BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3876111	133 (1.520)	4 (0.050)	4/242	NT	3.1%	intergenic (+17/+29)	yidX/yidA	putative lipoprotein/sugar phosphate phosphatase
*	?	NC_000913	= 3876122	128 (1.590)	4 (0.050)	4/242	NT	3.1%	intergenic (+28/+18)	yidX/yidA	putative lipoprotein/sugar phosphate phosphatase
Rejected: Frequency below/above cutoff threshold.

Only 100 of 159 total aligned reads displayed.

ATACTATTCACCCAGAGGCATTCCGGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAAC‑GCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAGGTTAGATTTGGTGACAAAGTTCGCCACTTCTTTCACTGAAGGAATAGCGTTATCCATCGCCACACCGACGCCTGCATATTC  >  NC_000913/3875974‑3876268

aTACTATTCACCCAGAGGCATTCCGGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAAC‑GCGTTTATGCt                                                                                                                                                    >  1:101867/1‑149 (MQ=255)

   cTATTCACCCAGAGGCATTCCGGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAAC‑GCGTTTATGCTgtt                                                                                                                                                 >  1:91004‑M2/1‑146 (MQ=255)

   cTATTCACCCAGAGGCATTCCGGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAAC‑GCGTTTATGCTgt                                                                                                                                                  >  5:63206‑M2/1‑146 (MQ=255)

    tATTCACCCAGAGGCATTCCGGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAAC‑GCGTTTATGCTgttt                                                                                                                                                <  2:111373‑M2/149‑5 (MQ=255)

    tATTCACCCAGAGGCATTCCGGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAAC‑GCGTTTATGCTgttt                                                                                                                                                <  7:318731‑M2/149‑5 (MQ=255)

    tATTCACCCAGAGGCATTCCGGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAAC‑GCGTTTATGCTgttt                                                                                                                                                <  4:51476‑M2/149‑5 (MQ=255)

      ttCACCCAGAGGCATTCCGGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAAC‑GCGTTTATGCTgtttg                                                                                                                                               >  1:343736‑M2/1‑143 (MQ=255)

      ttCACCCAGAGGCATTCCGGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAAC‑GCGTTTATGCTgttt                                                                                                                                                >  5:299981‑M2/1‑143 (MQ=255)

         aCCCCGAGGCATTCCGGATGGTGGTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAAC‑GCGTTTATGCTgtttgccc                                                                                                                                            >  4:78016‑M2/1‑140 (MQ=255)

         aCCCAGAGGCATTCCGGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTTCTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAAC‑GCGTTTATGCTgtttgcccg                                                                                                                                           >  5:341648‑M2/1‑140 (MQ=255)

         aCCCAGAGGCATTCCGGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAAC‑GCGTTTATGCTgtttgcccg                                                                                                                                           <  7:124608‑M2/149‑10 (MQ=255)

         aCCCAGAGGCATTCCGGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTGGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAAC‑GCGTTTATGCTgtttgccc                                                                                                                                            >  5:231130‑M2/1‑140 (MQ=255)

           ccAGAGGCATTCCGGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAAC‑GCGTTTATGCTGTTTgcccgcc                                                                                                                                         >  1:373067/1‑149 (MQ=255)

           ccAGAGGCATTCCGGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAAC‑GAGTTTATGCTGTTTgcacgcc                                                                                                                                         >  5:87935/1‑149 (MQ=255)

            cAGAGGCATTCCGGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAAC‑GCGTTTATGCTGTTTgcccgcc                                                                                                                                         >  3:4354/1‑148 (MQ=255)

              gagGCATTCCGGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAAC‑GCGTTTATGCTGTTTGCCCGCCcac                                                                                                                                      <  8:387350/149‑1 (MQ=255)

              gagGCATTCCGGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAAC‑GCGTTTATGCTGTTTGCCCGCCca                                                                                                                                       >  8:230663/1‑148 (MQ=255)

                 gCATTCCGGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAAC‑GCGTTTATGCTGTTTGCCCGCCCACAGa                                                                                                                                   <  1:302924/149‑1 (MQ=255)

                    ttCCGGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAACAGCATAAACGCtttgcccgcttactgatta                                                                                                                                  <  7:278638‑M2/149‑20 (MQ=255)

                    ttCCGGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAAC‑GCGTTTATGCTGTTTGCCCGCCCACAGAtt                                                                                                                                 >  8:285818/1‑148 (MQ=255)

                      ccGGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAAC‑GCGTTTATGCTGTTTGCCCGCCCACAGATTaa                                                                                                                               <  4:150727/148‑1 (MQ=255)

                      ccGGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAAC‑GCGTTTATGCTGTTTGCCCGCCCACAGATTaa                                                                                                                               <  2:260722/148‑1 (MQ=255)

                       cGGATGTTGTTTCCTCAGCATTACTGCCAGTGACTTTTACGCTGTACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACAAATAATCAGTAAGCGGGCAAAC‑GCGTTTATGCTGTTTGCCCGCCCACAGATTAAtt                                                                                                                             <  4:163026/149‑1 (MQ=255)

                       cGGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAAC‑GCGTTTATGCTGTTTGCCCGCCCACAGATTAAtt                                                                                                                             <  6:271572/149‑1 (MQ=255)

                       cGGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAAC‑GCGTTTATGCTGTTTGCCCGCCCACAGATTAAt                                                                                                                              <  8:112875/148‑1 (MQ=255)

                        ggATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAAC‑GCGTTTATGCTGTTTGCCCGCCCACAGATTAATTc                                                                                                                            <  6:46177/149‑1 (MQ=255)

                        ggATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAAC‑GCGTTTATGCTGTTTGCCCGCCCACAGATTAATTc                                                                                                                            <  5:204541/149‑1 (MQ=255)

                         gATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAAC‑GCGTTTATGCTGTTTGCCCGCCCACAGATTAAtt                                                                                                                             >  7:254693/1‑147 (MQ=255)

                         gATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAAC‑GCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCa                                                                                                                           <  2:99562/149‑1 (MQ=255)

                          attgtgtTTCCGCAGCATTACTGCCAGTTACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGTGCAAAC‑GCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAg                                                                                                                          <  2:278631/146‑1 (MQ=255)

                          aTGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAAC‑GCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAg                                                                                                                          <  7:167390/149‑1 (MQ=255)

                                tttCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTTCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAAC‑GCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATa                                                                                                                    <  7:396687/149‑1 (MQ=255)

                                    cGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAAC‑GCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACtt                                                                                                                 <  4:104818/148‑1 (MQ=255)

                                    cGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAAC‑GCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTtc                                                                                                                <  4:148659/149‑1 (MQ=255)

                                         caTTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAAC‑GCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAAt                                                                                                           <  3:169613/149‑1 (MQ=255)

                                          aTTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAAC‑GCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATa                                                                                                          <  6:341432/149‑1 (MQ=255)

                                           ttACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAAC‑GCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAg                                                                                                         >  2:300675/1‑149 (MQ=255)

                                               tGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTACGCGGGCAAAC‑GCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCaaa                                                                                                     >  3:372526/1‑149 (MQ=255)

                                                 ccAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAAC‑GCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAac                                                                                                    <  8:203882/148‑1 (MQ=255)

                                                   aGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAAC‑GCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAacgcc                                                                                                 <  6:137375/149‑1 (MQ=255)

                                                     tGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAAC‑GCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAacgccac                                                                                               >  7:77123/1‑149 (MQ=255)

                                                           ttACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAAC‑GCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATc                                                                                         >  8:403503/1‑149 (MQ=255)

                                                               gCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAAC‑GCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTc                                                                                      >  1:72138/1‑148 (MQ=255)

                                                                cTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAAC‑GCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCaa                                                                                    <  2:267223/149‑1 (MQ=255)

                                                                 tGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAAC‑GCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAg                                                                                   >  1:175630/1‑149 (MQ=255)

                                                                   gACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAAC‑GCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAg                                                                                   <  3:62914/147‑1 (MQ=255)

                                                                     catcatTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAAC‑GCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATc                                                                                         <  7:246689/139‑1 (MQ=255)

                                                                     catcatTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAAC‑GCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATc                                                                                         >  8:246689/1‑139 (MQ=255)

                                                                      atcatTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAAC‑GCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAGGt                                                                                 >  1:126729/1‑146 (MQ=255)

                                                                      atcatTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAAC‑GCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGAAAACGCCACGCCATCTTCAAGGt                                                                                 >  6:169268/1‑146 (MQ=255)

                                                                         atTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAAC‑GCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGc                                                                                                                         >  5:347808/1‑103 (MQ=255)

                                                                         atTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAAC‑GCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAGGTTAGAtt                                                                           >  1:293814/1‑149 (MQ=255)

                                                                         atTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAAC‑GCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAGGTTAGAt                                                                            <  1:94444/148‑1 (MQ=255)

                                                                          ttACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAAC‑GCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAGGTTAGAttt                                                                          >  1:181431/1‑149 (MQ=255)

                                                                            aCTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAAC‑GCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAGGTTAGATTTg                                                                         <  3:123284/148‑1 (MQ=255)

                                                                             cTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAAC‑GCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAGGTTAGATTTgg                                                                        <  2:175630/148‑1 (MQ=255)

                                                                              tGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAACAGCATAAACGCtttgcccgcttactgattattggttta                                                                                                                          <  2:303447‑M2/99‑28 (MQ=255)

                                                                              tGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAACAGCATAAACGCGgttgcccgcttactgattattggttta                                                                                                                         >  1:303447‑M2/1‑72 (MQ=255)

                                                                                cACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAAC‑GCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAGGTTAGATTTGGTGa                                                                     >  7:394825/1‑148 (MQ=255)

                                                                                     cTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAAC‑GCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAGGTTAGATTTGGTGACAAAg                                                                >  4:269317/1‑148 (MQ=255)

                                                                                     cTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAAC‑GCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAGGTTAGATTTGGTGACAAAGt                                                               <  1:189232/149‑1 (MQ=255)

                                                                                          aTTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAAC‑GCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAGGTTAGATTTGGTGACAAAGTTCGc                                                           >  1:281410/1‑148 (MQ=255)

                                                                                           tttCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAACC‑GCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAGGTTAGATTTGGTGACAAAGTTCGCCa                                                         >  8:166576/1‑149 (MQ=255)

                                                                                           tttCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAAC‑GCGTTTATGCTGTTTGCGCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAGGTTAGATTTGGTGACAAAGTTCGCCa                                                         >  3:213787/1‑149 (MQ=255)

                                                                                           tttCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAAC‑GCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAGGTTAGATTTGGTGACAAAGTTCGCCa                                                         <  8:394825/149‑1 (MQ=255)

                                                                                            ttCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAAC‑GCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAGGTTAGATTTGGTGACAAAGTTCGCCAc                                                        >  8:210922/1‑149 (MQ=255)

                                                                                                 gTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAAC‑GCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAg                                                                                   >  3:318519/1‑117 (MQ=255)

                                                                                                 gTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAAC‑GCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAg                                                                                   <  4:318519/117‑1 (MQ=255)

                                                                                                 gTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAAC‑GCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAGGTTAGATTTGGTGACAAAGTTCGCCActtctt                                                   >  5:104611/1‑149 (MQ=255)

                                                                                                  ttGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAAC‑GCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAGGTTAGATTTGGTGACAAAGTTCGCCACTTCttt                                                  <  7:285818/149‑1 (MQ=255)

                                                                                                  ttGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAAC‑GCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAGCTTAGATTTGGTGACAAAGTTCGCCACTTCttt                                                  >  4:84614/1‑149 (MQ=255)

                                                                                                     tataTGCAGTAAACCAATAATCAGTAAGCGGGCAAAC‑GCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAGGTTAGATTTGGTGACAAAGTTCGCCACTTCTTTCa                                                <  7:210922/148‑1 (MQ=255)

                                                                                                     tataTGCAGTAAACCAATAATCAGTAAGCGGGCAAAC‑GCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAGGTTAGATTTGGTGACAAAGTTCGCCACTTCTTTCAc                                               >  5:314936/1‑149 (MQ=255)

                                                                                                     tataTGCAGTAAACCAATAAACAGTAAGCGGGCAAAC‑GCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAGGTTAGATTTGGTGACAAAGTTCGCCACTTCTTTCa                                                <  3:127891/148‑1 (MQ=255)

                                                                                                       tatGCAGTAAACCAATAATCAGTAAGCGGGCAAAC‑GCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAACCGCCACGCCATCTTCAAGGTTAGATTTGGTGACAAAGTTCGCCACTTCTTTCCCt                                              >  2:127692/1‑148 (MQ=255)

                                                                                                        atGCAGTAAACCAATAATCAGTAAGCGGGCAAAC‑GCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAGGTTAGATTTGGTGACAAAGTTCGCCACTTCTTTCACTg                                             >  4:229913/1‑148 (MQ=255)

                                                                                                         tGCAGTAAACCAATAATCAGTAAGCGGGCAAAC‑GCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAGGTTAGATTTGGTGACAAAGTTCGCCACTTCTTTCACTGaa                                           <  3:51476/149‑1 (MQ=255)

                                                                                                           cAGTAAACCAATAATCAGTAAGCGGGCAAAC‑GCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAGGTTAGATTTGGTGACAAAGTTCGCCACTTCTTTCACTGAAg                                          <  2:373067/148‑1 (MQ=255)

                                                                                                            aGTAAACCAATAATCAGTAAGCGGGCAAAC‑GCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAGGTTAGATTTGGTGACAAAGTTCGCCACTTCTTTCACTGAAgg                                         >  5:360373/1‑148 (MQ=255)

                                                                                                             gTAAACCAATAATCAGTAAGCGGGCAAAC‑GCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACAGACTTCTCAATAGCAAACGCCACGCCATCTTCAAGGTTAGATTTGGTGACAAAGTTCGCCACTTCTTTCACTGAAGGaa                                       >  5:297718/1‑149 (MQ=255)

                                                                                                              tAAACCAATAATCAGTAAGCGGGCAAAC‑GCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAGGTTAGATTTGGTGACAAAGTTCGCCACTTCTTTCACTGAAGGaa                                       >  6:31286/1‑148 (MQ=255)

                                                                                                              tAAACCAATAATCAGTAAGCGGGCAAAC‑GCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAGGTTAGATTTGGTGACAAAGTTCGCCACTTCTTTCACTGAAGGAAt                                      <  6:360373/149‑1 (MQ=255)

                                                                                                                aaCCAATAATCAGTAAGCGGGCAAAC‑GCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAGGTTAGATTTGGTGACAAAGTTCGCCACTTCTTTCACTGAAGGAATat                                    >  4:72082/1‑148 (MQ=255)

                                                                                                                aaCCAATAATCAGTAAGCGGGCAAAC‑GCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAGGTTAGATTTGGTGACAAAGTTCGCCACTTCTTTCACTGAAGGAATAg                                    >  1:187119/1‑149 (MQ=255)

                                                                                                                aaCCAATAATCAGTAAGCGGGCAAAC‑GCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAGGTTAGATTTGGTGACAAAGTTCGCCACTTCTTTCACTGAAGGAATAg                                    >  5:13971/1‑149 (MQ=255)

                                                                                                                aaCCAATAATCAGTAAGCGGGCAAAC‑GCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAGGTTAGATTTGGTGACAAAGTTCGCCACTTCTTTCACTGAAGGAATAg                                    >  4:118421/1‑149 (MQ=255)

                                                                                                                 aCCAATAATCAGTAAGCGGGCAAAC‑GCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAGGTTAGATTTGGTGACAAAGTTCGCCACTTCTTTCACTGAAGGAATAGc                                   >  6:173405/1‑149 (MQ=255)

                                                                                                                   cAATAATCAGTAAGCGGGCAAAC‑GCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAGGTTAGATTTGGTGACAAAGTTCGCAACTTCTTTCACTGAAGGAATAGCGt                                 >  6:139820/1‑149 (MQ=255)

                                                                                                                      taatCAGTAAGCGGGCAAAG‑GGGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCTCATTCTTCTCAATAGCAAACGCCACGCGATCTTCAAGGTTAGATTTGGTGACAAAGTTCGCGACTTCTTTCACTGAAGGAATAGCGTTAt                              <  3:84614/149‑1 (MQ=255)

                                                                                                                      taatCAGTAAGCGGGCAAAC‑GCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAGGTTAGATTTGGTGACAAAGTTCGCCACTTCTTTCACTGAAGGAATAGCGTTAt                              <  2:187119/149‑1 (MQ=255)

                                                                                                                            gacacgcggCACAC‑CCGTTTATGCTGTTTGCCCGCCCACCGATAACTTCAGCACAACCTTCTCAATAGCAAACGCCACTCCATCTTCAAGGTTAGATTTGGTGACAAAGTCCGCCCCTTCTTTCACTGAAGGAATAGCGGTATCCATCg                        <  2:65527/142‑1 (MQ=255)

                                                                                                                            gTAAGCGGGCAAAC‑GCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAGGTTAGATTTGGTGACAAAGTTCGCCACTTCTTTCACTGAAGGAATAGCGTTATCCATCg                        >  7:70671/1‑149 (MQ=255)

                                                                                                                             tAAGCGGGCAAAC‑GCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAGGTTAGATTTGGTGACAAAGTTCGCCACTTCTTTCACTGAAGGAATAGCGTTATCCATCGc                       >  1:222163/1‑149 (MQ=255)

                                                                                                                                gCGGGCAAAC‑GCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAGGTTAGATTTGGTGACAAAGTTCGCCACTTCTTTCACTGAAGGAATAGCGTTATCCATCGCca                     >  2:208732/1‑148 (MQ=255)

                                                                                                                                 cGGGCAAAC‑GCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAGGTTAGATTTGGTGACAAAGTTCGCCACTTCTTTCACTGAAGGAATAGCGTTATCCATCGCcaca                   <  3:162377/149‑1 (MQ=255)

                                                                                                                                           gcgTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAGGTTAGATTTGGTGACAAAGTTCGCCACTTCttt                                                  >  4:81202/1‑109 (MQ=255)

                                                                                                                                           gcgTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAGGTTAGATTTGGTGACAAAGTTCGCCACTTCttt                                                  <  3:81202/109‑1 (MQ=255)

                                                                                                                                           gcgTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAGGTTAGATTTGGTGACAAAGTTCGCCACTTCTTTCACTGAAGGAATAGCGTTATCCATCGCCACACCGACGCCt          <  4:306425/149‑1 (MQ=255)

                                                                                                                                             gTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAGGTTAGATTTGGTGACAAAGTTCGCCACTTCTTTCACTGAAGGAATAGCGTTATCCATCGCCACACCGACGCCTGc        <  8:318282/149‑1 (MQ=255)

                                                                                                                                                    cTGTTTGCCCGCCCACAGATTAATTCAGCAAATAATTCTCAATAGCAAACGCCACGCCATCTTCAAGGTTAGATTTGGTGACAAAGTTCGCCACTTCTTTCACTGAAGGAATAGCGTTATCCATCGCCACACCGACGCCTGCATATTc  <  5:169268/148‑1 (MQ=255)

ATACTATTCACCCAGAGGCATTCCGGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAAC‑GCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAGGTTAGATTTGGTGACAAAGTTCGCCACTTCTTTCACTGAAGGAATAGCGTTATCCATCGCCACACCGACGCCTGCATATTC  >  NC_000913/3875974‑3876268

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.