 (MQ=255)

                                                               cGGGGAATTTACTTCAGACGACCTGCTGGGGCGGATTTTCTCCAGCTTCTGTATTGGTAAGTAACCGCGCTTACGAAGCCGCA‑TTCTGACTGTCAGATGCGGCTTCGCTTCATTGTTACCACTCCTGTTATTCCTCAACCCttttttt                                                                                      >  8:254016/1‑148 (MQ=255)

                                                                 gggAATTTACTTCAGACGACCTGCTGGGGCGGATTTTCTCCAGCTTCTGTATTGGTAAGTAACCGCGCTTACGAAGCCGCATTctgactgtcagatgcggcttcgtaagcgcggttacttaccaatacagaa                                                                                                     >  5:254900‑M1/1‑83 (MQ=255)

                                                                 gggAATTTACTTCAGACGACCTGCTGGGGCGGATTTTCTCCAGCTTCTGTATTGGTAAGTAACCGCGCTTACGAAGCCGCATTctgactgtcagatgcggcttcgtaagcgcggttacttaccaatacagaa                                                                                                     <  6:254900‑M1/132‑50 (MQ=255)

                                                                 gggAATTTACTTCAGACGACCTGCTGGGGCGGATTTTCTCCAGCTTCTGTATTGGTAAGTAACCGCGCTTACGAAGCCGCA‑TTCTGACTGTCAGATGCGGCTTCGCTTCATTGTTACCACTCCTGTTATTCCTCa                                                                                                 <  2:92263/135‑1 (MQ=255)

                                                                      tttACTTCAGACGACCTGCTGGGGCGGATTTTCTCCAGCTTCTGTATTGGTAAGTAACCGCGCTTACGAAGCCGCA‑TTCTGACTGTCAGATGCGGCTTCGCTTCATTGTTACCACTCCTGTTATTCCTCAACCCTTTTTTTAAACAtt                                                                               >  2:218754/1‑148 (MQ=255)

                                                                      tttACTTCAGACGACCTGCTGGGGCGGATTTTCTCCAGCTTCTGTATTGGTAAGTAACCGCGCTTACGAAGCCGCA‑TTCTGACTGTCAGATGCGGCTTCGCTTCATTGTTACCACTCCTGTTATTCCTCAACCCTTTTTTTAAACAtt                                                                               >  5:310901/1‑148 (MQ=255)

                                                                         aCTTCAGACGACCTGCTGGGGCGGATTTTCTCCAGCTTCTGTATTGGTAAGTAACCGCGCTTACGAAGCCGCA‑TTCTGACTGTCAGATGCGGCTTCGCTTCATTGTTACCACTCCTGTTATTCCTc                                                                                                  <  6:286472/126‑1 (MQ=255)

                                                                         aCTTCAGACGACCTGCTGGGGCGGATTTTCTCCAGCTTCTGTATTGGTAAGTAACCGCGCTTACGAAGCCGCA‑TTCTGACTGTCAGATGCGGCTTCGCTTCATTGTTACCACTCCTGTTATTCCTc                                                                                                  >  5:286472/1‑126 (MQ=255)

                                                                           ttCAGACGACCTGCTGGGGCGGATTTTCTCCAGCTTCTGTATTGGTAAGTAACCGCGCTTACGAAGCCGCA‑TTCTGACTGTCAGATGCGGCTTCGCTTCATTGTTACCACTCCTGTTATTCCTCAACCCTTTTTTTAAACATTAAAAt                                                                          >  5:185968/1‑148 (MQ=255)

                                                                           ttCAGACGACCTGCTGGGGCGGATTTTCTCCAGCTTCTGTATTGGTAAGTAACCGCGCTTACGAAGCCGCA‑TTCTGACTGTCAGATGCGGCTTCGCTTCATTGTTACCACTCCTGTTATTCCTCAACCCTTTTTTTAAACATTAAAAt                                                                          >  3:154984/1‑148 (MQ=255)

                                                                              aGACGACCTGCTGGGGCGGATTTTCTCCAGCTTCTGTATTGGTAAGTAACCGCGCTTACGAAGCCGCA‑TTCTGACTGTCAGATGCGGCTTCGCTTCATTGTTACCACTCCTGTTATTCCTCAACCCTTTTTTTAAACATTAAAATTCt                                                                       <  2:431571/148‑1 (MQ=255)

                                                                                  gacCTGCTGGGGCGGATTTTCTCCAGCTTCTGTATTGGTAAGTAACCGCGCTTACGAAGCCGCA‑TTCTGACTGTCAGATGCGGCTTCGCTTCATTGTTACCACTCCTGTTATTCCTCAACCCttt                                                                                          <  1:205737/125‑1 (MQ=255)

                                                                                  gacCTGCTGGGGCGGATTTTCTCCAGCTTCTGTATTGGTAAGTAACCGCGCTTACGAAGCCGCA‑TTCTGACTGTCAGATGCGGCTTCGCTTCATTGTTACCACTCCTGTTATTCCTCAACCCTTTTTTTAAACATTAAAATTCTTa                                                                     <  3:251444/146‑1 (MQ=255)

                                                                                   acCTGCTGGGGCGGATTTTCTCCAGCTTCTGTATTGGTAAGTAACCGCGCTTACGAAGCCGCA‑TTCTGACTGTCAGATGCGGCTTCGCTTCATTGTTACCACTCCTGTTATTCCTCAACCCtttt                                                                                         <  6:239461/125‑1 (MQ=255)

                                                                                     ctgctgGGGCGGATTTTCTCCAGCTTCTGTATTGGTAAGTAACCGCGCTTACGAAGCCGCA‑TTCTGACTGTCAGATGCGGCTTCGCTTCATTGTTACCACTCCTGTTATTCCTCAACCCTTTTTTTAAACATTAAAATTCTTACGTAAt                                                               <  7:254016/149‑1 (MQ=255)

                                                                                     ctgctgGGGCGGATTTTCTCCAGCTTCTGTATTGGTAAGTAACCGCGCTTACGAAGCCGCA‑TTCTGACTGTCAGATGCGGCTTCGCTTCATTGTAACCACTCCTGTTATTCCTCAACCCTTTTTTTAAACATTAAAATTCTTACGTAAt                                                               <  1:54220/149‑1 (MQ=255)

                                                                                      tgctgGGGCGGATTTTCTCCAGCTTCTGTATTGGTAAGTAACCGCGCTTACGAAGCCGCA‑TTCTGACTGTCAGATGCGGCTTCGCTTCATTGTTACCACTCCTGTTATTCCTCAACCCTTTTTTTAAACATTAAAATTCTTACGTAAtt                                                              >  8:26204/1‑149 (MQ=255)

                                                                                        ctgGGGCGGATTTTCTCCAGCTTCTGTATTGGTAAGTAACCGCGCTTACGAAGCCGCA‑TTCTGACTGTCAGATGCGGCTTCGCTTCATTGTTACCACTCCTGTTATTCCTCAACCCTTTTTTTAAACATTAAAATTCTTACGTAATTta                                                            >  6:209744/1‑149 (MQ=255)

                                                                                           gggCGGATTTTCTCCAGCTTCTGTATTGGTAAGTAACCGCGCTTACGAAGCCGCA‑TTCTGACTGTCAGATGCGGCTTCGCTTCATTGTTACCACTCCTGTTATTCCTc                                                                                                  >  4:27033/1‑108 (MQ=255)

                                                                                             gCGGATTTTCTCCAGCTTCTGTATTGGTAAGTAACCGCGCTTACGAAGCCGCA‑TTCTGACTGTCAGATGCGGCTTCGCTTCATTGTTACCACTCCTGTTATTCCTCAACCCTTTTTTTAAACATTAAAATTCTTACGTAATTTATAATc                                                       >  2:213541/1‑149 (MQ=255)

                                                                                              cGGATTTTCTCCAGCTTCTGTATTGGTAAGTAACCGCGCTTACGAAGCCGCA‑TTCTGACTGTCAGATGCGGCTTCGCTTCATTGTTACCACTCCTGTTATTCCTCAACCCTTTTTTTAAACATTAAAATTCTTACGTAATTTATAATCt                                                      <  7:26204/149‑1 (MQ=255)

                                                                                              cGGATTTTCTCCAGCTTCTGTATTGGTAAGTAACCGCGCTTACGAAGCCGCA‑TTCTGACTGTCAGATGCGGCTTCGCTTCATTGTTACCACTCCTGTTATTCCTCAACCCTTTTTTTAAACATTAAAATTCTTACGTAATTTATAATCt                                                      >  1:120388/1‑149 (MQ=255)

                                                                                                gATTTTCTCCAGCTTCTGTATTGGTAAGTAACCGCGCTTACGAAGCCGCA‑TTCTGACTGTCAGATGCGGCTTCGCTTCATTGTTACCACTCCTGTTATTCCTCAACCCTTTTTTTAAACATTAAAATTCTTACGTAATTTATAATCttt                                                    <  1:24348/149‑1 (MQ=255)

                                                                                                 aTTTTCTCCAGCTTCTGTATTGGTAAGTAACCGCGCTTACGAAGCCGCA‑TTCTGACTGTCAGATGCGGCTTCGCTTCATTGTTACCACTCCTGTTATTCCTCAACCCTTTTTTTAAACATTAAAATTCTTACGTAATTTATAATCtgt                                                    >  6:23727/1‑146 (MQ=255)

                                                                                                  ttttCTCCAGCTTCTGTATTGGTAAGTAACCGCGCTTACGAAGCCGCA‑TTCTGACTGTCAGATGCGGCTTCGCTTCATTGTTACCACTCCTGTTATTCCTCAACCCTTTTTTTAAACATTAAAATTCTTACGTAATTTATAATCTTTaa                                                  <  7:76240/149‑1 (MQ=255)

                                                                                                  ttttCTCCAGCTTCTGTATTGGTAAGTAACCGCGCTTACGAAGCCGCA‑TTCTGACTGTCAGATGCGGCTTCGCTTCATTGTTACCACTCCTGTTATTCCTCAACCCTTTTTTTAAACATTAAAATTCTTACGTAATTTATAATCTTTa                                                   >  1:804/1‑148 (MQ=255)

                                                                                                   tttCTCCAGCTTCTGTATTGGTAAGTAACCGCGCTTACGAAGCCGCA‑TTCTGACTGTCAGATGCGGCTTCGCTTCATTGTTACCACTCCTGTTATTCCTCAACCCTTTTTTTAAACATTAAAATTCTTACGTAATTTATAATCTTTaa                                                  >  4:252269/1‑148 (MQ=255)

                                                                                                       tcCAGCTTCTGTATTGGTAAGTAACCGCGCTTACGAAGCCGCA‑TTCTGACTGTCAGATGCGGCTTCGCTTCATTGTTACCACTCCTGTTATTCCTCAACCCTTTTTTTAAACATTAAAATTCTTACGTAATTTATAATCTTTaaaaa                                               >  2:106621/1‑147 (MQ=255)

                                                                                                        ccAGCTTCTGTATTGGTAAGTAACCGCGCTTACGAAGCCGCATTctgactgtcagatgcggcttcgtaagcgcggttacttaccaatacagaagctggagaaaatccgccccagcaggtcgtctgaagtaaattccccggtgatttcgc                                             >  8:28903‑M1/1‑44 (MQ=255)

                                                                                                        ccAGCTTCTGTATTCGTAAGTAACCGCGCTTACGAAGCCGCA‑TTCTGACTGTCAGATGCGGCTTCGCTTCATTGTTACCACTCCTGTTATTACTCAACCCTTTTTTTAAACATTAAAATTCTTACGTAATTTATAATATTTaaaaa                                               >  6:5716/1‑146 (MQ=255)

                                                                                                         cAGCTTCTGTATTTGTAAGTAACCGCGCTTACGAAGCCGCA‑TTCTGACTGTCAGATGCGGCTTCGCTTCATTGTTACCACTCCTGTTATTCCTCAACCCTTTTTTTAAACATTAAAATTCTTACGTAATTTATAATCTTTaaaaaaa                                             <  7:162704/147‑1 (MQ=255)

                                                                                                         cAGCTTCTGTATTGGTAAGTAACCGCGCTTACGAAGCCGCA‑TTCTGACTGTCAGATGCGGCTTCGCTTCATTGTTACCACTCCTGTTATTCCTCAACCCTTTTTTTAAACATTAAAATTCTTACGTAATTTATAATCTTTaaaaaaa                                             <  1:30558/147‑1 (MQ=255)

                                                                                                           gCTTCTGTATTGGTAAGTAACCGCGCTTACGAAGCCGCA‑TTCTGACTGTCAGATGCGGCTTCGCTTCATTGTTACCACTCCTGTTATTCCTCAACCCTTTTTTTAAACATTAAAATTCTTACGTAATTTATAATCTTTAAAAAAAGCAt                                         <  3:252269/149‑1 (MQ=255)

                                                                                                             ttCTGTATTGGTAAGTAACCGCGCTTACGAAGCCGCA‑T‑CTGACAGTCAGaatgcggcttcgtaagcgcggttacttaccaatacagaagctggagaaaatccgccccagcaggtcgtctgaagtaaattccc                                                       >  5:254900‑M2/1‑49 (MQ=255)

                                                                                                             ttCTGTATTGGTAAGTAACCGCGCTTACGAAGCCGCA‑T‑CTGACAGTCAGaatgcggcttcgtaagcgcggttacttaccaatacagaagctggagaaaatccgccccagcaggtcgtctgaagtaaattccc                                                       <  6:254900‑M2/132‑84 (MQ=255)

                                                                                                                tGTATTGGTAAGTAACCGCGCTTACGAAGCCGCA‑TTCTGACTGTCAGATGCGGCTTCGCTTCATTGTTACCACTCCTGTTATTCCTCAACCCTTTTTTTAAACATTAAAATTCTTACGTAATTTATAATCTTTAAAAAAAGCATTTaa                                     >  5:273837/1‑148 (MQ=255)

                                                                                                                  tATTGGTAAGTAACCGCGCTTACGAAGCCGCA‑TTCTGACTGTCAGATGCGGCTTCGCTTCTTTGTTACCACTCCTGGTAATCCACAACCCTGTTTTGAAACATTAAAATTCTTACGTAAGTTATATTCTTTAAATAAAGCATTTAatat                                  >  4:18015/1‑149 (MQ=255)

                                                                                                                  tATTGGTAAGTAACCGCGCTTACGAAGCCGCA‑TTCTGACTGTCAGATGCGGCTTCGCTTCATTGATACCCCTCCTGTTATTCCTCAACCCTTTTTTTAAACATTAAAATTCTTACGTAATTTATAATCTTTAAAAAAAGCATTTaa                                     <  6:313583/146‑1 (MQ=255)

                                                                                                                  tATTGGTAAGTAAACGCGCTTACGAAGCCTCA‑TTCTGACTGTCATATGCTGCTTCGCTTCAATGTTACCACTCCTTTTATTCCTCAACCCTTTTTTTAAACATTAAAATTCTTACGTAATTTATAATCTTTAAAAAAAGCATTTAatat                                  <  5:399848/149‑1 (MQ=255)

                                                                                                                    ttGGTAAGTAACCGCGCTTACGAAGCCGCA‑TTCTGACTGTCAGATGCGGCTTCGCTTCATTGTTACCACTCCTGTTATTCCTCAACCCTTTTTTTAAACATTAAAATTCTTACGTAATTTATAATCTTTAAAAAAAGCATTTAATATTg                                <  4:154984/149‑1 (MQ=255)

                                                                                                                     tGGTAAGTAACCGCGCTTACGAAGCCGCA‑TTCTGACTGTCAGATGCGGCTTCGCTTCATTGTTACCACTCCTGTTATTCCTCAACCCTTTTTTTAAACATTAAAATTCTTACGTAATTTATAATCTTTAAAAAAAGCATTTAATATTGc                               >  3:73692/1‑149 (MQ=255)

                                                                                                                       gtaagtaaCCGCGCTTACGAAGCCGCA‑TTCTGACTGTCAGATGCGGCTTCGCTTCATTGTTACCACTCCTGTTATTCCTCAACCCTTTTTTTAAACATTAAAATTCt                                                                       <  2:286074/107‑1 (MQ=255)

                                                                                                                       gtaagtaaCCGCGCTTACGAAGCCGCA‑TTCTGACTGTCAGATGCGGCTTCGCTTCATTGTTACCACTCCTGTTATTCCTCAACCCTTTTTTTAAACATTAAAATTCTTACGTAATTTATAATCTTTaaaaaaa                                             <  7:161810/133‑1 (MQ=255)

                                                                                                                       gtaagtaaCCGCGCTTACGAAGCCGCA‑TTCTGACTGTCAGATGCGGCTTCGCTTCATTGTTACCACTCCTGTTATTCCTCAACCCTTTTTTTAAACATTAAAATTCTTACGTAATTTATAATCTTTaaaaaaa                                             >  8:161810/1‑133 (MQ=255)

                                                                                                                       gtaagtaaCCGCGCTTACGAAGCCGCA‑TTCTGACTGTCAGATGCGGCTTCGCTTCATTGTTACCACTCCTGTTATTCCTCAACCCTTTTTTTAAACATTAAAATTCTTACGTAATTTATAATCTTTAAAAAAAGCATTTAATATTGCTc                             >  6:271744/1‑149 (MQ=255)

                                                                                                                       ctacgtaaCCGCGCTTACGAAGCCGCA‑TTCTGACTGTCAGAGGCGGCTTCGCTTCATTGTTACCACTCCTGTTATTCCTCAACCCTTTTTTTAAAGATTAAAATTCTTACGTAATTTATAATCTTTAAAAAAAGCATTTAATATTGCt                              <  2:337491/144‑1 (MQ=255)

                                                                                                                        taagtaaCCGCGCTTACGAAGCCGCA‑TTCTGACTGTCAGATGCGGCTTCGCTTCATTGTTACCACTCCTGTTATTCCTCAACCCTTTTTTTAAACATTAAAATTCTTACGTAATTTATAATCTTTAAAAAAAGCATTTAATATTGCTcc                            >  3:225493/1‑149 (MQ=255)

                                                                                                                         aagtaaCCGCGCTTACGAAGCCGCA‑TTCTGACTGTCAGATGCGGCTTCGCTTCATTGTTACCACTCCTGTTATTCCTCAACCCTTTTTTTAAACATTAAAATTCTTACGTAATTTATAATCTTTAAAAAAAGCATTTAATATTgatacc                           >  7:283979/1‑144 (MQ=255)

                                                                                                                          agtaaCCGCGCTTACGAAGCCGCA‑TTCTGACTGTCAGATGCGGCTTCGCTTCATTGTTACCACTCCTGTTATTCCTCAACCCTTTTTTTAAACATTAAAATTCTTACGTAATTTATAATCTTTAAAAAAAGCATTTAATATTGCTcccc                          >  2:339962/1‑149 (MQ=255)

                                                                                                                          agtaaCCGCGCTTACGAAGCCGCA‑TTCTGACTGTCAGATGCGGCTTCGCTTCATTGTTACCACTCATGTTATTCCTCAACCCTGTTTTTAAACATTAAAATTCTTACGTAATTTATAATCTTTAAAAAAAGAATTTAATATTTCtacac                          >  7:304465/1‑145 (MQ=255)

                                                                                                                              aCCGCGCTTACGAAGCCGCA‑TTCTGACTGTCAGATGCGGCTTCGCTTCATTGTTACCACTCCTGTTATTCCTCAACCCtttttt                                                                                       >  6:189041/1‑84 (MQ=255)

                                                                                                                              aCCGCGCTTACGAAGCCGCA‑TTCTGACTGTCAGATGCGGCTTCGCTTCATTGTTACCACTCCTGTTATTCCTCAACCCTTTTTTTAAACATTAAAATTCTTACGTAATTTATAATCTTTAAAAAAAGCATTTAATATTGCTCCCCGaa                       <  3:330381/148‑1 (MQ=255)

                                                                                                                              aCCGCGCTTACGAAGCCGCA‑TTCTGACTGTCAGATGCGGCTTCGCTTCATTGTTACCACTCCTGTTATTCCTCAACCCTTTTTTTAAACATTAAAATTCTTACGTAATTTATAATCTTTAAAAAAAGCATTTAATATTGCTCCCCGAAc                      >  5:212793/1‑149 (MQ=255)

                                                                                                                               ccGCGCTTACGAAGCCGCA‑TTCTGACTGTCAGATGCGGCTTCGCTTCATTGTTACCACTCCTGTTATTCCTCAACCCTTTTTTTAAACATTAAAATTCTTACGTAATTTATAATCTTTAAAAAAAGCATTTAATATTGCTCCCCGAAc                      >  1:283810/1‑148 (MQ=255)

                                                                                                                               ccGCGCTTACGAAGCCGCA‑TTCTGACTGTCAGATGCGGCTTCGCTTCATTGTTACCACTCCTGTTATTCCTCAACCCTTTTTTTAAACATTAAAATTCTTACGTAATTTATAATCTTTAAAAAAAGCATTTAATATTGCTCCCCGAAc                      >  6:51022/1‑148 (MQ=255)

                                                                                                                                    cTTACGAAGCCGCATTctgactgtcagatgcggcttcgtaagcgcggttacttaccaatacagaagctggagaaaatccgccccagcaggtcgtctgaagtaaattccccggtgatttcgcttaagttctgctgtgccagacgcaactc                 <  7:28903‑M1/149‑134 (MQ=255)

                                                                                                                                     ttACGAAGCCGCA‑TTCTGACTGTCAGATGCGGCTTCGCTTCATTGTTACCACTCCTGTTATTCCTCAACCCTTTTTTTAAACATTAAAATTCTTACGTAATTTATAATCTTTAACAAAAGAATTTAATATTGCTCCCCGAACGATtgt                >  5:84583/1‑148 (MQ=255)

                                                                                                                                     ttACGAAGCCGCA‑TTCTGACTGTCAGATGCGGCTTCGCTTCATTGTTACCACTCCTGTTATTCCTCAACCCTTTTTTTAAACATTAAAATTCTTACGTAATTTATAATCTTTAAAAAAAGCATTTAATATTGCTCCCCGAACGATtgt                >  8:185580/1‑148 (MQ=255)

                                                                                                                                     ttACGAAGCCGCA‑TTCTGACTGTCAGATGCGGCTTCGCTTCATTGTTACCACTCCTGTTATTCCTCAACCCTTTTTTTAAACATTAAAATTCTTACGTAATTTATAATCTTTAAAAAAAGCATTTAATATTGCTCCCCGAACGATtgt                >  1:268188/1‑148 (MQ=255)

                                                                                                                                       aCGAAGCCGCA‑TTCTGACTGTCAGATGCGGCTTCGCTTCATTGTTACCACTCCTGTTATTCCTCAACCCTTTTTTTAAACATTAAAATTCTTACGTAATTTATAATCTTTAAAAAAAGCATTTAATATTGCTCCCCGAACGATtgtg               <  6:291051/147‑1 (MQ=255)

                                                                                                                                       aCGAAGCCGCA‑TTCTGACTGGCAGCTGCGGCTGCGCTTCATTGTTACCACTCCTGTTATTCCTCAACCCTTTTTTTAAACATTAAAATTCTTACGTAATTTATAATCTTTAAAAAAAGCATTTAATATTGCTCCCCGAACGATtggg               <  4:209563/147‑3 (MQ=255)

                                                                                                                                       aCGAAGCCGCA‑TGCTGAATGTCAGATGCGGCTTCGCTTCATTGTTACCACTCCTGTTATTCCTCAACCCTTTTTTTAAACATTAAAATTCTTACGTAATTTATAATCTTTAAAAAAAGCATTTAATATTGCTCCCCGAACGATTGTga              <  2:381296/148‑1 (MQ=255)

                                                                                                                                        cGAAGCCGCA‑Tctgacagtcagaatgcggcttcgtaagcgcggttacttaccaatacagaagctggagaaaatccgccccagcaggtcgtctgaagtaaattccccggtgatttcgcttaagttctgctgtgccagacgcaactcttcc            <  5:148185‑M1/149‑139 (MQ=255)

                                                                                                                                        cGAAGCCGCA‑TTCTGACTGTCAGATGCGGCTTCGCTTCATTGTTACCACTCCTGTTATTCCTCAACCCTTTTTTTAAACATTAAAATTCTTACGTAATTTATAATCTTTAAAAAAAGCATTTAATATTGCTCCCCGAACGATTGTgatt            <  4:247070/149‑1 (MQ=255)

                                                                                                                                           agcagcA‑TTCTGACTGTCAGATGCGGCTTCGCTTCATTGTTACCACTCCTGTTATTCCTCAACCCTTTTTTTAAACATTAAAATTCTTACGTAATTTATAATCTTTAAAAAAAGCATTTAATATTGCTCCCCTAACGATTGTgattcga         <  1:329317/149‑1 (MQ=255)

                                                                                                                                           aGCCTCA‑TTCTGACTGTCAGATGCTGCTTCGCTTCATTGTTACCACTCCTGTTATTCCTCAACCCTTTTTTTAAACATTAAAATTCTTACGTAATTTATAATCTTTAAAAAAAGCATTTAATATTGCTCCCCGAACGATTGTgattcga         <  1:373311/149‑1 (MQ=255)

                                                                                                                                           aGCCGCA‑TTCTGACTGTCAGATGCGGCTTCGCTTCATTGTTACCACTCCTGTTATTCCTCAACCCTTTTTTTAAACATTAAAATTCTTACGTAATTTATAATCTTTAAAAAAAGCATTTAATATTGCTCCCCGAACGATTGTgattcga         >  8:43137/1‑149 (MQ=255)

                                                                                                                                              cGCA‑TTCTGACTGTCAGATGCGGCTTCGCTTCATTGTTACCACTCCTGTTATTCCTCAACCCTTTTTTTAAACATTAAAATTCTTACGTAATTTATAATCTTTAAAAAAAGCATTTAATATTGCTCCCCGAACGATTGTgattcgattc      <  8:109189/149‑1 (MQ=255)

                                                                                                                                              cGCA‑TTCTGACTGTCAGATGCGGCTTCGCTTCATTGTTACCACTCCTGTTATTCCTCAACCCTTTTTTTAAACATTAAAATTCTTACGTAATTTATAATCTTTAAAAAAAGCATTTAATATTGCTCCCCGAACGATTGTgattcgattc      <  7:200125/149‑1 (MQ=255)

                                                                                                                                               gCA‑TTCTGACTGTCAGATGCGGCTTCGCTTCATTGTTACCACTCCTGTTATTCCTCAACCCTTTTTTTAAACATTAAAATTCTTACGTAATTTATAATCTTTAAAAAAAGCATTTAATATTGCTCCCCGAACGATTGTGATTCGATTca     >  1:24101/1‑149 (MQ=255)

                                                                                                                                                   ttCTGACTGTCAGATGCGGCTTCGCTTCATTGTTACCACTCCTGTTATTCCTCAACCCTTTTTTTAAACATTAAAATTCTTACGTAATTTATAATCTTTAAAAAAAGCATTTAATATTGCTCCCCGAACGATTGTGATTCGATTCACAt  >  7:325362/1‑149 (MQ=255)

                                                                                                                                                   tctgacagtcagaatgcggcttcgtaagcgcggttacttaccaatacagaagctggagaaaatccgccccagcaggtcgtctgaagtaaattccccggtgatttcgcttaagttctgctgtgccagacgcaactcttccgccagcagtt  >  1:210088‑M1/1‑1 (MQ=255)

CTGGGCAGGTGAACTGCTGGCGGAAGAGTTGCGTCTGGCACAGCAGAACTTAAGCGAAATCACCGGGGAATTTACTTCAGACGACCTGCTGGGGCGGATTTTCTCCAGCTTCTGTATTGGTAAGTAACCGCGCTTACGAAGCCGCA‑TTCTGACTGTCAGATGCGGCTTCGCTTCATTGTTACCACTCCTGTTATTCCTCAACCCTTTTTTTAAACATTAAAATTCTTACGTAATTTATAATCTTTAAAAAAAGCATTTAATATTGCTCCCCGAACGATTGTGATTCGATTCACAT  >  NC_000913/3888066‑3888360

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 21 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.