| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,454,209 | T→C | 5.3% | E397G (GAA→GGA) | gspA ← | general secretory pathway component, cryptic |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,454,209 | 0 | T | C | 5.3% | 235.2 / 2.9 | 75 | E397G (GAA→GGA) | gspA | general secretory pathway component, cryptic |
| Reads supporting (aligned to +/- strand): ref base T (33/38); new base C (2/2); total (35/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.08e-01 | |||||||||||
TTGAAATTGCTTTATTTTTTCTACCAACAAGGGACGCCACTCCGCCGAAGGTTCTGTCGAAATATGCAATGCGCGGTTTAACATCGTTTCCAGCCAGAGAATCTCTTCCTCGCTGCTATCACGCGTAATGGTACTCTCCCCTTCCGGCGACATTTTCCACAACAGAAGATAATCACCCGTCCATACCGACTCAAACCATTTATGTGTCAGCGTCCACGTTTGCTGACCTACGAGGACATCAACGCTAGCCTCACCGACGCGAACGACCACAACAGGCAATTTTTTGTC > NC_000913/3454067‑3454354 | ttGAAATTGCTTTATTTTTTCTACCAACAAGGGACGCCACTCCGCCGAAGGTTCTGTCGAAATATGCAATGCGCGGTTTAACATCGTTTCCAGCCAGAGAATCTCTTCCTCGCTGCTATCACGCGTAATGGTACTCTCCCCTTCCgg < 2:53748/147‑1 (MQ=255) aaaTTGCTTTATTTTTTCTACCAACAAGGGACGCCACTCCGCCGAAGGTTCTGTCGAAATATGCAATGCGCGGTTTAACATCGTTTCCAGCCAGAGAATCTCTTCCTCGCTGCTATCACGCGTAATGGTACTCTCCCCTTCCGGCGa < 8:237953/147‑1 (MQ=255) ttGCTTTATTTTTTCTACCAACAAGGGACGCCACTCCGCCGAAGGTTCTGTCGAAATATGCAATGCGCGGTTTAACATCGTTTCCAGCCAGAGATTCTCTTCCTCGCTGCTATCACGCGTAATGGTACTCTCCCCTTCCGGCGACAtt > 4:112106/1‑148 (MQ=255) ttATTTTTTCTACCAACAAGGGACGCCACTCCGCCGAAGGTTCTGTCGAAATATGCAATGCGCGGTTTAACATCGTTTCCAGCCAGAGAATCTCTTCCTCGCTGCTATCACGCGTAATGGTACTCTCCCCTTCCGGCGACATTTTCca > 1:189351/1‑148 (MQ=255) aaTTTTATCTACCAACAAGCGACGCCACTCCGCCGAAGGTTCTGTCGAAATATGCAATGCGCGGTTAAACATCGATTCCAGCCAGTGAATCTGTTCCTCGCTTCTATCACGCGTAATGGTACTCTCCCCTTCCGGCGACATTTTCca < 6:108837/146‑1 (MQ=255) tttttCTACCAACAAGGGACGCCACTCCGCCGAAGGTTCTGTCGAAATATGCAATGCGCGGTTTAAGATCGTTTCCAGCCAGAGAATCTCTTCCTCGCTGCTATCACGCGTAATGGTACTCTCCCCTTCCGGCGACATTTTCCacaa > 4:236047/1‑147 (MQ=255) tttttCTACCAACAAGGGACGCCACTCCGCCGAAGGTTCTGTCGAAATATGCAATGCGCGGTTTAACATCGTTTCCAGCCAGAGAATCTCTTCCTCGCTGCTATCACGCGTAATGGTACTCTCCCCTTCCGGCGACATTTTCCacaa > 1:210453/1‑147 (MQ=255) tCTACCAACAAGCGACGCCACTCCGCCGAAGGTTCTGGCGAAATATGCAATGCGCGGTTTAACATCGTTTCCAGCCAGAGAATCTCTTCCTCGCTGCTATCACGCGTAATGGTACTCTCCCCTTCCGGCGACATTTTCCACAACaga < 6:285775/147‑1 (MQ=255) caacaaGGGACGCCACTCCGCCGAAGGTTCTGTCGAAATATGCAATGCGCGGTTTAACATCGTTTCCAGCCAGAGAATCTCTTCCTCGCTGCTATCACGCGTAATGGTACTCTCCCCTTCCGGCGACATTTTCCACAACAGAAGATaa < 3:375551/148‑1 (MQ=255) aacaaGGGACGCCACTCCGCCGAAGGTTCTGTCGAAATATGCAATGCGCGGTTTAACATCGTTTCCAGCCAGAGAATCTCTTCCTCGCTGCTATCACGCGTAATGGTACTCTCCCCTTCCGGCGACATTTTCCACAACAGAAGATAAt > 7:324349/1‑148 (MQ=255) aacaaGGGACGCCACTCCGCCGAAGGTTCTGTCGAAATATGCAATGCGCGGTTTAACATCGTTTCCAGCCAGAGAATCTCTTCCTCGCTGCTATCACGCGTAATGGTACTCTCCCCTTCCGGCGACATTTTCCACAACAGAAGATAAt > 7:238818/1‑148 (MQ=255) acaaGGGACGCCACTCCGCCGAAGGTTCTGTCGAAATATGCAATGCGCGGTTTAACATCGTTTCCAGCCAGAGAATCTCTTCCTCGCTGCTATCACGCGTAATGGTACTCTCCCCTTCCGGCGACATTTTCCACAACAGAAGATAAt > 6:6681/1‑147 (MQ=255) aGGGACGCCACTCCGCCGAAGGTTCTGTCGAAATATGCAATGCGCGGTTTAACATCGTTTCCAGCCAGAGAATCTCTTCCTCGCTGCTATCACGCGTAATGGTACTCTCCCCTTCCGGCGACATTTTCCACAACAGAAGATAATCAcc < 4:255597/148‑1 (MQ=255) gACGCCACTCCGCCGAAGGTTCTGTCGAAATATGCAATGCGCGGTTTAACATCGTTTCCAGCCAGAGAATCTCTTCCTCGCTGCTATCACGCGTAATGGTACTCTCCCCTTCCGGCGACATTTTCCACAACAGAAGATAATCACCCGt < 3:253341/148‑1 (MQ=255) ccACTCCGCCGAAGGTTCTGTCGAAATATGCAATGCGCGGTTTAACATCGTTTCCAGCCAGAGAATCTCTTCCTCGCTGCTATCACGCGTAATGGTACTCTCCCCTTCCGGCGACATTTTCCACAACAGAAGATAATCACCCGTCCa > 5:197596/1‑147 (MQ=255) cACTCCGCCGAAGGTTCTGTCGAAATATGCAATGCGCGGTTTAACATCGTTTCCAGCCAGAGAATCTCTTCCTCGCTGCTATCACGCGTAATGGTACTCTCCCCTTCCGGCGACATTTTCCACAACAGAAGATAATCACCCGTCCATa > 6:11658/1‑148 (MQ=255) tCCGCCGAAGGTTCTGTCGAAATATGCAATGCGCGGTTTAACATCGTTTCCAGCCAGAGAATCTCTTCCTCGCTGCTATCACGCGTAATGGTACTCTCCCCTTCCGGCGACATTTTCCACAACAGAAGATAATCACCCGTCCATAcc > 3:311838/1‑147 (MQ=255) ccgccgAAGGTTCTGTCGAAATATGCAATGCGCGGTTTAACATCGTTTCCAGCCAGAGAATCTCTTCCTCGCTGCTATCACGCGTAATGGTACTCTCCCCTTCCGGCGACATTTTCCACAACAGAAGATAATCACCCGTCCATACCGa > 6:187030/1‑148 (MQ=255) ccgccgAAGGTTCTGTCGAAATATGCAATGCGCGGTTTAACATCGTTTCCAGCCAGAGAATCTCTTCCTCGCTGCTATCACGCGTAATGGTACTCTCCACTTCAGGCGACATTTTCAACAAAATAAGATAATCACCCGTCCATACCGa > 2:65457/1‑148 (MQ=255) cgccgAAGGTTCTGTCGAAATATGCAATGCGCGGTTTAACATCGTTTCCAGCCAGAGAATCTCTTCCTCGCTGCTATCACGCGTAATGGTACTCTCCCCTTCCGGCGACATTTTCCACAACAGAAGATAATCACCCGTCCATACCg < 5:176245/146‑1 (MQ=255) cgccgAAGGTTCTGTCGAAATATGCAATGCGCGGTTTAACATCGTTTCCAGCCAGAGAATCTCTTCCTCGCTGCTATCACGCGTAATGGTACTCTCCCCTTCCGGCGACATTTTCCACAACAGAAGATAATCACCCGTCCATACCGAc < 6:197596/148‑1 (MQ=255) cgAAGGTTCTGTCGAAATATGCAATGCGCGGTTTAACATCGTTTCCAGCCAGAGAATCTCTTCCTCGCTTCTATCACGCGTAATGGTACTCTCCCCTTCCTGCGACATTTTCCACAACAGAAGATAATCACCCGTCAATACCGACTc > 5:82383/1‑147 (MQ=255) cgAAGGTTCTGTCGAAATATGCAATGCGCGGTTTAACATCGTTTCCAGCCAGAGAATCTCTTCCTCGCTGCTATCACGCGTAATGGTACTCTCCCCTTCCGGCGACATTTTCCACAACAGAAGATAATCACCCGTCCATACCGACTc > 1:305078/1‑147 (MQ=255) tCTGTCGAAATATGCAATGCGCGGTTTAACATCGTTTCCAGCCAGAGAATCTCTTCCTCGCTGCTATCACGCGTAATGGTACTCTCCCCTTCCGGCGACATTTTCCACAACAGAAGATAATCACCCGTCCATACCGACTCAAACCAtt > 1:82925/1‑148 (MQ=255) gTCGAAATATGCAATGCGCGGTTTAACATCGTTTCCAGCCAGAGAATCTCTTCCTCGCTGCTATCACGCGTAATGGTACTCTCCCCTTCCGGCGACATTTTCCACAACAGAAGATAATCACCCGTCCATACCGACTCAAACCATTTAt > 5:142526/1‑148 (MQ=255) tCGAAATATGCAATGCGCGGTTTAACATCGTTTCCATCCAGAGAATCTCTTCCTCGCTGCTATCACGCGTAATTGTACTCTCCCCTTCCTGCGACATTTTCCACAACAGAAGATAATCACCCGTCCATACCGACTCAAACCAttt < 3:195053/145‑1 (MQ=255) tCGAAATATGCAATGCGCGGTTTAACATCGTTTCCAGCCAGAGAATCTCTTCCTCGCTGCTATCACGCGTAATGGTACTCTCCCCTTCCGGCGACATTTTCCACAACAGAAGATAATCACCCGTCCATACCGACTCAAACCAttt < 1:293205/145‑1 (MQ=255) tCGAAATATGCAATGCGCGGTTTAACATCGTTTCCAGCCAGAGAATCTCTTCCTCGCTGCTATCACGCGTAATGGTACTCTCCCCTTCCGGCGACATTTTCCACAACAGAAGATAATCACCCGTCCATACCGACTCAAACCATTTAt < 1:289333/147‑1 (MQ=255) gAAATATGCAATGCGCGGTTTAACATCGTTTCCAGCCAGAGAATCTCTTCCTCGCTGCTATCACGCGTAATGGTACTCTCCCCTTCCGGCGACATTTTCCACAACAGAAGATAATCACCCGTCCATACCGACTCAAACCATTTAtgtg < 3:351352/148‑1 (MQ=255) aaTATGCAATGCGCGGTTTAACATCGTTTCCAGCCAGAGAATCTCTTCCTCGCTGCTATCACGCGTAATGGTACTCTCCCCTTCCGGCGACATTTTCCACAACAGAATATAATCACCCGTCCATACCGACTCAAACCATTTATGTGTc < 2:83531/148‑1 (MQ=255) aaTATGCAATGCGCGGTTTAACATCGTTTCCAGCCAGAGAATCTCTTCCTCGCTGCTATCACGCGTAATGGTACTCTCCCCTTCCGGCGACATTTTCCACAACAGAAGATAATCACCCGTCCATACCGACTCAAACCATTTATGTGTc < 5:6681/148‑1 (MQ=255) aTGCGCGGTTTAACATCGTTTCCAGCCAGAGAATCTCTTCCTCGCTGCTATCACGCGTAATGGTACTCTCCCCTTCCGGCGACATTTTCCACAACAGAAGATAATCACCCGTCCATACCGACTCAAACCATTTATGTGTCAGCGTCCa < 2:210453/148‑1 (MQ=255) aTGCGCGGTTTAACATCGTTTCCAGCCAGAGAATCTCTTCCTCGCTGCTATCACGCGTAATGGTACTCTCCCCTTCCGGCGACATTTTCCACAACAGAAGATAATCACCCGTCCATACCGACTCAAACCATTTATGTGTCAGCGTCCa > 7:224263/1‑148 (MQ=255) tGCGCGGTTTTACATCGTTTCCAGCCAGATAATCTCTTCCTCGCTGCTATCACGAGTAATGGTACTCTCACCTTCCGGCGACATTTTCCACAACAGAAGATAATCACCCGTCCATACCGACTCAAACCATTTATGTGTCAGCGTCCAc < 8:357120/148‑1 (MQ=255) gcgcGGTTTAATATCGTTTCCAGCCAGAGAATCTCTTCCTCGCTGCTATCACGCGTAATGGTACTCTCCCCTTCCGGCGACATTTTCCACAACAGAAGATAATCACCCGTcc > 1:54697/1‑112 (MQ=255) gcgcGGTTTAATATCGTTTCCAGCCAGAGAATCTCTTCCTCGCTGCTATCACGCGTAATGGTACTCTCCCCTTCCGGCGACATTTTCCACAACAGAAGATAATCACCCGTcc < 2:54697/112‑1 (MQ=255) cgGTTTAACATCGTTTCCAGCCAGAGAATCTCTTCCTCGCTGCTATCACGCGTAATGGTACTCTCCCCTTCCGGCGACATTTTCCACAACAGAAGATAATCACCCGTCCATACCGACTCAAACCATTTATGTGTCAGCGTCCACGttt > 3:45219/1‑148 (MQ=255) cgGTTTAACATCGTTTCCAGCCAGAGAATCTCTTCCTCGCTGCTATCACGCGTAATGGTACTCTCCCCTTCCGGCGACATTTTCCACAACAGAAGATAATCACCCGTCCATACCGACTCAAACCATTTATGTGTCAGCGTCCACGttt < 8:224263/148‑1 (MQ=255) ggTTTAACATCGTTTCCAGCCAGAGAATCTCTTCCTCGCTGCTATCACGCGTAATGGTACTCTCACCTTCCGGCGACATTTTCCACAACAGAAGATAATCACCCGTCCATACCGACTCAAACCATTTATGTGTCAGCGTCCACGTTTg < 5:239521/148‑1 (MQ=255) gTTTAACATCGTTTCCAGCCAGAGAATCTCTTCCTCGCTGCTATCACGAGTAATGGTACTCTCCCCTTCCGGCGACATTTTCCACAACAGAAGATAATCACCCGTCCATACCGACTCAAACCATTTATGTGTCCGCGTCCACGTTTGc > 3:64600/1‑148 (MQ=255) aaCATCGTTTCCAGCCAGAGAATCTCTTCCTCGCTGCTATCACGCGTAATGGTACTCTCCCCTTCCGGCGACATTTTCCACAACAGAAGATAATCACCCGTCCATACCGACTCAAACCATTTATGTGTCAGCGTCCACGTTTGCTGa < 5:11658/147‑1 (MQ=255) cGTTTCCAGCCAGAGAATCTCTTCCTCGCTGCTATCACGCGTAATGGTACTCTCCCCTTCCGGCGACATTTTCCACAACAGAAGATAATCACCCGTCCATACCGACTCAAACCATTTATGTGTCAGCGTCCACGTTTGCTGACCTAc > 5:126452/1‑147 (MQ=255) cGTTTCCAGCCAGAGAATCTCTTCCTCGCTGCTATCACGCGTAATGGTACTCTCCCCTCCCGGCGACATTTTCCACAACAGAAGATAATCACCCGTCCATACCGACTCAAACCATTTATGTGTCAGCGTCCACGTTTGCTGACCTAc > 5:244192/1‑147 (MQ=255) cGTNTCCAGCCAGAGAATCTCTTCCTCGCTGCTATCACGCGTAATGGTACTCTCCCCTCCCGGCGACATTTTCCACAACAGAAGATAATCACCCGTCCATACCGACTCAAACCATTTATGTGTCAGCGTCCACGTTTGCTGACCTAc > 5:249855/1‑147 (MQ=255) gtatCCATCAAGATAATCTCTTACTCGATGATATTAAGAGTAATGGTAATCTCCACTTACTGCGACATTTTCCACAACATAATATAATAACCAGTCCATACCGACTCAAACCATTTATGTGTCAGCGTCCACGTTTGCTGACCTACg < 1:317840/144‑1 (MQ=255) gTTTCCAGCCAGAGAATCTCTTCCTCGCTGCTATCACGCGTAATGGTACTCTCCCCTTCCGGCGACATTTTCCACAACAGAAGATAATCACCCGTCCATACCGACTCAAACCATTTATGTGTCAGCGTCCACGTTTGCTGACCTACg < 3:236047/147‑1 (MQ=255) cagccagAGAATCTCTTCCTCGCTGCTATCACGCGTAATGGTACTCTCCCCTTCCGGCGACATTTTCCACAACAGAAGATAATCACCCGTCCATACCGACTCAAACCATTTATGTGTCAGCGTCCACGTTTGCTGACCTACGAGGACa < 8:281302/148‑1 (MQ=255) ccagAGAATCTCTTCCTCGCTGCTATCACGCGTAATGGTACTCTCCCCTTCCGGCGACATTTTCCACAACAGAAGATAATCACCCGTCCATACCGACTCAAACCATTTATGTGTCAGCGTCCACGTTTGCTGACCTACGAGGACATCa < 4:208157/148‑1 (MQ=255) ccagAGAATCTCTTCCTCGCTGCTATCACGCGTAATGGTACTCTCCCCTCCCGGCGACATTTTCCACAACAGAAGATAATCACCCGTCCATACCGACTCAAACCATTTATGTGTCAGCGTCCACGTTTGCTGACCTACGAGGACATCa < 6:244192/148‑1 (MQ=255) ccagAGAATCTCTTCCTCGCTGCTATCACGCGTAATGGTACTCTCCCCTCCCGGCGACATTTTCCACAACAGAAGATAATCACCCGTCCATACCGACTCAAACCATTTATGTGTCAGCGTCCACGTTTGCTGACCTACGAGGACATCa < 6:249855/148‑1 (MQ=255) gagaATCTCTTCCTCGCTGCTATCACGCGTAATGGTACTCTCCCCTTCCGGCGACATTTTCCACAACAGAAGATAATCACCCGTCCATACCGACTCAAACCATTTATGTGTCAGCGTCCACGTTTGCTGACCTACGAGGACATCAACg < 6:325370/148‑1 (MQ=255) taaTCTCTTCCTCGATGCTATCACGCGTAATGGTACTCTCCCCTTCCGGCGACATTTTCCACAACAGAAGATAATCACCCGTCCATACCGACTCAAACCATTTATGTGTCAGCGTCCACGTTTGCTGACCTACGAGGACATCAACGCt < 1:65457/147‑1 (MQ=255) ttCCTCGCTGCTATCACGCGTAATGGTACTCTCCCCTTCCGGCGACATTTTCCACAACAGAAGATAATCACCCGTCCATACCGACTCAAACCATTTATGTGTCAGCGTCCACGTTTGCTGACCTACGAGGACATCAACGCTAGc < 5:187030/144‑1 (MQ=255) tCCTCGCTGCTATCACGCGTAATGGTACTCTCCCCTTCCGGCGACATTTTCCACAACAGAAGATAATCACCCGTCCATACCGACTCAAACCATTTATGTGTCAGCGTCCACGTTTGCTGACCTACGAGGACATCAACGCTAGCCTCAc > 8:239472/1‑148 (MQ=255) cTCGCTGCTATCACGCGTAATGGTACTCTCCCCTTCCGGCGACATTTTCCACAACAGAAGATAATCACCCGTACATACCGACTCAAACCATTTATGTGTCAGCGTCCACGTTTGCTGACCTACGAGGACATCAACGCTAGCCTCACCg > 8:140569/1‑148 (MQ=255) ctATCACGCGTAATGGTACTCTCCCCTTCCGGCGACATTTTCCACAACAGAAGATAATCACCCGTCCATACCGACTCAAACCATTTATGTGTCAGCGTCCACGTTTGCTGACCTACGAGGACATCAACGCTAGCCTCACCGAcgcg < 8:238818/146‑1 (MQ=255) ctATCACGCGTAATGGAACTCTCCCCTTCCGGCGACATTTTCCACACCAGAAGATAATCACCCGTACATACCGACTCAAACCATTTATGTGTCAGCGTCCACGTTTGCTGACCTACGAGGACATCAACGCTAGCCTCACCGACGCGa < 2:89804/147‑1 (MQ=255) cACGCGTAATGGTACTCTCCCCTTCCGGCGACATTTTCCACAACAGAAGATAATCACCCGTCCATACCGACTCAAACCATTTATGTGTCAGCGTCCACGTTTGCTGACCTa < 1:292600/111‑1 (MQ=255) cACGCGTAATGGTACTCTCCCCTTCCGGCGACATTTTCCACAACAGAAGATAATCACCCGTCCATACCGACTCAAACCATTTATGTGTCAGCGTCCACGTTTGCTGACCTa > 2:292600/1‑111 (MQ=255) aaTGGTACTCTCCCCTTCCGGCGACATTTTCCACAACAGAAGATAATCACCCGTCCATACCGACTCAAACCATTTATGTGTCAGCGTCCACGTTTGCTGACCTACGAGGACATCAACGCTAGCCTCACCGACGCGa > 1:233643/1‑136 (MQ=255) aaTGGTACTCTCCCCTTCCGGCGACATTTTCCACAACAGAAGATAATCACCCGTCCATACCGACTCAAACCATTTATGTGTCAGCGTCCACGTTTGCTGACCTACGAGGACATCAACGCTAGCCTCACCGACGCGa < 2:233643/136‑1 (MQ=255) aaTGGTACTCTCCCCTTCCGGCGACATTTTCCACAACAGAAGATAATCACCCGTCCATACCGACTCAAACCATTTATGTGTCAGCGTCCACGTTTGCTGACCTACGAGGACATCAACGCTAGCCTCACCGACGCGAACGACCacaa > 1:13887/1‑146 (MQ=255) aTGGTACTCTCCCCTTCCGGCGACATTTTCCACAACAGAAGATAATCACCCGTCAATACCGACTCAAACCATTTATGTGTCAGCGTCCACGTTTGCTGACCTACTAGGACATAAACGCTAGCATCACCGACGCGAACGACCacaac > 4:6406/1‑146 (MQ=255) ggTACTCTCCCCTTCCGGCGACATTTTCCACAACAGAAGATAATCACCCGTCCATACCGACTCAAACCATTTATGTGTCAGCGTCCACGTTTGCTGACCTACGAGGACATCAACGCTAGCCTCACCGACGCGAACGACCACAACAgg > 8:167064/1‑147 (MQ=255) tACTCTCCCCTTCCGGCGACATTTTCCACAACAGAAGATAATCACCCGTCCATACCGACTCAAACCATTTATGTGTCAGCGTCCACGTTTGCTGACCTACGAGGACATCAACGCTAGCCTCACCGACGCGAACGACCACAACAGGCaa < 7:167064/148‑1 (MQ=255) aCTCTCCCCTTCCGGCGACATTTTCCACAACAGAAGATAATCACCCGTCCATACCGACTCAAACCATTTATGTGTCAGCGTCCACGTTTGCTGACCTACGAGGACATCAACGCTAGCCTCACCGACGCGAACGACCACAACAGGCAAt > 1:335991/1‑148 (MQ=255) ctctCCCCTTCCGGCGACATTTTCCACAACATAAGATAATCACCCGTCCATACCGACTCAAACCATTTATGTGTCAGCGTCCACGTTTGCTGACCTACGAGGACATCAACGCTAGCCTCACCGACGCGAACGACCACAACAGGCAAt < 2:49342/147‑1 (MQ=255) ctcCCCTTCCGGCGACATTTTCCACAACAGAAGATAATCACCCGTCCATACCGACTCAAACCATTTATGTGTCAGCGTCCACGTTTGCTGACCTACGAGGACATCAACGCTAGCCTCACCGACGCGAACGACCACAACAGGCAAtttt > 3:167275/1‑148 (MQ=255) ctcCCCTTCCGGCGACATTTTCCACAACAGAAGATAATCACCCGTCCATACCGACTCAAACCATTTATGTGTCAGCGTCCACGTTTGCTGACCTACGAGGACATCAACGCTAGCCTCACCGACGCGAACGACCACAACAGGCAAtttt > 1:311648/1‑148 (MQ=255) tcCCCTTCCGGCGACATTTTCCACAACAGAAGATAATCACCCGTCCATACCGACTCAAACCATTTATGTGTCAGCGTCCACGTTTGCTGACCTACGAGGACATCAACGCTAGCCTCACCGACGCGAACGACCACAACAGGCAAttt < 2:305078/146‑1 (MQ=255) ccccTTCCGGCGACATTTTCCACAACAGAAGATAATCACCCGTCCATACCGACTCAAACCATTTAtg > 5:305988/1‑67 (MQ=255) ccccTTCCGGCGACATTTTCCACAACAGAAGATAATCACCCGTCCATACCGACTCAAACCATTTAtg < 6:305988/67‑1 (MQ=255) cccTTCCGGCGACATTTTCCACAACAGAAGATAATCACCCGTCCATACCGACTCAAACCATTTATGTGTCAGCGTCCACGTTTGCTGACCTACGAGGACATCAACGCTAGCCTCACCGACGCGAACGACCACAACAGGCAAttttt < 3:315180/146‑1 (MQ=255) cccTTCCGGCGACATTTTCCACAACAGAAGATAATCACACGTCCATACCGACTCAAACCATTTATGTGTCAGCGTCCACGTTTGCTGACCTACGAGGACATCAACGCTAGCCTCACCGACGCGAACGACCACAACAGGCAAtttt < 2:82925/145‑1 (MQ=255) cTTCCGGCGACATTTTCCACAACAGAAGATAATCACCCGTCCATACCGACTCAAACCATTTATGTGTCAGCGTCCACGTTTGCTGACCTACGAGGACATCAACGCTAGCCTCACCGACGCGAACGACCACAACAGGCAATTTTTTGTc > 8:1973/1‑148 (MQ=255) tCCGGCGACATTTTCCACAACAGAAGATAATCACCCGTCCATACCGACTCAAACCATTTATGTGTCAGCGTCCACGTTTGCTGACCTACGAGGACATCaa < 3:184225/100‑1 (MQ=255) tCCGGCGACATTTTCCACAACAGAAGATAATCACCCGTCCATACCGACTCAAACCATTTATGTGTCAGCGTCCACGTTTGCTGACCTACGAGGACATCaa > 4:184225/1‑100 (MQ=255) | TTGAAATTGCTTTATTTTTTCTACCAACAAGGGACGCCACTCCGCCGAAGGTTCTGTCGAAATATGCAATGCGCGGTTTAACATCGTTTCCAGCCAGAGAATCTCTTCCTCGCTGCTATCACGCGTAATGGTACTCTCCCCTTCCGGCGACATTTTCCACAACAGAAGATAATCACCCGTCCATACCGACTCAAACCATTTATGTGTCAGCGTCCACGTTTGCTGACCTACGAGGACATCAACGCTAGCCTCACCGACGCGAACGACCACAACAGGCAATTTTTTGTC > NC_000913/3454067‑3454354 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |