New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1742580	50 (0.580)	4 (0.050)	4/246	NT	7.8%	intergenic (+19/+21)	cfa/ribC	cyclopropane fatty acyl phospholipid synthase, SAM‑dependent/riboflavin synthase, alpha subunit
	?	NC_000913	= 1742585	48 (0.590)					intergenic (+24/+16)	cfa/ribC	cyclopropane fatty acyl phospholipid synthase, SAM‑dependent/riboflavin synthase, alpha subunit

TGAACGCTTTAAACGAATGTTTACCTATTATCTGAATGCCTGTGCAGGTGCTTTCCGCGCCCGTGATATTCAGCTCTGGCAGGTCGTGTTCTCACGCGGTGTTGAAAACGGCCTTCGAGTGGCTCGCTAAAGGCTATTCTATCGCCCCCTCTCCGGGGGCGATTTCAGATCAGGCTTCTGTGCCTGGTTGATTCATGGCATTTTCTCGTGCCGCCAGCACACGTTCTACCGTATCTACCACTGCCTGAGTTTGTGGATCGATTTCAATGTTGACGCGTGCGCCAAGTTTTTTC  >  NC_000913/1742432‑1742724                                                                                                                                                     |                                                                                                                                                 tGAACGCTTTAAACGAATGTTTACCTATTATCTGAATGCCTGTGCAGGTGCTTTCCGCGCCCGTGATATTCAGCTCTGGCAGGTCGTGTTCTCACGCGGTGTTGAAAACGGCCTTCGAGTGGCTCGCTAAAGGCTATTCTATCGCCCCC                                                                                                                                                  >  3:233873‑M1/1‑149 (MQ=255)   caCGCTATAAACGAATGTTTACCTATTATCTGAATGCCTGTGCAGGTGCTTTCCGCGCCCGTGATATTCAGCGCTGGCAGGTCGTGATCTCAAGCGGTGTTGAAAACGGCCTTCGAGTGGCTCTCTAAAGGCTATTCTATCGCCCCctc                                                                                                                                                >  2:326221/2‑149 (MQ=255)     cGCTTTAAACGAATGGTTACCTATTATCTGAATGCCTGTGCAGGTGCTTTCCGCGCCCGTGATATTCAGCTCTGGCAGGTCGTGTTCTCACGCGGTGTTGAAAACGGCCTTCGAGTGGCTCGCTAAAGGCTATTCTATCGCCCCCtctc                                                                                                                                              >  5:372834/1‑149 (MQ=255)            aaCGAATGTTTACCTATTATCTGAATGCCTGTGCAGGTGCTTTCCGCGCCCGTGATATTCAGCTCTGGCAGGTCGTGTTCTCACGCGGTGTTGAAAACGGCCTTCGAGTGGCTCGCTAAAGGCTATTCTATCGCCCCCTCTCCgggggc                                                                                                                                       >  5:132400‑M2/1‑143 (MQ=255)            aaCGAATGTTTACCTATTATCTGAATGCCTGTGCAGGTGCTTTCCGCGCCCGTGATATTCAGCTCTGGCAGGTCGTGTTCTCACGCGGTGTTGAAAACGGCCTTCGAGTGGCTCGCTAAAGGCTATTCTATCGCCCCCTCTCCggggg                                                                                                                                        >  3:221163‑M2/1‑143 (MQ=255)             aCGAATGTTTACCTATTATCTGAATGCCTGTGCAGGTGCTTTCCGCGCCCGTGATATTCAGCTCTGGCAGGTCGTGTTCTCACGCGGTGTTGAAAACGGCCTTCGAGTGGCTCGCTAAAGGCTATTCTATCGCCCCCTCTCCgggggc                                                                                                                                       <  8:178043‑M2/148‑7 (MQ=255)             aCGAATGTTTACCTATTATCTGAATGCCTGTGCAGGTGCTTTCCGCGCCCGTGATATTCAGCTCTGGCAGGACGTGTTCTCACGCGGTGTTGAAAACGGCCTTCGAGTGGCTCGCTAAAGGCTATTCTATCGCCCCCTCTCCgggggc                                                                                                                                       <  1:44554‑M2/148‑7 (MQ=255)                aaTGTTTACCTATTATCTGAATGCCTGTGCAGGTGCTTTCCGCGCCCGTGATATTCAGCTCTGGCAGGTCGTGTTCTCACGCGGTGTTGAAAACGGCCTTCGAGTGGCTCGCTAAAGGCTATTCTATCGCCCCCTCTCCGGGGGCGAtt                                                                                                                                   >  1:333336/1‑149 (MQ=255)                  tGTTTACCTATTATCTGAATGCCTGTGCAGGTGCTTTCCGCGCCCGTGATATTCAGCTCTGGCAGGTCGTGTTCTCACGCGGTGTTGAAAACGGCCTTCGAGTGGCTCGCTAAAGGCTATTCTATCGCCCCCTCTCCGGGGGCGATTTc                                                                                                                                 <  4:70777/149‑1 (MQ=255)                       aCCTATTATCTGAATGCCTGTGCAGGTGCTTTCCGCGCCCGTGATATTCAGCTCTGGCAGGTCGTGTTCTCACGCGGTGTTGAAAACGGCCTTCGAGTGGCTCGCTAAAGGCTATTCTATCGCCCCCTCTCCGGGGGCGAttt                                                                                                                                  >  8:45718/1‑143 (MQ=255)                       aCCTATTATCTGAATGCCTGTGCAGGTGCTTTCCGCGCCCGTGATATTCAGCTCTGGCAGGTCGTGTTCTCACGCGGTGTTGAAAACGGCCTTCGAGTGGCTCGCTAAAGGCTATTCTATCGCCCCCTCTCCGGGGGCGAttt                                                                                                                                  <  7:45718/143‑1 (MQ=255)                        ccTATTATCTGAATGCCTGTGCAGGTGCTTTCCGCGCCCGTGATATTCAGCTCTGGCAGGTCGTGTTCTCACGCGGTGTTGAAAACGGCCTTCGAGTGGCTCGCTAAAGGCTATTCTATCGCCCCCTCTCCGGGGGCGATTTCAGATCa                                                                                                                           <  5:130311/149‑1 (MQ=255)                         cTATTATCTGAATGCCTGTGCAGGTGCTTTCCGCGCCCGTGATATTCAGCTCTGGCAGGTCGTGTTCTCACGCGGTGTTGAAAACGGCCTTCGAGTGGCTCGCTAAAGGCTATTCTATCGCCCCCTCTCCGGGGGCGATTTCAGATCAg                                                                                                                          >  7:3893/1‑149 (MQ=255)                           attatCTGAATGCCTGTGCAGGTGCTATCCGCGCCCGTGATATTCAGCTCTGGCAGGTCGTGTTCTCACGCGGTGTTGAAAACGGCCTTCGAGTGGCTCGCTAAAGGCTATTCTATCGCCCACTCTCCGGGGGCGATTTCAGATCAGGc                                                                                                                        >  7:139834/1‑149 (MQ=255)                            ttatCTGAATGCCTGTGCAGGTGCTTTCCGCGCCCGTGATATTCAGCTCTGGCAGGTCGTGTTCTCACGCGGTGTTGAAAACGGCCTTCGAGTGGCTCGCTAAAGGCTATTCTATCGCCCCCTCTCCGGGGGCGATTTCAGATCAgg                                                                                                                         <  5:74943/147‑1 (MQ=255)                              atCTGAATGCCTGTGCAGGTGCTTTCCGCGCCCGTGATATTCCGCTCTGGCAGGTCGTGTTCTCACGCGGTGTTGAAAACGGCCTTCGAGTGGCTTGCTAAAGGCTATTCTATCGCCCCCTCTCCGGGGGCGATTTCAGATCAGGCtt                                                                                                                      <  4:614/148‑1 (MQ=255)                              atCTGAATGCCTGTGCAGGTGCTTTCCGCGCCCGTGATATTCAGCTCTGGCAGGTCGTGTTCTCACGCGGTGTTGAAAACGGCCTTCGAGTGGCTCGCTAAAGGCTATTCTATCGCCCCCTCTCCGGGGGCGATTTCAGATCAGGCTTc                                                                                                                     >  1:284737/1‑149 (MQ=255)                               tCTGAATGCCTGTGCAGGTGCTTTCCGCGCCCGTGATATTCAGCTCTGGCAGGTCGTGTTCTCACGCGGTGTTGAAAACGGCCTTCGAGTGGCTCGCTAAAGGCTATTCTATCGCCCCCggagagggggcgatagaat                                                                                                                               <  4:326410‑M1/138‑20 (MQ=255)                               tCTGAATGCCTGTGCAGGTGCTTTCCGCGCCCGTGATATTCAGCTCTGGCAGGTCGTGTTCTCACGCGGTGTTGAAAACGGCCTTCGAGTGGCTCGCTAAAGGCTATTCTATCGCCCCCggagagggggcgatagaat                                                                                                                               >  3:326410‑M1/1‑119 (MQ=255)                                 tGAATGCCTGTGCAGGTGCTTTCCGCGCCCGTGATATTCAGCTCTGGCAGGTCGTGTTCTCACGCGGTGTTGAAAACGGCCTTCGAGTGGCTCGCTAAAGGCTATTCTATCGCCCCCTCTCCGGGGGCGATTTCAGATCAGGCTTCtgt                                                                                                                  >  5:296866/1‑149 (MQ=255)                                   aaTGCCTGTGCAGGTGCTTTCCGCGCCCGTGATATTCAGCTCTGGCAGGTCGTGTTCTCACGCGGTGTTGAAAACGGCCTTCGAGTGGCTCGCTAAAGGCTATTCTATCGCCCCCTCTCCGGGGGCGATTTCAGATCAGGCTTCtgt                                                                                                                  <  2:284737/147‑1 (MQ=255)                                   aaTGCCTGTGCAGGTGCTTTCCGCGCCCGTGATATTCAGCTCTGGCAGGTCGTGTTCTCACGCGGTGTTGAAAACGGCCTTCGAGTGGCTCGCTAAAGGCTATTCTATCGCCCCCTCTCCGGGGGCGATTTCAGATCAGGCTTCTGTGc                                                                                                                <  6:372834/149‑1 (MQ=255)                                       ccTGTGCAGGTGCTTTCCGCGCCCGTGATATTCAGCTCTGGCAGGTCGTGTTCTCACGCGGTGTTGAAAACGGCCTTCGAGTGGCTCGCTAAAGGCTATTCTATCGCCCCCTCTCCGGGGGCGATTTCAGATCAGGCTTCTGTGCCTgg                                                                                                            <  2:333336/149‑1 (MQ=255)                                        cTGTGCAGGTGCTTTCCGCGCCCGTGATATTCAGCTCTGGCAGGTCGTGTTCTCACGCGGTGTTGAAAACGGCCTTCGAGTGGCTCGCTAAAGGCTATTCTATCGCCCCCTCTCCGGGGGCGATTTCAGATCAGGCTTCTGTGCCTGGt                                                                                                           <  7:160126/149‑1 (MQ=255)                                              aGGTGCTTTCCGCGCCCGTGATATTCAGCTCTGGCAGGTCGTGTTCTCACGCGGTGTTGAAAACGGCCTTCGAGTGGCTCGCTAAAGGCTATTCTATCGCCCCCTCTCCGGGGGCGATTTCAGATCAGGCTTCTGTGCCTGGTTGAtt                                                                                                      >  3:55768/1‑148 (MQ=255)                                                gTGCTTTCCGCGCCCGTGATATTCAGCTCTGGCAGGTCGTGTTCTCACGCGGTGTTGAAAACGGCCTTCGAGTGGCTCGCTAAAGGCTATTCTATCGCCCCCTCTCCGGGGGCGATTTCAGATCAGGCTTCTGTGCCTGGTTGATTCAt                                                                                                   >  4:254131/1‑149 (MQ=255)                                                 ttcTTTCCGCGCCCGTGATATTGAGCTCTGGCTGGTCGTGTTCTCACGCTGTGTTGAAAACGGCCTTCGAGTGGCGCGCTAAAGGCTATTCTATCGCCCCCTCTCCGGGGGCGATTTCAGATCAGGCTTCTGTGCCTGGTTGATTCAt                                                                                                   <  4:233873/146‑1 (MQ=255)                                                 tGCTTTCCGCGCCCGTGATATTCAGCTCTGGCAGGTCGTGTTCTCACGCGGTGTTGAAAACGGCCTTCGAGTGGCTCGCTAAAGGCTATTCTATCGCCCCCTCTCCGGGGGCGATTTCAGATCAGGCTTCTGTGCCTGGTTGATTCATg                                                                                                  <  2:389106/149‑1 (MQ=255)                                                    tttCCGCGCCCGTGATATTCAGCTCTGGCAGGTCGTGTTCTCACGCGGTGTTGAAAACGGCCTTCGAGTGGCTCGCTAAAGGCTATTCTATCGCCCCCTCTCCGGGGGCGATTTCAGATCAGGCTTCTGTGCCTGGTTGATTCATGGCa                                                                                               >  1:383904/1‑149 (MQ=255)                                                           gcCCGTGATATTCAGCTCTGGCAGGTCGTGTTCTCACGCGGTGTTGAAAACGGCCTTCGAGTGGCTCGCTAAAGGCTATTCTATCGCCCCCTCTCCGGGGGCGATTTCAGATCAGGCTTCTGTGCCTGGTTGATTCATGGCATTTtctc                                                                                        <  2:184630/149‑1 (MQ=255)                                                            cccGTGATATTCAGCTCTGGCAGGTCGTGTTCTCACGCGGTGTTGAAAACGGCCTTCGAGTGGCTCGCTAAAGGCTATTCTATCGCCCCCTCTCCGGGGGCGATTTCAGATCAGGCTTCTGTGCCTGGTTGATTCATGGCATTTTCTCg                                                                                       <  6:296866/149‑1 (MQ=255)                                                                tGATATTCAGCTCTGGCAGGTCGTGTTCTCACGCGGTGTTGAAAACGGCCTTCGAGTGGCTCGCTAAAGGCTATTCTATCGCCCCCTCTCCGGGGGCGATTTCAGATCAGGCTTCTGTGCCTGGTTGATTCATGGCATTTTCTCGTgcc                                                                                   <  7:178043/149‑1 (MQ=255)                                                                 gATATTCAGCTCTGGCAGGTCGTGTTCTCACGCGGTGTTGAAAACGGCCTTCGAGTGGCTCGCTAAAGGCTATTCTATCGCCCCCTCTCCGGGGGCGATTTCAGa                                                                                                                              <  7:127707/105‑1 (MQ=255)                                                                 gATATTCAGCTCTGGCAGGTCGTGTTCTCACGCGGTGTTGAAAACGGCCTTCGAGTGGCTCGCTAAAGGCTATTCTATCGCCCCCTCTCCGGGGGCGATTTCAGa                                                                                                                              >  8:127707/1‑105 (MQ=255)                                                                     ttCAGCTCTGGCAGGTCGTGTTCTCACGAGGTGTTCAAACCGGCCATCGAGTGGCTCCCTAAAGGCTATTCTATCGCCCCCTCTCCGGGGGCGATATAAAATCAGGCTTCTCTACCACGTTAATTCATGGAAATTTCTAGTgccga                                                                                 >  8:352695/1‑145 (MQ=255)                                                                       cAGCTCTGGCAGGTCGTGTTCTCACGCGGTGTTGAAAACGGCCTTCGAGTGGCTCGCTAAAGGCTATTCTATCGCCCCCTCTCCGGGGGCGATTTCAGATCAGGCTTCTGTGCCTGGTTGATTCATGGCATTTTCTCGTGCCGCCAGca                                                                            >  5:223826/1‑149 (MQ=255)                                                                        aGCTCTGGCAGGTCGTGTTCTCACGCGGTGTTGAAAACGGCCTTCGAGTGGCTCGCTAAAGGCTATTCTATCGCCCCCTCTCCGGGGGCGATTTCAGATCAGGCTTCTGTGCCTGGTTGATTCATGGCATTTTCTCGTGCCGCCAGcac                                                                           >  3:18646/1‑149 (MQ=255)                                                                             tGGCAGGTCGTGTTCTCACGCGGTGTTGAAAACGGCCTTCGAGTGGCTCGCTAAAGGCTATTCTATCGCCCCCGGAGAgggggcgatagaatagc                                                                                                                            <  1:364761‑M2/95‑18 (MQ=255)                                                                             tGGCAGGTCGTGTTCTCACGCGGTGTTGAAAACGGCCTTCGAGTGGCTCGCTAAAGGCTATTCTATCGCCCCCGGAGAgggggcgatagaatagc                                                                                                                            >  2:364761‑M2/1‑78 (MQ=255)                                                                               gCAGGTCGTGTTCTCACGCGGTGTTGAAAACGGCCTTCGAGTGGCTCGCTAAAGGCTATTCTATCGCCCCCTCTCCGGGGGCGATTTCAGATCAGGCTTCtgt                                                                                                                  <  3:283193/103‑1 (MQ=255)                                                                               gCAGGTCGTGTTCTCACGCGGTGTTGAAAACGGCCTTCGAGTGGCTCGCTAAAGGCTATTCTATCGCCCCCTCTCCGGGGGCGATTTCAGATCAGGCTTCtgt                                                                                                                  >  4:283193/1‑103 (MQ=255)                                                                                 aGGTCGTGTTCTCACGCGGTGTTGAAAACGGCCTTCGAGTGGCTCGCTAAAGGCTATTCTATCGCCCCCTCTCCGGGGGCGATTTCAGCTCAGGCTTCTGTGCCTGGTTGATTCATGGCATTTTCTCGTGCCGCCAGCACACGTTCTAc                                                                  >  3:268774/1‑149 (MQ=255)                                                                                  ggTCGTGTTCTCACGCGGTGTTGAAAACGGCCTTCGAGTGGCTCGCTAAAGGCTATTCTATCGCCCCCTCTCCGGGGGCGATTTCAGATCAGGCTTCTGTGCCTGGTTGATTCATGGCATTTTCTCGTGCCGCCAGCACACGTTCTAcc                                                                 <  6:223826/149‑1 (MQ=255)                                                                                       tgtTCTCACGCGGTGTTGAAAACGGCCTTCGAGTGGCTCGCTAAAGGCTATTCTATCGCCCCCTCTCCGGGGGCGATTTCAGATCAGGCTTCTGTGCCTGGTTGATTCATGGCATTTTCTCGTGCCGCCAGCACACGTTCTACCGTATc                                                            <  4:55768/149‑1 (MQ=255)                                                                                       tgtTCTCACGCGGTGTTGAAAACGGCCTTCGAGTGGCTCGCTAAAGGCTATTCTATCGCCCCCTCTCCGGGGGCGATTTCAGATCAGGCTTCTGTGCCTGGTTGATTCATGGCATTTTCTCGTGCCGCCAGCACACGTTCTACCGTATc                                                            <  4:18646/149‑1 (MQ=255)                                                                                         ttCTCACGCGGTGTTGAAAACGGCCTTCGAGTGGCTCGCTAAAGGCTATTCTATCGCCCCCTCTCCGGGGGCGATTTCAGATCAGGCTTCTGTGCCTGGTTGATTCATGGCATTTTCTCGTGCCGCCAGCACACGTTCTACCGTATCTa                                                          <  2:31031/149‑1 (MQ=255)                                                                                            tcACGCGGTGTTGAAAACGGCCTTCGAGTGGCTCGCTAAAGGCTATTCTATCGCCCCCTCTCCGGGGGCGATTTc                                                                                                                                 <  7:41914/75‑1 (MQ=255)                                                                                            tcACGCGGTGTTGAAAACGGCCTTCGAGTGGCTCGCTAAAGGCTATTCTATCGCCCCCTCTCCGGGGGCGATTTc                                                                                                                                 >  8:41914/1‑75 (MQ=255)                                                                                                  ggTGTTGAAAACGGCCTTCGAGTGGCTCGCTAAAGGCTATTCTATCGCCCCCTCTCCGGGGGCGATTTCAGATCAGGCTTCTGTGCCTGGTTGATTCATGGCATTTTCTCGTGCCGCCAGCACACGTTCTACCGTATCTACCACTGCCt                                                 <  8:234715/149‑1 (MQ=255)                                                                                                    tgtTGAAAACGGCCTTCGAGTGGCTCGCTAAAGGCTATTCTATCGCCCCCTCTCCGGGGGCGATTTCAGATCAGGCTTCTGTGCCTGGTTGATTCATGGCATTTTCTCGTGCCGCCAGCACACGTTCTACCGTATCTACCACTGc                                                   <  1:241336/145‑1 (MQ=255)                                                                                                    tgtTGAAAACGGCCTTCGAGTGGCTCGCTAAAGGCTATTCTATCGCCCCCTCTCCGGGGGCGATTTCAGATCAGGCTTCTGTGCCTGGTTGATTCATGGCATTTTCTCGTGCCGCCAGCACACGTTCTACCGTATCTACCACTGc                                                   >  2:241336/1‑145 (MQ=255)                                                                                                        gAAAACGGCCTTCGAGTGGCTCGCTAAAGGCTATTCTATCGCCCCCTCTCCGGGGGCGATTTCAGATCAGGCTTCTGTGCCTGGTTGATTCATGGCATTTTCTCGTGCCGCCAGCACACGTTCTACCGTATCTACCACTGCCTGAGttt                                           >  7:95669/1‑149 (MQ=255)                                                                                                          aaaCGGCCTTCGAGTGGCTCGCTAAAGGCTATTCTATCGCCCCCTCTCCGGGGGCGATTTCAGATCAGGCTTCTGTGCCTGGTTGATTCATGGCATTTTCTCGTGCCGCCAGCACACGTTCTACCGTATCTACCACTGCCTGAGTTtgt                                         <  7:84644/149‑1 (MQ=255)                                                                                                                     gAGTGGCTCGCTAAAGGCTATTCTATCGCCCCCTCTCCGGGGGCGATTTCAGATCAGGCTTCTGTGCCTGGTTGATTCATGGCATTTTCTCGTGCCGCCAGCACACGTTCTACCGTATCTACCACTGCCTGAGTTTGTGGATCGAttt                               <  8:95669/148‑1 (MQ=255)                                                                                                                      aGTGGCTCGCTACAGGCTATTCTATCGGCCCCTCTCCGGGGGCGATTTCAGATCAGGCTTCTGGGCCTGGTTGATTCATGGCATTTTCTCGTGCCGCCAGCACACGTTCTACCGTATCTACCACTGCCTGAGTTTGGGGATCGATTTCa                             <  1:326221/149‑1 (MQ=255)                                                                                                                           cTCGCTAAAGGCTATTCTATCGCCCCCTCTCCGGGGGCGATTTCAGATCAGGCTTCTGTGCCTGGTTGATTCATGGCATTTTCTCGTGCCGCCAGCACACGTTCTACCGTATCTACCACTGCCTGAGTTTGTGGATCGATTTCAATGtt                        <  2:244139/149‑1 (MQ=255)                                                                                                                                tAAAGGCTATTCTATCGCCCCCTCTCCGGGGGCGATTTCAGATCAGGCTTCTGTGCCTGGTTGATTCATGGCATTTTCTCGTGCCGCCAGCACACGTTCTACCGTATCTACCACTGCCTGAGGTTGTGGATCGATTTCAATGTTGAcgc                   >  5:258125/1‑149 (MQ=255)                                                                                                                                tAAAGGCTATTCTATCGCCCCCACTACGGGGGCGATTTCAGATCAGGCTTCTGTGACTAGTTGATTCATGGCATTTTCTCGTGCGGACGGCACACGTTCTAGCGTATCTACCACTGCCTGAGTTTGTGGATCGATTTCAATGTTGAcgc                   >  2:257254/1‑149 (MQ=255)                                                                                                                                    ggCTATTCTATCGCCCCCTCTCCGGGGGCGATTTCAGATCAGGCTTCTGTGCCTGGTTGATTCATGGCATTTTCTCGTGCCGCCAGCACACGTTCTACCGTATCTACCACTGCCTGAGTTTGTGGATCGATTTCAATGTTGACGCGTgc               >  1:62638/1‑149 (MQ=255)                                                                                                                                     gCTATTCTATCGCCCCCtctccgggggcgatagaatagcctttagcgagccactcgaaggccgttttcaacaccgcgtgagaacacgacctgcca                                                                    >  2:364761‑M1/1‑17 (MQ=255)                                                                                                                                     gCTATTCTATCGCCCCCtctccgggggcgatagaatagcctttagcgagccactcgaaggccgttttcaacaccgcgtgagaacacgacctgcca                                                                    <  1:364761‑M1/95‑79 (MQ=255)                                                                                                                                       tATTCTATCGCCCCCTCTCCGGGGGCGATTTCAGATCAGTCTTCTGTGCCTGGTTGATTCATGGCATTTTCTCGTGCCGCCAGCACCCGATCTACCGTATCTACCACTGCCTGAGTTTGTGGATCGATTTCAATGTTGACGCGTgcgc             >  6:338186/1‑148 (MQ=255)                                                                                                                                        aTTCTATCGCCCCCTCTCCgggggcgatagaatagcctttagcgagccactcgaaggccgttttcaacaccgcgtgagaacacgacctgccagagctgaatatcacgggcgcggaaagcacctgcacaggcattcaga                      >  3:326410‑M2/1‑19 (MQ=255)                                                                                                                                        aTTCTATCGCCCCCTCTCCgggggcgatagaatagcctttagcgagccactcgaaggccgttttcaacaccgcgtgagaacacgacctgccagagctgaatatcacgggcgcggaaagcacctgcacaggcattcaga                      <  4:326410‑M2/138‑120 (MQ=255)                                                                                                                                                gCCCCCggagagggggcgatagaatagcctttagcgagccactcgaaggccgttttcaacaccgcgtgagaacacgtcctgccagagctgaatatcacgggcgcggaaagcacctgcacaggcattcagataataggtaaacattcgt    <  1:44554‑M1/148‑143 (MQ=255)                                                                                                                                                gCCCCCggagagggggcgatagaatagcctttagcgagccactcgaaggccgttttcaacaccgcgtgagaacacgacctgccagagctgaatatcacgggcgcggaaagcacctgcacaggcattcagataataggtaaacattcgtt   >  5:132400‑M1/1‑6 (MQ=255)                                                                                                                                                gCCCCCggagagggggcgatagaatagcctttagcgagccactcgaaggccgttttcaacaccgcgtgagaacacgacctgccagagctgaatatcacgggcgcggaaagcacctgcacaggcattcagataataggtaaacattcgt    <  8:178043‑M1/148‑143 (MQ=255)                                                                                                                                                gCCCCATCTCCGGGGGCGATTTCAGATCAGGCTTCTGTGCCTGGTTGATTCATGGCATTTTCTCGTGCCGCAAGCACACGTTCTACCGTATCTACCACTGCCTGTGTGTGTGGAGCGATTTCAATGTTGACGCGTGCGCCAAGtttttt   <  7:352695/149‑1 (MQ=255)                                                                                                                                                 cccccggagagggggcgatagaatagcctttagcgagccactcgaaggccgttttcaacaccgcgtgagaacacgacctgccagagctgaatatcacgggcgcggaaagcacctgcacaggcattcagataataggtaaacattcgtt   >  3:221163‑M1/1‑5 (MQ=255)                                                                                                                                                 cccccTCTCCGGGGGCGATTTCAGATCAGGCTTCTGTGCCTGGTTGATTCATGGCATTTTCTCGTGCCGCCAGCACACGTTCTACCGTATCTACCCCTGCCTGAGTTTGTGGATCGATTTCAATGTTGACGCGTGCGCCAAGTTTTttc  >  7:175615/1‑149 (MQ=255)                                                                                                                                                 cccccTCTCCGGGGGCGATTTCAGATCAGGCTTCTGTGCCTGGTTGATTCATGGCATTTTCTCGTGCCGCCAGCACACGTTCTACCGTATCTACCACTGCCTGAGTTTGTGGATCGATTTCAATGTTGACGCGTGCGCCAAGTTTTttc  >  2:124459/1‑149 (MQ=255)                                                                                                                                                 cccccTCTCCGGGGGCGATTTCAGATCAGGCTTCTGTGCCTGGTTGATTCATGGCATTTTCTCGTGCCGCCAGCACACGTTCTACCGTATCTACCACTGCCTGAGTTTGTGGATCGATTTCAATGTTGACGCGTGCGCCAAGTTTTttc  >  1:10775/1‑149 (MQ=255)                                                                                                                                                 cccccTCTCCGGGGGCGATTTCAGATCAGGCTTCTGAGCCTGGTTGATTCATGGCATTTTCTCGTGCCGCCAGCACACGTTCTACCGTATCTACCACTGCCTGAGTTTGTGGATCGATTTCAATGTTGACGCGTGCGCCAAGTTTTttc  >  8:287366/1‑149 (MQ=255)                                                                                                                                                     |                                                                                                                                                 TGAACGCTTTAAACGAATGTTTACCTATTATCTGAATGCCTGTGCAGGTGCTTTCCGCGCCCGTGATATTCAGCTCTGGCAGGTCGTGTTCTCACGCGGTGTTGAAAACGGCCTTCGAGTGGCTCGCTAAAGGCTATTCTATCGCCCCCTCTCCGGGGGCGATTTCAGATCAGGCTTCTGTGCCTGGTTGATTCATGGCATTTTCTCGTGCCGCCAGCACACGTTCTACCGTATCTACCACTGCCTGAGTTTGTGGATCGATTTCAATGTTGACGCGTGCGCCAAGTTTTTTC  >  NC_000913/1742432‑1742724

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.