New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4104862 =128 (1.470)3 (0.040) 3/248 NT 2.4% coding (114/1374 nt) cpxA sensory histidine kinase in two‑component regulatory system with CpxR
?NC_000913 4104892 = 124 (1.500)coding (84/1374 nt) cpxA sensory histidine kinase in two‑component regulatory system with CpxR
Rejected: Frequency below/above cutoff threshold.

Only 100 of 161 total aligned reads displayed.

CTTATCAATCGCCCGGAACAGACGCCGCCACCACATTAAATCGTTGGGCGGATCGTTCGCCAGCTCCGCTTCGACATGCTGCTCAATCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCATGAAGCAGAAACCATCAGATAGCCGCGACCACGCAAGGTTTTAAACCACGGGTGACCATCTTTAC  >  NC_000913/4104745‑4105039
                                                                                                                                                   |                                                                                                                                                   
   aTCAATCGCCCGGAACAGACGCCGCCACCACATTAAATCGTTGGGCGGATCGTTCGCCAGCTCCGCTTCGACATGCTGCTCAATCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGt                                                                                                                                                  >  6:332661/1‑148 (MQ=255)
    tCAATCGCCCGGAACAGACGCCGCCACCACATTAAATCGTTGGGCGGATCGTTCGCCAGCTCCGCTTCGACATGCTGCTCAATCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTaa                                                                                                                                                <  4:355904/149‑1 (MQ=255)
     cAATCGCCCGGAACAGACGCCGCCACCACATTAAATCGTTGGGCGGATCGTTCGCCAGCTCCGCTTCGACATGCTGCTCAATCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCACGGTCATCAGGCGTGAATCGAGCTTGGGTaa                                                                                                                                                >  8:302765/1‑148 (MQ=255)
      aaTCCCCCGGAACACACGCCGCCACCACATAAAATCTATGGGCGGATCCTACGCCAGCTCCGCTTCGACATGCAGCTCAATCATAATCCCCTGACGCAGTTCGCTAACCACAAGCACGCTCATCTCGCGTGAATCGAGCAAGGGTAAc                                                                                                                                               >  4:158762/1‑148 (MQ=255)
        tCGCCCGGAACAGACGCCGCCACCACATTAAATCGTTGGGCGGATCGTTCGCCAGCTCCGCTTCGACATGCTGCTCAATCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACAt                                                                                                                                             >  2:364237/1‑148 (MQ=255)
          gCCCGGAACAGACGCCGCCACCACATTAAATCGTTGGGCGGATCGTTCGCCAGCTCCGCTTCGACATGCTGCTCAATCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTg                                                                                                                                                     >  4:359139/1‑138 (MQ=255)
           cccGGAACAGACGCCGCCACCACATTAAATCGTTGGGCGGAACGTTCGCCAGCTCCGCTTCCACATGCTGCTCAATCATCAGCCCCTCACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGATACGAGCATGGGTAAcaacaa                                                                                                                                          >  8:255391/1‑148 (MQ=255)
            ccGGAACAGACGCCGCCACCACATTAAATCGTTGGGCGGATCGTTCGCCAGCTCCGCTTCGACATGCTGCTCAATCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCaaaa                                                                                                                                        >  6:201395/1‑149 (MQ=255)
                aaCAGACGCCGCCACCACATTAAATCGTTGGGCGGATCGTTCGCCAGCTCCGCTTCGACATGCTGCTCAATCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCaa                                                                                                                                    >  1:99177/1‑149 (MQ=255)
                 aCAGACGCCGCCACCACATTAAATCGTTGGGCGGATCGTTCGCCAGCTCCGCTTCGACATGCTGCTCAATCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAAc                                                                                                                                   <  7:302765/149‑1 (MQ=255)
                    gACGCCGCCACCACATTAAATCGTTGGGCGGATCGTTCGCCAGCTCCGCTTCGACATGCTGCTCAATCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATc                                                                                                                                <  3:144034/149‑1 (MQ=255)
                       gccgccACCACATTAAATCGTTGGGCGGATCGTTCGCCAGCTCCGCTTCGACATGCTGCTCAATCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAac                                                                                                                             >  3:368176/1‑149 (MQ=255)
                        ccgccACCACATTAAATCGTTGGGCGGATCGTTCGCCAGCTCCGCTTCGACATGCTGCTCAATCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAaca                                                                                                                            <  3:33326/149‑1 (MQ=255)
                         cgccACCACATTAAATCGTTGGGCGGATCGTTCGCCAGCTCCGCTTCGACATGCTGCTCAATCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAacac                                                                                                                           <  4:242015/149‑1 (MQ=255)
                           tgcttcatgataggcagcttaaccgcgcgcatcttcgccatcttctggctgacgctggcgctggtgttgatgttggtcttgatgttacccAAGCTCGGTCATCTGGCGTGAATCGAGCTTggg                                                                                                                                                   <  2:110007‑M1/33‑1 (MQ=255)
                           tgcttcatgataggcagcttaaccgcgcgcatcttcgccatcttctggctgacgctggcgctggtgttgatgttggtcttgatgttacccAAGCTCGGTCATCTGGCGTGAATCGAGCTTggg                                                                                                                                                   >  1:110007‑M1/91‑123 (MQ=255)
                            caccacATTAAATCGTTGGGCGGATCGTTCGCCAGCTCCGCTTCGACATGCTGCTCAATCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACAccag                                                                                                                        >  6:383361/1‑149 (MQ=255)
                             accacATTAAATCGTTGGGCGGATCGTTCGCCAGCTCCGCTTCGACATGCTGCTCAATCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACAccagc                                                                                                                       <  5:23189/149‑1 (MQ=255)
                             accacATTAAATCGTTGGGCGGATCGTTCGCCAGCTCCGCTTCGACATGCTGCTCAATCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACAccagc                                                                                                                       <  4:24846/149‑1 (MQ=255)
                             accacATTAAATCGTTGGGCGGATCGTTCGCCAGCTCCGCTTCGACATGCTGCTCAATCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACAccagc                                                                                                                       <  7:264162/149‑1 (MQ=255)
                              ccacATTAAATCGTTGGGCGGATCGTTCGCCAGCTCCGCTTCGACATGCTGCTCAATCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACAccagcg                                                                                                                      >  3:43619/1‑149 (MQ=255)
                               cacaTTAAATCGTTGGGCGGATCGTTCGCCAGCTCCGCTTCGACATGCTGCTCAATCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACAccagcgc                                                                                                                     >  3:134893/1‑149 (MQ=255)
                                 caTTAAATCGTTGGGCGGATCGTTCGCCAGCTCCGCTTCGACATGCTGCTCAATCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCCAACCCAACATCCACAccagcgc                                                                                                                     >  2:247185/1‑147 (MQ=255)
                                   ttAAATCGTTGGGCGGATCGTTCGCCAGCTCCGCTTCGACATGCTGCTCAATCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACAccagcgccagc                                                                                                                 >  7:132516/1‑149 (MQ=255)
                                      aaTCGTTGGGCGGATCGTTCGCCAGCTCCGCTTCGACATGCTGCTCAATCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGt                                                                                                               >  5:388535/1‑148 (MQ=255)
                                       aTCGTTGGGCGGATCGTTCGCCAGCTCCGCTTCGACATGCTGCTCAATCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGt                                                                                                               >  3:146617/1‑147 (MQ=255)
                                          gTTGGGCGGATCGTTCGCCAGCTCCGCTTCGACATGCTGCTCAATCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGc                                                                                                           <  5:233014/148‑1 (MQ=255)
                                           ttGGGCGGATCGTTCGCCAGCTCCGCTTCGACATGCTGCTCAATCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCa                                                                                                         <  4:146617/149‑1 (MQ=255)
                                            tGGGCGGATCGTTCGCCAGCTCCGCTTCGACATGCTGCTCAATCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCag                                                                                                        <  6:30747/149‑1 (MQ=255)
                                              ggCGGATCGTTCGCCAGCTCCGCTTCGACATGCTGCTCAATCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCagaa                                                                                                      <  5:383361/149‑1 (MQ=255)
                                                cGGATCGTTCGCCAGCTCCGCTTCGACATGCTGCTCAATCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCagaaga                                                                                                    <  5:201395/149‑1 (MQ=255)
                                                 ggATCGTTCGCCAGCTCCGCTTCGACATGCTGCTCAATCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGAt                                                                                                   >  2:154817/1‑149 (MQ=255)
                                                      gTTCGCCAGCTCCGCTT‑‑ACATGCTGCTCAATCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGaa                                                                                             <  8:126410/148‑1 (MQ=255)
                                                          gCCTGCTCCGCTTCGACATGCTGCTCAATCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGa                                                                                           <  3:271124/148‑1 (MQ=255)
                                                          gCCAGCTCCGCTTCGACATGCTGCTCAATCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGAt                                                                                                   >  3:233108/1‑140 (MQ=255)
                                                          gCCAGCTCCGCTTCGACATGCTGCTCAATCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGAt                                                                                          <  6:245792/149‑1 (MQ=255)
                                                          gCCAGCTCCGCTTCGACATGCTGCTCAATCATCAGCCCCTGACGCTGTTCGCTATCAAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATAAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGAt                                                                                          >  8:4648/1‑149 (MQ=255)
                                                          gCCAGCTCCGCTGCGACATGCTGCTCACTCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGCTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGa                                                                                           <  5:118046/148‑1 (MQ=255)
                                                                tCCGCTTCGACATGCTGCTCAATCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATgcgcgc                                                                                    >  2:265798/1‑149 (MQ=255)
                                                                   gCTTCGACATGCTGCTCAATCATCAGCCCCTGACGCTGGTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGt                                                                                 <  3:261207/149‑1 (MQ=255)
                                                                        gACATGCTGCTCAATCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAac                                                                                                                             >  8:153585/1‑100 (MQ=255)
                                                                           aTGCTTCTCAATCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAAGATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGc                                                                         <  1:48730/149‑1 (MQ=255)
                                                                              ctgctCAATCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTa                                                                      >  5:112175/1‑149 (MQ=255)
                                                                               tgctCAATCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGtt                                                                                >  5:276793/1‑138 (MQ=255)
                                                                               tgctCAATCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTa                                                                      >  5:134306/1‑148 (MQ=255)
                                                                                 ctCAATCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTTCCTATCa                                                                   <  2:43040/149‑1 (MQ=255)
                                                                                  tCAATCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAACACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCAAAGATGCGCGCGGTTAAGCTGCCTATCAt                                                                  >  3:102314/1‑149 (MQ=255)
                                                                                    aaTCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACCTCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCAt                                                                  <  7:255879/147‑1 (MQ=255)
                                                                                    aaTCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATg                                                                                                  >  1:276570/1‑115 (MQ=255)
                                                                                    aaTCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATg                                                                                                  <  2:276570/115‑1 (MQ=255)
                                                                                    aaTCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCAt                                                                  <  4:70580/147‑1 (MQ=255)
                                                                                    aaTCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCAt                                                                  <  5:332661/147‑1 (MQ=255)
                                                                                    aaTCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCATg                                                                 >  3:259252/1‑148 (MQ=255)
                                                                                     atcatcAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCATg                                                                 >  7:209074/1‑147 (MQ=255)
                                                                                     atcatcAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCATGaa                                                               <  6:388535/149‑1 (MQ=255)
                                                                                        atcaGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCATGAAg                                                              >  1:372947/1‑147 (MQ=255)
                                                                                        atcaGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCATGAAGCa                                                            <  8:132516/149‑1 (MQ=255)
                                                                                        atcaGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGAGCGCGGTTAAGCTGCCTATCATGAAGc                                                             <  2:88651/148‑1 (MQ=255)
                                                                                             ccccTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCATGAAGCAGAAAc                                                       >  4:197351/1‑149 (MQ=255)
                                                                                              cccTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCATGAAGCAGAAAc                                                       >  4:216391/1‑148 (MQ=255)
                                                                                               ccTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTgg                                                                                                                                                    >  3:111464/1‑54 (MQ=255)
                                                                                                cTGACGCTGTTCGCTATCCGGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCGAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCATGAAGCAGAAACCAt                                                    >  6:138244/1‑149 (MQ=255)
                                                                                                 tGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGa                                                                                           <  3:78588/109‑1 (MQ=255)
                                                                                                 tGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGa                                                                                           >  4:78588/1‑109 (MQ=255)
                                                                                                   aCGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCATGAAGCAGAAACCATc                                                   <  3:197351/147‑1 (MQ=255)
                                                                                                   aCGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCATGAAGCAGAAACCATc                                                   <  4:118633/147‑1 (MQ=255)
                                                                                                   aCGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCATGAAGCAGAAACCATc                                                   <  2:111873/147‑1 (MQ=255)
                                                                                                   aCGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGAGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAACGACAGCGTCAGCCAGAAGATGCCGAAGATGAGCGCGGTTAAGCTGCCTATAATGAAGCAGAAACCAt                                                    >  4:197032/1‑146 (MQ=255)
                                                                                                     gCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCATGAAGCAGAAACCATCa                                                  >  8:324480/1‑146 (MQ=255)
                                                                                                     gCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCATGAAGCAGAAACCATCa                                                  <  7:324480/146‑1 (MQ=255)
                                                                                                      cTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCATGAAGCAGAAACCATCAGa                                                >  1:125819/1‑147 (MQ=255)
                                                                                                         ttCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCa                                                                                                             >  4:371829/1‑83 (MQ=255)
                                                                                                            gCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGGAACATCAAAACCAACAACAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCAATCATGAAGCAGAAACCATCAGATAGAcgcg                                        >  5:288220/1‑149 (MQ=255)
                                                                                                              tATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCATGAAGCAGAAACCATCAGATAGCCGCGAc                                      >  8:371039/1‑149 (MQ=255)
                                                                                                              tATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCATGAAGCAGAAACCATCAGATAGCCGCGAc                                      >  8:306435/1‑149 (MQ=255)
                                                                                                                  cccaagctcgattcacgccagatgaccgagcttGGGTAACATCAAGACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCATGAAGCa                                                            >  1:110007‑M2/34‑123 (MQ=255)
                                                                                                                  cAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCATGAAg                                                              <  8:138308/121‑1 (MQ=255)
                                                                                                                  cAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCATGAAg                                                              >  7:138308/1‑121 (MQ=255)
                                                                                                                  cAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCATGAAGCAGAAACCATCAGATAGCCGCGACCAc                                   <  2:372947/148‑1 (MQ=255)
                                                                                                                   ccaagctcgattcacgccagatgaccgagcttGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCATGAAGCAGAAACCATCAGATAGCCGCGACCACg                                  >  5:28839‑M2/33‑148 (MQ=255)
                                                                                                                         TCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCATGAAGCAGAAACCATCAGATAGCCGCGACCACGCAAGGtt                           <  5:210569‑M1/149‑1 (MQ=255)
                                                                                                                          CGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCATGAAGCAGAAACCATCAGATAGCCGCGACCACGCAAGGttt                          <  1:79625‑M1/149‑1 (MQ=255)
                                                                                                                           GGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCATGAAGCAGAAACCATCAGATAGCCGCGACCACGCAAGGttt                          >  3:216391‑M1/1‑148 (MQ=255)
                                                                                                                           GGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCATGAAGCAGAAACCATCAGATAGCCGCGACCACGCAAGGttt                          >  2:300856‑M1/1‑148 (MQ=255)
                                                                                                                            gTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCATGAAGCAGAAACCATCAGATAGCCGCGACCACGCAAGGTTTTa                        <  7:371039/149‑1 (MQ=255)
                                                                                                                            gTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGATGCCTAGCAGGAAGCAGAAACCATCAGAAACCCGCGCCCCCGCAAGGtttt                         >  8:382704/1‑148 (MQ=255)
                                                                                                                            gTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATAGCGAAGATGCGCGCGGTTAAGCTGCCTATCATGAAGCAGAAACCATCAGATAGACGCGACCACGCAAGGTTTTa                        <  7:4648/149‑1 (MQ=255)
                                                                                                                                    gCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGGGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCATGAAGCAGAAACCATCAGATAGCCGCGACCACGCAAGGTTTTAAACCACgg                <  5:286541/149‑1 (MQ=255)
                                                                                                                                    gCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCATGAAGCAGAAACCATCAGATAGCCGCGACCACGCAAGGTTTTAAACCAc                  <  6:210569/147‑1 (MQ=255)
                                                                                                                                    gCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCATGAAGCAGAAACCATCAGATAGCCGCGACCACGCAAGGTTTTAAACCACgg                <  2:79625/149‑1 (MQ=255)
                                                                                                                                    gCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCATGAAGCAGAAACCATCAGATAGCCGCGACCACGCAAGGTTTTAAACCACgg                <  1:247185/149‑1 (MQ=255)
                                                                                                                                      gTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCATGAAGCAGAAACCATCAGATAGCCGCGACCACGCAAGGTTTTAAACCACGGGt              >  1:114247/1‑149 (MQ=255)
                                                                                                                                       tGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGCTGCGCGCGGTTAAGCTGCCTATCATGAAGCAGCACCCATCAGATAGCCGCGACCACGCAAGGTGTTAAACCACGGGTg             >  1:296170/1‑149 (MQ=255)
                                                                                                                                        gAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCATGAAGCAGAAACCATCAGATAGCCGCGACCACGCAAGGTTTTAAACCACGGGTGa            >  5:88393/1‑149 (MQ=255)
                                                                                                                                            cgagcttGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCACCCAGAAGATGGCGAAGATGCGCGCGGTTACGCTGCCTATCTTGAAGCAGAAACCATCAGATAGCAGCGCCCACTCAAGGTATTAACCCACGGGTGACCAt        >  6:126462‑M2/8‑149 (MQ=255)
                                                                                                                                              agcttGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCATGAAGCAGAAACCATc                                                   <  8:106896‑M2/99‑1 (MQ=255)
                                                                                                                                              agcttGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCATGAAGCAGAAACCATc                                                   >  7:106896‑M2/6‑104 (MQ=255)
                                                                                                                                                cttGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCATGAAGCAGAAACCATCAGATAGCCGCGACCACGCAAGGTTTTAAACCACGGGTGACCATCttt    <  6:100651‑M2/146‑1 (MQ=255)
                                                                                                                                                   gggTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCATGAAGCAGAAACCATCAGATAGCCGCGACCACGCAAGGTTTTAAACCACGGGTGACCATCTTTa   <  1:154817/147‑1 (MQ=255)
                                                                                                                                                   gggTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCATGAAGCAGAAACCATCAGATAGCCGCGACCACGCAAGGTTTTAAACCACGGGTGACCATCTTTAc  >  1:225495/1‑148 (MQ=255)
                                                                                                                                                   |                                                                                                                                                   
CTTATCAATCGCCCGGAACAGACGCCGCCACCACATTAAATCGTTGGGCGGATCGTTCGCCAGCTCCGCTTCGACATGCTGCTCAATCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCATGAAGCAGAAACCATCAGATAGCCGCGACCACGCAAGGTTTTAAACCACGGGTGACCATCTTTAC  >  NC_000913/4104745‑4105039

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.