BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,683,585	G→A	intergenic (‑138/+45)	dctA ← / ← yhjK	C4‑dicarboxylic acid, orotate and citrate transporter/cyclic‑di‑GMP phosphodiesterase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,683,585	0	G	A	100.0%	458.7 / NA	136	intergenic (‑138/+45)	dctA/yhjK	C4‑dicarboxylic acid, orotate and citrate transporter/cyclic‑di‑GMP phosphodiesterase
Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (68/68); total (68/68)

Only 100 of 136 total aligned reads displayed.

CATAGGGTGTCCTTTAGTAAAACCACAGGTCTTGTAAGGTTATGGGGTACCTGCGGCCTTAAAATAACACCCAGACAACATCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCGCACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTAACTCTCTTCGAAGATTTCAATAGGGAGTGGGCGAGCAAAAAGGAAGCCCTGGGCAATACCAACGCCCGCTTTTGCCAG  >  NC_000913/3683445‑3683725

cATAGGGTGTCCTTTAGTAAAACCACAGGTCTTGTAAGGTTATGGGTTACATGCGGCCTTAAAATAACACCCAGACAACATCCCAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCACACAAAc                                                                                                                                       >  2:127103/1‑148 (MQ=255)

 aTAGGGTGTCCTTTAGTAAAACCACAGGTCTTGTAAGGTTATGGGGTACCTGCGGCCTTAAAATAACACCCAGACAACATCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCACACAAACCa                                                                                                                                     <  3:165351/149‑1 (MQ=255)

     ggTGTCCTTTAGTAAAACCACAGGTCTTGTAAGGTTATGGGGTACCTGCGGCCTTAAAATAACACCCAGACAACATCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCACACAAACCAGCAc                                                                                                                                 >  8:209313/1‑149 (MQ=255)

         tCCTTTAGTAAAACCACAGGTCTTGTAAGGTTATGGGGTACCTGCGGCCTTAAAATAACACCCAGACAACATCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCACACAAACCAGCACtttt                                                                                                                             <  8:115331/149‑1 (MQ=255)

         tCCTTTAGTAAAACCACAGGTCTTGTAAGGTTATGGGGTACCTGCGGCCTTAAAATAACACCCAGACAACATCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCACACAAACCAGCACtttt                                                                                                                             <  2:371444/149‑1 (MQ=255)

         tCCTTTAGTAAAACCACAGGTCTTGTAAGGTTATGGGGTACCTGCGGCCTTAAAACAACACCCAGACAACATCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCACACAAACCAGAACtttt                                                                                                                             >  3:327589/1‑149 (MQ=255)

          ccTTTAGTAAAACCACAGGTCTTGTAAGGTTATGGGGTACCTGCGGCCTTAAAATAACACCCAGACAACATCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCACACACAAACCAGCACtttt                                                                                                                             >  4:112639/1‑148 (MQ=255)

           cTTTAGTAAAACCACAGGTCTTGTAAGGTTATGGGGTACCTGCGGCCTTAAAATAACACCCAGACAACATCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCACACAAACCAGCACttttt                                                                                                                            >  1:6538/1‑148 (MQ=255)

            tttAGTAAAACCACAGGTCTTGTAAGGTTATGGGGTACCTGCGGCCTTAAAATAACACCCAGACAACATCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCACACAAACCAGCACTTTTTa                                                                                                                           >  3:204645/1‑148 (MQ=255)

              tAGTAAATCCACAGGTCTTGTAAGGTTATGGGGTACCTGCTTCCTTAAAATAACACCCTGACAACATCACAGAAATTTACCTTTATCATAATTGAAAAAAAAAGGTTAAAAAGTTTGAGCTGGCTCACACAAACCAGCACTTTTTaaa                                                                                                                         <  4:38142/148‑1 (MQ=255)

                 tAAAACCACAGGTCTTGTAAGGTTATGGGGTACCTGCGGCCTTAAAATAACACCCAGACAACATCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGATCTGGCTCACACAAACCAGCACTTTTTAAAGttt                                                                                                                     <  7:264209/149‑1 (MQ=255)

                 tAAAACCACAGGTCTTGTAAGGTTATGGGGTACCTGCGGCCTTAAAATAACACCCAGACAACATCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCACACAAACCAGCACTTTTTAAAGttt                                                                                                                     >  3:275736/1‑149 (MQ=255)

                 tAAAACCACAGGTCTTGTAAGGTTATGGGGTACCTGCGGCCTTAAAATAACACCCAGACAACATCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCACACAAACCAGCACTTTTTAAAGttt                                                                                                                     >  7:136080/1‑149 (MQ=255)

                    aaCCACAGGTCTTGTAAGGTTATGGGGTACCTGCGGCCTTAAAATAACACCCAGACAACATCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCACACAAACCAGCACTTTTTAAAGTTTTGt                                                                                                                  <  7:29481/149‑1 (MQ=255)

                       cacaGGTCTTGTAAGGTTATGGGGTACCTGCGGCCTTAAAATAACACCCAGACAACATCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCACACAAACCAGCACTTTTTAAAGTTTTGTAAt                                                                                                               <  5:125772/149‑1 (MQ=255)

                         caGGTCTTGTAAGGTTATGGGGTACCTGCGGCCTTAAAATAACACCCAGACAACATCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCACACAAACCAGCACTTTTTAAAGTTTTGTAAt                                                                                                               >  3:198812/1‑147 (MQ=255)

                          aGGTCTTGTAAGGTTATGGGGTACCTGCGGCCTTAAAATAACACCCAGACAACATCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCACACAAACCAGCACTTTTTAAAGTTTTGTAATCAg                                                                                                            >  2:226571/1‑149 (MQ=255)

                            gTCTTGTAAGGTTATGGGGTACCTGCGGCCTTAAAATAACACCCAGACAACATCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCACACAAACCAGCACTTTTTAAAGTTTTGTAATCAGtt                                                                                                          >  7:208305/1‑149 (MQ=255)

                            gTCTTGTAAGGTTATGGGGTACCTGCGGCCTTAAAATAACACCCAGACAACATCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCACACAAACCAGCACTTTTTAAAGTTTTGTAATCAGtt                                                                                                          >  8:59971/1‑149 (MQ=255)

                               ttGTAAGGTTATGGGGTACCTGCGGCCTTAAAATAACACCCAGACAACATCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCACACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTgg                                                                                                       >  1:233242/1‑149 (MQ=255)

                                tGTAAGGTTATGGGGTACCTGCGGCCTTAAAATAACACCCAGACAACATCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCACACCAACCAGCACTTTTTAAAGATTTGTAATCACTTTggg                                                                                                      >  1:12035/1‑149 (MQ=255)

                                  tAAGGTTATGGGGTACCTGCGGCCTTAAAATACCACCCAGACAACATCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTTAAAAGTTTGAGCTGGCTCACACAAACCAGCACTTTTTAAAGTTTTGTAATAAGTTTgggg                                                                                                     >  1:112936/1‑148 (MQ=255)

                                  tAAGGTTATGGGGTACCTGCGGCCTTAAAATAACACCCAGACAACATCACGGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCACACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTgggg                                                                                                     >  8:50432/1‑148 (MQ=255)

                                  tAAGGTTATGGGGTACCTGCGGCCTTAAAATAACACCCAGACAACATCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCACACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGt                                                                                                    <  8:284438/149‑1 (MQ=255)

                                   aaGGTTATGGGGTACCTGCGGCCTTAAAATAACACCCAGACAACATCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCACACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTgggg                                                                                                     >  8:287285/1‑147 (MQ=255)

                                    aGGTTATGGGGTACCTGCGGCCTTAAAATAACACCCAGACAACATCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCACACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTa                                                                                                   <  4:305549/148‑1 (MQ=255)

                                      gTTATGGGGTACCTGCGGCCTTAAAATAACACCCAGTCAACATCACAGAAATGTACCTGGATCATAATTGAAACAAAAATGTTAAAAAGTTTGAGCTGGCTCACACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCt                                                                                                <  3:337126/149‑1 (MQ=255)

                                               tACCTGCGGCCTTAAAATAACACCCAGACAACATCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCACACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTttctt                                                                                       <  2:233242/149‑1 (MQ=255)

                                                 ccTGCGGCCTTAAAATAACACCCAGACAACATCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCACACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTcc                                                                                     <  5:207441/149‑1 (MQ=255)

                                                 ccTGCGGCCTTAAAATAACACCCAGACAACATCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCACACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTcc                                                                                     <  8:208305/149‑1 (MQ=255)

                                                  cTGCGGCCTTAAAATAACACCCAGACAACATCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCACACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCa                                                                                    <  8:86248/149‑1 (MQ=255)

                                                     cGGCCTTAAAATAACACCCAGACAACATCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCACACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGTGTAGCTACTTTTCTTCCAg                                                                                   <  8:354741/147‑1 (MQ=255)

                                                     cGGCCTTAAAATAACACCCAGACAACATCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCACACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGTTACTTTTCTTCCAg                                                                                   <  4:169971/147‑1 (MQ=255)

                                                     cGGCCTTAAAATAACACCCAGACAACATCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCACACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGt                                                                                 <  7:209313/149‑1 (MQ=255)

                                                       gCCTTAAAATAACTCCCAGACAACTTCACAGAAATGTACCTGGATCATAATTGAAACAAAATGGTTAAAAAGTTTGAGCTGGCTCACACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTaa                                                                               <  4:220062/149‑1 (MQ=255)

                                                         cTTAAAATAACACCCAGACAACATCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCACACAAACCAGCACTTTTTAAAGtttt                                                                                                                    <  3:40583/110‑1 (MQ=255)

                                                         cTTAAAATAACACCCAGACAACATCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCACACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTAAct                                                                             >  3:334975/1‑149 (MQ=255)

                                                          ttAAAATAACACCCAGACAACATCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCACACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTttct                                                                                        >  8:25396/1‑137 (MQ=255)

                                                          ttAAAATAACACCCAGACAACATCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCACACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTttct                                                                                        <  7:25396/137‑1 (MQ=255)

                                                          ttAAAATAACACCCAGACAACATCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCACACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTAActc                                                                            >  6:228345/1‑149 (MQ=255)

                                                           tAAAATAACACCCAGACAACATCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCACACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTAActct                                                                           >  2:316073/1‑149 (MQ=255)

                                                           aaaaaTCACACCCAGACAACATCACAGAAATGTACCTGCATCATAATTGAAACAAAAAGGTGAAAAAGTTTGAGCTGGCGCACACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTAActct                                                                           <  1:346291/148‑1 (MQ=255)

                                                              aaTAACACCCAGACAACATCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCACACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTAACTCTCtt                                                                        <  8:271124/149‑1 (MQ=255)

                                                              aaTAACACCCAGACAACATCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCACACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTGTGGGGGAGCTACTTTTCTTCCAGGTAACTCTCtt                                                                        >  8:126465/1‑149 (MQ=255)

                                                                     cccAGACAACATCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCACACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTAACTCTCTTCGAAGAt                                                                 <  7:59971/149‑1 (MQ=255)

                                                                      ccAGACAACATCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCACACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTAACTCTCTTCGAAGAtt                                                                <  2:365241/149‑1 (MQ=255)

                                                                      ccAGACAACATCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCACACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTAACTCTCTTCGAAGAtt                                                                >  7:130295/1‑149 (MQ=255)

                                                                       cAGACAACATCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCACACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCa                                                                                    >  4:51903/1‑128 (MQ=255)

                                                                       cAGACAACATCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCACACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCa                                                                                    <  3:51903/128‑1 (MQ=255)

                                                                       cAGACAACATCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCACACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTAACTCTCTTCGAAGAttt                                                               <  5:228345/149‑1 (MQ=255)

                                                                        aGACAACATCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCACACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTAACTCTCTTCGAAGATTTc                                                              <  5:379614/149‑1 (MQ=255)

                                                                         gACAACATCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCACACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTAACTCTCTTCGAAGATTTc                                                              >  7:38361/1‑148 (MQ=255)

                                                                         gACAACATCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCACACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTAACTCTCTTCGAAGATTTc                                                              >  3:376311/1‑148 (MQ=255)

                                                                          acaacaTCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCACACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTAACTCTCTTCGAAGATTTCaa                                                            >  6:193704/1‑149 (MQ=255)

                                                                            aacaTCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCACACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTAACTCTCTTCGAAGATTTCaa                                                            >  6:13846/1‑147 (MQ=255)

                                                                            aacaTCACAGAAATGTACCTGGAGCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCACACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTAACTCTCTTCGAAGATTTCAATa                                                          <  6:351636/149‑1 (MQ=255)

                                                                             acaTCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCACACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTAACTCTCTTCGAAGATTTCAATAg                                                         <  3:107232/149‑1 (MQ=255)

                                                                              caTCAGAGAAATGTACCTGGATCATAATTGAAACAAAACGGTTAAAAAGTTTGAGCTGGCGCACACAAACCAGCACTTTTTAAAGTTTTGAAATCAGTATGGGGTAGCGACTTTTCTTCCAGGTAACTCTCTTCGAAGATTTCAATAgg                                                        <  2:112936/149‑1 (MQ=255)

                                                                              caTCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCACACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTAACTCTCTTCGAAGATTTCAATAgg                                                        <  7:349008/149‑1 (MQ=255)

                                                                              caTCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCACACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTAACTCTCTTCGAAGATTTCAATAg                                                         <  7:89088/148‑1 (MQ=255)

                                                                              caTCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCACACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTAACTCTCTTCGAAGATTTCAATAg                                                         >  8:89088/1‑148 (MQ=255)

                                                                               aTCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCACACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTAACTCTCTTCGAAGATTTCAATAgg                                                        >  7:29537/1‑148 (MQ=255)

                                                                                tCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCACACAAACCAGCACTTTTTAAAGTTTTTTAATCAGTTTGGGGTAGCTACTTTTCTTCCa                                                                                    >  7:218365/1‑119 (MQ=255)

                                                                                tCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCACACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTAACTCTCTTCGAAGATTTCAATAGGGa                                                      <  3:153710/149‑1 (MQ=255)

                                                                                   caGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCACACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTAACTCTCTTCGAAGATTTCAATAGGGAGTg                                                   >  8:227155/1‑149 (MQ=255)

                                                                                   caGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCACACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGCGTAGCTACTTTTCTTCCAGGTAACTCTCTTCGAAGATTTCAATAGGGAGTg                                                   >  3:26752/1‑149 (MQ=255)

                                                                                    agtaaTGTACCTGGATCATAATTGAAACAAACAGGTTAAAAAGTTTGAGCTGGCTCACACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTAACTCTCTTCGAAGATTTCAATAGGGAGTgg                                                  <  6:72793/146‑1 (MQ=255)

                                                                                      aaaTGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCACACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTAACTCTCTTCGAAGATTTCAATAGGGAGTGGGc                                                <  3:356494/149‑1 (MQ=255)

                                                                                            aCCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCACACACACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTTACTCTCTTCGAAGATTTCAATAGGGTGTGGGCGAGCa                                           >  3:251932/1‑148 (MQ=255)

                                                                                              cTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCACACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTAACTCTCTTCGAAGATTTCAATAGGGAGTGGGCGAGCaaa                                         >  3:93014/1‑148 (MQ=255)

                                                                                              cTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCACACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTAACTCTCTTCGAAGATTTCAATAGGGAGTGGGCGAGCaaa                                         >  8:71547/1‑148 (MQ=255)

                                                                                              cTGGATAATAAATGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCACACAAACCAGCACTGTTTAAAGTTTTTTAATCAGTTTGGGGTAGCTACTTTACTTCCAGGTAACTCTCTTCGAAGATTTCAATAGGGAGTGGGAGAGCaaa                                         >  8:362063/1‑148 (MQ=255)

                                                                                                ggATCATAATTTAAACAAAAAGTTTAAAAAGTTTGAGCTGGCTCACACAAACCAGCACTTTTTAAAGTTTTg                                                                                                                   <  4:348430/72‑1 (MQ=255)

                                                                                                ggATAATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCACACAAAGAAGCACTTTTTAAAGTTTTGTAATAAGTTTGGGGTAGCTACTTTTCTTCCTGGTAACTCTCTTCGAAGTTTTCAATTGGGAGTGGGCGAGCaaaatg                                      >  5:286582/1‑147 (MQ=255)

                                                                                                 gATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCACACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTAACTCTCTTCGAAGATTTCAATAg                                                         >  2:95368/1‑129 (MQ=255)

                                                                                                 gATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCACACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTAACTCTCTTCGAAGATTTCAATAg                                                         <  1:95368/129‑1 (MQ=255)

                                                                                                 gATCATAATTGAAACAAAAAGGGTAAAAAGTTGGAGCTGGCTCACACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTAACTCTCTTCGAAGATTTCAATAGGGAGTGGGCGAGCaaaaa                                       <  6:155213/147‑1 (MQ=255)

                                                                                                   tCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCACACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTAACTCTCTTCGAAGATTTCAATAGGGAGTGGGCGAGCAAAAAGGaa                                   <  1:127103/149‑1 (MQ=255)

                                                                                                       aaTTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCACACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTAACTCTCTTCGAAGATTTCAATAgg                                                        >  6:188805/1‑124 (MQ=255)

                                                                                                       aaTTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCACACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTAACTCTCTTCGAAGATTTCAATAgg                                                        <  5:188805/124‑1 (MQ=255)

                                                                                                        aTTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCACAGAATCCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTAACTCTGTTCAAAGATTTGAATAGGGAGTGGGCGAGCAAAAAGGCAGCCCt                              >  6:109528/1‑149 (MQ=255)

                                                                                                         ttGAAAGAAACATGTTAAAAAGTTTGAGCTGGCTCACACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTAACTCTCTTCGAAGATTTCAATAGGGAGTGGGCGAGCAAAAAGGAAGCCCTg                             <  4:300694/149‑1 (MQ=255)

                                                                                                         ttGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCACACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTAACTCTCTTCGAAGATTTCAATAGGGAGTGGGCGAGCAAAAAGGAAGCCCTg                             >  5:263155/1‑149 (MQ=255)

                                                                                                          tGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCACACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTAACTCTCTTCGAAGATTTCAATAGGGAGTGGGCGAGCAAAAAGGAAGCCCTgg                            >  6:129625/1‑149 (MQ=255)

                                                                                                           gAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCACACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTAACTCTCTTCGAAGATTTCAATAGGGAGTGGGCGAGCaaa                                         <  5:334293/135‑1 (MQ=255)

                                                                                                           gAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCACACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTAACTCTCTTCGAAGATTTCAATAGGGAGTGGGCGAGCaaa                                         >  6:334293/1‑135 (MQ=255)

                                                                                                           gAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCACACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTAACTCTCTTCGAAGATTTCAATAGGGAGTGGGCGAGCAAAAAGGAAGCCCTgg                            <  8:136080/148‑1 (MQ=255)

                                                                                                            aaaCAAAAAGGTTAAAAAGTTTGAGCTGGCTCACACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTAACTCTCTTCGAAGATTTCAATAGGGAGTGGGCGAGCAAAAAGGaa                                   >  2:82466/1‑140 (MQ=255)

                                                                                                            aaaCAAAAAGGTTAAAAAGTTTGAGCTGGCTCACACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTAACTCTCTTCGAAGATTTCAATAGGGAGTGGGCGAGCAAAAAGGaa                                   <  1:82466/140‑1 (MQ=255)

                                                                                                            aaaCAAAAAGGTTAAAAAGTTTGAGCTGGCTCACACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTAACTCTCTTCGAAGATTTCAATAGGGAGTGGGCGAGCAAAAAGGAAGCCCTggg                           >  5:304434/1‑148 (MQ=255)

                                                                                                                 aaaaGGTTAAAAAGTTTGAGCTGGCTCACACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTAACTCTCTTCGAAGATTTCAATAGGGAGTGGGCGAGCAAAAAGGAAGCCCTGGGCAATAc                     >  3:208392/1‑149 (MQ=255)

                                                                                                                    agtttAAAAAGTTTGAGCTGGCTCACACAATCCATCACTTTTTAAAGTTTTGTAATCAGTTTTGGGTAGCTACTTTTCTTCCAGGTAACTCTCTTCTAAGATTTCAATAGGGAGTGGGCGAGCAAAAAGGAAGCCCTGGGCAATACCaa                  <  6:286582/146‑1 (MQ=255)

                                                                                                                       ttAAAAAGTTTGAGCTGGCTCACACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTAACTCTCTTCGAAGATTTCAATAGGGAGTGGGCGAGCAAAAAGGAAGCCCTGGGCAATACCAACGc               >  1:222022/1‑149 (MQ=255)

                                                                                                                          aaaaGTTTGAGCTGGCTCACACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTAACTCTCTTCGAAGATTTCAATAGGGAGTGGGCGAGCAAAAAGGAAGCCCTGGGCAATACCAACGccc             <  1:226571/148‑1 (MQ=255)

                                                                                                                          aaaaGTTTGAGCTGGCTCACACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTAACTCTCTTCGAAGATTTCAATAGGGAGTGGGCGAGCAAAAAGGAAGCCCTGGGCAATACCAACGCCCg            >  6:193760/1‑149 (MQ=255)

                                                                                                                          aaaaGTTTGAGCTGGCTCACACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTAACTCTCTTCGAAGATTTCAATAGGGAGTGGGCGAGCAAAAAGGAAGCCCTGGGCAATACCAACGCCCg            >  8:2818/1‑149 (MQ=255)

                                                                                                                               tttGAGCTGGCTCACACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTAACTCTCTTCGAAGATTTCAATAGGGAGTGGGCGAGCAAAAAGGAAGCCCTGGGCAATACCAACGCCCGCtttt       >  4:181478/1‑149 (MQ=255)

                                                                                                                                ttGAGCTGGCTCACACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTATTCTTCGAGGTAACTCTCTTCGAAGATTTCAATAGGGAGTGGGCGAGCAAAAAGGAAGCCCTGGGCAATACCAACGCCCGCTTTTg      >  6:308354/1‑149 (MQ=255)

                                                                                                                                   aGCTGGCTCACACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTAACTCTCTTCGAAGATTTCAATAGGGAGTGGGCGAGCAAAAAGGAAGCCCTGGGCAATACCAACGCCCGCTTTTgcca   <  4:348193/149‑1 (MQ=255)

                                                                                                                                    gCTGGCTCACACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTAACTCTCTTCGAAGATTTCAATAGGGAGTGGGCGAGCAAAAAGGAAGCCCTGGGCAATACCAACGCCCGCTTTTgccag  >  8:128372/1‑149 (MQ=255)

CATAGGGTGTCCTTTAGTAAAACCACAGGTCTTGTAAGGTTATGGGGTACCTGCGGCCTTAAAATAACACCCAGACAACATCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCGCACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTAACTCTCTTCGAAGATTTCAATAGGGAGTGGGCGAGCAAAAAGGAAGCCCTGGGCAATACCAACGCCCGCTTTTGCCAG  >  NC_000913/3683445‑3683725

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`