New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	1411899 =	60 (0.720)	5 (0.080)	5/208	NT	8.6%	coding (50/936 nt)	ttcA	tRNA s(2)C32 thioltransferase, iron sulfur cluster protein
	?	NC_000913	= 1434958	59 (0.890)					pseudogene (51/51 nt)	ttcC	pseudogene, prophage Rac integration site ttcA duplication;Phage or Prophage Related

AAAAATGGGGCAAAACGCTGCAAAAGGGGCAAAAAAGGGGCAAAAAAAGAGTGGATTATCGTAGCTTATTGTTGTCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCGTCATGCCGGAACGCCCAGCATAAGAAATCTGATATAAAAAACTGTGGCGT  >  NC_000913/1434810‑1435102                                                                                                                                                     |                                                                                                                                                 aaaaaTGGGGCAAAACGCTGCAAAAGGGGCAAAAAAGGGGCAAAAAAAGAGTGGATTATCGTAGCTTATTGTTGTCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTAc                                                                                                                                                  >  7:190435/1‑149 (MQ=255)    aaTGGGGCAAAACGCTGCAAAAGGGGCAAAAAAGGGGCAAAAAAAGAGTGGATTATCGTAGCTTATTGTTGTCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACttg                                                                                                                                               <  4:205775‑M2/149‑4 (MQ=255)    aaTGGGGCAAAACGCTGCAAAAGGGGCAAAAAAGGGGCAAAAAAAGAGTGGATTATCGTAGCTTATTGTTGTCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACttg                                                                                                                                               <  3:86514‑M2/149‑4 (MQ=255)     aTGGGGCAAAACGCTGCAAAAGGGGCAAAAAAGGGGCAAAAAAAGAGTGGATTATCGTAGCGTATTGTTGTCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACttgt                                                                                                                                              <  2:331118‑M2/149‑5 (MQ=255)      tGGGGCAAAACGCTGCAAAAGGGGCAAAAAAGGGGCAAAAAAAGAGTGGATTATCGTAGCTTATTGTTGTCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGACCTTACttgt                                                                                                                                              <  8:270436‑M2/148‑5 (MQ=255)       ggggCAAAACGCTGCAAAAGGGGCAAAAAAGGGGCAAAAAAAGAGTGGATTATCGTAGCTTATTGTTGTCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACttgtt                                                                                                                                             <  7:362670‑M2/148‑6 (MQ=255)         ggCAAAACGCTGCAAAAGGGGCAAAAAAGGGGCAAAAAAAGAGTGGATTATCGTAGCTTATTGTTGTCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACttgttcag                                                                                                                                          >  5:67647‑M2/1‑141 (MQ=255)           cAAAACGCTGCAAAAGGGGGATATAAGGGGCATAAAAAGAGTGGATTATCGTAGCTTATTGTTGTCGCTGTTGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACttgttgaggt                                                                                                                                        >  1:25190‑M2/1‑139 (MQ=255)           cAAAACGCTGCAAAAGGGGCAAAAAAGGGGCAAAAAAAGAGTGGATTATCGTAGCTTATTGTTGTCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACttgttcaggt                                                                                                                                        >  7:150630‑M2/1‑139 (MQ=255)            aaaaCGCTGCAAAAGGGGCAAAAAAGGGGCAAAAAAAGAGTGGATTATCGTAGCTTATTGTTGTCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACttgttcaggtt                                                                                                                                       >  8:190435‑M2/1‑138 (MQ=255)            aaaaCGCTGCAAAAGGGGCAAAAAAGGGGCAAAAAAAGAGTGGATTATCGTAGCTTATTGTTGTCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACttgttcaggtt                                                                                                                                       <  5:86449‑M2/149‑12 (MQ=255)               aCGCTGCAAAAGGGGCGAAAAAGGGGCAAAAAAAGAGTGGATTATCGTAGCTTATTGTTGTCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACttgttcaggttgta                                                                                                                                    >  1:391805‑M2/1‑135 (MQ=255)               aCGCTGCAAAAGGGGCAAAAAAGGGGCAAAAAAAGAGTGGATTATCGTAGCTTATTGTTGTCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACttgttcaggttgta                                                                                                                                    <  3:145817‑M2/149‑15 (MQ=255)                     cAAAAGGGGCAAAAAAGGGGCAAAAAAAGAGTGGATTATCGTAGCTTATTGTTGTCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACttgttcaggttgtattgttc                                                                                                                              <  8:369499‑M2/149‑21 (MQ=255)                     cAAAAGGGGCAAAAAAGGGGCAAAAAAAGAGTGGATTATCGTAGCTTATTGTTGTCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACttgttcaggttgtattgtt                                                                                                                               >  8:362670‑M2/1‑129 (MQ=255)                      aaaaggggcaaaaaaggggcaaAAAAAGAGTGGATTATCGTAGCTTATTGTTGTCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCACTTACttgttcaggttgtattgttct                                                                                                                             <  6:243247‑M2/149‑22 (MQ=255)                         aggggcaaaaaaggggcaaaaaAAGAGTGTATTATCGTAGCTTATTGTTTTCTCTGATGATATTTAACAAATTTAAAAATAAGTAAAATTATTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACttgttcaggttgtattgttctttc                                                                                                                          >  7:270436‑M2/1‑125 (MQ=255)                             gcaaaaaaggggcaaaaaaAGAGTGGATTATCGTAGCTTATTGTTGTCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTAc                                                                                                                      >  6:208133/1‑149 (MQ=255)                               aaaaaaggggcaaaaaaAGAGTGGATTATCGTAGCTTATTGTTGTCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACt                                                                                                                     >  3:282406/1‑148 (MQ=255)                                    aggggcaaaaaaAGAGTGGATTATCGTAGCTTATTGTTGTCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTc                                                                                                               <  2:93461/149‑1 (MQ=255)                                      gggcaaaaaaAGAGTGGATTATCGTAGCTTATTGTTGGCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGGTGTGATATTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCtt                                                                                                             <  5:206469/149‑1 (MQ=255)                                       ggcaaaacaAGTGTGGATTATCGTAGCTTATTGTTGTCTCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTg                                                                                                            <  2:14116/149‑1 (MQ=255)                                        gcaaaaaaAGAGTGGATTATCGTAGCTTATTGTTGTCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGa                                                                                                           <  6:86449/149‑1 (MQ=255)                                        gcaaaaaaAGAGTGGATTATCGTAGCTTATTGTTGTCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGa                                                                                                           >  7:184387/1‑149 (MQ=255)                                        gcaaaaaaAGAGTGGATTATCGTAGCTTATTGTTGTCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGa                                                                                                           >  3:212197/1‑149 (MQ=255)                                             aaaaGAGTGGATTATCGTAGCTTATTGTTGTCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTg                                                                                                      <  1:331118/149‑1 (MQ=255)                                                 gagTGGATTATCGTAGCTTATTGTTGTCGCTTATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGAc                                                                                                  <  4:322388/149‑1 (MQ=255)                                                          aTCGTAGCTTATTGTTGTCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCATGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTaaaa                                                                                          <  5:208133/148‑1 (MQ=255)                                                          aTCGTAGCTTATTGTTGTCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTaaaa                                                                                          <  4:86514/148‑1 (MQ=255)                                                           tcgtcgATTATTGTTGTCGCTGATGATATTTAACTCATTGAAAAATAAGTAAAATAATTATGAGTCAGAGTGTTGTGATTTTTGCCCTTACTTTTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAg                                                                                         <  5:356090/148‑1 (MQ=255)                                                                  ttATTGTTGTCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTg                                                                                                      <  3:67880/128‑1 (MQ=255)                                                                  ttATTGTTGTCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTg                                                                                                      >  4:67880/1‑128 (MQ=255)                                                                  ttATTGTTGTCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAATCGACTCaa                                                                                 >  3:16161/1‑149 (MQ=255)                                                                        ttgtCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGt                                                                            <  3:205775/148‑1 (MQ=255)                                                                           tCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTtata                                                                        <  5:351759/149‑1 (MQ=255)                                                                           tCGCTGATGATATTTAACACATAGAAAAATAAGTAAAATACTTATCAGTCAGAGAGTGGTGATTTTTGCCCTTACTTGTTCAGGTGGTATTCTTCTTTCTTACTAATTACTTGATTTTCCGACATTTAAAAGCGCCTGAATTCGTgata                                                                        >  2:121396/1‑149 (MQ=255)                                                                             gCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACttgttcaggttgtattgttctttctttgtaatttgttgattttcttgcattatttcagttctctggtactaaatgg                                                                      >  7:369499‑M2/1‑73 (MQ=255)                                                                               tgatgaTATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATgg                                                                     >  1:8412/1‑148 (MQ=255)                                                                                gatgatATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCa                                                                   >  4:348159/1‑149 (MQ=255)                                                                                  tgatATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATc                                                                 <  8:130097/149‑1 (MQ=255)                                                                                  tgatATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATc                                                                 <  4:212197/149‑1 (MQ=255)                                                                                   gatATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTc                                                                                   >  4:251066/1‑130 (MQ=255)                                                                                     tatTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCag                                                               >  1:134138/1‑148 (MQ=255)                                                                                      atTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCag                                                               >  4:170896/1‑147 (MQ=255)                                                                                         tAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCagaaga                                                           <  4:282406/148‑1 (MQ=255)                                                                                          aaCACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAagag                                                          >  3:262963/1‑148 (MQ=255)                                                                                           acacATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGtt                                                                           >  5:37020/1‑130 (MQ=255)                                                                                           acacATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGtt                                                                           <  6:37020/130‑1 (MQ=255)                                                                                           acacATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTa                                                        >  7:257194/1‑149 (MQ=255)                                                                                             acaTTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGACCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTATTTATATTTCATCAGAAGAGTATg                                                      >  2:234779/1‑149 (MQ=255)                                                                                              caTTGTAAAATAAGTATTATTCTTATGAGTCAGAGAGTTGTTATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAACAGCGACTCAATTCGTTATATGTCATCAGAAGAGTATGc                                                     <  1:121396/149‑1 (MQ=255)                                                                                               aTTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGtt                                                                           <  4:224940/126‑1 (MQ=255)                                                                                               aTTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGtt                                                                           >  3:224940/1‑126 (MQ=255)                                                                                               aTTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGAATTTTGCACTTACTTGTTCAGGTTGTATTGTACTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTAAATGGCATAAGAAGAGTATGCg                                                    >  6:339506/1‑149 (MQ=255)                                                                                                ttGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCGt                                                   >  8:4930/1‑149 (MQ=255)                                                                                                    aaaaTAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACttgttcaggttgtattgttctttctttgtaatttgttgattttcttgcattatttcagttctctggtactaaatggggcaaattggg                                                           <  2:213125‑M2/137‑88 (MQ=255)                                                                                                    aaaaTAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACttgttcaggttgtattgttctttctttgtaatttgttgattttcttgcattatttcagttctctggtactaaatggggcaaattggg                                                           >  1:213125‑M2/1‑50 (MQ=255)                                                                                                    aaaaTAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCGTCATg                                               <  8:257194/149‑1 (MQ=255)                                                                                                        tAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCGTCATGCCgg                                           <  5:243247/149‑1 (MQ=255)                                                                                                         aaGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCGTCATGCCgg                                           >  4:148301/1‑148 (MQ=255)                                                                                                          attAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCAGGTTTTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCGTCATGCCGGa                                          <  1:234779/146‑1 (MQ=255)                                                                                                           gTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCGTCATGCCGGAAc                                        <  3:348159/149‑1 (MQ=255)                                                                                                              ttttACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACTTGTACAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTAGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCGTCATTCCGGAACGcc                                     >  1:259015/4‑149 (MQ=255)                                                                                                              aaaTACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCGTCATGCCGGAACGcc                                     >  3:154134/1‑149 (MQ=255)                                                                                                               aaTACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCGTCATGCCGGAACGcc                                     >  4:67159/1‑148 (MQ=255)                                                                                                                   cTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCGTCATGCCGGAACGCCCAGCa                                <  2:119500/149‑1 (MQ=255)                                                                                                                    ttATGAGTCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCGTCATGCCGGAACGCCCAGCa                                >  6:268779/1‑148 (MQ=255)                                                                                                                      aTGAGTCAGAGAGTTGTGATTTTTGCCCTTACttgttcaggttgtattgttctttctttgtaatttgttgattttcttgcattatttcagttctctggtactaaatggggcaaattgggggcaaactttgcaactacgataaccgcgca                             <  5:81824‑M2/149‑118 (MQ=255)                                                                                                                        gAGTCAGAGAGTTGTGATTTTTG‑CCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCGTCATGACGGAACGCCCAGCATAAGa                           >  8:75262/1‑148 (MQ=255)                                                                                                                          gTCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCGTCATGCCGGAACGCCCAGCATAAGaaa                         >  5:152777/1‑149 (MQ=255)                                                                                                                           tCAGAGAGTTGTGATTTTTGCCCTTACttgttcaggttgtattgttctttctttgtaatttgttgattttcttgcattatttcagttctctggtactaaatggggcaaattgggggcaaactttgcaactacgataaccgcgcattcaa                        >  6:81824‑M2/1‑27 (MQ=255)                                                                                                                           tCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCAGGGTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGCCATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCGTCCTGCCGGAACGCCCAGCATAAGAAAt                        >  4:339645/1‑149 (MQ=255)                                                                                                                             agagagTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCGTCATGCCGGAACGCCCAGCATAAGAAATCt                      >  1:283246/1‑149 (MQ=255)                                                                                                                              gagagTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCGTCATGCCGGAACGCCCAGCATAAGAAATCt                      >  1:154861/1‑148 (MQ=255)                                                                                                                                gagTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCGTCATGCCGGAACGCCCAGCATAAGAAATCTGat                   <  2:134138/149‑1 (MQ=255)                                                                                                                                   ttGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCGTCATGCCGGAACGCCCAGCATAAGAAATCTGatat                 >  2:208355/1‑148 (MQ=255)                                                                                                                                     gtgATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCGTCATGCCGGAACGCCCAGCATAAGAAATCTGATATaa               >  3:207205/1‑148 (MQ=255)                                                                                                                                     gtgATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCGTCATGCCGGAACGCCAAGCATAAGAAATCTGATATaa               >  8:292320/1‑148 (MQ=255)                                                                                                                                              gCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCGTCATGCCGGAACGCCCAGCATAAGAAATCTGATATAAAAAACtgtg      <  6:152777/148‑1 (MQ=255)                                                                                                                                               cccTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTAt                                                       <  6:137446/98‑1 (MQ=255)                                                                                                                                               cccTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTAt                                                       >  5:137446/1‑98 (MQ=255)                                                                                                                                               cccTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCGTCATGCCGGAACGCCCAGCATAAGAAATCTGATATAAAAAACTGTGGc    >  3:128678/1‑149 (MQ=255)                                                                                                                                               cccTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCGTCATGCCGGAACGCCCAGCATAAGAAATCTGATATAAAAAACTGTGGc    <  2:8412/149‑1 (MQ=255)                                                                                                                                                 cTTACTTGTTCTGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGTCATTTAAAAGCGACTCATTTCGTTATATGGCATCTGAATAGTATGCGTCATGCCGGAACGCCCAGCATAAGAAATCTGATATAAAAAACTGTGGCgt  <  7:75262/149‑1 (MQ=255)                                                                                                                                                 cTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCGTCATGCCGGAACGCCCAGCATAAGAAATCTGATATAAAAAACTGTGGCgt  <  4:128678/149‑1 (MQ=255)                                                                                                                                                 cTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCGTCATGCCGGAACGCCCAGCATAAGAAATCTGATATAAAAAACTGTGGCgt  <  4:154134/149‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                 AAAAATGGGGCAAAACGCTGCAAAAGGGGCAAAAAAGGGGCAAAAAAAGAGTGGATTATCGTAGCTTATTGTTGTCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCGTCATGCCGGAACGCCCAGCATAAGAAATCTGATATAAAAAACTGTGGCGT  >  NC_000913/1434810‑1435102

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.