Predicted mutation
evidence seq id position mutation freq annotation gene description
JC JC NC_000913 1,293,033 IS1 (+) +9 bp 100% intergenic (‑111/‑486) hns ← / → tdk global DNA‑binding transcriptional dual regulator H‑NS/thymidine kinase/deoxyuridine kinase

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 1293033 =0 (0.000)95 (1.100) 69/264 NT 100% intergenic (‑111/‑494) hns/tdk global DNA‑binding transcriptional dual regulator H‑NS/thymidine kinase/deoxyuridine kinase
?NC_000913 1978503 = NA (NA)noncoding (768/768 nt) IS1 repeat region
* ? NC_000913 = 12930410 (0.000)57 (0.660) 49/264 NT 100% intergenic (‑119/‑486) hns/tdk global DNA‑binding transcriptional dual regulator H‑NS/thymidine kinase/deoxyuridine kinase
?NC_000913 = 1979270 NA (NA)noncoding (1/768 nt) IS1 repeat region

Only 100 of 168 total aligned reads displayed.

TTGTTCAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAG  >  NC_000913/1292894‑1293186
                                                                                                                                                   |                                                                                                                                                 
ttgttCAGAATTTTAAGTGCCTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAAAAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCg                                                                                                                                                  <  4:21100‑M1/149‑2 (MQ=255)
 cataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTGTGCCGCCaa                                                                                                                                                 >  8:509‑M1/139‑149 (MQ=255)
   ttCAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCggt                                                                                                                                                <  8:124892‑M1/148‑4 (MQ=255)
       ctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTGTGCCGCCaataaata                                                                                                                                           <  8:310782‑M1/17‑1 (MQ=255)
       ctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTGTGCCGCCaataaata                                                                                                                                           <  5:48752‑M1/17‑1 (MQ=255)
            tctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTGTGCCGCCAATAAATATCttt                                                                                                                                      <  2:243987‑M1/22‑1 (MQ=255)
              tgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTGTGCCGCCAATAAatat                                                                                                                                          <  3:181516‑M1/18‑1 (MQ=255)
                aggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggaggcattaccTGTGCCGCCAATAAATATCttt                                                                                                                                      >  7:310782‑M1/124‑145 (MQ=255)
                  gcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTGTGCCGCCAATAAATATCTTTTCATa                                                                                                                                 <  4:298888‑M1/27‑1 (MQ=255)
                   cagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTGTGCCGCCAATAAATATCTTTTCATaa                                                                                                                                <  6:6559‑M1/28‑1 (MQ=255)
                    ttCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAACTCAAAATTGTTCTTTATTTTGTGCCGCCggtgatgctgccaacttact                                                                                                                               >  3:248966‑M1/1‑128 (MQ=255)
                        cctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataacacactatcaataagttggagtcattaccTGTGCCGCCAATAAATATCTTTTCATAAAATTAg                                                                                                                          <  5:12416‑M1/34‑1 (MQ=255)
                         ctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTGTGCCGCCAATAAATATCTTTTCATAAAATTAGc                                                                                                                         <  8:169256‑M1/35‑1 (MQ=255)
                           aTTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCggtgatgctgccaacttactgatttagt                                                                                                                       <  1:377265‑M1/149‑29 (MQ=255)
                            ttGTAGTAATCTCAATCTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCggtgatgctgccaacttactgatttagtg                                                                                                                      >  6:42762‑M1/1‑120 (MQ=255)
                              gtagtaATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCggtgatgctgccaacttactgatttagtgt                                                                                                                     <  8:205580‑M1/148‑31 (MQ=255)
                               tagtaATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCggtgatgctgccaacttactgattta                                                                                                                         <  5:257350‑M1/143‑27 (MQ=255)
                               tagtaATCACAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAAATCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCggtgatgctgccaacttactgatttagtgta                                                                                                                    <  6:284944‑M1/148‑32 (MQ=255)
                                    aTCTCAATCTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCggtgatgctgccaacttactgatttagtgtatgatg                                                                                                               <  5:42762‑M1/148‑37 (MQ=255)
                                      gacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGAcgcg                                                                                                            <  2:41274‑M1/48‑1 (MQ=255)
                                      gacggaagtcgctggcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacacaatcaataagttggagtcattaccTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGAcgcg                                                                                                            >  8:289017‑M1/102‑149 (MQ=255)
                                       tcAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCggtgatgctgccaacttactgatttagtgtatgatggtgt                                                                                                           >  2:322040‑M1/1‑109 (MQ=255)
                                         aaaCTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCggtgatgctgccaacttactgatttagtgtatgatggtgttt                                                                                                         <  2:305663‑M1/149‑43 (MQ=255)
                                          aaCTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAACCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTGAAAATTGTTCTTTATTTTGTGCCGCCggtgatgctgccaacttactgatttagtgtaggatggtgtttt                                                                                                        >  2:108288‑M1/1‑106 (MQ=255)
                                           aagtcgctttcggtctcaaaatcggtggagctgcatgacaaattcatcgggcaatatctgaacataaaacactatcaataagttggagtcattaccTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCata                                                                                                       <  4:111583‑M1/53‑1 (MQ=255)
                                           aCTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCggtgatgctgccaacttactgatttagtgtatgatggtgttttt                                                                                                       <  2:330615‑M1/149‑45 (MQ=255)
                                             gtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCAtata                                                                                                     >  3:247541‑M1/95‑149 (MQ=255)
                                               atatTGGGGTTGTTTGTTGAGGTATTAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTATGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgag                                                                                                    <  4:67042‑M1/148‑48 (MQ=255)
                                               atatTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgag                                                                                                    <  5:257903‑M1/148‑48 (MQ=255)
                                                tatTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggt                                                                                                  >  1:268612‑M1/1‑100 (MQ=255)
                                                     gggTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctc                                                                                              <  2:268612‑M1/148‑54 (MQ=255)
                                                       ttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTa                                                                                           <  6:122285‑M1/65‑1 (MQ=255)
                                                         ctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTaca                                                                                         <  5:19113‑M1/67‑1 (MQ=255)
                                                            aaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTacac                                                                                        >  6:48752‑M1/80‑147 (MQ=255)
                                                               ttgAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttct                                                                                   >  3:61892‑M1/1‑85 (MQ=255)
                                                                 gAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCggtgatgctgccaacttactgatttagtgtatgatggt                                                                                                             >  1:154016‑M1/1‑83 (MQ=255)
                                                                    gTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCggtgatgctgccaacttactgatttagtgtatgatggtgtttttga                                                                                                     >  1:101690‑M1/1‑80 (MQ=255)
                                                                    gTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCggtgatgctgccaacttactgatttagtgtatgatggtgtttttga                                                                                                     <  2:101690‑M1/126‑47 (MQ=255)
                                                                     taataaTAGAGCCTTAAATTCAGTTGTTCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttct                                                                             <  5:174465‑M1/149‑71 (MQ=255)
                                                                     taataaTAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttct                                                                             <  4:61892‑M1/149‑71 (MQ=255)
                                                                         ctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCgcagc                                                                         >  4:153304‑M1/67‑149 (MQ=255)
                                                                         ctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCgcagc                                                                         >  2:272317‑M1/67‑149 (MQ=255)
                                                                         ctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCgcag                                                                          <  7:208780‑M1/82‑1 (MQ=255)
                                                                          tgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCgcagca                                                                        <  4:294543‑M1/84‑1 (MQ=255)
                                                                          ataGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcag                                                                        >  6:232088‑M1/1‑74 (MQ=255)
                                                                          ataGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCggggatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcag                                                                        <  5:133192‑M1/149‑76 (MQ=255)
                                                                            catgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCgg                                                                                                           <  8:146055‑M1/49‑1 (MQ=255)
                                                                            catgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCgcagca                                                                        >  7:27571‑M1/64‑147 (MQ=255)
                                                                                ccTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtcc                                                                  >  8:386409‑M1/1‑68 (MQ=255)
                                                                                ccTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtcc                                                                  >  7:86384‑M1/1‑68 (MQ=255)
                                                                                acaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGa                                                                   >  5:1249‑M1/60‑148 (MQ=255)
                                                                                 cTTAAATTCAGTTGTGCAATCGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCggggatgctgccaacttactgatttagtgtatgatgggggttttgaggtgctccagtggcttctgtttctatcagctgtccc                                                                 <  1:322040‑M1/149‑83 (MQ=255)
                                                                                  aaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGa                                                                   <  2:9554‑M1/89‑1 (MQ=255)
                                                                                  aaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGt                                                                >  3:342070‑M1/58‑149 (MQ=255)
                                                                                          aGTTGTGCAATAGCCTGGACTGTACGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttc                                                         <  4:159306‑M1/148‑91 (MQ=255)
                                                                                           gggcattatctgaacataaaacactatcaataagttggagtcattaccTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTTAGGTTAAAACtt                                                        >  6:19113‑M1/49‑148 (MQ=255)
                                                                                           gggcattatctgaacataaaacactatcaataagttggagtcattaccTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTc                                                       <  3:341167‑M1/101‑1 (MQ=255)
                                                                                           gTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcag                                                       <  5:232088‑M1/149‑93 (MQ=255)
                                                                                             gaattatatgaacataaaacaatatcaataagttggagtcattaccTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTc                                                       >  6:126621‑M1/47‑147 (MQ=255)
                                                                                               tgCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgatgtgctccagtggcttctgtttctatcagctgtccctcctgttcagctac                                                   >  2:362523‑M1/1‑53 (MQ=255)
                                                                                               attatctgaacataaaacactctcaataagttggagtcattaccTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGa                                                   >  4:75376‑M1/45‑149 (MQ=255)
                                                                                               attatctgaacataaaacactatcaataagttggagtcattaccTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGa                                                   <  4:149949‑M1/105‑1 (MQ=255)
                                                                                               attatctgaacataaaacactatcaataagttggagtcattaccTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGa                                                   <  8:175326‑M1/105‑1 (MQ=255)
                                                                                                ttatctgaacataaaacactatcaataagttggagtcattaccTGTGCCGCCAATAAATATCTTTTCATAAAATTAGACAGAAAAGACGCGGCATATAGCACTATTTACACAGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGAt                                                  <  7:273587‑M1/106‑1 (MQ=255)
                                                                                                ttatctgaacataaaacactatcaataagttggagtcattaccTGTGCCGCCAAAAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACTGCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGAt                                                  >  3:136911‑M1/44‑149 (MQ=255)
                                                                                                gCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctact                                                  >  7:50347‑M1/1‑52 (MQ=255)
                                                                                                  atctgaacataaaacactatcaataagttggagtcattaccTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGAtt                                                 >  3:240479‑M1/42‑148 (MQ=255)
                                                                                                  atctgaacataaaacactatcaataagttggagtcattaccTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGAtt                                                 <  2:151857‑M1/107‑1 (MQ=255)
                                                                                                   tctgaacataaaacactatcaataagttggagtcattaccTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCa                                               <  1:71772‑M1/109‑1 (MQ=255)
                                                                                                       ccAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacgggg                                           <  7:386409‑M1/149‑105 (MQ=255)
                                                                                                       aacataaaacactatcaataagttggagtcattaccTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGt                                            >  7:127834‑M1/37‑148 (MQ=255)
                                                                                                        cAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagt                                                                                          <  1:27495‑M1/101‑58 (MQ=255)
                                                                                                        cAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagt                                                                                          >  2:27495‑M1/1‑44 (MQ=255)
                                                                                                          ataaaacactatcaataagttggagtcattaccTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTcaca                                        <  7:238433‑M1/116‑1 (MQ=255)
                                                                                                          ataaaacactatcaataagttggagtcattaccTGTGCCGACAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTAATGTcaca                                        <  5:366604‑M1/116‑1 (MQ=255)
                                                                                                            aaaacactatcaataagttggagtcattaccTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACAtt                                      <  7:360023‑M1/118‑1 (MQ=255)
                                                                                                              aacactatcaataagttggagtcattaccTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACAttt                                     >  3:111583‑M1/30‑148 (MQ=255)
                                                                                                                 actatcaataagttggagtcattaccTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATg                                 >  3:294543‑M1/27‑149 (MQ=255)
                                                                                                                 aaGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaa                                 >  2:397723‑M1/1‑35 (MQ=255)
                                                                                                                  ctatcaataagttggagtcataaccTCTGCCGCCAATATATATCTTTTCAAAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTAACACCGATGAGATCGCACCACGTGAGGTTAAAACTTCCTGATTCATTTCAcatattatcg                                <  6:114179‑M1/124‑3 (MQ=255)
                                                                                                                  aGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaac                                <  8:86384‑M1/149‑116 (MQ=255)
                                                                                                                   tatcaataagttggagtcattaccTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTc                                                       >  4:256278‑M1/25‑125 (MQ=255)
                                                                                                                   tatcaataagttggagtcattaccTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATggg                               <  7:159651‑M1/125‑1 (MQ=255)
                                                                                                                    gAATTCAAAATTGTTCTTTATTTTGTGCCGCCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacgg                              <  3:69914‑M1/149‑118 (MQ=255)
                                                                                                                     tcaataagttggagtcattaccTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATgggg                              >  4:229670‑M1/23‑148 (MQ=255)
                                                                                                                        ataagttggagtcattaccTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGAt                          <  7:211596‑M1/130‑1 (MQ=255)
                                                                                                                         taagttggagtcattaccTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATg                                 >  4:41461‑M1/19‑141 (MQ=255)
                                                                                                                         taagttggagtcattaccTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATg                                 <  3:41461‑M1/123‑1 (MQ=255)
                                                                                                                               ggagtcattaccTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTAACACAGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCg                     <  3:180937‑M1/135‑1 (MQ=255)
                                                                                                                                   tcattaccTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATATCGCAGCACGAGAGGTTAAAACTTCCTGATTCATGACACATTTTATGCGGAGAGTATCGTAGGCt               <  2:203557‑M1/141‑1 (MQ=255)
                                                                                                                                    tttATTTTGTGCCGCCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaactgcaaaagcaccgcagga              >  8:366882‑M1/1‑16 (MQ=255)
                                                                                                                                      ttaccGGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGGGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGGTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTgac            >  6:60982‑M1/6‑149 (MQ=255)
                                                                                                                                        ttttGTGCCGCCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacat           >  2:90420‑M1/1‑12 (MQ=255)
                                                                                                                                        accTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTgacga          <  4:336372‑M1/146‑1 (MQ=255)
                                                                                                                                            gtgCCGCCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcg      >  7:122626‑M1/1‑8 (MQ=255)
                                                                                                                                               ccgccggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgct    <  1:108288‑M1/148‑144 (MQ=255)
                                                                                                                                               ccgccAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTc    <  2:71772/148‑1 (MQ=255)
                                                                                                                                               ccgccAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCa   <  8:296133/149‑1 (MQ=255)
                                                                                                                                                cgccggtgatgctgccaacttactgatttagtgtatgatggtgtttttgatgtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctat  <  1:362523‑M1/149‑146 (MQ=255)
                                                                                                                                                cgccAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAg  >  5:330808/1‑149 (MQ=255)
                                                                                                                                                   |                                                                                                                                                 
TTGTTCAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAG  >  NC_000913/1292894‑1293186

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.