New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 4412115	60 (1.740)	5 (0.150)	5/244	3.0	8.3%	coding (137/399 nt)	yjfL	UPF0719 family inner membrane protein
	?	NC_000913	= 4412132	54 (1.640)					coding (154/399 nt)	yjfL	UPF0719 family inner membrane protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TTTACAATGCATATACTGGATTCACTTCTTGCCTTTAGCGCCTATTTTTTTATTGGCGTGGCTATGGTGATTATTTTTCTGTTTATCTATTCTAAAATTACACCGCACAACGAATGGCAGTTAATCAAAAACAATAATACCGCGGCGTCACTGGCGTTCAGCGGTACATTGTTGGGTTACGTTATCCCCTTATCCAGTGCGGCAATCAATGCGGTGAGTATTCCAGACTATTTCGCCTGGGGCGGGATTGCACTGGTGATTCAGTTACTCGTTTTTGCTGGTGTCAGA  >  NC_000913/4411973‑4412260                                                                                                                                               |                                                                                                                                                  tttACAATGCATATACTGGATTCACTTCTTGCCTTTAGCGCCTATTTTTTTATTGGCGTGGCTATGGTGATTATTTTTCTGTTTATCTATTCTAAAATTACACCGCACAACGAATGGCAGTTAATCAAAAACAATAATACCGCGGCGt                                                                                                                                              >  1:23078/1‑148 (MQ=255)  ttACAATGCATATACTGGATTCACTTCTTGCCTTTAGCGCCTATTTTTTTATTGGCGTGGCTATGGTGATTATTTTTCTGTTTATCTATTCTAAAATTACACCGCACAACGAATGGCAGTTAATCAAAAACAATAATACCGCGGCGTCa                                                                                                                                            >  3:98935/1‑149 (MQ=255)      aaTGCATATACTGGATTCACTTCTTGCCTTTAGCGCCTATTTTTTTATTGGCGTGGCTATGGTGATTATTTTTCTGTTTATCTATTCTAAAATTACACCGCACAACGAATGGCAGTTAATCAAAAACAATAATACCGCGGCGTCACTgg                                                                                                                                        <  4:23874/149‑1 (MQ=255)        tGCATATACTGGATTCACTTCTTGCCTTTAGCGCCTATTTTTTTATTGGCGTGGCTATGGTGATTATTTTTCTGTTTATCTATTCTAAAATTACACCGCACAACGAATGGCAGTTAATCAAAAACAATAATACCGCGGCGTCACTGGCg                                                                                                                                      <  5:104774/149‑1 (MQ=255)            tataCTGGATTCACTTCTTGCCTTTAGCGCCTATTTTTTTATTGGCGTGGCTATGGTGATTATTTTTCTGTTTATCTATTCTAAAATTACACCGCACAACGAATGGCAGTTAATCAAAAACAATAATACCGCGGCGTCACTGGCGTTCa                                                                                                                                  <  2:194496/149‑1 (MQ=255)            tataCTGGATTCACTTCTTGCCTTTAGCGCCTATTTTTTTATTGGCGTGGCTATGGTGATTATTTTTCTGTTTATCTATTCTAAAATTACACCGCACAACGAATGGCAGTTAATCAAAAACAATAATACCGCGGCGTCACTGGCGTTCa                                                                                                                                  <  7:40570/149‑1 (MQ=255)              taCTGGATTCACTTCTTGCCTTTAGCGCCTATTTTTTTATTGGCGTGGCTATGGTGATTATTTTTCTGTTTATCTATTCTAAAATTACACCGCACAACGAATGGCAGTTAATCAAAAACAATAATACCGCGGCGTCACTGGCGTTCAg                                                                                                                                 <  4:98935/148‑1 (MQ=255)               aCTGGATTCACTTCTTGCCTTTAGCGCCTATTTTTTTATTGGCGTGGCTATGGTGATTATTTTTCTGTTTATCTATTCTAAAATTACACCGCACAACGAATGGCAGTTAATCAAAAACAATAATACCGCGGCGTCACTGGCGTTCAGCg                                                                                                                               >  6:107887/1‑149 (MQ=255)                        aCTTCTTGCCTTTAGCGCCTATTTTTTTATTGGCGTGGCTATGGTGATTATTTTTCTGTTTATCTATTCTAAAATTACACCGCACAACGAATGGCAGTTAATCAAAAACAATAATACCGCGGCGTCACTGGCGTTCAGCGGTACAttgt                                                                                                                      >  6:57817/1‑149 (MQ=255)                        aCTTCTTGCCTTTAGCGCCTATTTTTTTATTGGCGTGGCTATGGTGATTATTTTTCTGTTTATCTATTCTAAAATTACACCGCACAACGAATGGCAGTTAATCAAAAACAATAATACCGCGGCGTCACTGGCGTTCAGCGGTACAttgt                                                                                                                      >  8:70640/1‑149 (MQ=255)                         cttcttGCCTTTAGCGCCTATTTTTTTATTGGCGTGGCTATGGTGATTATTTTTCTGTTTATCTATTCTAAAATTACACCGCACAACGAATGGCAGTTAATCAAAAACAATAATACCGCGGCGTCACTGGCGTTCAGCGGTACAttgtt                                                                                                                     <  7:70640/149‑1 (MQ=255)                         cttcttGCCTTTAGCGCCTATTTTTTTATTGGCGTGGCTATGGTGATTATTTTTCTGTTTATCTATTCTAAAATTACACCGCACAACGAATGGCAGTTAATCAAAAACAATAATACCGCGGCGTCACTGGCGTTCAGCGGTACAttgtt                                                                                                                     <  6:102062/149‑1 (MQ=255)                            cttGCCTTTAGCGCCTATTTTTTTATTGGCGTGGCTATGGTGATTATTTTTCTGTTTATCTATTCTAAAATTACACCGCACAACGAATGGCAGTTAATCAAAAACAATAATACCGCGGCGTCACTGGCGTTCAGCGGTACATTGTTgg                                                                                                                   <  2:23078/148‑1 (MQ=255)                            cttGCCTTTAGCGCCTATTTTTTTATTGGCGTGGCTATGGTGATTATTTTTCTGTTTATCTATTCTAAAATTACACCGCACAACGAATGGCAGTTAATCAAAAACAATAATACCGCGGCGTCACTGGCGTTCAGCGGTACATTGTTgg                                                                                                                   <  8:272/148‑1 (MQ=255)                               gCCTTTAGCGCCTATTTTTTTATTGGCGTGGCTATGGTGATTATATTTCTGTTTATCTATTCTAAAATTACACCGCACAACGAATGGCAGTTAATCAAAAACAATAATACCGCGGCGTCACTGGCGTTCAGCGGTACATTGTTGGGTTa                                                                                                               >  4:127037/1‑149 (MQ=255)                                             tttttttATTGGCGTGGCTATGGTGATTATTTTTCTGTTTATCTATTCTAAAATTACACCGCACAACGAATGGCAGTTAATCAAAAACAATAATACCGCGGCGTCACTGGCGTTCAGCGGTACATTGTTGGGTTACGTTATCCCCTTa                                                                                                  <  5:107887/148‑1 (MQ=255)                                              ttttttATTGGCGTGGCTATGGTGATTATTTTTCTGTTTATCTATTCTAAAATTACACCGCACAACGAATGGCAGTTAATCAAAAACAATAATACCGCGGCGTCACTGGCGTTCAGCGGTACATTGTTGGGTTACGTTATCCCCTTATc                                                                                                >  8:8788/1‑149 (MQ=255)                                               tttttATTGGCGTGGCTATGGTGATTATTTTTCTGTTTATCTATTCTAAAATTACACCGCACAACGAATGGCAGTTAATCAAAAACAATAATACCGCGGCGTCACTGGCGTTCAGCGGTACATTGTTGGGTTACGTTATCCCCTTATc                                                                                                <  7:8788/148‑1 (MQ=255)                                                        gCGTGGCTATGGTGATTATTTTTCTGTTTATCTATTCTAAAATTACACCGCACAACGAATGGCAGTTAATCAAAAACAATAATACCGCGGCGTCACTGGCGTTCAGCGGTACATTGTTGGGTTACGTTATCCCCTTATCCAGTGCGGc                                                                                       >  5:5584/1‑148 (MQ=255)                                                                   gTGATTATTTTTCTGTTTATCTATTCTAAAATTACACCGCACAACGAATGGCAGTTAATCAAAAACAATAATACCGCGGCGTCACTGGCGTTCAGCGGTACATTGTTGGGTTACGTTATCCCCTTATc                                                                                                <  6:64049/128‑1 (MQ=255)                                                                   gTGATTATTTTTCTGTTTATCTATTCTAAAATTACACCGCACAACGAATGGCAGTTAATCAAAAACAATAATACCGCGGCGTCACTGGCGTTCAGCGGTACATTGTTGGGTTACGTTATCCCCTTATc                                                                                                >  5:64049/1‑128 (MQ=255)                                                                    tGATTATTTTTCTGTTTATCTATTCTAAAATTACACCGCACAACGAATGGCAGTTAATCAAAAACAATAATACCGCGGCGTCACTGGCGTTCAGCGGTACATTGTTGGGTTACGTTATCCCCTTATCCAGTGCGGCAATCAATGCGGt                                                                           >  1:161032/1‑148 (MQ=255)                                                                      attattTTTCTGTTTATCTATTCTAAAATTACACCTCACAACGAATGGCAGTTAATCAAAAACAATAATACCGCGGCGTCACTGGCGTTCAGCGGTACATTGTTGGGTTACGTTATCCCCTTATCCAGTGCGGCAATCAATGc                                                                              <  7:92566/143‑1 (MQ=255)                                                                      attattTTTCTGTTTATCTATTCTAAAATTACACCGCACAACGAATGGCAGTTAATCAAAAACAATAATACCGCGGCGTCACTGGCGTTCAGCGGTACATTGTTGGGTTACGTTATCCCCTTATCCAGTGCGGCAATCAATGc                                                                              >  8:92566/1‑143 (MQ=255)                                                                       ttattTTTCTGTTTATCTATTCTAAAATTACACCGCACAACGAATGGCAGTTAATCAAAAACAATAATACCGCGGCGTCACTGGCGTTCAGCGGTACATTGTTGGGTTACGTTATCCCCTTATCCAGTGCGGCAATCAATGCGGTGAg                                                                        >  4:81662/1‑148 (MQ=255)                                                                              tCTGTTTATCTATTCTAAAATTACACCGCACAACGAATGGCAGTTAATCAAAAACAATAATACCGCGGCGTCACTGGCGTTCAGCGGTACATTGTTGGGTTACGTTATCCCCTTATCCAGTGc                                                                                          <  1:166257/123‑1 (MQ=255)                                                                              tCTGTTTATCTATTCTAAAATTACACCGCACAACGAATGGCAGTTAATCAAAAACAATAATACCGCGGCGTCACTGGCGTTCAGCGGTACATTGTTGGGTTACGTTATCCCCTTATCCAGTGc                                                                                          >  2:166257/1‑123 (MQ=255)                                                                              tCTGTTTATCTATTCTAAAATTACACCGCACAACGAATGGCAGTTAATCAAAAACAATAATACCGCGGCGTCACTGGCGTTCAGCGGTACATTGTTGGGTTACGTTATCCCCTTATCCAGTGCGGCAATCAATGCGGTGAGTATTCCa                                                                 <  5:57817/148‑1 (MQ=255)                                                                                     aTCTATTCTAAAATTACACCGCACAACGAATGGCAGTTAATCAAAAACAATAATACCGCGGCGTCACTGGCGTTCAGCGGTACATTGTTGGGTTACGTTATCCCCTTATcc                                                                                               >  3:59401/1‑111 (MQ=255)                                                                                     aTCTATTCTAAAATTACACCGCACAACGAATGGCAGTTAATCAAAAACAATAATACCGCGGCGTCACTGGCGTTCAGCGGTACATTGTTGGGTTACGTTATCCCCTTATcc                                                                                               <  4:59401/111‑1 (MQ=255)                                                                                     aTCTATTCTAAAATTACACCGCACAACGAATGGCAGTTAATCAAAAACAATAATACCGCGGCGTCACTGGCGTTCAGCGGTACATTGTTGGGTTACGTTATCCCCTTATCCAGTGCGGCAATCAATGCGGTGAGTATTCCAGACTAttt                                                         >  2:164437/1‑149 (MQ=255)                                                                                       cTATTCTAAAATTACACCGCACAACGAATGGCAGTTAATCAAAAACAATAATACCGCGGCGTCACTGGCGTTCAGCGGTACATTGTTGGGTTACGTTATCCCCTTATCCAGTGCGGcaat                                                                                    >  3:83352/1‑120 (MQ=255)                                                                                       cTATTCTAAAATTACACCGCACAACGAATGGCAGTTAATCAAAAACAATAATACCGCGGCGTCACTGGCGTTCAGCGGTACATTGTTGGGTTACGTTATCCCCTTATCCAGTGCGGcaat                                                                                    <  4:83352/120‑1 (MQ=255)                                                                                          ttCTAAAATTACACCGCACAACGAATGGCAGTTAATCAAAAACAATAATACCGCGGCGTCACTGGCGTTCAGCGGTACATTGTTGGGTTACGTTATCCCCTTATCCAGTGCGGCAATCAATGCGGTGAGTATTCCAGACTATTTCGCCt                                                    <  3:127037/149‑1 (MQ=255)                                                                                             tAAAATTACACCGCACAACGAATGGCAGTTAATCAAAAACAATAATACCGCGGCGTCACTGGCGTTCGGCGGTACATTGTTGGGTTACGTTATCCCCTTATCCAGTGCGGCAATCAATGCGGTGAGTATTCCAGACTATTTCGCCTggg                                                 >  6:111133/1‑149 (MQ=255)                                                                                             tAAAATTACACCGCACAACGAATGGCAGTTAATCAAAAACAATAATACCGCGGCGTCACTGGCGTTCAGCGGTACATTGTTGGGTTACGTTATCCCCTTATCCAGTGCGGCAATCAATGCGGTGAGTATTCCAGACTATTTCGCCTggg                                                 >  7:7199/1‑149 (MQ=255)                                                                                                  ttACACCGCACAACGAATGGCAGTTAATCAAAAACAATAATACCGCGGCGTCACTGGCGTTCAGCGGTACATTGTTGGGTTACGt                                                                                                            >  1:170723/1‑85 (MQ=255)                                                                                                  ttACACCGCACAACGAATGGCAGTTAATCAAAAACAATAATACCGCGGCGTCACTGGCGTTCAGCGGTACATTGTTGGGTTACGt                                                                                                            <  2:170723/85‑1 (MQ=255)                                                                                                     cacCGCACAACGAATGGCAGTTAATCAAAAACAATAATACCGCGGCGTCACTGGCGTTCAGCGGTACATTGTTgg                                                                                                                   <  5:154778/75‑1 (MQ=255)                                                                                                     cacCGCACAACGAATGGCAGTTAATCAAAAACAATAATACCGCGGCGTCACTGGCGTTCAGCGGTACATTGTTgg                                                                                                                   >  6:154778/1‑75 (MQ=255)                                                                                                     cacCGCACAACGAATGGCAGTTAATCAAAAACAATAATACCGCGGCGTCACTGGCGTTCAGCGGTACATTGTTGGGTTACGTTATCCCCTTATCCAGTGCGGCAATCAATGCGGTGAGTATTCCAGACTATTTCGCCTGGGGCGGGAtt                                         <  8:7199/149‑1 (MQ=255)                                                                                                      acCGCACAACGAATGGCAGTTAATCAAAAACAATAATACCGCGGCGTCACTGGCGTTCAGCGGTACATTGTTGGGTTACGTTATCCCCTTATc                                                                                                <  1:101757/93‑1 (MQ=255)                                                                                                      acCGCACAACGAATGGCAGTTAATCAAAAACAATAATACCGCGGCGTCACTGGCGTTCAGCGGTACATTGTTGGGTTACGTTATCCCCTTATc                                                                                                >  2:101757/1‑93 (MQ=255)                                                                                                        cGCACAACGAATGGCAGTTAATCAAAAACAATAATACCGCGGCGTCACTGGCGTTCAGCGGTACATTGTTGGGTTACGTTATCCCCTTATCCAGTGCGGCAATCAATGCGGTGAGTATTCCAGACTATTTCGCCTGGGGCGGGATTGCa                                      >  2:4920/1‑149 (MQ=255)                                                                                                           acaACGAATGGCAGTTAATCAAAAACAATAATACCGCGGCGTCACTGGCGTTCAGCGGTACATTGTTGGGTTACGTTATCCCCTTATCCAGTGCGGCAATCAATGCGGTGAGTATTCCAGACTATTTCGCCTGGGGCGGGATTGCACTg                                   <  6:5584/149‑1 (MQ=255)                                                                                                           acaACGAATGGCAGTTAATCAAAAACAATAATACCGCGGCGTCACTGGCGTTCAGCGGTACATTGTTGGGTTACGTTATCCCCTTATCCAGTGCGGCAATCAATGCGGTGAGTATTCCAGACTATTTCGCCTGGGGCGGGATTGCACTg                                   <  1:164437/149‑1 (MQ=255)                                                                                                             aaCGAATGGCAGTTAATCAAAAACAATAATACCGCGGCGTCACTGGCGTTCAGCGGTACATTGTTGGGTTACGTTATCCCCTTATCCAGTGCGGCAATCAATGCGGTGAGTATTCCAGACTATTTCGCCTGGGGCGGGATTGCACTGGt                                 >  2:129913/1‑149 (MQ=255)                                                                                                             aaCGAATGGCAGTTAATCAAAAACAATAATACCGCGGCGTCACTGGCGTTCAGCGGTACATTGTTGGGTTACGTTATCCCCTTATCCAGTGCGGCAATCAATGCGGTGAGTATTCCAGACTATTTCGCCTGGGGCGGGATTGCACTGGt                                 >  5:124701/1‑149 (MQ=255)                                                                                                               cGAATGGCAGTTAATCAAAAACAATAATACCGCGGCGTCACTGGCGTTCAGCGGTACATTGTTGGGTTAc                                                                                                              <  7:77368/70‑1 (MQ=255)                                                                                                               cGAATGGCAGTTAATCAAAAACAATAATACCGCGGCGTCACTGGCGTTCAGCGGTACATTGTTGGGTTAc                                                                                                              >  8:77368/1‑70 (MQ=255)                                                                                                                 aaTGGCAGTTAATCAAAAACAATAATACCGCGGCGTCACTGGCGTTCAGCGGTACATTGTTGGGTTACGTTATCCCCTTATCCAGTGCGGCAATCAATGCGGTGAGTATTCCAGACTATTTCGCCTGGGGCGGGATTGCACTGGTGAtt                             <  1:129913/149‑1 (MQ=255)                                                                                                                    ggCAGTTAATCAAAAACAATAATACCGCGGCGTCACTGGCGTTCAGCGGTACATTGTTGGGTTACGTTATCCCCTTATCCAGTGCGGCAATCAATGCGGTGAGTATTCCAGACTATTTCGCCTGGGGCGGGATTGCACTGGTGATTCAg                          >  2:56528/1‑149 (MQ=255)                                                                                                                     gCAGTTAATCAAAAACAATAATACCGCGGCGTCACTGGCGTTCAGCGGTACATTGTTGGGTTACGTTATCCCCTTATCCAGTGCGGCAATCAATGCGGTGAGTATTCCAGACTATTTCGCCTGGGGCGGGATTGCACTGGTGATTCAGt                         <  3:81662/149‑1 (MQ=255)                                                                                                                       aGTTAATCAAAAACAATAATACCGCGGCGTCACTGGCGTTCAGCGGTACATTGTTGGGTTACGTTATCCCCTTATCCAGTGCGGCAATCAATGCGGTGAGTATTCCAGACTATTTCGCCTGGGGCGGGATTGCACTGGTGATTCAGTTa                       >  1:25700/1‑149 (MQ=255)                                                                                                                       aGTTAATCAAAAACAATAATACCGCGGCGTCACTGGCGTTCAGCGGTACATTGTTGGGTTACGTTATCCCCTTATCCAGTGCGGCAATCAATGCGGTGAGTATTCCAGACTATTTCGCCTGGGGCGGGATTGCACTGGTGATTCAGTTa                       >  8:127194/1‑149 (MQ=255)                                                                                                                                 aaaCAATAATACCGCGGCGTCACTGGCGTTCAGCGGTACATTGTTGGGTTACGTTATCCCCTTATCCAGTGCGGCAATCAATGCGGTGAGTATTCCAGACTATTTCGCCTGGGGCGGGATTGCACTGGTGAt                              >  2:129241/1‑132 (MQ=255)                                                                                                                                 aaaCAATAATACCGCGGCGTCACTGGCGTTCAGCGGTACATTGTTGGGTTACGTTATCCCCTTATCCAGTGCGGCAATCAATGCGGTGAGTATTCCAGACTATTTCGCCTGGGGCGGGATTGCACTGGTGAt                              <  1:129241/132‑1 (MQ=255)                                                                                                                                   aCAATAATACCGCGGCGTCACTGGCGTTCAGCGGTACATTGTTGGGTTACGTTATCCCCTTATCCAGTGCGGCAATCAATGCGGTGAGTATTCCAGACTATTTCGCCTGGGGCGGGATTGCACTGGTGATTCAGTTACTCGTTTTTGCt           <  2:161032/149‑1 (MQ=255)                                                                                                                                    cAATAATACCGCGGCGTCACTGGCGTTCAGCGGTACATTGTTGGGTTACGTTATCCCCTTATCCAGTGCGGCAATCAATGCGGTGAGTATTCCAGACTATTTCGCCTGGGGCGGGATTGCACTGGTGATTCAGTTACTCGTTTTTGCTg          >  8:100732/1‑149 (MQ=255)                                                                                                                                            ccGCGGCGTCACTGGCGTTCAGCGGTACATTGTTGGGTTACGTTATCCCCTTATCCAGTGCGGCAATCAATGCGGTGAGTATTCCAGACTATTTCGCCTGGGGCGGGATTGCACTGGTGATTCAGTTACTCGTTTTTGCTGGTGTCAGa  <  6:124701/149‑1 (MQ=255)                                                                                                                                               |                                                                                                                                                  TTTACAATGCATATACTGGATTCACTTCTTGCCTTTAGCGCCTATTTTTTTATTGGCGTGGCTATGGTGATTATTTTTCTGTTTATCTATTCTAAAATTACACCGCACAACGAATGGCAGTTAATCAAAAACAATAATACCGCGGCGTCACTGGCGTTCAGCGGTACATTGTTGGGTTACGTTATCCCCTTATCCAGTGCGGCAATCAATGCGGTGAGTATTCCAGACTATTTCGCCTGGGGCGGGATTGCACTGGTGATTCAGTTACTCGTTTTTGCTGGTGTCAGA  >  NC_000913/4411973‑4412260

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.