Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 1,393,457 IS186 (–) +5 bp coding (231‑235/1614 nt) mppA → murein tripeptide (L‑ala‑gamma‑D‑glutamyl‑meso‑DAP) transporter subunit

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 608007 =NA (NA)113 (0.920) 78/272 0.4 100% noncoding (1/1345 nt) IS186 repeat region
?NC_000913 1393457 = 0 (0.000)coding (231/1614 nt) mppA murein tripeptide (L‑ala‑gamma‑D‑glutamyl‑meso‑DAP) transporter subunit
* ? NC_000913 = 609351NA (NA)94 (0.770) 73/272 0.6 100% noncoding (1345/1345 nt) IS186 repeat region
?NC_000913 = 1393461 0 (0.000)coding (235/1614 nt) mppA murein tripeptide (L‑ala‑gamma‑D‑glutamyl‑meso‑DAP) transporter subunit

Only 100 of 117 total aligned reads displayed.

ATGGTCATCTGGAGCTTACAGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/609200‑609351
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggaCAATCTCCCCTTTTTCGTTCTGATTCACCAGACCTTCAAACAGATCGCGAATGACCTGAATCTCTGGCAGGCCCACGGCTTTAGCGGGATCCAGCGACGCAGGCTCATCTTTAATGTGGCGCACCAGCTCCTGCTTCTCTGCCAGTAC  <  NC_000913/1393461‑1393314
                                                                                                                                                                                                                                                                                                            
ATGGTCATCTGGAGCTTACAGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATG                                                                                                                                                         <  4:113643/149‑1
ATGGTCATCTGGAGCTTACAGGTGGCCATTCGTGGGACAGTATCCCTGACAGACTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACTAGGCACCGAGGCGTCTCATTCTTCAGATGGTTCAACCCTTAAGTTATCGCTTATG                                                                                                                                                         <  6:439298/149‑1
 TGGTCATCTGGAGCTTACAGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGG                                                                                                                                                        <  7:14839/149‑1
 TGGTCATCTGGAGCTTACAGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGG                                                                                                                                                        <  4:131653/149‑1
 TGGTCATCTGGAGCTTACAGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGG                                                                                                                                                        <  4:121514/149‑1
   GTCATCTGGAGCTTACAGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGA                                                                                                                                                      <  4:388359/149‑1
   GTCATCTGGAGCTTACAGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGA                                                                                                                                                      <  8:345794/149‑1
   GTCATCTGGAGCTTACAGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGA                                                                                                                                                      <  3:44358/149‑1
   GTCATCTGGAGCTTACAGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGA                                                                                                                                                      <  7:338777/149‑1
   GTCATCTGGAGCTTACAGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGG                                                                                                                                                       <  3:8657/148‑1
    TCATCTGGAGCTTACAGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGCGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGA                                                                                                                                                      >  6:138593/1‑148
    TCATCTGGAGCTTACAGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGA                                                                                                                                                      >  6:173306/1‑148
             GCTTACAGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGACAATCTCCCC                                                                                                                                            <  5:230244/149‑1
                  CAGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGACAATCTCCCCTTTTT                                                                                                                                       <  8:19821/149‑1
                  CAGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGACAATCTCCCCTTTT                                                                                                                                        <  7:419996/148‑1
                   AGGTGGCCATTCGTGGGAAAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGAATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGACAATCTCCCCTTTTTC                                                                                                                                      >  8:512212/1‑149
                     GTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGACAATCTCCCCTTTTTCGT                                                                                                                                    >  6:226229/1‑149
                      TGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGA                                                                                                                                                      <  6:469844/130‑1
                       GGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGACAATCTCCCCTTTTTCGTTC                                                                                                                                  >  3:139775/1‑149
                        GCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGACAATCTCCCCTTTTTCGTTCT                                                                                                                                 <  5:225163/149‑1
                        GCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGACAATCTCCCCTTTTTCGTTC                                                                                                                                  <  3:340941/148‑1
                          CATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGACAATCTCCCCTTTTTCGTTCTGA                                                                                                                               >  4:497467/1‑149
                          CATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGACAATCTCCCCTTTTTCGTTCTGA                                                                                                                               <  5:226229/149‑1
                          CATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGACAATCTCCCCTTTTTCGTTCTGA                                                                                                                               <  1:427164/149‑1
                          CATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGACAATCTCCCCTTTTTCGTTCTGA                                                                                                                               <  1:298308/149‑1
                           ATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGACAATCTCCCCTTTTTCGTTCTGAT                                                                                                                              >  6:79088/1‑149
                           ATTCGTGGGACAGTATCCCTGACAGCCAACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGACAATCTCCCCTTTTTCGTTCTGAT                                                                                                                              >  2:306310/1‑149
                               GTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGACAATCTCCCCTTTTTCGTTCTGATTCAC                                                                                                                          <  1:11469/149‑1
                                 GGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTTAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGACAATCTCCCCTTTTTCGTTCTGATTCACCA                                                                                                                        <  2:499877/149‑1
                                  GGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGACAATCTCCCCTTTTTCGTTCTGATTCAC                                                                                                                          >  3:500192/1‑146
                                   GACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATGCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGACAATCTCCCCTTTTTCGTTCTGATTCACCAGA                                                                                                                      <  2:220960/149‑1
                                                ACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGACAATCTCCCCTTTTTCGTTCTGATTCACCAGACCTTCAAACAGA                                                                                                          <  3:308033/148‑1
                                                    CCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGACAATCTCCCCTTTTTCGTTCTGATTCACCAGACCTTCAAACAGATCGC                                                                                                      >  8:200675/1‑148
                                                    CCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGACAATCTCCCCTTTTTCGTTCTGATTCACCAGACCTTCAAACAGATCGC                                                                                                      >  3:167565/1‑148
                                                     CTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGACAATCTCCCCTTTTTCGTTCTGATTCACCAGACCTTCAAACAGATCGCG                                                                                                     >  5:392959/1‑148
                                                     CTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGACAATCTCCCCTTTTTCGTTCTGATTCACCAGACCTTCAAACAGATCGCG                                                                                                     >  2:348581/1‑148
                                                       ACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGACAATCTCCCCTTTTTCGTTCTGATTCACCAGACCTTC                                                                                                                 <  7:14310/134‑1
                                                       ACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGACAATCTCCCCTTTTTCGTTCTGATTCACCAGACCTTC                                                                                                                 >  8:14310/1‑134
                                                          AAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGACAATCTCCCCTTTTTCGTTCTGATTCACCAGACCTTCAAACAGATCGCGAATGAC                                                                                               <  3:312754/149‑1
                                                           AACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGACAATCTCCCCTTTTTCGTTCTGATTCACCAGACCTTCAAACAGATCGCGAATGAC                                                                                               >  8:424988/1‑148
                                                           AACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGACAATCTCCCCTTTTTCGTTCTGATTCACCAGACCTTCAAACAGATCGCGAATGAC                                                                                               <  7:424988/148‑1
                                                           AACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGACAATCTCCCCTTTTTCGTTCTGATTCACCAGACCTT                                                                                                                  >  3:16227/1‑129
                                                           AACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGACAATCTCCCCTTTTTCGTTCTGATTCACCAGACCTT                                                                                                                  <  4:16227/129‑1
                                                                AATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCACCCCTTAAGTTAGCGCTTATGGGACAATCTCCCCTTTTTCGTTCGGATTCACAAGACCTTCAAACAGATAGCGAATGACCTGAAT                                                                                         >  4:433663/1‑149
                                                                AATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGACAATCTCCCCTTTTTCGTTCTGATTCACCAGACCTTCAAACAGATCGCGAATGACCTGAAT                                                                                         >  3:136880/1‑149
                                                                  TTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGACAATCTCCCCTTTTTCGTTCTGATTCACCAGACCTTCAAACAGATCGCGAATGACCTGAATCT                                                                                       <  7:52640/149‑1
                                                                     AAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGACAATCTCCCCTTTTTCGTTCTGATTCACCAGACCTTCAAACAGATCGCGAATGACCTGAATCTCTG                                                                                    <  4:136880/149‑1
                                                                     AAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGACAATCTCCCCTTTTTCGTTCTGATTCACCAGACCTTCAAACAGATCGCGAATGACCTGAATCTCTG                                                                                    >  5:210413/1‑149
                                                                        AACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGACAATCTCCCCTTTTTCGTTCTGATTCACCAGACCTTCAAACAGATCGCGAATGACCTGAATCTCTGGCA                                                                                 <  7:544857/149‑1
                                                                        AACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGACAATCTCCCCTTTTTCGTTCTGATTCACCAGACCTTCAAACAGATCGCGAATGACCTGAATCTCTGG                                                                                   >  2:105903/1‑147
                                                                             GAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGACAATCTCCCCTTTTTCGTTCTGATTCACCAGACCTTCAAACAGATCGCGAATGACCTGAATCTCTGGCAGGCC                                                                             >  1:374750/1‑148
                                                                                 CATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGACAATCTCCCCTTTTTCGTTCTGATTCACCAGACCTTCAAACAGATCGCGAATGACCTGAATCTCTGGCAGGCCCACGG                                                                        <  2:277497/149‑1
                                                                                  ATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGACAATCTCCCCTTTTTCGTTCTGATTCACCAGACCTTCAAACAGATCGCGAATGACCTGAATCTCTGGCAGGCCCACGGC                                                                       <  1:306310/149‑1
                                                                                      TCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGACAATCTCCCCTTTTTCGTTCTGATTCACCAGACCTTCAAACAGATCGCGAATGACCTGAATCTCTGGCAGGCCCACGGCTTTA                                                                   <  1:494842/149‑1
                                                                                      TCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGACAATCTCCCCTTTTTCGTTCTGATTCACCAGACCTTCAAACAGATCGCGAATGACCTGAATCTCTG                                                                                    >  6:809/1‑132
                                                                                       CTTAACAAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGACAATCTCCCCTTTTTCGTT                                                                                                                                   >  4:249596/1‑84
                                                                                       CTTAACAAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGACAATCTCCCCTTTTTCGTT                                                                                                                                   <  3:249596/84‑1
                                                                                          AACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGACAATCTCCCCTTTTTCGTTCTGATTCACCAGACCTTCAAACAGATCGCGAATGACCTGAATCTCTGGCAGGCCCACGGCTTTAGCGG                                                               >  1:473333/1‑149
                                                                                           ACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGACAATCTCCCCTTTTTCGTTCTGATTCACCAGACCTTCAAACAGATCGCGAATGACCTGAATCTCTGGCAGGCCCACGGCTTTAGCGG                                                               <  4:139775/148‑1
                                                                                           ACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGACAATCTCCCCTTTTTCGTTCTGATTCACCAGACCTTCAAACAGATCGCGAATGACCTGAATCTCTGGCAGGCCCACGGCTTTAGCGG                                                               >  6:311836/1‑148
                                                                                            CGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGACAATCTCCCCTTTTTCGTTCTGATTCACCAGACCTTCAAACAGATCGCGAATGACCTGAATCTCTGGCAGGCCCACGGCTTTAGCGGGA                                                             <  3:497467/149‑1
                                                                                             GAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGACAATCTCCCCTTTTTCGTTCTGATTCACCAGACCTTCAAACAGATCGCGAATGACCTGAATCTCTGGCAGGCCCACGGCTTTAGCGGGAT                                                            >  7:444392/1‑149
                                                                                              AGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGACAATCTCCCCTTTTTCGTTCTGATTCACCAGACCTTCAAACAGATCGCGAATGACCTGAATCTCTGGCAGGCCCACGGCTTTAGCGGGATC                                                           <  5:79088/149‑1
                                                                                                  ACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGACAATCTCCCCTTTTTCGTTCTGATTCACCAGACCTTCAAACAGATCGCGAATGACCTGAATCTCTGGCAGGCCCACGGCTTTAGCGGGATCCAGC                                                       >  4:194180/1‑149
                                                                                                  ACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGG                                                                                                                                                       >  7:410826/1‑53
                                                                                                  ACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGG                                                                                                                                                       <  8:410826/53‑1
                                                                                                    CGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGACAATCTCCCCTTTTTCGTTCTGATTCACCAGACCTTCAAACAGATCGCGAATGACCTGAATCTCTGGCAGGCCCACGGCTTTAGCGGGATCCAGCGA                                                     <  2:473333/149‑1
                                                                                                          GTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGACAATCTCCCCTTTTTCGTTCTGATTCACCAGACCTTCAAACAGATCGCGAATGACCTGAATCTCTGGCAGGCCCACGGCTTTAGCGGGATCCAGCGACGCAGG                                               >  6:178288/1‑149
                                                                                                           TCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGACAATCTCCCCTTTTTCGTTCTGATTCACCAGACCTTCAAACAGATCGCGAATGACCTGAATCTCTGGCAGGCCCACGGCTTTAGCGGGATCCAGCGACGCAGGC                                              <  1:278971/149‑1
                                                                                                               ATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGACAATCTCCCCTTTTTCGTTCTGATTCACCAGACCTTCAAACAGATCGCGAATGACCTGAATCTCTGGCAGGCCCACGGCTTTAGCGGGATCCAGCGACGCAGGCTCAT                                          <  1:105903/149‑1
                                                                                                               ATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGACAATCTCCCCTTTTTCGTTCTGATTCACCAGACCTTCAAACAGATCGCGAATGACCTGAATCTCTGGCAGGCCCACGGCTTTAGCGGGATCCAGCGACGCAGGCTCAT                                          <  1:348581/149‑1
                                                                                                               ATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGACAATCTCCCCTTTTTCGTTCTGATTCACCAGACCTTCAAACAGATCGCGAATGACCTGAATCTCTGGCAGGCCCACGGCTTTAGCGGGATCCAGCGACGCAGGCTCAT                                          >  1:169497/1‑149
                                                                                                               ATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGACAATCTCCCCTTTTTCGTTCTGATTCACCAGACCTTCAAACAGATCGCGAATGACCTGAATCTCTGGC                                                                                  <  5:450423/109‑1
                                                                                                               ATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGACAATCTCCCCTTTTTCGTTCTGATTCACCAGACCTTCAAACAGATCGCGAATGACCTGAATCTCTGGC                                                                                  >  6:450423/1‑109
                                                                                                                TTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGACAATCTCCCCTTTTTCGTTCTGATTCACCAGACCTTCAAACAGATCGCGAATGACCTGAATCTCTGGCAGGCCCACGGCTTTAGCGGGATCCAGCGACGCAGGCTCATC                                         <  6:411159/149‑1
                                                                                                                 TCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGACAATCTCCCCTTTTTCGTTCTGATTCACCAGACCTTCAAACAGATCGCGAAT                                                                                                  >  2:322526/1‑91
                                                                                                                  CTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGACAATCTCCCCTTTTTCGTTCTGATTCACCAGACCTTCAAACAGATCGCGAATGACCTGAATCTCTGGCAGGCCCACGGCTTTAGCGGGATCCAGCGACGCAGGCTCATCT                                        <  4:395540/148‑1
                                                                                                                   TTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGACAATCTCCCCTTTTTCGTTCTGATTCACCAGACCTTCAAACAGATCGCGAATGACCTGAATCTCTGGCAGGCCCACGGCTTTAGCGGGATCCAGCGACGCAGGCTCATCTT                                       >  6:165922/1‑148
                                                                                                                   TTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGACAATCTCCCCTTTTTCGTTCTGATTCACCAGACCTTCAAACAGATCGCGAATGACCTGAATCTCTGGCAGGCCCACGGCTTTAGCGGGATCCAGCGACGCAGGCTCATCTT                                       >  5:52300/1‑148
                                                                                                                     CAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGACAATCTCCCCTTTTTCGTTCTGATTCACCAGCCCTTCAACCAGATCGCGAATGACCTGAATCTCTGGCAGGCCCACGGCTTTAGCGGGATCCAGCGACGCAGGCTCATCTT                                       <  2:94686/146‑1
                                                                                                                     CAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGACAATCTCCCCTTTTTCGTTCTGATTCACCAGACCTTCAAACAGATCGCGAATGACCTGAATCTCTGGCAGGCCCACGGCTTTAGCGGGATCCAGCGACGCAGGCTCATCTTTA                                     <  6:210413/148‑1
                                                                                                                     CAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGACAATCTCCCCTTTTTCGTTCTGATTCACCAGACCTTCAAACAGATCGCGAATGACCTGAATCTCTGGCAGGCCCACGGCTTTAGCGGGATCCAGCGACGCAGGCTCATCTT                                       <  4:500192/146‑1
                                                                                                                      AGATGGTTCAACCCTTAAGTTAGCGCTTATGGGACAATCTCCCCTTTTTCGTGCTGATTCACCAGACCTTCAAACAGATCGCGAATGACCTGAATCTCTGGCAGGCCCACGGCTTTAGCGGGATCCAGCGACGCAGGCTCATCTTTAAT                                   <  5:311836/149‑1
                                                                                                                         TGGTTCAACCCTTAAGTTAGCGCTTATGGGACAATCTCCCCTTTTTCGTTCTGATTCACCAGACCTTCAAACAGATCGCGAATGACCTGAATCTCTGGCAGGCCCACGGCTTTAGCGGGATCCAGCGACGCAGGCTCATCTTTAATGTG                                <  7:200675/149‑1
                                                                                                                         TGGTTCAACCATTAAGTTAGCGCTTATGGGACAATCTCCCCTTTTTCGTTCTGATTCACCAGACCTTCAAACAGATCGCGAATGACCTGAATCTCTGGCAGGCCCACCGCTTTAGAGGGATCCAGCGACGCAGGCTCAGCTTTAATGTG                                >  5:67207/1‑149
                                                                                                                          GGTTCAACCCTTAAGTTAGCGCTTATGGGACAATCTCCCCTTTTTCGTTCTGATTCACCAGACCTTCAAACAGATCGCGAATGACCTGAATCTCTGGCAGGCCCACGGCTTTAGCGGGATCCAGCGACGCAGGCTCATCTTTAATGTG                                <  4:167565/148‑1
                                                                                                                               AACCCTTAAGTTAGCGCTTATGGGACAATCTCCCCTTTTTCGTTCTGATTCACCAGACCTTCAAACAGATCGCGAATGACCTGAATCTCTGGCAGGCCCACGGCTTTAGCGGGATCCAGCGACGCAGGCTCATCTTTAATGTGGCGCAC                          <  3:194180/149‑1
                                                                                                                                  CCTTAAGTTAGCGCTTATGGGACAATCTCCCCTTTTTCGTTCTGATTCACCAGACCTTCAAACAGATCGCGAATGACCTGAATCTCT                                                                                     >  3:485793/1‑87
                                                                                                                                  CCTTAAGTTAGCGCTTATGGGACAATCTCCCCTTTTTCGTTCTGATTCACCAGACCTTCAAACAGATCGCGAATGACCTGAATCTCT                                                                                     <  4:485793/87‑1
                                                                                                                                   CTTAAGTTAGCGCTTATGGGACAATCTCCCCTTTTTCGTTCTGATTCACCAGACCTTCAAACAGATCGCGAATGACCTGAATCTCTGGCAGGCCCACGGCTTTAGCGGGATCCAGCGACGCAGGCTCATCTTTAATGTGGCGCACCAGC                      >  5:535078/1‑149
                                                                                                                                    TTAAGTTAGCGCTTATGGGACAATCTCCCCTTTTTCGTTCTGATTCACCAGACCTTCAAACGGATCGCGAATGACCTGAATCTCTGGCAGGCCCACGGCTTTAGCGGGATCCAGCGACGCAGGCTCATCTTTAATGTGGCGCACCAGCT                     >  4:441937/1‑149
                                                                                                                                    TTAAGTTAGCGCTTATGGGACAATCTCCCCTTTTTCGTTCTGATTCACCAGACCTTCAAACAGATCGCGAATGACCTGAATCTCTGGCAGGCCCACGGCTTTAGCGGGATCCAGCGACGCAGGCTCATCTTTAATGTGGCGCACCAGCT                     >  6:306748/1‑149
                                                                                                                                         TTAGCGCTTATGGGACAATCTCCCCTTTTTCGTTCTGATTCACCAGACCTTCAAACAGATCGCGAATGACCTGAATCTCTGGCAGGCCCACGGCTTTAGCGGGATCCAGCGACGCAGGCTCATCTTTAATGTGGCGCACCAGCTCCTGC                <  8:444392/149‑1
                                                                                                                                               CTTATGGGACAATCTCCCCTTTTTCGTTCTGATTCACCAGACCTTCAAACGGATCGCGAATGACCTGAATCTCTGGCAGGCCCACGGCTTTAGCGGGATCCAGCGACGCAGGCTCATCTTTAATGTGGCGCACCAGCTCCTGCTTCTCT          <  3:441937/149‑1
                                                                                                                                                TTATGGGACAATCTCCCCTTTTTCGTTCTGATTCACCAGACCTTCAAACAGATCGCGAATGACCTGAATCTCTGGCAGGCCCACGGCTTTAGCGGGATCCAGCGACGCAGGCTCATCTTTAATGTGGCGCACCAGCTCCTGCTTCTCTG         >  3:320750/1‑149
                                                                                                                                                  ATGGGACAATCTCCCCTTTTTCGTTCTGATTCACCAGACCTTCAAACAGATCGCGAATGACCTGAATCTCTGGCAGGCCCACGGCTTTAGCGGGATCCAGCGACGCAGGCTCATCTTTAATGTGGCGCACCAGCTCCTGCTTCTCTGC        <  5:173306/148‑1
                                                                                                                                                     GGACAATCTCCCCTTTTTCGTTCTGATTCACCAGACCTTCAAACAGATCGCGAATGACCTGAATCTCTGGCAGGCCCACGGCTTTAGCGGGATCCAGCGACGCAGGCTCATCTTTAATGTGGCGCACCAGCTCCTGCTTCTCTGCCAG     >  3:466140/1‑148
                                                                                                                                                     GGACAATCTCCCCTTTTTCGTTCTGATTCACCAGACCTTCAAACAGATCGCGAATGACCTGAATCTCTGGCAGGCCCACGGCTTTAGCGGGATCCAGCGACGCAGGCTCATCTTTAATGTG                                >  7:145441/1‑121
                                                                                                                                                     GGACAATCTCCCCTTTTTCGTTCTGATTCACCAGACCTTCAAACAGATCGCGAATGACCTGAATCTCTGGCAGGCCCACGGCTTTAGCGGGATCCAGCGACGCAGGCTCATCTTTAATGTG                                <  8:145441/121‑1
                                                                                                                                                       ACAATCTCCCCTTTTTCGTTCTGATTCACCAGACCTTCAAACAGATCGCGAATGACCTGAATCTCTGGCAGGCCCACGGCTTTAGCGGGATCCAGCGACGCAGGCTCATCTTTAATGTGGCGCACCAGCTCCTGCTTCTCTGCCAGTAC  >  7:293800/1‑149
                                                                                                                                                                                                                                                                                                            
ATGGTCATCTGGAGCTTACAGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/609200‑609351
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggaCAATCTCCCCTTTTTCGTTCTGATTCACCAGACCTTCAAACAGATCGCGAATGACCTGAATCTCTGGCAGGCCCACGGCTTTAGCGGGATCCAGCGACGCAGGCTCATCTTTAATGTGGCGCACCAGCTCCTGCTTCTCTGCCAGTAC  <  NC_000913/1393461‑1393314

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.