Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 1,293,015 IS1 (+) +8 bp intergenic (‑93/‑505) hns ← / → tdk global DNA‑binding transcriptional dual regulator H‑NS/thymidine kinase/deoxyuridine kinase

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 257908 =NA (NA)126 (0.950) 91/260 0.3 100% noncoding (768/768 nt) IS1 repeat region
?NC_000913 1293015 = 0 (0.000)intergenic (‑93/‑512) hns/tdk global DNA‑binding transcriptional dual regulator H‑NS/thymidine kinase/deoxyuridine kinase
* ? NC_000913 = 258675NA (NA)135 (1.020) 92/260 0.2 100% noncoding (1/768 nt) IS1 repeat region
?NC_000913 = 1293022 0 (0.000)intergenic (‑100/‑505) hns/tdk global DNA‑binding transcriptional dual regulator H‑NS/thymidine kinase/deoxyuridine kinase

Only 100 of 135 total aligned reads displayed.

AGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/258529‑258675
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CAATTTTGAATTCCTTACATTCCTGGCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTGAGATTACTACAATGAGCGAAGCACTTAAAATTCTGAACAACATCCGTACTCTTCGTGCG  <  NC_000913/1293022‑1292875
                                                                                                                                                                                                                                                                                                       
AGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCC                                                                                                                                                     >  7:167866/1‑148
            TGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAATTTTGAATTCC                                                                                                                                        <  7:505340/149‑1
             GTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAATTTTGAATTCCT                                                                                                                                       >  4:75958/1‑149
             GTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAATTTTGAATTCCT                                                                                                                                       >  1:614196/1‑149
                      TGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAATTTTGAATTCCTTACATTCCT                                                                                                                              <  2:296701/149‑1
                           TTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAATTTTGAATTCCTTACATTCCTGGC                                                                                                                           <  3:390182/147‑1
                                     GCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAATTTTGAATTCCTTACATTCCTGGCTATTGCACAACT                                                                                                               >  8:312801/1‑149
                                       ACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAATTTTGAATTCCTTACATTCCTGGCTATTGCACAAC                                                                                                                >  5:365153/1‑146
                                       ACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAATTTTGAATTCCTT                                                                                                                                      >  2:91735/1‑124
                                       ACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAATTTTGAATTCCT                                                                                                                                       >  1:286072/1‑123
                                            CCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAATTTTGAATTCCTTACATTCCTGGCTATTGCACAACTGAATTTA                                                                                                        <  1:172813/149‑1
                                             CCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAATTTTGAATTCCTTACATTCCTGGCTATTGCACAACTGAATTTAA                                                                                                       <  4:565782/149‑1
                                             CCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAATTTTGAATTCCTTACATTCCTGGCTATTGCACAACTGAATTT                                                                                                         >  3:565782/1‑147
                                               GTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAATTTTGAATTCCTTACATTCCTGGCTATTGCACAACTGAATTTAAGG                                                                                                     <  8:167866/149‑1
                                               GTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAATTTTGAATTCCTTACATTCCTGGCTATTGCACAACTGAATTTAAGG                                                                                                     <  7:312801/149‑1
                                               GTCAGTAGCTGAAAAGTAGTGACAGCTGATAGAAACAGAAGCCACTTGAGCAACTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAATTTTGAATTCCTTACATTCCTGGCTATTGCACAACTGAATTTAAGG                                                                                                     <  1:345352/149‑1
                                                    TAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAATTTTGAATTCCTTACATTCCTG                                                                                                                             <  1:595076/120‑1
                                                       CTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAATTTTGAATTCCTTACATTCCTGGCTATTGCACAACTGAATTTAAG                                                                                                      >  8:144410/1‑140
                                                       CTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAATTTTGAATTCCTTACATTCCTGGCTATTGCACAACTGAATTTAAG                                                                                                      <  7:144410/140‑1
                                                        TGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAATTTTGAATTCCTTACATTCCTGGCTATTGCACAACTGAATTTAAGGCTCTA                                                                                                >  6:474364/1‑145
                                                        TGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAATTTTGAATTCCTTACATTCCTGGCTATTGCACAACTGAATTTAAGGCTCTA                                                                                                <  5:474364/145‑1
                                                         GAACAGGAGGGACAGCTGATAGAAACAGACGCCCCTGGAGCACCTCAACACCACCAGCATACCCTAAAGCAGTAAGTTGGCAGCATCACCCAATTTTGAATTCCGTACCTTCCTGGCTATTGCACACCTGAATTTAAGGCTCGATTAT                                                                                            >  4:212278/1‑148
                                                         GAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAATTTTGAATTCCTTACATTCCTGGCTATTGCACAACTGAATTTAAGGCTCTATTAT                                                                                            >  8:415073/1‑148
                                                          AACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAATTTTGAATTCTTTACATTCCTGGCTATTGCACAACTGAATTT                                                                                                         <  6:601800/134‑1
                                                          AACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAATTTTGAATTCGTTACATTCCTGGCTATTGCACAACTGAATTT                                                                                                         >  5:601800/1‑134
                                                          AACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAATTTTGAATTCCTTACATTCCTGGCTATTGCACAACTGAATTTAAGGCTCTATTATTA                                                                                          <  8:291553/149‑1
                                                          AACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAATTTTGAATTCATTACATTCCTGGCTATTGCACAACTGAATTTAAGGCTCTATTATT                                                                                           >  2:575504/1‑148
                                                           ACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAATTTTGAATTCCTTA                                                                                                                                     >  2:510970/1‑105
                                                           ACAGGAGGGACAGCTGATAGAAACAGAAGCAACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAATTTTGAATTCCTTA                                                                                                                                     <  1:510970/105‑1
                                                                 GGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAATTTTGAATTCCTTACATTCCTGGCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAA                                                                                    >  1:628108/1‑148
                                                                     CAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAATTTTGAATTCCTTACATTCCTGGCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAAC                                                                               <  7:415073/149‑1
                                                                       GCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAATTTTGAATTCCTTACATTCCTGGCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCA                                                                             <  7:436473/149‑1
                                                                         TGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAATTTTGAATTCCT                                                                                                                                       >  6:461333/1‑89
                                                                         TGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAATTTTGAATTCCT                                                                                                                                       <  5:461333/89‑1
                                                                          GATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAATTTTGAATTCCTTACATTCCTGGCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCC                                                                          >  6:360872/1‑149
                                                                          GATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAATTTTGAATTCCTTACATTCCTGGCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCC                                                                          >  4:74632/1‑149
                                                                          GATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAATTTTGAATTCCTTACATTCCTGGCTATTGC                                                                                                                     <  7:7692/106‑1
                                                                            TAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAATTTTGAATTCCTTACATTCCTGGCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCC                                                                         <  5:360872/148‑1
                                                                               AAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAATTTTGAATTCCTTACATTCCTGGCTATTGCACAACTGAATTTAAGGCTCTATTAT                                                                                            <  7:215145/126‑1
                                                                               AAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAATTTTGAATTCCTTACATTCCTGGCTATTGCACAACTGAAT                                                                                                           >  4:504577/1‑111
                                                                               AAACAGAAGCCACTGGAGCACCTCAAAAACACCATAATACACTAAATCAGTAAGTTGGCAGCATCACCCAATTTTGAATTCCTTAAATTCCTGGCTATTGAACAAATTAATTTAAGGCTCTATTAT                                                                                            >  8:215145/1‑126
                                                                                 ACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAATTTTGAATTCCTTACATTCCTGGCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATAT                                                                    >  6:494683/1‑148
                                                                                     AAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAATTTTGAATTCCTTACATTCCTGGCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTT                                                               <  2:628108/149‑1
                                                                                     AAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAATTTTGAATTCCTTACATTCCTGGCTATTGCACAACTGAATT                                                                                                          <  5:290066/106‑1
                                                                                     AAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAATTTTGAATTCCTTACATTCCTGGCTATTGCACAACTGAATT                                                                                                          >  6:290066/1‑106
                                                                                       GCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAATTTTGAATTCCTTACATTCCTGGCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTT                                                              >  6:247928/1‑148
                                                                                       GCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAATTTTGAATTCCTTACATTCCTGGCTATTGCACAACT                                                                                                               <  1:156567/99‑1
                                                                                       GCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAATTTTGAATTCCTTACATTCCTGGCTATTGCACAACT                                                                                                               >  2:156567/1‑99
                                                                                         CACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAATTTTGAATTCCTTACATTCCTGGCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTT                                                              >  8:569286/1‑146
                                                                                          ACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTAGGCAGCATCACCCAATTTTGAATTCCTTACATTGCTGGCAATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTT                                                              >  8:461671/1‑145
                                                                                              GAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAATTTTGAATTCCTTACATTCCTGGCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTGAGATT                                                        <  3:187430/147‑1
                                                                                              GAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAATTTTGAATTCCTTACATTCCTGGCTATTGCACAACTGAATTTAAGGCTATATTATTACCACACCAAACCACCCCAAATTAAGTTTGATATTA                                                       >  6:95223/1‑148
                                                                                                   CCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAATTTTGAATTCCTTACATTCCTGGCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTG                                                             >  2:378378/1‑137
                                                                                                    CTCCAAAACACCATCATACACTACATCAGTAAGTTGGCAGCATCACCCAATTTTGAATTCCTTACATTCCTGGCTCTTGCACAACTGAAGTTAAGGCGCTATTATTACCTCAACCAACCCCCCCAAGATAAGTTTGAGATTACTACAAT                                                <  3:212278/149‑1
                                                                                                    CTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAATTTTGAATTCCTTACATTCCTGGCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTGAGATTACTACAAT                                                >  2:12799/1‑149
                                                                                                     TCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAATTTTGAATTCCTTACATTCCTGGCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCAC                                                                            >  5:222137/1‑120
                                                                                                     TCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAATTTTGAATTCCTTACATTCCTGGCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCAC                                                                            <  6:222137/120‑1
                                                                                                      CAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAATTTTGAATTCCTTACATTCCTGGCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTGAGATTACTACAAT                                                >  7:128382/1‑147
                                                                                                       AAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAATTTTGAATTCCTTACATTCCTGGCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTGAGATT                                                        >  8:4123/1‑138
                                                                                                       AAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAATTTTGAATTCCTTACATTCCTGGCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTGAGATT                                                        <  7:4123/138‑1
                                                                                                       AAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAATTTTGAATTCCTTACATTCCTGGCTATTGCACAACTGAATTTAAGGCTCTA                                                                                                >  4:383799/1‑98
                                                                                                       AAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAATTTTGAATTCCTTACATTCCTGGCTATTGCACAACTGAATTTAAGGCTCTA                                                                                                <  3:383799/98‑1
                                                                                                        AAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAATTTTGAATTCCTTACATTCCTGGCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTGAGATTACTACAATGAGC                                            <  1:12799/149‑1
                                                                                                        AAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAATTTTGAATTCCTTACATTCCTGGCTA                                                                                                                         >  6:531634/1‑72
                                                                                                           ACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAATTTTGAATTCCTTACATTCCTGGCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTGAGATTACTACAATGAGCG                                           >  3:238324/1‑147
                                                                                                            CACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAATTTTGAATTCCTTACATTCCTGGCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTGAGATTACTACAATGAGCGAAG                                        <  5:494683/149‑1
                                                                                                               CATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAATTTTGAATTCCTTACATTCCTGGCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTGAGATTACTACAATGAGCGAA                                         >  3:487152/1‑145
                                                                                                               CATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAATTTTGAATTCCTTACATTCCTGGCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTGAGATTACTACAATGAGCGAA                                         <  4:487152/145‑1
                                                                                                                  CATACACTAAATCAGTAAGTTGGCAGCATCACCCAATTTTGAATTCCTTACATTCCTGGCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTGAGATTACTACAATGAGCGAA                                         >  4:166384/1‑142
                                                                                                                  CATACACTAAATCAGTAAGTTGGCAGCATCACCCAATTTTGAATTCCTTACATTCCTGGCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTGAGATTACTACAATGAGCGAA                                         <  3:166384/142‑1
                                                                                                                    TACACTAAATCAGTAAGTTGGCAGCATCACCCAATTTTGAATTCCTTACATTCCTGGCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTGAGATTACTACAATGAGCGAAGCACTTAAA                                <  7:586129/149‑1
                                                                                                                      CACTAAATCAGTAAGTTGGCAGCATCACCCAATTTTGAATTCCTTACATTCCTGGCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTGAGATTACTACAATGAGCGAAGCACTTAAAA                               <  6:40220/148‑1
                                                                                                                       ACTAAATCAGTAAGTTGGCAGCATCACCCAATTTTGAGTTCCTTACATTCCTGGCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTGAGATTACTACAATGAG                                             >  3:525496/1‑133
                                                                                                                       ACTAAATCAGTAAGTTGGCAGCATCACCCAATTTTGAATTCCTTACATTCCTGGCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAATAAACCACCCCAATATAAGTTTG                                                             <  1:309546/117‑1
                                                                                                                       ACTAAATCAGTAAGTTGGCAGCATCACCCAATTTTGAATTCCTTACATTCCTGGCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAATAAACCACCCCAATATAAGTTTG                                                             >  2:309546/1‑117
                                                                                                                       ACTAAATCAGTAAGTTGGCAGCATCACCCAATTTTGAATTCCTTACATTCCTGGCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTGAGATTACTACAATGAGCGAAGCACTTAAAATT                             >  1:423434/1‑149
                                                                                                                       ACTAAATCAGTAAGTTGGCAGCATCACCCAATTTTGAATTCCTTACATTCCTGGCTATTGCACAACTGAATTTAAGGCTCTATTAT                                                                                            >  6:336479/1‑86
                                                                                                                       ACTAAATCAGTAAGTTGGCAGCATCACCCAATTTTGAATTCCTTACATTCCTGGCTATTGCACAACTGAATTTAAGGCTCTATTAT                                                                                            <  5:336479/86‑1
                                                                                                                        CTAAATCAGTAAGTTGGCAGCATCACCCAATTTTGAATTCCTTACATTCCTGGCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTGAGATTACTACAATGAGCGAAGCACTTAAAATTC                            <  2:423434/149‑1
                                                                                                                        CTAAATCAGTAAGTTGGCAGCATCACCCAATTTTGAATTCCTTACATTCCTGGCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTGAGATTAC                                                      <  1:950/123‑1
                                                                                                                         TAAATCAGTAAGTTGGCAGCATCACCCAATTTTGAATTCCTTACATTCCTGGCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTGAGATTACTACAATGAGCGAAGCACTTAAAATTCT                           >  2:571365/1‑149
                                                                                                                           AATCAGTAAGTTGGCAGCATCACCCAATTTTGAATTCCTTACATTCCTGGCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTGAGATTACTACAATGAGCGAAGCACTTAAAATTCTG                          >  7:319539/1‑148
                                                                                                                           AATCAGTAAGTTGGCAGCATCACCCAATTTTGAATTCCTTACATTCCTGGCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTGAGATTACTACAATGAGCGAAGCACTTAAAATTCTG                          >  6:373008/1‑148
                                                                                                                            ATCAGTAAGTTGGCAGCATCACCCAATTTTGAATTCCTTACATTCCTGGCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTGAGATTACTACAATGAGCGAAGCACTTAAAATTCTGAA                        <  8:319539/149‑1
                                                                                                                            ATCAGTAAGTTGGCAGCATCACCCAATTTTGAATTCCTTACATTCCTGGCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTGAGATTACTACAATGAGCGAAGCACTTAAAATTCTGAA                        <  7:569286/149‑1
                                                                                                                            ATCAGTAAGTTGGCAGCATCACCCAATTTTGAATTCCTTACATTCCTGGCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTGAGATTACTACAATGAGCGAAGCACTTAAAATTCTGAA                        <  8:128382/149‑1
                                                                                                                                GTAAGTTGGCAGCATCACCCAATTTTGAATTCCTTACATTCCTGGCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTT                                                              >  3:170185/1‑107
                                                                                                                                GTAAGTTGGCAGCATCACCCAATTTTGAATTCCTTACATTCCTGGCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTT                                                              <  4:170185/107‑1
                                                                                                                                 TAAGTTGGCAGCATCACCCAATTTTGAATTCCTTACATTCCTGGCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTC                                                                                      <  2:494618/82‑1
                                                                                                                                 TAAGTTGGCAGCATCACCCAATTTTGAATTCCTTACATTCCTGGCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTC                                                                                      >  1:494618/1‑82
                                                                                                                                        GCAGCATCACCCAATTTTGAATTCCTTACATTCCTGGCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTGAGATTACTACAATGAG                                             >  8:577069/1‑116
                                                                                                                                        GCAGCATCACCCAATTTTGAATTCCTTACATTCCTGGCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGT                                                                >  4:201976/1‑97
                                                                                                                                        GCAGCATCACCCAATTTTGAATTCCTTACATTCCTGGCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGT                                                                <  3:201976/97‑1
                                                                                                                                        GCAGCATCACCCAATTTTGAATTCCTTACATTCCTGGCTATTGCACAACTGAATTTA                                                                                                        <  5:314394/57‑1
                                                                                                                                            CATCACCCAATTTTGAATTCCTTACATTCCTGGCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTGAGATTACTACAATGAGCGAAGCACTTAAAATTCTGAACAACATCCGTACTCTT        >  7:527853/1‑149
                                                                                                                                             ATCACCCAATTTTGAATTCCTTACATTCCTGGCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTGAGATTACTACAATGAGCGAAGCACTTAAAATTCTGAACAACATCCGTACTCTTC       <  2:614196/149‑1
                                                                                                                                                ACCCAATTTTGAATTCCTTACATTCCTGGCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTGAGATTACTACAATGAGCGAAGCACTTAAAATTCTGAACAACATCCGTACTCTTCGTG    >  3:522763/1‑149
                                                                                                                                                ACCCAATTTTGAATTCCTTACATTCCTGGCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACACCAATATAAGTTTGAGATTACTACAATGAGCGAAGCACTTAAAATTCTGAACAACATCCGTACTCTTCGT     <  6:336407/148‑1
                                                                                                                                                 CCCAATTTTGAATTCCTTACATTCCTGGCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTGAGATTACTACAATGAGCGAAGCACTTAAAATTCTG                          >  6:104158/1‑126
                                                                                                                                                 CCCAATTTTGAATTCCTTACATTCCTGGCTATTCCAAAACAGAATTTAACGCTCTAATATTACATCAACAAAAAACCCCAATATAAGATTGACATTACTAAAATGAGCGAAGCACATAAAATTCTGAACAACATCCGAACTCTTCGT     >  4:294639/1‑147
                                                                                                                                                                                                                                                                                                       
AGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/258529‑258675
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CAATTTTGAATTCCTTACATTCCTGGCTATTGCACAACTGAATTTAAGGCTCTATTATTACCTCAACAAACCACCCCAATATAAGTTTGAGATTACTACAATGAGCGAAGCACTTAAAATTCTGAACAACATCCGTACTCTTCGTGCG  <  NC_000913/1293022‑1292875

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.