Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 1,979,486 IS5 (+) +4 bp intergenic (‑271/‑264) insA ← / → uspC IS1 repressor TnpA/universal stress protein

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 1979486 =0 (0.000)47 (1.290) 27/240 0.4 100% intergenic (‑271/‑267) insA/uspC IS1 repressor TnpA/universal stress protein
?NC_000913 2101749 = NA (NA)noncoding (1195/1195 nt) IS5 repeat region
* ? NC_000913 = 19794890 (0.000)55 (1.510) 31/240 0.3 100% intergenic (‑274/‑264) insA/uspC IS1 repressor TnpA/universal stress protein
?NC_000913 = 2290113 NA (NA)noncoding (1/1195 nt) IS5 repeat region

AAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGAAATTATATGATCACCGGGAGTGATTGATTAATTAT  >  NC_000913/1979342‑1979637
                                                                                                                                                   |                                                                                                                                                    
actggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAt                                                                                                                                                     >  7:51716‑M1/145‑149 (MQ=255)
actggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAt                                                                                                                                                     <  6:90250‑M1/5‑1 (MQ=255)
actggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAt                                                                                                                                                     >  1:193811‑M1/145‑149 (MQ=255)
 ctggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAtt                                                                                                                                                    >  1:131908‑M1/144‑149 (MQ=255)
 ctggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAtt                                                                                                                                                    >  8:38919‑M1/144‑149 (MQ=255)
 aGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAgg                                                                                                                                                    <  8:85937‑M1/149‑3 (MQ=255)
     aaaaTGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaagg                                                                                                                                                <  2:15676‑M1/149‑7 (MQ=255)
         aacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACa                                                                                                                                             <  6:70292‑M1/13‑1 (MQ=255)
            gccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACaaag                                                                                                                                          <  4:73373‑M1/16‑1 (MQ=255)
               aGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaag                                                                                                                                      >  1:105268‑M1/1‑133 (MQ=255)
                ggAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagt                                                                                                                                     <  2:105268‑M1/149‑18 (MQ=255)
                        gaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAAt                                                                                                                              <  6:98684‑M1/28‑1 (MQ=255)
                        gaagaaacggtctaaataggctgattcaaggaatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGTCAACAAt                                                                                                                              <  5:81522‑M1/28‑1 (MQ=255)
                            aaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACt                                                                                                                         <  6:38851‑M1/33‑1 (MQ=255)
                                 ggctaaataggctgattcaaggcatttacgggataaaaaatcgcctcaaacatgaagaaatgaaatgactgaggcagccgagaagaatttcccctcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACttaatg                                                                                                                    >  6:81522‑M1/112‑149 (MQ=255)
                                      aataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACttaatgttaat                                                                                                               <  8:83195‑M1/43‑1 (MQ=255)
                                      aataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACttaatgttaat                                                                                                               >  3:73373‑M1/107‑149 (MQ=255)
                                      aataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACttaatgttaat                                                                                                               >  6:159029‑M1/107‑149 (MQ=255)
                                         aggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGcaac                                                                                                                                 >  1:192159‑M1/104‑128 (MQ=255)
                                         aggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGcaac                                                                                                                                 <  2:192159‑M1/25‑1 (MQ=255)
                                           gctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAAc                                                                                                                          >  1:27870‑M1/102‑133 (MQ=255)
                                           gctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAAc                                                                                                                          <  2:27870‑M1/32‑1 (MQ=255)
                                              tCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatat                                                                                                                            <  1:102857‑M1/128‑27 (MQ=255)
                                              tCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatat                                                                                                                            >  2:102857‑M1/1‑102 (MQ=255)
                                                 tcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACttaatgttaa                                                                                                                <  1:47195‑M1/42‑1 (MQ=255)
                                                 tcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACttaatgttaa                                                                                                                >  2:47195‑M1/96‑137 (MQ=255)
                                                  caaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTa                                                                                                    >  7:83195‑M1/95‑148 (MQ=255)
                                                   aTAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagcca                                                                                                  <  6:76224‑M1/149‑53 (MQ=255)
                                                         tttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATAtt                                                                                            >  5:98684‑M1/88‑149 (MQ=255)
                                                             cgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAAc                                                                                         >  5:38851‑M1/84‑148 (MQ=255)
                                                                 agaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACaa                                                                                                                                            >  6:95152‑M1/80‑93 (MQ=255)
                                                                   aatCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcat                                                                                   >  1:63696‑M1/1‑81 (MQ=255)
                                                                    aaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGtt                                                                                 >  5:70292‑M1/77‑149 (MQ=255)
                                                                       atcTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatga                                                                              <  2:63696‑M1/149‑73 (MQ=255)
                                                                        atcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGtt                                                                                 <  3:43577‑M1/73‑1 (MQ=255)
                                                                        atcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGtt                                                                                 >  4:43577‑M1/73‑145 (MQ=255)
                                                                           gCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtcc                                                                                                                                   <  2:65207‑M1/92‑20 (MQ=255)
                                                                           gCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtcc                                                                                                                                   >  1:65207‑M1/1‑73 (MQ=255)
                                                                            gctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCAAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGtt                                                                                                       >  8:69064‑M1/69‑119 (MQ=255)
                                                                            gctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCAAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGtt                                                                                                       <  7:69064‑M1/51‑1 (MQ=255)
                                                                                          tttCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacaggg                                                                                        <  8:30159‑M1/120‑63 (MQ=255)
                                                                                          tttCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacaggg                                                                                        >  7:30159‑M1/1‑58 (MQ=255)
                                                                                                aatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACaaagaaag                                                                                                                                      >  6:74349‑M1/49‑68 (MQ=255)
                                                                                                aatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACaaagaaag                                                                                                                                      <  5:74349‑M1/20‑1 (MQ=255)
                                                                                                   aTACCAGATAAGCTTTTTTTAAACAGACACTTTCCGCTCTTCAAACTTAgttaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgtgtcatcaacttaccttcgccgacagt                                                    <  2:189106‑M1/147‑99 (MQ=255)
                                                                                                   aTACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggacccatagaacagggatcatcatgagtcaacaacttaccttcgccgacagt                                                    >  1:189106‑M1/1‑49 (MQ=255)
                                                                                                      ccAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatga                                                                                                                          <  1:36457‑M1/74‑29 (MQ=255)
                                                                                                      ccAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatga                                                                                                                          >  2:36457‑M1/1‑46 (MQ=255)
                                                                                                        aGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaag                                                                                                                                      <  1:22262‑M1/60‑17 (MQ=255)
                                                                                                        aGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaag                                                                                                                                      >  2:22262‑M1/1‑44 (MQ=255)
                                                                                                         gtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGt                                                                                  <  4:157343‑M1/72‑1 (MQ=255)
                                                                                                         gtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGt                                                                                  >  3:157343‑M1/40‑111 (MQ=255)
                                                                                                         gATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcag                                            >  4:91488‑M1/1‑43 (MQ=255)
                                                                                                                 aTTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgttt                                                                                                                >  4:112047‑M1/1‑35 (MQ=255)
                                                                                                                 aTTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgttt                                                                                                                <  3:112047‑M1/73‑39 (MQ=255)
                                                                                                                      aatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGAAATta                                <  3:46745‑M1/122‑1 (MQ=255)
                                                                                                                       aaaCAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgt                               >  7:70261‑M1/1‑29 (MQ=255)
                                                                                                                         aCAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttc                                                                                     <  4:121328‑M1/92‑66 (MQ=255)
                                                                                                                         aCAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttc                                                                                     >  3:121328‑M1/1‑27 (MQ=255)
                                                                                                                         aCAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagg                                                                                         >  2:14609‑M1/1‑27 (MQ=255)
                                                                                                                         aCAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagg                                                                                         <  1:14609‑M1/88‑62 (MQ=255)
                                                                                                                          tccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAAc                                                                                         <  6:99086‑M1/65‑1 (MQ=255)
                                                                                                                          tccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAAc                                                                                         >  5:99086‑M1/23‑87 (MQ=255)
                                                                                                                           aGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaa                                                                      <  4:145188‑M1/105‑81 (MQ=255)
                                                                                                                               acTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccag                       >  8:120273‑M1/1‑21 (MQ=255)
                                                                                                                                     cGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagag                <  7:120273‑M1/149‑135 (MQ=255)
                                                                                                                                          aacaaACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggt                                                                                       >  1:3758‑M1/1‑10 (MQ=255)
                                                                                                                                          aacaaACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggt                                                                                       <  2:3758‑M1/73‑64 (MQ=255)
                                                                                                                                               aCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgt      >  6:34916‑M1/1‑5 (MQ=255)
                                                                                                                                               aCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttc          >  8:3434‑M1/1‑5 (MQ=255)
                                                                                                                                               aCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttc          <  7:3434‑M1/145‑141 (MQ=255)
                                                                                                                                               aCTAAggaaggcgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatag                                                                                               <  3:142670‑M1/60‑56 (MQ=255)
                                                                                                                                               aCTAAggaaggcgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatag                                                                                               >  4:142670‑M1/1‑5 (MQ=255)
                                                                                                                                                cTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtc     <  8:70261‑M1/149‑146 (MQ=255)
                                                                                                                                                cTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtc     <  4:18761‑M1/149‑146 (MQ=255)
                                                                                                                                                cTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtc     >  5:91374‑M1/1‑4 (MQ=255)
                                                                                                                                                cTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctgga                                                                                                      >  4:48148‑M1/1‑4 (MQ=255)
                                                                                                                                                cTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctgga                                                                                                      <  3:48148‑M1/52‑49 (MQ=255)
                                                                                                                                                 tAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcc    >  6:93358‑M1/1‑3 (MQ=255)
                                                                                                                                                 tAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagca                                          >  7:116118‑M1/1‑3 (MQ=255)
                                                                                                                                                 tAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagca                                          <  8:116118‑M1/111‑109 (MQ=255)
                                                                                                                                                 tAAggaaggtgcgaacaagtccctgatatgagatcatgtttg                                                                                                               >  1:92759‑M1/1‑3 (MQ=255)
                                                                                                                                                 tAAggaaggtgcgaacaagtccctgatatgagatcatgtttg                                                                                                               <  2:92759‑M1/42‑40 (MQ=255)
                                                                                                                                                 tAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACat                                                                                                 <  2:195764/56‑1 (MQ=255)
                                                                                                                                                 tAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGAAATTATATGATCACCGGGAGTGATTGattaat     >  2:58732/1‑148 (MQ=255)
                                                                                                                                                  aaggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgaca                                                      >  7:32514‑M1/1‑2 (MQ=255)
                                                                                                                                                  aaggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgaca                                                      <  8:32514‑M1/98‑97 (MQ=255)
                                                                                                                                                  aaggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagt                                                                            <  6:130679‑M1/76‑75 (MQ=255)
                                                                                                                                                  aaggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagt                                                                            >  5:130679‑M1/1‑2 (MQ=255)
                                                                                                                                                   aggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccg  >  5:101760‑M1/1‑1 (MQ=255)
                                                                                                                                                   aggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccg  >  5:64542‑M1/1‑1 (MQ=255)
                                                                                                                                                   aggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccg  >  1:189766‑M1/1‑1 (MQ=255)
                                                                                                                                                   aggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccg  >  1:84803‑M1/1‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                                    
AAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGAAATTATATGATCACCGGGAGTGATTGATTAATTAT  >  NC_000913/1979342‑1979637

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.