New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 80091211 (0.370)4 (0.140) 4/250 2.9 25.3% coding (154/1053 nt) ybhH putative PrpF family isomerase
?NC_000913 = 800937 13 (0.460)coding (179/1053 nt) ybhH putative PrpF family isomerase

GGAACCTCGAGGGGCGCGTTCCTGTTAGCGGAACATTTACCCGAAGATCAAACGCAGCGCGATAAAATATTGATGGCAATTATGGGTTCCGGTAACGATCTGGAAATTGACGGTATTGGCGGCGGTAATCCACTGACCAGTAAAGTCGCCATTATTAGCCGTTCCAGCGATCCGCGTGCTGATGTCGATTATCTGTTTGCGCAGGTAATCGTTCATGAGCAACGTGTCGATACCACGCCTAACTGCGGCAATATGCTGTCTGGTGTTGGGGCATTCGCCATTGAAAATGGTT  >  NC_000913/800792‑801083
                                                                                                                                                 |                                                                                                                                                  
ggAACCTCGAGGGGCGCGTTCCTGTTAGCGGAACATTTACCCGAAGATCAAACGCAGCGCGATAAAATATTGATGGCAATTATGGGTTCCGGTAACGATCTGGAAATTGACGGTATTGGCGGCGGTAATCCACTGACCAGTAAAGTcgc                                                                                                                                                 <  6:149424‑M2/149‑4 (MQ=255)
        gAGGGGCGCGTTCCTGTTAGCGGAACATTTACCCGAAGATCAAACGCAGCGCGATAAAATATTGATGGCAATTATGGGTTCCGGTAACGATCTGGAAATTGACGGTATTGGCGGCGGTAATCCACTGACCAGTAAAGTCGCCAttatta                                                                                                                                         <  5:149424/149‑1 (MQ=255)
                           gCGGAACATTTACCCGAAGATCAAACGCAGCGCGATAAAATATTGATGGCAATTATGGGTTCCGGTAACGATCTGGAAATTGACGGTATTGGCGGCGGTAATCCACTGACCAGTAAAGTCGCCATTATTAGCCGTTCCAGCGATCcgc                                                                                                                       <  7:90464/148‑1 (MQ=255)
                                        ccGAAGATCAAACGCAGCGCCATAAAATATTGATGGCAATTATGGGGTCCGGTAACGATCTGGAAATTGACGGTATTGGCGGCGGTAATCCACTGCCCAGTAAAGTCGCCATTATTAGCCGTTCCAGCGCTCAGCGTGCTGATGTCGAt                                                                                                         >  8:67435/1‑149 (MQ=255)
                                          gAAGATCAAACGCAGCGCGATAAAATATTGATGGCAATTATGGGTTCCGGTAACGATCTGGAAATTGACGGTATTGGCGGCGGTAATCCACTGACCAGTAAAGTCGCCATTATTAGCCGTTCCAGCGATCCGCGTGCTGATGTCGATTa                                                                                                       >  5:136331/1‑149 (MQ=255)
                                                                             aaTTATGGGTTCCGGTAACGATCTGGAAATTGACGGTATTGGCGGCGGTAATCCACTGACCAGTAAAGTcgccaataccgtcaatttccagatcgttaccggaacccataattgccatcaatattttatcgcgctgcgtttgatcttcg                                                                    <  8:120318‑M2/149‑81 (MQ=255)
                                                                                         cGGTAACGATCTGGAAATTGACGGTATTGGCGGCGGTAATCCACTGACCAGTAAAGTcgccaataccgtcaatttccagatcgttaccggaacccataattgccatcaatattttatcgcgctgcgtttgatcttcgggtaaatgttc                                                         >  7:120318‑M2/1‑57 (MQ=255)
                                                                                         cGGTAACGATCTGGAAATTGACGGTATTGGCGGCGGTAATCCACTGACCAGTAAAGTCGCCATTATTAGCCGTTCCAGCGATCCGCGTGCTGATGTCGATTATCTGTTTGCGCAGGTAATCGTTCATGAGCAACGTGTCGATACCACGc                                                        <  6:136331/149‑1 (MQ=255)
                                                                                             aaCGATCTGGAAATTGACGGTATTGGCGGCGGTAATCCACTGACCAGTAAAGTCGCCATTATTAGCCGTTCCAGCGATCCGCGTGCTGATGTCGATTATCTGTTTGCGCAGGTAATCGTTCATGAGCAACGTGTCGATACCACGCCTaa                                                    >  1:139843/1‑149 (MQ=255)
                                                                                                                 tATTGGCGGCGGTAATCCACTGACCAGTAAAGTcgccaataccgtcaatttccagatcgttaccggaacccataattgccatcaatattttatcgcgctgcgtttgatcttcgggtaaa                                                              >  5:55129‑M2/1‑33 (MQ=255)
                                                                                                                 tATTGGCGGCGGTAATCCACTGACCAGTAAAGTcgccaataccgtcaatttccagatcgttaccggaacccataattgccatcaatattttatcgcgctgcgtttgatcttcgggtaaa                                                              <  6:55129‑M2/119‑87 (MQ=255)
                                                                                                                           ggTAATCCACTGACCAGTAAAGTCGCCATTATTAGCCGTTCCCGCGATCCGCGTGCTGATGTCGATTATCTGTTTGCGCAGGTACTCGTTCATGAGCAACGTGTCGATACCACGCCTAACTGCGGCAATATGCTGTCTGGTGTTGGGGc                      <  7:67435/149‑1 (MQ=255)
                                                                                                                                tCCACTGACCAGTAAAGTCGCCATTATTAGCCGTTCCAGCGATCCGCGTGCTGATGTCGATTATCTGTTTGCGCAGGTAATCGTTCATGAGCAACGTGTCGATACCACGCCTAACTGCGGCAATATGCTGTCTGGTGTTGGGGCATTCg                 >  6:1644/1‑149 (MQ=255)
                                                                                                                                   aCTGACCAGTAAAGTCGCCATTATTAGCCGTTCCAGCGATCCGCGTGCTGATGTCGATTATCTGTTTGCGCAGGTAATCGTTCATGAGCAACGTGTCGATACCACGcc                                                       <  4:10721/108‑1 (MQ=255)
                                                                                                                                   aCTGACCAGTAAAGTCGCCATTATTAGCCGTTCCAGCGATCCGCGTGCTGATGTCGATTATCTGTTTGCGCAGGTAATCGTTCATGAGCAACGTGTCGATACCACGcc                                                       >  3:10721/1‑108 (MQ=255)
                                                                                                                                          aGTAAAGTCGCCATTATTAGCCGTTCCAGCGATCCGCGTGCTGATGTCGATTATCTGTTTGCGCAGGTAATCGTTCATGAGCAACGTGTCGATACCACGCCTAACTGCGGCAATATGCTGTCTGGTGTTGGGGCATTCGCCATTGaaaa       >  4:5183/1‑149 (MQ=255)
                                                                                                                                              aaGTCGCCATTATTAGCCGTTCCAGCGATCCGCGTGCTGATGTCGATTATCTGTTTGCGCAGGTAATCGTTCATGAGCAACGTGTCGATACCACGCCTAACTGCGGCAATATGCTGTCTGGTGTTGGGGCATTCGCCATTGAAAATGGt   >  5:30031/1‑149 (MQ=255)
                                                                                                                                               aGTCGCCATTATTAGCCGTTCCAGCGATCCGCGTGCTGATGTCGATTATCTGTTTGCGCAGGTAATCGTTCATGAGCAACGTGTCGATACCACGCCTAACTGCGGCAATATGCTGTCTGGTGTTGGGGCATTCGCCATTGAAAATGGtt  <  5:1644/149‑1 (MQ=255)
                                                                                                                                                 |                                                                                                                                                  
GGAACCTCGAGGGGCGCGTTCCTGTTAGCGGAACATTTACCCGAAGATCAAACGCAGCGCGATAAAATATTGATGGCAATTATGGGTTCCGGTAACGATCTGGAAATTGACGGTATTGGCGGCGGTAATCCACTGACCAGTAAAGTCGCCATTATTAGCCGTTCCAGCGATCCGCGTGCTGATGTCGATTATCTGTTTGCGCAGGTAATCGTTCATGAGCAACGTGTCGATACCACGCCTAACTGCGGCAATATGCTGTCTGGTGTTGGGGCATTCGCCATTGAAAATGGTT  >  NC_000913/800792‑801083

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.