New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3269728	65 (2.200)	4 (0.140)	4/246	2.9	5.9%	noncoding (7/98 nt)	RIP237 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site	RIP237 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site
	?	NC_000913	= 3269739	67 (2.400)					noncoding (18/98 nt)	RIP237 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site	RIP237 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site
Rejected: Frequency below/above cutoff threshold.

CAATATAGACTTAATAACTTCTTACAAAGTCTATTATTAATACCGTAGATATTTATTCATCTTACCCTGTGCACCAAAAGCAAAAACTCACTGACGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAA  >  NC_000913/3269595‑3269884                                                                                                                                                 |                                                                                                                                                  cAATATAGACTTAATAACTTCTTACAAAGTCTATTATTAATACCGTAGATATTTATTCATCTTACCCTGTGCACCAAAAGCAAAAACTCACTGACGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTatca                                                                                                                                               >  3:38238‑M2/1‑145 (MQ=255)           ttAATAACTTCTTACAAAGTCTATTATTAATACCGTAGATATTTATTCATCTTACCCTGTGCACCAAAAGCAAAAACTCACTGACGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGc                                                                                                                                      >  3:84290/1‑148 (MQ=255)                aaCTTCTTACAAAGTCTATTATTAATACCGTAGATATTTATTCATCTTACCCTGTGCACCAAAAGCAAAAACTCACTGACGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCAtctc                                                                                                                                >  5:30633/1‑149 (MQ=255)                 aCTTCTTACAAAGTCTATTATTAATACCGTAGATATTTATTCATCTTACCCTGTGCACCAAAAGCAAAAACTCACTGACGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATctct                                                                                                                               >  6:77281/1‑149 (MQ=255)                     cttACAAAGTCTATTATTAATACCGTAGATATTTATTCATCTTACCCTGTGCACCAAAAGCAAAAACTCACTGACGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCa                                                                                                                            <  5:77281/148‑1 (MQ=255)                               cTATTATTAATACCGTAGATATTTATTCATCTTACCCTGTGCCCCAAAAGCAAAAACTCACTGACGCGGGTTTGAAACTGATGGCAACCGCAAACATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAAt                                                                                                                 >  8:101056/1‑149 (MQ=255)                                tattatTAATACCGTAGATATTTATTCATCTTACCCTGTGCACCAAAAGCAAAAACTCACTGACGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAAtt                                                                                                                >  7:89795/1‑149 (MQ=255)                                  ttattaATACCGTAGATATTTATTCATCTTACCCTGTGCACCAAAAGCAAAAACTCACTGACGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTg                                                                                                              >  2:68171/1‑149 (MQ=255)                                  ttattaATACCGTAGATATTTATTCATCTTACCCTGTGCACCAAAAGCAAAAACTCACTGACGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTg                                                                                                              >  4:7594/1‑149 (MQ=255)                                    attaATACCGTAGATATTTATTCATCTTACCCTGTGCACCAAAAGCAAAAACTCACTGACGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCtt                                                                                                                                                   <  3:114107/110‑1 (MQ=255)                                    attaATACCGTAGATATTTATTCATCTTACCCTGTGCACCAAAAGCAAAAACTCACTGACGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCtt                                                                                                                                                   >  4:114107/1‑110 (MQ=255)                                     ttaATACCGTAGATATTTATTCATCTTACCCTGTGCACCAAAAGCAAAAACTCACTGACGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCg                                                                                                            <  6:30633/148‑1 (MQ=255)                                       aaTACCGTAGATATTTATTCATCTTACCCTGTGCACCAAAAGCAAAAACTCACTGACGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATAAGCGTAGCGCatcaggcatttttgcggttgccatcagtt                                                                                                                      <  1:614‑M2/136‑30 (MQ=255)                                       aaTACCGTAGATATTTATTCATCTTACCCTGTGCACCAAAAGCAAAAACTCACTGACGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATAAGCGTAGCGCatcaggcatttttgcggttgccatcagtt                                                                                                                      >  2:614‑M2/1‑107 (MQ=255)                                                   atttattCATCTTACCCTGTGCACCAAAAGCAAAAACTCACTGACGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAg                                                                                             >  1:52352/1‑149 (MQ=255)                                                       attCATCTTACCCTGTGCACCAAAAGCAAAAACTCACTGACGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGAt                                                                                          >  5:33939/1‑148 (MQ=255)                                                       attCATCTTACCCTGTGCACCAAAAGCAAAAACTCACTGACGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGAt                                                                                          >  1:161985/1‑148 (MQ=255)                                                        ttCATCTTACCCTGTGCACCAAAAGCAAAAACTCACTGACGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATaa                                                                                        <  1:137273/149‑1 (MQ=255)                                                          cATCTTACCCTGTGCACCAAAAGCAAAAACTCACTGACGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAg                                                                                       <  8:89795/148‑1 (MQ=255)                                                                aCCCTGTGCACCAAAAGCAAAAACTCACTGACGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGc                                                                                                             <  5:72584/120‑1 (MQ=255)                                                                aCCCTGTGCACCAAAAGCAAAAACTCACTGACGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGc                                                                                                             >  6:72584/1‑120 (MQ=255)                                                                 cccTGTGCACCAAAAGCAAAAACTCACTGACGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAg                                                                                                 <  6:89009/131‑1 (MQ=255)                                                                 cccTGTGCACCAAAAGCAAAAACTCACTGACGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAg                                                                                                 >  5:89009/1‑131 (MQ=255)                                                                   cTGTGCACCAAAAGCAAAAACTCACTGACGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCAcgc                                                                             <  3:7594/149‑1 (MQ=255)                                                                   cTGTGCACCAAAAGCAAAAACTCACTGACGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCAcgc                                                                             <  6:87845/149‑1 (MQ=255)                                                                         aCCAAAAGCAAAAACTCACTGACGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATc                                                                       >  3:7035/1‑149 (MQ=255)                                                                          ccAAAAGCAAAAACTCACTGACGCGCGTTTGAAACTGAAGGCAACCGCAAAAAAGCCTGATGCGCTACGCTTATCAGGCCTCCGCCATCTCTCCAAAATATTGACTTTGCGAGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATcc                                                                      >  3:109309/1‑149 (MQ=21)                                                                           ctaaaGCAAAAACTCACTGACGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAatata                                                                                                                       <  6:95994/97‑1 (MQ=255)                                                                           cAAAATCAAAAACTCACTGACGCGGGTTAGAAACTGATGGCAACCGCAAAAATGCCTGAAGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAatata                                                                                                                       >  5:95994/1‑99 (MQ=255)                                                                             aaaGCAAAAACTCACTGACGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGc                                                                                                             <  3:96742/107‑1 (MQ=255)                                                                             aaaGCAAAAACTCACTGACGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGc                                                                                                             >  4:96742/1‑107 (MQ=255)                                                                                  aaaaaCTCACTGACGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGaa                                                              <  4:84290/149‑1 (MQ=255)                                                                                    aaaCTCACTGACGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAAt                                                             >  6:1374/1‑148 (MQ=255)                                                                                     aaCTCACTGACGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATaa                                                           <  1:68171/149‑1 (MQ=255)                                                                                        tCACTGACGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAgg                                                                                                >  1:46771/1‑109 (MQ=255)                                                                                        tCACTGACGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAgg                                                                                                <  2:46771/109‑1 (MQ=255)                                                                                          aCTGACGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCAAGAATAAAgcg                                                       >  4:71587/1‑148 (MQ=255)                                                                                              aCGCGGGTTTGAACCTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTGTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTc                                                  <  7:101056/149‑1 (MQ=255)                                                                                              aCGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACt                                                   >  8:11735/1‑148 (MQ=255)                                                                                                  gggTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTcaac                                               >  4:44373/1‑148 (MQ=255)                                                                                                   ggTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTcaacaa                                             >  8:70695/1‑149 (MQ=255)                                                                                                    gTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAAttt                                                                                                               <  3:112279/82‑1 (MQ=255)                                                                                                    gTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAAttt                                                                                                               <  5:36639/82‑1 (MQ=255)                                                                                                    gTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAAttt                                                                                                               >  6:36639/1‑82 (MQ=255)                                                                                                    gTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAAttt                                                                                                               >  4:112279/1‑82 (MQ=255)                                                                                                     tttGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATc                                           <  3:44373/149‑1 (MQ=255)                                                                                                        gAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTg                                         <  2:52352/148‑1 (MQ=255)                                                                                                         aaaCTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGa                                        >  6:27634/1‑148 (MQ=255)                                                                                                          aaCTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGaaa                                      <  2:161985/149‑1 (MQ=255)                                                                                                          aaCTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGaaa                                      <  4:7035/149‑1 (MQ=255)                                                                                                               aTGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCa                                                                                              >  5:62206/1‑88 (MQ=255)                                                                                                               aTGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCa                                                                                              <  6:62206/88‑1 (MQ=255)                                                                                                                tGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGc                                                                                                                                      >  1:51920/1‑47 (MQ=255)                                                                                                                tGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGc                                                                                                                                      <  2:51920/47‑1 (MQ=255)                                                                                                                    aaCCGCAAAAATGCCTGATGCGCTACGGTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCTTCCGGCATGAATAAAGCGCTCTCAACAATCTGAAACCCGCCGGaa                            <  4:109309/149‑1 (MQ=255)                                                                                                                      ccGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCaa                                                                                                                           >  3:91145/1‑52 (MQ=255)                                                                                                                      ccGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCaa                                                                                                                           <  4:91145/52‑1 (MQ=255)                                                                                                                        gCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGaa                                                                                                                  >  8:24965/1‑59 (MQ=255)                                                                                                                        gCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGaa                                                                                                                  <  7:24965/59‑1 (MQ=255)                                                                                                                        gCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGt                        <  7:11735/149‑1 (MQ=255)                                                                                                                          aaaaaTGCCTGATGCGCTACGCTTatcaggcatttttgcggttgccatcagtttcaaacccgcgtcagtgagtttttgcttttggtgcacagggtaagatgaat                                                                   >  7:72093‑M2/1‑24 (MQ=255)                                                                                                                          aaaaaTGCCTGATGCGCTACGCTTatcaggcatttttgcggttgccatcagtttcaaacccgcgtcagtgagtttttgcttttggtgcacagggtaagatgaat                                                                   <  8:72093‑M2/104‑81 (MQ=255)                                                                                                                           aaaaTGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTtta                     <  7:70695/149‑1 (MQ=255)                                                                                                                           aaaaTGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTtta                     <  3:71587/149‑1 (MQ=255)                                                                                                                               tGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTAc                 <  5:1374/149‑1 (MQ=255)                                                                                                                                  cTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATaaa                                                          >  7:14271/1‑105 (MQ=255)                                                                                                                                  cTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATaaa                                                          <  8:14271/105‑1 (MQ=255)                                                                                                                                     aTGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTAc             <  6:144870/147‑1 (MQ=255)                                                                                                                                         gcTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATc                                                                       <  2:115276/85‑1 (MQ=255)                                                                                                                                         gcTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATc                                                                       >  1:115276/1‑85 (MQ=255)                                                                                                                                         gcTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAgg       >  2:159370/1‑149 (MQ=255)                                                                                                                                             cGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTaa    >  8:115597/1‑148 (MQ=255)                                                                                                                                              gCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTaaaa  >  4:31831/1‑149 (MQ=255)                                                                                                                                              gCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTaaaa  <  6:33939/149‑1 (MQ=255)                                                                                                                                                 |                                                                                                                                                  CAATATAGACTTAATAACTTCTTACAAAGTCTATTATTAATACCGTAGATATTTATTCATCTTACCCTGTGCACCAAAAGCAAAAACTCACTGACGCGGGTTTGAAACTGATGGCAACCGCAAAAATGCCTGATGCGCTACGCTTATCAGGCCTACGCCATCTCTGCAATATATTGAATTTGCGTGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAAGCGCACTCAACAATCTGAAACCCGCCGGAACGGTTTATTACGTACATCAGGTAAAA  >  NC_000913/3269595‑3269884

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.