New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3879653 =119 (1.260)3 (0.030) 3/252 NT 2.6% coding (467/2415 nt) gyrB DNA gyrase, subunit B
?NC_000913 3879674 = 111 (1.220)coding (446/2415 nt) gyrB DNA gyrase, subunit B
Rejected: Frequency below/above cutoff threshold.

Only 100 of 134 total aligned reads displayed.

GAGGAACGACAACTCACGCAGACGTTTCGCCAGAATTTCATATTCGAACTCGGTCACATTGGTGAAGGTTTCGAGGCTGGGCCAGAAACGCACCATGGTGCCGGTTTTTTCAGTCTCGCCGGTAACCGCCAGCGGGGCCTGCGGTACACCGTGTTCGTAGATCTGACGGTGAATTTTACCCTCGCGCTGGATAACCAGCTCCAGTTTTTGCGACAGGGCGTTTACTACCGAAACACCAACGCCGTGCAGACCGCCGGACACTTTATAGGAGTTATCGTCAAATTTACCG  >  NC_000913/3879529‑3879817
                                                                                                                                                 |                                                                                                                                               
gAGGAACGACAACTCACGCAGACGTTTCGCCAGAATTTCATATTCGAACTCGGTCACATTGGTGAAGGTTTCGAGGCTGGGCCAGAAACGCACCATGGTGCCGGTTTTTTCAGTCTCGCCGGTAACCGCCAGCGGGGCCTGCGGTacac                                                                                                                                              >  8:422285/1‑149 (MQ=255)
gAGGAACGACAACTCACGCAGACGTTTCGCCAGAATTTCATATTCGAACTCGGTCACATTGGTGAAGGTTTCGAGGCTGGGCCAGAAACGCACCATGGTGCCGGTTTTTTCAGTCTCGCCGGTAACCGCCAGCGGGGCCTGCGGTacac                                                                                                                                              >  8:283311/1‑149 (MQ=255)
gAGGAACGACAACTCACGCAGACGTTTCGCCAGAATTTCATATTCGAACTCGGTCACATTGGTGAAGGTTTCGAGGCTGGGCCAGAAACGCACCATGGTGCCGGTTTTTTCAGTCTCGCCGGTAACCGCCAGCGGGGCCTGCGGTaca                                                                                                                                               <  5:420195/148‑1 (MQ=255)
    aaCGACAACTCACGCAGCCGTTTCGCCAGAATTTCATATTCGAACTCGGTCACATTGGTGAAGGTTTCGAGGCTGGGCCAGAAACGCACCATGGTGCCGGTTTTTTCAGTCTCGCCGGTAACCGCCAGCGGGGCCTGCGGTACACCgtg                                                                                                                                          >  3:164571/1‑149 (MQ=255)
     aCGACAACTCACGCAGACGTTTCGCCAGAATTTCATATTCGAACTCGGTCACATTGGTGAAGGTTTCGAGGCTGGGCCAGAAACGCACCATGGTGCCGGTTTTTTCAGTCTCGCCGGTAACCGCCAGCGGGGCCTGCGGTACACCgtgt                                                                                                                                         <  4:285827/149‑1 (MQ=255)
     aCGACAACTCACGCAGACGTTTCGCCAGAATTTCATATTCGAACTCGGTCACATTGGTGAAGGTTTCGAGGCTGGGCCAGAAACGCACCATGGTGCCGGTTTTTTCAGTCTCGCCGGTAACCGCCAGCGGGGCCTGCGGTACACCgtgt                                                                                                                                         <  5:196841/149‑1 (MQ=255)
       gACAACTCACGCAGACGTTTCGCCAGAATTTCATATTCGAACTCGGTCACATTGGTGAAGGTTTCGAGGCTGGGCCAGAAACGCACCATGGTGCCGGTTTTTTCAGTCTCGCCGGTAACCGCCAGCGGGGCCTGCGGTACACCgt                                                                                                                                           <  6:351927/145‑1 (MQ=255)
       gACAACTCACGCAGACGTTTCGCCAGAATTTCATATTCGAACTCGGTCACATTGGTGAAGGTTTCGAGGCTGGGCCAGAAACGCACCATGGTGCCGGTTTTTTCAGTCTCGCCGGTAACCGCCAGCGGGGCCTGCGGTACACCGTGTTc                                                                                                                                       <  3:198018/149‑1 (MQ=255)
         cAACTCACGCAGACGTTTCGCCAGAATTTCATATTCGAACTCGGTCACATTGGTGAAGGTTTCGAGGCTGGGCCAGAAACGCACCATGGTGCCGGTTTTTTCAGTCTCGCCGGTAACCGCCAGCGGGGCCTGCGGTACACCGTGTTCg                                                                                                                                      >  3:348735/1‑148 (MQ=255)
           aCTCACGCAGACGTTTCGCCAGAATTTCATATTCGAACTCGGTCACATTGGTGAAGGTTTCGAGGCTGGGCCAGAAACGCACCATGGTGCCGGTTTTTTCAGTCTCGCCGGTAACCGCCAGCGGGGCCTGCGGTACACCGTGTTCg                                                                                                                                      >  3:349934/1‑146 (MQ=255)
           aCTCACGCAGACGTTTCGCCAGAATTTCATATTCGAACTCGGTCACATTGGTGAAGGTTTCGAGGCTGGGCCAGAAACGCACCATGGTGCCGGTTTTTTCAGTCTCGCCGGTAACCGCCAGCGGGGCCTGCGGTACACCGTGTTCGTAg                                                                                                                                   <  1:241786/149‑1 (MQ=255)
             tCACGCAGACGTTTCGCCAGAATTTCATATTCGAACTCGGTCACATTGGTGAAGGTTTCGAGGCTGGGCCAGAAACGCACCATGGTGCCGGTTTTTTCAGTCTCGCCGGTAACCGCCAGCGGGGCCTGCGGTACACCGTGTTCg                                                                                                                                      >  1:79390/1‑144 (MQ=255)
               aCGCAGACGTTTCGCCAGAATTTCATATTCGAACTCGGTCACATTGGTGAAGGTTTCGAGGCTGGGCCAGAAACGCACCATGGTGCCGGTTTTTTCAGTCTCGCCGGTAACCGCCAGCGGGGCCTGCGGTACACCGTGTTCGTAGATc                                                                                                                                <  4:163015/148‑1 (MQ=255)
                 gCAGACGTTTCGCCAGAATTTCATATTCGAACTCGGTCACATTGGTGAAGGTTTCGAGGCTGGGCCAGAAACGCACCATGGTGCCGGTTTTTTCAGTCTCGCCGGTAACCGCCAGCGGGGCCTGCGGTACACCGTGTTCGTAGATCTGa                                                                                                                             >  6:261106/1‑149 (MQ=255)
                 gCAGACGTTTCGCCAGAATTTCATATTCGAACTCGGTCACATTGGTGAAGGTTTCGAGGCTGGGCCAGAAACGCACCATGGTGCCGGTTTTTTCAGTCTCGCCGGTAACCGCCAGCGGGGCCTGCGGTACACCGTGTTCGTAGATCTGa                                                                                                                             <  2:301755/149‑1 (MQ=255)
                  cAGACGTTTCGCCAGAATTTCATATTCGAACTCGGTCACATTGGTGAAGGTTTCGAGGCTGGGCCAGAAACGCACCATGGTGCCGGTTTTTTCAGTCTCGCCGGTAACCGCCAGCGGGGCCTGCGGTACACCGTGTTCGTAGATCTGAc                                                                                                                            <  5:125231/149‑1 (MQ=255)
                   aGACGTTTCGCCAGAATTTCATATTCGAACTCGGTCACATTGTTGAAGGTTTCGAGGCTGGGCCAGAAACGCACCATGGTGCCGGGTTTTTCAGTCTCGCCGGTAACCGCCAGCGGGGCCTGCGGTACACCGTGTTCGTAGATCTGACg                                                                                                                           <  1:49626/149‑1 (MQ=255)
                     aCGTTTCGCCAGAATTTCATATTCGAACTCGGTCACATTGGTGAAGGTTTCGAGGCTGGGCCATAAACGCACCATGGTGCCGGTTTTTTCAGTCTCGCCGGTAACCGCCAGCGGGGCCTGCGGTACACCGTGTTCGTAGATCTGACGGt                                                                                                                         <  8:274762/149‑1 (MQ=255)
                        tttCGCCAGAATTTCATATTCGAACTCGGTCACATTGGTGAAGGTTTCGAGGCTGGGCCAGAAACGCACCATGGTGCCGGTTTTTTCAGTCTCGCCGGTAACCGCCAGCGGGGCCTGCGGTACACCGTGTTCGTAGATCTGACGGTGaa                                                                                                                      >  3:378134/1‑149 (MQ=255)
                            gCCAGAATTTCATATTCGAACTCGGTCACATTGGTGAAGGTTTCGAGGCTGGGCCAGAAACGCACCATGGTGCCGGTTTTTTCAGTCTCGCCGGTAACCGCCAGCGGGGCCTGCGGTACACCGTGTTCGTAGATCTGACGGTGAAttt                                                                                                                   <  1:174559/148‑1 (MQ=255)
                            gCCAGAATTTCATATTCGAACTCGGTCACATTGGTGAAGGTTTCGAGGCTGGGCCAGAAACGCACCATGGTGCCGGTTTTTTCAGTCTCGCCGGTAACCGCCAGCGGGGCCTGCGGTACACCGTGTTCGTAGATCTGACGGTGAAttt                                                                                                                   <  7:432368/148‑1 (MQ=255)
                             ccAGAATTTCATATTCGAACTCGGTCACATTGGTGAAGGTTTCGAGGCTGGGCCAGAAACGCACCATGGTGCCGGTTTTTTCAGTCTCGCCGGTAACCGCCAGCGGGGCCTGCGGTACACCGTGTTCGt                                                                                                                                     <  2:217846/129‑1 (MQ=255)
                             ccAGAATTTCATATTCGAACTCGGTCACATTGGTGAAGGTTTCGAGGCTGGGCCAGAAACGCACCATGGTGCCGGTTTTTTCAGTCTCGCCGGTAACCGCCAGCGGGGCCTGCGGTACACCGTGTTCGt                                                                                                                                     >  1:217846/1‑129 (MQ=255)
                             ccAGAATTTCATATTCGAACTCGGTCACATTGGTGAAGGTTTCGAGGCTGGGCCAGAAACGCACCATGGTGCCGGTTTTTTCAGTCTCGCCGGTAACCGCCAGCGGGGCCTGCGGTACACCGTGTTCGTAGATCTGACGGTGAATTTTa                                                                                                                 >  4:215174/1‑149 (MQ=255)
                              cAGAATTTCATATTCGAACTCGGTCACATTGGTGAAGGTTTCGAGGCTGGGCCAGAAACGCACCATGGTGCCGGTTTTTTCAGTCTCGCCGGTAACCGCCAGCGGGGCCTGCGGTACACCGTGTTCGTAGATCTGACGGTGAAt                                                                                                                     <  4:98271/144‑1 (MQ=255)
                              cAGAATTTCATATTCGAACTCGGTCACATTGGTGAAGGTTTCGAGGCTGGGCCAGAAACGCACCATGGTGCCGGTTTTTTCAGTCTCGCCGGTAACCGCCAGCGGGGCCTGCGGTACACCGTGTTCGTAGATCTGACGGTGAAt                                                                                                                     >  3:98271/1‑144 (MQ=255)
                              cAGAATTTCATATTCGAACTCGGTCACATTGGTGAAGGTTTCGAGGCTGGGCCAGAAACGCACCATGGTGCCGGTTTTTTCAGTCTCGCCGGTAACCGCCAGCGGGGCCTGCGGTACACCGTGTTCGTAGATCTGACGGTGAATTTTAc                                                                                                                >  5:378540/1‑149 (MQ=255)
                               aGAATTTCATATTCGAACTCGGTCACATTGGTGAAGGTTTCGAGGCTGGGCCAGAAACGCACCATGGTGCCGGTTTTTTCAGTCTCGCCGGTAACCGCCAGCGGGGCCTGCGGTACACCGTGTTCGTAGATCTGACGGTGAATTTTAcc                                                                                                               <  4:349934/149‑1 (MQ=255)
                                 gtgtttcggtagtaaacgccctgtcgcaaaaactggagctggttatccagcgcgagggtaaaattcaccgtcagatctacgaacacggtgtaccgccagcggggcctgcggtACACCGTGTTCGTAGATCTGACGGTGAATTTTACCCt                                                                                                             >  1:437331‑M2/113‑149 (MQ=255)
                                  aTTTCATATTCGAACTCGGTCACATTGGTGAAGGTTTCGAGGCTGGGCCAGAAACGCACCATGGTGCCGGTTTTTTCAGTCTCGCCGGTAACCGCCAGCGGGGCCTGCGGTACACCGTGTTCGTAGATCTGACGGTGAATTTTACCCTc                                                                                                            <  7:283311/149‑1 (MQ=255)
                                     tCATATTCGAACTCGGTCACATTGGTGAAGGTTTCGAGGCTGGGCCAGAAACGCACCATGGTGCCGGTTTTTTCAGTCTCGCCGGTAACCGCCAGCGGGGCCTGCGGTACACCGTGTTCGTAGATCTGACGGTGAATTTTACCCTcgc                                                                                                          <  6:417909/148‑1 (MQ=255)
                                      cATATTCGAACTCGGTCACATTGGTGAAGGTTTCGAGGCTGGGCCAGAAACGCACCATGGTGCCGGTTTTTTCAGTCTCGCCGGTAACCGCCAGCGGGGCCTGCGGTACACCGTGTTCGTAGATCTGACGGTGAATTTTACCCTCgcgc                                                                                                        >  8:57466/1‑149 (MQ=255)
                                       atatTCGAACTCGGTCACATTGGTGAAGGTTTCGAGGCTGGGCCAGAAACGCACCATGGTGCCGGTTTTTTCAGTCTCGCCGGTAACCGCCAGCGGGGCCTGCGGTACACCGTGTTCGTAGATCTGACGGTGAATTTTACCCTCGCGCt                                                                                                       <  5:429738/149‑1 (MQ=255)
                                       atatTCGAACTAGGTCACATTGGTGAAGGTTTCGAGGCTTGGCCAGAAACGCACCATGGTGCCGGTTTTTTCAGTCTCGCCGGTAACCGCCAGCGGGGCCTGCGGTACACCGTGTTCGTAGATCTGACGGTGAATTTTACCCTCGCGCt                                                                                                       <  5:398791/149‑1 (MQ=255)
                                         gtagtaaacgccctgtcgcaaaaactggagctggttatccagcgcgagggtaaaattcaccatcagatctactaacacggtgtaccgccagcggggcctgcggtACACCGTGTTCGTAGATCTGACGGTGAATTTTACCCTCGCGCTgg                                                                                                     <  2:127066‑M2/45‑1 (MQ=255)
                                         atTCGAACTCGGTCACATTGGTGAAGGTTTCGAGGCTGGGCCAGAAACGCACCATGGTGCCGGTTTTTTCAGTCTCGCCGGTAACCGCCAGCGGGGCCTGCGGTACACCGTGTTCGTAGATCTGACGGTGAATTTTACCCTCGCGCTg                                                                                                      >  2:49366/1‑148 (MQ=255)
                                          ttCGAACTCGGTCACATTGGTGAAGGTTTCGAGGCTGGGCCAGAAACGCACCATGGTGCCGGTTTTTTCAGTCTCGCCGGTAACCGCCAGCGGGGCCTGCGGTACACCGTGTTCGTAGATCTGACGGTGAATTTTACCCTCGCGCTGGa                                                                                                    >  6:255471/1‑149 (MQ=255)
                                          ttCGAACTCGGTCACATTGGTGAAGGTTTCGAGGCTGGGCCAGAAACGCACCATGGTGCCGGTTTTTTCAGTCTCGCCGGTAACCGCCAGCGGGGCCTGCGGTACACCGTGTTCGTAGATCTGACGGTGAATTTTACCCTCGCGCTGGa                                                                                                    <  2:419986/149‑1 (MQ=255)
                                             gAACTCGGTCACATTGGTGAAGGTTTCGAGGCTGGGCCAGAAACGCACCATGGTGCCGGTTTTTTCAGTCTCGCCGGTAACCGCCAGCGGGGCCTGCGGTACACCGTGTTCGTAGATCTGACGGTGAATTTTACCCTCGCGCTGGATaa                                                                                                 >  7:158035/1‑149 (MQ=255)
                                             gAACTCGGTCACATTGGTGAAGGTTTCGAGGCTGGGCCAGAAACGCACCATGGTGCCGGTTTTTTCAGTCTCGCCGGTAACCGCCAGCGGGGCCTGCGGTACACCGTGTTCGTAGATCTGACGGTGAATTTTACCCTCGCGCTGGATaa                                                                                                 >  7:406275/1‑149 (MQ=255)
                                               aCTCGGTCACATTGGTGAAGGTTTCGAGGCTGGGCCAGAAACGCACCATGGTGCCGGTTTTTTCAGTCTCGCCGGTAACCGCCAGCGGGGCCTGCGGTACACCGTGTTCGTAGATCTGACGGTGAATTTTACCCTCGCGCTGGATAAcc                                                                                               <  4:308679/149‑1 (MQ=255)
                                                 tCGGTCACATTGGTGAAGGTTTCGAGGCTGGGCCAGAAACGCACCATGGTGCCGGTTTTTTCAGTCTCGCCGGTAACCGCCAGCGGGGCCTGCGGTACACCGTGTTCGTAGATCTGACGGTGAATTTTACCCTCGCGCTGGATAACCAg                                                                                             >  2:328651/1‑149 (MQ=255)
                                                   ggTCACATTGGTGAAGGTTTCGAGGCTGGGCCAGAAACGCACCATGGTGCCGGTTTTTTCAGTCTCGCCGGTAACCGCCAGCGGGGCCTGCGGTACACCGTGTTCGTAGATCTGACGGTGAATTTTACCCTCGCGCTGGATAACCAg                                                                                             <  7:94/147‑1 (MQ=255)
                                                    gTCACATTGGTGAAGGTTTCGAGGCTGGGCCAGAAACGCACCATGGTGCCGGTTTTTTCAGTCTCGCCGGTAACCGCCAGCGGGGCCTGCGGTACACCGTGTTCGTAGATCTGACGGTGAATTTTACCCTCGCGCTGGATAACCAGCTc                                                                                          <  7:57466/149‑1 (MQ=255)
                                                     tCACATTGGTGAAGGTTTCGAGGCTGGGCCAGAAACGCACCATGGTGCCGGTTTTTTCAGTCTCGCCGGTAACCGCCAGCGGGGCCTGCGGTACACCGTGTTCGTAGATCTGACGGTGAATTTTACCCTCGCGCTGGATAACCAGCTc                                                                                          >  7:339192/1‑148 (MQ=255)
                                                         aTTGGTGAAGGTTTCGAGGCTGGGCCAGAAACGCACCATGGTGCCGGTTTTTTCAGTCTCGCCGGTAACCGCCAGCGGGGCCTGCGGTACACCGTGTTCGTAGATCTGACGGTGAATTTTa                                                                                                                 <  1:310365/121‑1 (MQ=255)
                                                         aTTGGTGAAGGTTTCGAGGCTGGGCCAGAAACGCACCATGGTGCCGGTTTTTTCAGTCTCGCCGGTAACCGCCAGCGGGGCCTGCGGTACACCGTGTTCGTAGATCTGACGGTGAATTTTa                                                                                                                 <  1:316322/121‑1 (MQ=255)
                                                         aTTGGTGAAGGTTTCGAGGCTGGGCCAGAAACGCACCATGGTGCCGGTTTTTTCAGTCTCGCCGGTAACCGCCAGCGGGGCCTGCGGTACACCGTGTTCGTAGATCTGACGGTGAATTTTa                                                                                                                 >  2:310365/1‑121 (MQ=255)
                                                         aTTGGTGAAGGTTTCGAGGCTGGGCCAGAAACGCACCATGGTGCCGGTTTTTTCAGTCTCGCCGGTAACCGCCAGCGGGGCCTGCGGTACACCGTGTTCGTAGATCTGACGGTGAATTTTa                                                                                                                 >  2:316322/1‑121 (MQ=255)
                                                         aTTGGTGAAGGTTTCGAGGCTGGGCCAGAAACGCACCATGGTGCCGGTTTTTTCAGTCTCGCCGGTAACCGCCAGCGGGGCCTGCGGTACACCGTGTTCGTAGATCTGACGGTGAATTTTACCCTCGCGCTGGATAACCAGCTCCAGtt                                                                                     >  5:149875/1‑149 (MQ=255)
                                                         aTTGGTGAAGGTTTCGAGGCTGGGCCAGAAACGCACCATGGTGCCGGTTTTTTCAGTCTCGCCGGTAACCGCCAGCGGGGCCTGCGGTACACCGTGTTCGTAGATCTGACGGTGAATTTTACCCTCGCGCTGGATAACCAGCTCCAGtt                                                                                     >  2:212197/1‑149 (MQ=255)
                                                         aTTGGTGAAGGTTTCGAGGCTGGGCCAGAAACGCACCATGGTGCCGGTTTTTTCAGTCTCGCCGGTAACCGCCAGCGGGGCCTGCGGTACACCGTGTTCGTAGATCTGACGGTGAATTTTACCATCGCGCTGGATAGCCAGCTCCAGtg                                                                                     >  4:277997/1‑148 (MQ=255)
                                                             gTGAAGGTTTCGAGGCTGGGCCAGAAACGCACCATGGTGCCGGTTTTTTCAGTCTCGCCGGTAACCGCCAGCGGGGCCTGCGGTACACCGTGTTCGTAGATCTGACGGTGAATTTTACCCTCGCGCTGGATAACCAGCTCCAGttttt                                                                                  <  8:339192/148‑1 (MQ=255)
                                                             gTGAAGGTTTCGAGGCTGGGCCAGAAACGCACCATGGTGCCGGTTTTTTCAGTCTCGCCGGTAACCGCCAGCGGGGCCTGCGGTACACCGTGTTCGTAGATCTGACGGTGAATTTTACCCTCGCGCTGGATAACCAGCTCCAGTTTTTg                                                                                 >  1:178922/1‑149 (MQ=255)
                                                             gTGAAGGTTTCGAGGCTGGGCCAGAAACGCACCATGGTGCCGGTTTTTTCAGTCTCGCCGGTAACCGCCAGCGGGGCCTGCGGTACACCGTGTTCGTAGATCTGACGGTGAATTTTACCCTCGCGCTGGATAACCAGCTCCAGTTTTTg                                                                                 >  1:308069/1‑149 (MQ=255)
                                                              tGAAGGTTTCGAGGCTGGGCCAGAAACGCACCATGGTGCCGGTTTTTTCAGTCTCGCCGGTAACCGCCAGCGGGGCCTGCGGTACACCGTGTTCGTAGATCTGACGGTGAATTTTACCCTCGCGCTGGATAACCAGCTCCAGTTTTTGc                                                                                >  8:325682/1‑149 (MQ=255)
                                                              tGAAGGTTTCGAGGCTGGGCCAGAAACGCACCATGGTGCCGGTTTTTTCAGTCTCGCCGGTAACCGCCAGCGGGGCCTGCGGTACACCGTGTTCGTAGATCTGACGGGGAATTTTACCCTCGCGCTGGATAACCAGCTCCAGTTTTTGc                                                                                <  4:164571/149‑1 (MQ=255)
                                                                 aGGTTTCGAGGCTGGGCCAGAAACGCACCATGGTGCCGGTTTTTTCAGTCTCGCCGGTAACCGCCAGCGGGGCCTGCGGTACACCGTGTTCGTAGATCTGACGGTGAATTTTACCCTCGCTCTGGATAACCAGCTCCAGTTTTTGCGa                                                                              >  4:7/1‑148 (MQ=255)
                                                                  ggTTTCGAGGCTGGGCCAGAAACGCACCATGGTGCCGGTTTTTTCAGTCTCGCCGGTAACCGCCAGCGGGGCCTGCGGTACACCGTGTTCGTAGATCTGACGGTGAATTTTACCCTCGCGCTGGATAACCAGCTCCAGTTTTTGCGa                                                                              >  6:253149/1‑147 (MQ=255)
                                                                        gAGGCTGGGCCAGAAACGCACCATGGTGCCGGTTTTTTCAGTCTCGCCGGTAACCGCCAGCGGGGCCTGCGGTACACCGTGTTCGTAGATCTGACGGTGAATTTTACCCTCGCGCTGGATAACCAGCTCCAGTTTTTGCGACAGGGCGt                                                                      <  8:158035/149‑1 (MQ=255)
                                                                        gAGGCTGGGCCAGAAACGCACCATGGTGCCGGTTTTTTCAGTCTCGCCGGTAACCGCCAGCGGGGCCTGCGGTACACCGTGTTCGTAGATCTGACGGTGAATTTTA‑CCTCGCGCTGGGATACCCGCGGCAGGTTTTGCGCAAggggggt                                                                     >  1:223194/1‑145 (MQ=255)
                                                                         aGGCTGGGCCAGAAACGCACCATGGTGCCGGTTTTTTCAGTCTCGCCGGTAACCGCCAGCGGGGCCTGCGGTACACCGTGTTCGTAGATCTGACGGTGAATTTTACCCTCGCGCTGGATAACCAGCTCCAGTTTTTGCGACAGGGCGtt                                                                     <  6:378540/149‑1 (MQ=255)
                                                                          ggCTGGGCCAGAAACGCACCATGGTGCCGGTTTTTTCAGTCTCGCCGGTAACCGCCAGCGGGGCCTGCGGTACACCGTGTTCGTAGATCTTACGGTGAATTTTACCCTCGCGCTGGATAACCAGCTCCAGTTTTTGCGACATGGCGtt                                                                     <  1:82376/148‑1 (MQ=255)
                                                                          ggCTGGGCCAGAAACGCACCATGGTGCCGGTTTTTTCAGTCTCGCCGGTAACCGCCAGCGGGGCCTGCGGTACACCGTGTTCGTAGATCTGACGGTGAATTTTACCCTCGCGCTGGATAACCAGCTCCAGTTTTTGCGACAGGGCGttt                                                                    <  1:127555/149‑1 (MQ=255)
                                                                            cTGGGCCAGAAACGCACCATGGTGCCGGTTTTTTCAGTCTCGCCGGTAACCGCCAGCGGGGCCTGCGGTACACCGTGTTCGTAGATCTGACGGTGAATTTTACCCTCGCGCTGGATAACCAGCTCCAGTTTTTGCGACAGGGCGTTtac                                                                  <  1:327640/149‑1 (MQ=255)
                                                                                 agcgcgagggtaaaattcaccgtcagatctacgaacacggtgtACCGCAGGCCCCGCTGGCGGTACACCGTGTTCGTAGATCTGACGGTGAATTTTACCCTCGCGCTGGATAACCAGCTCCAGTTTTTGCGACAGGGCGTTTACTAcc                                                              <  2:437331‑M1/105‑1 (MQ=255)
                                                                                  cAGAAACGCACCATGGTGCCGGTTTTTTCAGTCTCGCCGGTAACCGCCAGCGGGGCCTGCGGTACACCGTGTTCGTAGATCTGACGGTGAATTTTACCCTCGCGCTGGATAACCAGCTCCAGTTTTTGCGACAGGGCGTTTACTACCg                                                             >  1:54888/1‑148 (MQ=255)
                                                                                   aGAAACGCACCATGGTGCCGGTTTTTTCAGTCTCGCCGGTAACCGCCAGCGGGGCCTGCGGTACACCGTGTTCGTAGATCTGACGGTGAATTTTACCCTCGCGCTGGATAACCAGCTCCAGTTTTTGCGACAGGGCGTTTACTACCGa                                                            >  5:114781/1‑148 (MQ=255)
                                                                                     aaaCGCACCATGGTGCCGGTTTTTTCAGTCTCGCCGGTAACCGCCAGCGGGGCCTGCGGTACACCGTGTTCGTAGATCTGACGGTGAATTTTACCCTCGCGCTGGATAACCAGCTCCAGTTTTTGCGACAGGGCGTTTACTACCGAAac                                                         <  6:114781/149‑1 (MQ=255)
                                                                                           aCCATGGTGCCGGTTTTTTCAGTCTCGCCGGTAACCGCCAGCGGGGCCTGCGGTACACCGTGTTCGTAGATCTGACGGTGAATTTTACCCTCGCGCTGGATAACCAGCTCCAGTTTTTGCGACAGGGCGTTTACTACCGAAACACCAAc                                                   <  3:277997/149‑1 (MQ=255)
                                                                                           aCCATGGTGCCGGTTTTTTCAGTCTCGCCGGTAACCGCCAGCGGGGCCTGCGGTACACCGTGTTCGTAGATCTGACGGTGAATTTTACCCTCGCGCTGGATAACCAGCTCCAGTTTTTGCGACAGGGCGTTTACTACCGAAACACCAAc                                                   >  7:235343/1‑149 (MQ=255)
                                                                                             cATGGTGCCGGTTTTTTCAGTCTCGCCGGTAACCGCCAGCGGGGCCTGCGGTACACCGTGTTCGTAGATCTGACGGTGAATTTTACCCTCGCGCTGGATAACCAGCTCCAGTTTTTGCGACAGGGCGTTTACTACCGAAACACCAACGc                                                 >  2:100963/1‑149 (MQ=255)
                                                                                                   gCCGGTTTTTTCAGTCTCGCCGGTAACCGCCAGCGGGGCCTGCGGTACACCGTGTTCGTAGATCTGACGGTGAATTTTACCCTCGCGCTGGATAACCAGCTCCAGTTTTTGCGACAGGGCGTTTACTACCGAAACACCAACGCCGTg                                             >  8:54123/1‑147 (MQ=255)
                                                                                                     cGGTTTTTTCAGTCTCGCCGGTAACCGCGAGCCGGGCCTGCGGTACACCGTGTTCGTAGATCTCACGGTGAATTTAACCCTCGCGCTGGATAACCAGCTCCAGTTTTTGCGACAGGGCGTTTACTACCGAAACACCAACGCCGTGCAGa                                         >  4:47762/1‑149 (MQ=255)
                                                                                                          ttttCAGTCTCGCCGGTAACCGCCAGCGGGGCCTGCGGTACACCGTGTTCGTAGATCTGACGGTGAATTTTACCCTCGCGCTGGATAACCAGCTCCAGTTTTTGCGACAGGGCGTTTACTACCGAAACACCAACGCCGTGCAGAccgcc                                    >  8:188497/1‑149 (MQ=255)
                                                                                                            ttCAGTCTCGCCGGTAACCGCCAGCGGGGCCTGCGGTACTCCGTGTTCGTTGATCTGACGGTGAATTTTTCCCTCGCGCTGGATAAGCAGGTCCAGTTTTTGCGAGAGTGCGTTTACTACCGATTCACCAACGCCGTGCAGAacgcct                                   >  3:150390/1‑147 (MQ=255)
                                                                                                              cAGTCTCGCCGGTAACCGCCAGCGGGGCCTGCGGTAGACCGTGTTCGTAGATCTGACGGTGAATTTTACCCTCGCGCTGGATAACCAGCTCCAGTTTTTGCGACAGGGCGTTTACTACCGAAACACCAACGCCGTGCAGACCGCCGGa                                 <  4:348735/148‑1 (MQ=255)
                                                                                                              cAGTCTCGCCGGTAACCGCCAGCGGGGCCTGCGGTACACCGTGTTCGTAGATCTGACGGTGAATTTTACCCTCGCGCTGGATAACCAGCTCCAGTTTTTGCGACAGGGCGTTTACTACCGAAACACCAACGCCGTGCAGACCGCCGGa                                 >  2:276044/1‑148 (MQ=255)
                                                                                                               aGTCTCGCCGGTAACCGCCAGCGGGGCCTGCGGTACACCGTGTTCGTAGATCTGACGGTGAATTTTACCCTCGCGCTGGATAACCAGCTCCAGTTTTTGCGACAGGGCGTTTACTACCGAAACACCAACGCCGTGCAGACCGCCGGaca                               <  1:328651/149‑1 (MQ=255)
                                                                                                                 tctcGCCGGTAACCGCCAGCGGGGCCTGCGGTACACCGTGTTCGTAGATCTGACGGTGAATTTTACCCTCGCGCTGGATAACCAGCTCCAGTTTTTGCGACAGGGCGTTTACTACCGAAACACCAACGCCGTGCAGACCGCCGGACACt                             >  7:60498/1‑149 (MQ=255)
                                                                                                                     gCCGGTAACCGCCAGCGGGGCCTGCGGTACACCGTGTTCGTAGATCTGACGGTGAATTTTACCCTCGCGCTGGATAACCAGCTCCAGTTTTTGCGACAGGGCGTTTACTACCGAAACACCAACGCCGTGCAGACCGCTGGACACtt                            <  8:29665/146‑1 (MQ=255)
                                                                                                                     gCCGGTAACCGCCAGCGGGGCCTGCGGTACACCGTGTTCGTAGATCTGACGGTGAATTTTACCCTCGCGCTGGATAACCAGCTCCAGTTTTTGCGACAGGGCGTTTACTACCGAAACACCAACGCCGTGCAGACCGCCGGACACTTta                          >  3:281879/1‑148 (MQ=255)
                                                                                                                      ccGGTAACCGCCAGCGGGGCCTGCGGTACACCGTGTTCGTAGATCTGACGGTGAATTTTACCCTCGCGCTGGATAACCAGCTCCAGTTTTTGCGACAGGGCGTTTACTACCGAAACACCAACGCCGTGCAGACCGCCGGACACTTtata                        <  2:54888/149‑1 (MQ=255)
                                                                                                                       cGGTAACCGCCAGCGGGGCCTGCGGTACACCGTGTTCTTAGATCTGACGGTGAATTTTACCCTCGCGCTGGATAACCAGCTCCAGTTTTTGCGACAGGGCGTTTACTACCGAAACACCAACGCCGTGCAGACCGCCGGACACTTTATAg                       <  6:76260/149‑1 (MQ=255)
                                                                                                                       cGGTAACCGCCAGCGGGGCCTGCGGTACACCGTGTTCGTAGATCTGACGGTGAATTTTACCCTCGCGCTGGATAACCAGCTCCAGTTTTTGCGACAGGGCGTTTACTACCGAAACACCAACGCCGTGCAGACCGCCGGACACTTTATAg                       <  2:317714/149‑1 (MQ=255)
                                                                                                                         gTAACCGCCAGCGGGGCCTGCGGTACACCGTGTTCGTAGATCTGACGGTGAATTTTACCCTCGCGCTGGATAACCAGCTCCAGTTTTTGCGACAGGGCGTTTACTACCGAAACACCAACGCCGTGCAGACCGCCGGACACTTTATAg                       >  1:413408/1‑147 (MQ=255)
                                                                                                                         gTAACCGCCAGCGGGGCCTGCGGTACACCGTGTTCGTAGATCTGACGGTGAATTTTACCCTCGCGCTGGATAACCAGCTCCAGTTTTTGCGACAGGGCGTTTACTACCGAAACACCAACGCCGTGCAGACCGCCGGACACTTTATAGGa                     <  7:438001/149‑1 (MQ=255)
                                                                                                                          tAACCGCCAGCGGGGCCTGCGGTACACCGTGTTCGTAGATCTGCCGGGGAATTTAACCCTCGCGCTGGATACCCAGCTCCAGTTTTTGCGACAGGGCGTTTACTACCGAAACACCAACGCCGTGCAGACCGCCGGACACTTTATAGGAg                    <  3:215174/149‑1 (MQ=255)
                                                                                                                            ACCGCCAGCGGGGCCTGCGGTACACCGTGTTCGTAGATCTGACGGTGAATTTTACCCTCGCGCTGGATAACCAGCTCCAGTTTTTGCGACAGGGCGTTTACTACCGAAACACCAACGCCGTGCAGACCGCCGGACACTTTATAGGAGtt                  >  7:325682‑M1/1‑149 (MQ=255)
                                                                                                                              CGCCAGCGGGGCCTGCGGTACACCGTGTTCGTAGATGTGACGGTGAATTTTACCCTCGCGCTGGATAACCAGCTCCAGTTTTTGCGACAGGGCGTTTACTACCGAAACACCAACGCCGTGCAGAccgcc                                    >  5:401‑M1/1‑129 (MQ=255)
                                                                                                                              CGCCAGCGGGGCCTGCGGTACACCGTGTTCGTAGATCTGACGGTGAATTTTACCCTCGCGCTGGATAACCAGCTCCAGTTTTTGCGACAGGGCGTTTACTACCGAAACACCAACGCCGTGCAGAccgcc                                    <  6:401‑M1/129‑1 (MQ=255)
                                                                                                                              CGCCAGCGGGGCCTGCGGTACACCGTGTTCGTAGATCTGACGGTGAATTTTACCCTCGCGCTGGATAACCAGCTCCAGTTTTTGCGACAGGGCGTTTACTACCGAAACACCAACGCCGTGCAGACCGCCGGACACTTTATAGGAGTTAt                <  2:288896‑M1/149‑1 (MQ=255)
                                                                                                                                CCAGCGGGGCCTGCGGTACACCGTGTTCGTAGATCTGACGGTGAATTTTACCCTCGCGCTGGATAACCAGCTCCAGTTTTTGCGACAg                                                                           >  7:20572‑M1/1‑88 (MQ=255)
                                                                                                                                CCAGCGGGGCCTGCGGTACACCGTGTTCGTAGATCTGACGGTGAATTTTACCCTCGCGCTGGATAACCAGCTCCAGTTTTTGCGACAg                                                                           <  8:20572‑M1/88‑1 (MQ=255)
                                                                                                                                  aGCGGGGCCTGCGGTACACCGTGTTCGTAGATCTGACGGTGAATTTTACCCTCGCGCTGGATAACCAGCTCCAGTTTTTGCGACAGGGCGTTTACTACCGAAACACCAACGCCGTGCAGACCGCCGGACACTTTATAGGAGTTATCGTc            <  4:304673/149‑1 (MQ=255)
                                                                                                                                  aGCGGGGCCTGCGGTACACCGTGTTCGTAGATCTGACGGTGAATTTTACCCTCGCGCTGGATAACCAGCTCCAGTTTTTGCGACAGGGCGTTTACTACCGAAACACCAACGCCGTGCAGACCGCCGGACACTTTATAGGAGTTATCGTc            <  5:255471/149‑1 (MQ=255)
                                                                                                                                          cTGCGGTACACCGTGTTCGTAGATCTGACGGTGAATTTTACCCTCGCGCTGGATAACCAGCTCCAGTTTTTGCGACAGGGCGTTTACTACCGAAACACCAACGCCGTGCAGACCGCCGGACACTTTATAGGAGTTATCGTCAAATTTAc    <  5:194805/149‑1 (MQ=255)
                                                                                                                                           tGCGGTACACCGTGTTCGTAGATCTGACGGTGAATTTTACCCTCGCGCTGGATAACCAGCTCCAGTTTTTGCGACAGGGCGTTTACTACCGAAACACCAACGCCGTGCAGACCGCCGGACACTTTATAGGAGTTATCGTCAAATTTAcc   >  7:52342/1‑149 (MQ=255)
                                                                                                                                            gcggtACACCGTGTTCGTAGATCTGACGGTGAATTTTACCCTCGCGCTGGATAACCAGCTCCAGTTTTTGCGACAGGGCGTTTACTACCGAAACACCAACGCCGTGCAGACCGCCGGACACTTTATAGGAGTTATCGTCAAATTTAcc   <  2:76154‑M2/143‑1 (MQ=255)
                                                                                                                                                tACACCGTGTTCGTAGATCTGACGGTGAATTTTACCCTCGCGCTGGATAACCAGCTCCAGTTTTTGCGACAGGGCGTTTACTACCGAAACACCAACGCCGTGCAGACCGCCGGACACTTTATAGGAGTTAt                >  4:83502‑M2/2‑131 (MQ=255)
                                                                                                                                                 |                                                                                                                                               
GAGGAACGACAACTCACGCAGACGTTTCGCCAGAATTTCATATTCGAACTCGGTCACATTGGTGAAGGTTTCGAGGCTGGGCCAGAAACGCACCATGGTGCCGGTTTTTTCAGTCTCGCCGGTAACCGCCAGCGGGGCCTGCGGTACACCGTGTTCGTAGATCTGACGGTGAATTTTACCCTCGCGCTGGATAACCAGCTCCAGTTTTTGCGACAGGGCGTTTACTACCGAAACACCAACGCCGTGCAGACCGCCGGACACTTTATAGGAGTTATCGTCAAATTTACCG  >  NC_000913/3879529‑3879817

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.