Predicted mutation
evidence seq id position mutation freq annotation gene description
JC JC NC_000913 1,293,032 IS1 (–) +8 bp 100% intergenic (‑110/‑488) hns ← / → tdk global DNA‑binding transcriptional dual regulator H‑NS/thymidine kinase/deoxyuridine kinase

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 257908 =NA (NA)61 (0.700) 42/262 NT 100% noncoding (768/768 nt) IS1 repeat region
?NC_000913 = 1293039 0 (0.000)intergenic (‑117/‑488) hns/tdk global DNA‑binding transcriptional dual regulator H‑NS/thymidine kinase/deoxyuridine kinase
* ? NC_000913 1293032 =0 (0.000)70 (0.800) 56/262 NT 100% intergenic (‑110/‑495) hns/tdk global DNA‑binding transcriptional dual regulator H‑NS/thymidine kinase/deoxyuridine kinase
?NC_000913 = 1979270 NA (NA)noncoding (1/768 nt) IS1 repeat region

Only 100 of 145 total aligned reads displayed.

ATGTTGTTCAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGT  >  NC_000913/1292891‑1293187
                                                                                                                                                    |                                                                                                                                                    
cgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTgccg                                                                                                                                                      <  3:155295‑M1/8‑1 (MQ=255)
 gctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTgccgc                                                                                                                                                     <  4:285391‑M1/9‑1 (MQ=255)
 gctgatgtccggcggtgcttttgccgttacgcaccaccccggcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaatacaacatcatacactaaatcattaagttggcagcatcaccTTGTgccgc                                                                                                                                                     >  6:313675‑M1/141‑149 (MQ=255)
   tgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccgtcatacactaaatcagtaagttggcagcatcaccTTGTgccgcc                                                                                                                                                    <  8:75405‑M1/10‑1 (MQ=255)
               gtgcttttgccgttacgcaccaccccgtcagtagctccacaggagggacagctgatagaaacagaagccactggaccacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCttt                                                                                                                                       >  6:117789‑M1/127‑149 (MQ=255)
                  cttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCa                                                                                                                                    >  1:388396‑M1/124‑149 (MQ=255)
                   gTGCTTCTCTTATTGTAGTAATCTAAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttat                                                                                                                                   >  4:20850‑M2/1‑130 (MQ=255)
                   gTGCTTAGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATATTTGATCCTTAAATTCAGTTGTGCAATAGCAAGGAATGTATGGAATTCAAAATTGTTCTTTAGTTGTGGCCTcgtaatgactccaacttag                                                                                                                                   <  2:296963‑M2/149‑20 (MQ=255)
                    tGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttatt                                                                                                                                  >  4:12190‑M2/1‑129 (MQ=255)
                         cGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgata                                                                                                                              >  2:372742‑M2/1‑124 (MQ=255)
                         cGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgata                                                                                                                              >  2:254893‑M2/1‑124 (MQ=255)
                                 gtagtaATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttat                                                                                                                     <  8:198036‑M2/149‑34 (MQ=255)
                                 accaccccgtcaggagctgaacaggacggacagctgagagaaacagaagccactggagcacctcaaacacaccatcatacactaaatcagtaagttggcagcatcaccTTGCGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGaa                                                                                                                     >  6:6600‑M1/109‑149 (MQ=255)
                                    gtaATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGtgtaatgac                                                                                                                                             >  6:111753‑M2/1‑113 (MQ=255)
                                    gtaATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgac                                                                                                                                             <  5:111753‑M2/122‑10 (MQ=255)
                                     taATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCGTTAAATTCAGTTGTGCAATAGCCAGGATTGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactcgaacttattgatagtgttttatgtt                                                                                                                  <  2:166564‑M2/148‑37 (MQ=255)
                                      cccgtcagtagctgatcaggagggacagctgatagaaacagaagccactggagcaactcaaaaacaccatcatacactaaatcagtaagttggcagcataaccTTGTGCCGCCAATAACTATCTTTTCATAAAATTAGCCAGAAAAGAc                                                                                                                <  3:103507‑M1/46‑1 (MQ=255)
                                       aTCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttca                                                                                                                >  6:282668‑M2/1‑110 (MQ=255)
                                        tctcAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgtt                                                                                                                  <  1:58586‑M2/145‑37 (MQ=255)
                                        tctcAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGAAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgtt                                                                                                                  <  1:64307‑M2/145‑37 (MQ=255)
                                        cgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccgtcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGAcgc                                                                                                              >  7:75405‑M1/102‑149 (MQ=255)
                                        cgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGAcgc                                                                                                              <  1:360234‑M1/48‑1 (MQ=255)
                                        cgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGAcgc                                                                                                              >  3:285391‑M1/102‑149 (MQ=255)
                                          tcAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaattactccaacttattgatagtgttttatgttcagat                                                                                                             <  3:4407‑M2/148‑42 (MQ=255)
                                          tcAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagat                                                                                                             <  7:307634‑M2/148‑42 (MQ=255)
                                          tcAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAAATCAGTTGTGCAATAGCCAGGATTGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCAGggtaatgactcccacttatggatagtgttttatgttcagata                                                                                                            <  5:68664‑M2/149‑43 (MQ=255)
                                          tcAAACTTATATTGGGGTGGGTTGTTGAGGTAATAATAGAGCCTGAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTCTTCTTTATTTTGTGCCGggtaatgactcctacttattgattgtgttttatgttccgat                                                                                                             <  2:234523‑M2/148‑42 (MQ=255)
                                            aaaCTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataat                                                                                                          <  7:328977‑M2/149‑45 (MQ=255)
                                            aaaCTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagata                                                                                                            >  7:198036‑M2/1‑105 (MQ=255)
                                               cTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcc                                                                                                       >  8:328977‑M2/1‑102 (MQ=255)
                                                gctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCata                                                                                                        <  7:177509‑M1/54‑1 (MQ=255)
                                                 ctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAg                                                                                                     >  2:360234‑M1/93‑149 (MQ=255)
                                                  tgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGc                                                                                                    <  3:7251‑M1/58‑1 (MQ=255)
                                                   tatTGGGGTGGGTTGTTGAGGTAATAATACAGCCTTAAATTCAGTTGTGCAATAGCCAGGACTGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgat                                                                                                   >  2:318612‑M2/1‑98 (MQ=255)
                                                    aacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGccc                                                                                                  <  7:251231‑M1/60‑1 (MQ=255)
                                                        ggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTAtt                                                                                              <  2:364167‑M1/64‑1 (MQ=255)
                                                         ggttgtTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgacttt                                                                                             >  5:236458‑M2/1‑92 (MQ=255)
                                                         gagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTAtt                                                                                              <  8:168708‑M1/64‑1 (MQ=255)
                                                            ggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTaca                                                                                          <  8:329139‑M1/68‑1 (MQ=255)
                                                                tgttgAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatg                                                                                       >  4:103646‑M2/1‑85 (MQ=255)
                                                                agctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCga                                                                                      <  4:294413‑M1/72‑1 (MQ=255)
                                                                 gttgAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatg                                                                                       <  6:388145‑M2/147‑64 (MQ=255)
                                                                  ctgatagaaacagaagccactggaggacctctaaaactccatcatactctaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCgatg                                                                                    >  6:72213‑M1/76‑149 (MQ=255)
                                                                     atagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGAtt                                                                                 <  5:46336‑M1/77‑1 (MQ=255)
                                                                        taataaTAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccac                                                                              <  7:112792‑M2/149‑73 (MQ=255)
                                                                         aataatAGCGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcttgcagctccacc                                                                             <  5:227188‑M2/149‑74 (MQ=255)
                                                                         aataatAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTAAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttttcatgcagctccacc                                                                             <  3:278607‑M2/149‑74 (MQ=255)
                                                                         aaacagaagccactggagcacctaaaaaacaccatcaaacactaaatcagtaacttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCAATTTCCTCCGATGCTTTCg                                                                              <  2:88121‑M1/80‑1 (MQ=255)
                                                                           acagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCgcag                                                                           <  4:260813‑M1/83‑1 (MQ=255)
                                                                               agagCCTTAAATTCAGTTGTTCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatg                                                                                                         >  8:142656‑M2/1‑70 (MQ=255)
                                                                                gagCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttg                                                                      >  1:138033‑M2/1‑69 (MQ=255)
                                                                                agccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatccccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGt                                                                      <  2:173687‑M1/88‑1 (MQ=255)
                                                                                 gccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatgaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTg                                                                     >  2:53934‑M1/61‑149 (MQ=255)
                                                                                  ccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGt                                                                      <  5:144951‑M1/88‑1 (MQ=255)
                                                                                   ccTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttg                                                                      >  5:316556‑M2/1‑66 (MQ=255)
                                                                                    actggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATATTTTCATAAAATTAGCAAGAAAAGACGCGGCATATAGCCCTATTTACACCTATGATTTCTCAGCACGTGAgg                                                                  <  1:216859‑M1/92‑1 (MQ=255)
                                                                                     ttAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgcctccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaac                                                                 <  3:209387‑M2/149‑86 (MQ=255)
                                                                                     ttAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcaga                                                                                                              <  4:345032‑M2/104‑41 (MQ=255)
                                                                                     ttAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcaga                                                                                                              >  3:345032‑M2/1‑64 (MQ=255)
                                                                                     ctggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGt                                                                 <  8:150884‑M1/93‑1 (MQ=255)
                                                                                         aTTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgaca                                                             >  1:264302‑M2/1‑60 (MQ=255)
                                                                                          ttCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacag                                                            <  7:24232‑M2/149‑91 (MQ=255)
                                                                                             cctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGa                                                                    <  5:326322‑M1/90‑1 (MQ=255)
                                                                                             cctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGa                                                                    >  6:326322‑M1/49‑138 (MQ=255)
                                                                                             aGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacag                                                            <  8:64833‑M2/146‑91 (MQ=255)
                                                                                               tcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTcc                                                       <  5:17793‑M1/103‑1 (MQ=255)
                                                                                                 gtgCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccagcgtttttgagaacgacagcgacttc                                                     <  6:235144‑M2/149‑98 (MQ=255)
                                                                                                     acaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGAtt                                                  <  1:178442‑M1/108‑1 (MQ=255)
                                                                                                     aaTAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtc                                                 <  8:366401‑M2/149‑102 (MQ=255)
                                                                                                      caccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCa                                                >  1:17193‑M1/40‑149 (MQ=255)
                                                                                                         catcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGt                                             <  8:125057‑M1/113‑1 (MQ=255)
                                                                                                           cAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagcc                                           <  8:239717‑M2/149‑108 (MQ=255)
                                                                                                             atacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTcaca                                         >  8:177509‑M1/33‑149 (MQ=255)
                                                                                                                 actaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACAttt                                      <  7:395844‑M1/120‑1 (MQ=255)
                                                                                                                    aaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATg                                  <  6:250616‑M1/124‑1 (MQ=255)
                                                                                                                      ggAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgc                                >  8:112792‑M2/1‑31 (MQ=255)
                                                                                                                             atttgtcagcatcaccTTGTGCCGACAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACAGATTATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTa                         >  2:216859‑M1/17‑149 (MQ=255)
                                                                                                                             agttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTTATTCATGTCACATTTTATGGGGAGAtt                          >  1:298769‑M1/17‑148 (MQ=255)
                                                                                                                             aaaaTTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcc                                                                                                       >  8:360611‑M2/1‑24 (MQ=255)
                                                                                                                              gttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCAt                                               >  5:107039‑M1/16‑126 (MQ=255)
                                                                                                                               aaTTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcaga                       >  5:79622‑M2/1‑22 (MQ=255)
                                                                                                                               aaTTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcaga                       >  5:73664‑M2/1‑22 (MQ=255)
                                                                                                                                tggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCTGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGATGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATc                       >  7:374159‑M1/14‑148 (MQ=255)
                                                                                                                                  gcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTa                    >  4:260558‑M1/12‑149 (MQ=255)
                                                                                                                                    ttCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattca                   >  2:58586‑M2/1‑17 (MQ=255)
                                                                                                                                    ttCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattca                   >  8:307634‑M2/1‑17 (MQ=255)
                                                                                                                                     gcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTAGTTACACCTATGCTTTCGCAGCACGTGAGGTTAAAACTTCATGATTCATGTCACATTTTATGGGGAGATTATCGTAGGc                 <  3:217116‑M1/141‑1 (MQ=255)
                                                                                                                                      catcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCt                <  7:78410‑M1/142‑1 (MQ=255)
                                                                                                                                      catcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCt                <  7:389787‑M1/142‑1 (MQ=255)
                                                                                                                                       tttATTTTGTGCCGggtaatgactccaacttaatgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggt                <  3:317104‑M2/148‑135 (MQ=255)
                                                                                                                                         caccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTgac             <  3:129254‑M1/145‑1 (MQ=255)
                                                                                                                                                tgCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCttt      <  2:178442/149‑1 (MQ=255)
                                                                                                                                                tgCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCttt      <  6:121556/149‑1 (MQ=255)
                                                                                                                                                  ccgccAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCttt      >  7:125406/1‑147 (MQ=255)
                                                                                                                                                  ccgccAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCttt      >  3:237110/1‑147 (MQ=255)
                                                                                                                                                  ccGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgc           <  1:122870‑M2/142‑140 (MQ=255)
                                                                                                                                                  ccGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgc           >  2:122870‑M2/1‑3 (MQ=255)
                                                                                                                                                   cGggtaattactccaacttattgatagtgttttatgttcagataatgcacgatgacattgtcatgcagctccaccgattttgagaacgacatcgacttccgtcccagccgtgccacgggctgcctaagattcaggttaagcccctcatt   <  4:51511‑M2/149‑148 (MQ=255)
                                                                                                                                                    gggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctaaatt  <  5:20777‑M2/149‑149 (MQ=255)
                                                                                                                                                    gccAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTACTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGt  <  6:46336/149‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                    
ATGTTGTTCAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGT  >  NC_000913/1292891‑1293187

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.