Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 3,922,629 IS5 (–) +4 bp intergenic (‑189/+425) atpI ← / ← rsmG ATP synthase, membrane‑bound accessory factor/16S rRNA m(7)G527 methyltransferase, SAM‑dependent; glucose‑inhibited cell‑division protein

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3652036 =NA (NA)113 (0.860) 87/260 0.3 95.6% noncoding (1195/1195 nt) IS5 repeat region
?NC_000913 = 3922632 5 (0.040)intergenic (‑192/+425) atpI/rsmG ATP synthase, membrane‑bound accessory factor/16S rRNA m(7)G527 methyltransferase, SAM‑dependent; glucose‑inhibited cell‑division protein
* ? NC_000913 = 3653230NA (NA)184 (1.390) 127/260 0.0 97.3% noncoding (1/1195 nt) IS5 repeat region
?NC_000913 3922629 = 5 (0.040)intergenic (‑189/+428) atpI/rsmG ATP synthase, membrane‑bound accessory factor/16S rRNA m(7)G527 methyltransferase, SAM‑dependent; glucose‑inhibited cell‑division protein

Only 100 of 311 total aligned reads displayed.

TCGTATAAAACTTTCTTTAAGGCTTAGAGTCAAGCATCAAAAAGCGGTCAAATTATACGGTGCGCCCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACTTGGCAAATGATGCCTTTGCAAGTTTATGATATTTCAGTCT  >  NC_000913/3922481‑3922776
                                                                                                                                                    |                                                                                                                                                   
gcggacaagaaaatctcttttctggtctgacggcgcttcctgctgaattcactgtcggctaatgtaagttgatgactcatgatgaaccctgttctatggctccagctgacaaacatgatctcatatcagggacttgttcgcaccttccc                                                                                                                                                     <  6:563648‑M2/1‑1 (MQ=255)
  gTATAAACCTTTATGTAAGTCGTAGCTTCAAGAATCAAAAAGCGGTCAAATTATACGGGGCGCACCCGTGAGTTCACACAATCAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTTCATACAATTTCGACTTTtcttct                                                                                                                                                    <  5:137762/148‑1 (MQ=255)
  gTATAAAACTTTCTTTAAGGCTTAGAGTCAAGCATCAAAAAGCGGTCAAATTATACGGTGCGCCCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCt                                                                                                                                                    >  7:336393/1‑148 (MQ=255)
   tataAAACTTTCTTTAAGGCTTAGAGTCAAGCATCAAAAAGCGGTCAAATTATACGGTGCGCCCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTaa                                                                                                                                                  <  6:405079/149‑1 (MQ=255)
    actaaacttTCTTTAAGGCTTAGAGTCAAGCATCAAAAAGCGGTCAAATTATACGGTGCGCCCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAAg                                                                                                                                                 >  5:77963‑M2/4‑148 (MQ=255)
      atgaacatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAcc                                                                                                                                                <  1:159048‑M2/6‑1 (MQ=255)
      aagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcctgatgaaccctgttctatggctccagatgacaaacatgatcacatatcagggacttgttcgcaccttccctaaaa                                                                                                                                                >  2:159048‑M2/143‑146 (MQ=255)
      aagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccc                                                                                                                                                     >  1:256465‑M2/143‑143 (MQ=255)
       agaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAACCCt                                                                                                                                              >  3:568700‑M2/142‑149 (MQ=255)
        gaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAACCCTg                                                                                                                                             >  8:331660‑M2/141‑149 (MQ=255)
           tttctttAAGGCTTAGAGTCAAGCATCAAAAAGCGGTCAAATTATACGGTGCGCCCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAAggaaggtg                                                                                                                                          <  2:110847‑M2/149‑9 (MQ=255)
              ctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAACCCTGTTCGAt                                                                                                                                       >  1:394616‑M2/135‑149 (MQ=255)
                 tAAGGCTTAGAGTCAAGCATCAAAAAGCGGTCAAATTATACGGTGCGCCCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAAggaaggtgcgaa                                                                                                                                      >  1:110847‑M2/1‑135 (MQ=255)
                  aaGGCTTAGAGTCAAGCATCAAAAAGCGGTCAAATTATACGGTGCGCCCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAACCCTGTTCGATCAt                                                                                                                                    >  5:271888/1‑148 (MQ=255)
                   ttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAACCCTGTTCGATCAt                                                                                                                                    <  1:552472‑M2/18‑1 (MQ=255)
                   aGGCTTAGAGTCAAGCATCAAAAAGCGGTCAAATTATACGGTGCGCCCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAAggaaggtgcgaataa                                                                                                                                   >  3:285711‑M2/1‑133 (MQ=255)
                          gagTCAAGAATCAAAAAGCGGACAAATTATACGGTGCGCCCCCGTGATTTCAAACAATAAGTAGCCAAAAGCTGAATAAATGTTTAAATAATTTTCCAGTGCATACAATTGAGACATTTATGCTAAggaaggtgccaataagcgggga                                                                                                                            <  6:471430‑M2/148‑23 (MQ=255)
                              cggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTaaa                                                                                                                       <  7:293441‑M2/31‑1 (MQ=255)
                               aaGCATCAAAAAGCGGTCAAATTATACGGTGCGCCCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAAggaaggtgcgaataagctgggaaattc                                                                                                                       >  3:308772‑M2/1‑121 (MQ=255)
                                  gcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATaa                                                                                                                    <  1:57145‑M2/34‑1 (MQ=255)
                                   aTCAAAAAGCGGTCAAATTATACGGTGCGCCCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAAggaaggtgcgaataagcggggaaattcttctc                                                                                                                  >  5:432148‑M2/1‑117 (MQ=255)
                                      actgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAAcgc                                                                                                                 <  4:462574‑M2/37‑1 (MQ=255)
                                      aaaaaGCGGTCAAATTATACGGTGCGCCCCCGTGATTTCAAACATTAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAAggaaggtgcgaataagcggggaaattcttctcggc                                                                                                               <  6:318159‑M2/149‑36 (MQ=255)
                                          aGCGGTCAAATTATACGGATCGCCCCCGTGATTTCTAACAATAAGTAGCCAATAGGTCAATAAATGTATAAATATTTTTCCAGTGTATACAATTGCGACTTTTCTGGTAAggaaggtgcgaataagcggggaaattcttctcggctgac                                                                                                           >  5:471430‑M2/1‑110 (MQ=255)
                                            gaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAacac                                                                                                         >  5:576255‑M2/105‑149 (MQ=255)
                                             ggTCAAATTATACGGTGCGCCCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAAggaaggtgcgaataagcggggaaattcttctcggctgact                                                                                                          <  1:393764‑M2/147‑41 (MQ=255)
                                             aattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAACACTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACt                                                                                                        >  3:115079‑M2/104‑149 (MQ=255)
                                                tcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAAc                                                                                                                   >  2:449461‑M2/101‑135 (MQ=255)
                                                 cactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACtggg                                                                                                     >  6:196878‑M2/100‑147 (MQ=255)
                                                  actgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTg                                                                                                       <  2:85296‑M2/47‑1 (MQ=255)
                                                    ttATACGGTGCGCCCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcattt                                                                                                 >  8:584216‑M2/1‑100 (MQ=255)
                                                    tgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCtaat                                                                                                                                                 <  6:102236‑M2/5‑2 (MQ=255)
                                                    tgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAACCCt                                                                                                                                              >  5:547964‑M2/97‑104 (MQ=255)
                                                     tataCGGTGCGCCCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAAggaaggtgcgaataagcggggaaat                                                                                                                         >  7:485091‑M2/1‑99 (MQ=255)
                                                      tcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATaaa                                                                                               <  7:131504‑M2/55‑1 (MQ=255)
                                                              ggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTa                                                                                                                         <  1:492059‑M2/29‑1 (MQ=255)
                                                              ggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTAAAt                                                                                                                      <  2:296766‑M2/32‑1 (MQ=255)
                                                              cgcCCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttc                                                                                        >  2:393764‑M2/1‑90 (MQ=255)
                                                                  agttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAaca                                                                                                          >  8:385264‑M2/83‑126 (MQ=255)
                                                                  agttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAaca                                                                                                          <  7:385264‑M2/44‑1 (MQ=255)
                                                                   ccGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgttt                                                                                  <  3:99029‑M2/149‑65 (MQ=255)
                                                                   ccGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttca                                                                                               >  7:84354‑M2/1‑85 (MQ=255)
                                                                          ttCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccga                                                                           <  3:336632‑M2/149‑72 (MQ=255)
                                                                           ctcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCGGATCACATAtt                                                                          >  3:443898‑M2/74‑149 (MQ=255)
                                                                            tcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTg                                                                         >  2:601744‑M2/73‑149 (MQ=255)
                                                                             aaaCAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattt                                                                        <  3:472727‑M2/149‑75 (MQ=255)
                                                                                  tgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCAAATATTGCGCATg                                                                   >  6:95964‑M2/67‑149 (MQ=255)
                                                                                   tAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctc                                                                  <  5:499616‑M2/149‑81 (MQ=255)
                                                                                   tAAGGAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAAggaaggtgcgaataagcggggaaattcttctcggc                                                                                                               <  1:419992‑M2/104‑36 (MQ=255)
                                                                                      ccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGt                                                                  >  8:168966‑M2/63‑146 (MQ=255)
                                                                                        ctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTcgcg                                                             >  5:228308‑M2/61‑149 (MQ=255)
                                                                                        ctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTcgc                                                              >  3:400582‑M2/61‑148 (MQ=255)
                                                                                         tgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATcaca                                                                              <  2:406091‑M2/72‑1 (MQ=255)
                                                                                           cAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctc                                                                  >  5:288922‑M2/1‑61 (MQ=255)
                                                                                           cAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctc                                                                  <  6:288922‑M2/141‑81 (MQ=255)
                                                                                               atggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCa                                                      >  8:207892‑M2/54‑149 (MQ=255)
                                                                                               aGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgcct                                                      >  4:78137‑M2/1‑57 (MQ=255)
                                                                                                  gctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCatat                                                   <  8:282594‑M2/99‑1 (MQ=255)
                                                                                                   ctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCAtatt                                                  <  4:158932‑M2/100‑1 (MQ=255)
                                                                                                    tccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCAtatt                                                  >  3:70588‑M2/49‑148 (MQ=255)
                                                                                                    aaTAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaat                                                 <  4:34136‑M2/149‑98 (MQ=255)
                                                                                                      tAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaa                                                           >  4:286509‑M2/1‑50 (MQ=255)
                                                                                                        aaTGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcag                                              >  6:499616‑M2/1‑48 (MQ=255)
                                                                                                         atgacaaacatgatctcatatcagggacttgttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTgg                                                                                                      >  2:212392‑M2/44‑91 (MQ=255)
                                                                                                         atgacaaacatgatctcatatcagggacttgttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTgg                                                                                                      <  1:212392‑M2/48‑1 (MQ=255)
                                                                                                         aTGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcc                                            <  6:546118‑M2/149‑103 (MQ=255)
                                                                                                            tttAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctat                                         <  7:147892‑M2/149‑106 (MQ=255)
                                                                                                             caaacatgatctcatatcagggacttgttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACTTg                                        <  6:601474‑M2/110‑1 (MQ=255)
                                                                                                              aaacatgatctcatatcagggacttgttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGc                                                                                             >  3:242345‑M2/39‑95 (MQ=255)
                                                                                                              aaacatgatctcatatcagggacttgttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACTTgg                                       <  3:505906‑M2/111‑1 (MQ=255)
                                                                                                              aaacatgatctcatatcagggacttgttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACTTgg                                       >  5:333973‑M2/39‑149 (MQ=255)
                                                                                                               aaaTATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatt                                        <  8:446369‑M2/147‑107 (MQ=255)
                                                                                                                aaTATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagc                                             >  6:69335‑M2/1‑40 (MQ=255)
                                                                                                                  atgatctcatatcagggacttgttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACTTGGCaaa                                   <  7:158379‑M2/115‑1 (MQ=255)
                                                                                                                   atTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagacc                                  <  3:107876‑M2/149‑113 (MQ=255)
                                                                                                                      tctcatatcagggacttgttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAacac                                                                                                         >  7:130138‑M2/31‑75 (MQ=255)
                                                                                                                       ctcatatcagggacttgttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGcac                                                          <  8:130320‑M2/92‑1 (MQ=255)
                                                                                                                       ctcatatcagggacttgttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACTTGGCAAatgatg                              >  3:497266‑M2/30‑149 (MQ=255)
                                                                                                                            gTGCATACAATTGCGACTTTTCTGCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACTTGGCAAATGATGCCttt                         >  7:592657/1‑149 (MQ=255)
                                                                                                                            atcagggacttgttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCGGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACTTGGCAAATGATGCCttt                         <  4:443898‑M2/125‑1 (MQ=255)
                                                                                                                            atcagggacttgttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACTTgg                                       >  4:246714‑M2/25‑135 (MQ=255)
                                                                                                                             tcagggacttgttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACTTGGCAAATGATGCCttt                         <  5:196878‑M2/125‑1 (MQ=255)
                                                                                                                             tcagggacttgttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACTTGGCAAATGATGCCTTTg                        >  5:185900‑M2/24‑149 (MQ=255)
                                                                                                                               agggacttgttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGa                                                                                   >  4:548442‑M2/22‑88 (MQ=255)
                                                                                                                                 ggacttgttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGt                                                                                                     <  8:255031‑M2/49‑1 (MQ=255)
                                                                                                                                    aaTTGCGACTTTTCTGCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaa                 >  7:459145‑M2/1‑20 (MQ=255)
                                                                                                                                     ttgttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACTTGGCAAATGATGCCTTTGCAAGTTTa                >  6:343663‑M2/16‑149 (MQ=255)
                                                                                                                                     aTTGCGACTTTTCTGCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaag                <  3:19758‑M2/149‑131 (MQ=255)
                                                                                                                                       gttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACTTGGCAAATGATGCCTTTGCAAGTTTAt               <  4:50402‑M2/135‑1 (MQ=255)
                                                                                                                                        ttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCGt                                                                                           >  4:572547‑M2/13‑71 (MQ=255)
                                                                                                                                        ttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCa                                                                                     <  7:184074‑M2/65‑1 (MQ=255)
                                                                                                                                        ttcgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACTTGGCAAATGATGCCTTTGCAAGTTTATg              <  1:77617‑M2/136‑1 (MQ=255)
                                                                                                                                          cgcaccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACTTGGCAAATGATGCCTTTGCAAGTTTATGata           >  7:27024‑M2/11‑149 (MQ=255)
                                                                                                                                             ttttCTGCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttaga                                    >  5:378588‑M2/1‑11 (MQ=255)
                                                                                                                                             ttttCTGCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgttt                                                                                  <  6:270012‑M2/75‑65 (MQ=255)
                                                                                                                                             accttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGcaca                                                         <  5:603712‑M2/93‑1 (MQ=255)
                                                                                                                                              ccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTcgc                                                              <  5:520027‑M2/88‑1 (MQ=255)
                                                                                                                                              ccttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTcgc                                                              >  6:520027‑M2/7‑94 (MQ=255)
                                                                                                                                               cttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACTTGGCAAATGATGCCTTTGCAAGTTTATGATATTTCa      <  2:533088‑M2/144‑1 (MQ=255)
                                                                                                                                               cttccCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACTTGGCAAATGATGCCTTTGCAAGTTTATGATATTTCa      <  8:479655‑M2/144‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                   
TCGTATAAAACTTTCTTTAAGGCTTAGAGTCAAGCATCAAAAAGCGGTCAAATTATACGGTGCGCCCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACTTGGCAAATGATGCCTTTGCAAGTTTATGATATTTCAGTCT  >  NC_000913/3922481‑3922776

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.