New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3967703	54 (1.330)	6 (0.160)	8/236	2.7	10.3%	intergenic (+27/‑213)	rho/wecA	transcription termination factor/UDP‑GlcNAc:undecaprenylphosphate GlcNAc‑1‑phosphate transferase
	?	NC_000913	= 3967707	55 (1.490)					intergenic (+31/‑209)	rho/wecA	transcription termination factor/UDP‑GlcNAc:undecaprenylphosphate GlcNAc‑1‑phosphate transferase
Rejected: Frequency below/above cutoff threshold.

TCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCATTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAAACGCCACGTGTTTACGTGGCGTTTTGCTTTTATATCTGTAATCTTAATGCCGCGCTGGCGATGTTAGGAAAATTCCTGGAATTTGCTGGCATGTTATGCAATTTGCATATCAAATGGTTAATTTTTGCACAGGACTGGTGGGTTTGGAACGGACTT  >  NC_000913/3967561‑3967850                                                                                                                                               |                                                                                                                                                    tCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCATTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAAACGCCACGTaaacac                                                                                                                                               >  1:179431‑M1/1‑143 (MQ=255)    tGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCATTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAAACGCCACGTGTTTacgtg                                                                                                                                            <  3:42316‑M2/149‑6 (MQ=255)      cgcAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCATTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAAACGCCACGTaaacacgtggc                                                                                                                                          <  2:179431‑M1/149‑12 (MQ=255)           aaTCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCATTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAAACGCCACGTGTTTacgtggcgtttt                                                                                                                                     <  2:126175‑M2/149‑13 (MQ=255)             tCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCATTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAAACGCCACGTGTTTACGTGGCGTTTTGc                                                                                                                                   <  1:205096/149‑1 (MQ=255)             tCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCATTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAAACGCCACGTGTTTACGTGGCGTTTTGc                                                                                                                                   <  3:40089/149‑1 (MQ=255)                       gATGGGCGAAATCGATGCAATGGAATTCCTCATTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAAACGCCACGTAAACacgtggcgtt                                                                                                                                       >  3:92354‑M2/1‑125 (MQ=255)                       gATGGGCGAAATCGATGCAATGGAATTCCTCATTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAAACGCCACGTAAACacgtggcgtt                                                                                                                                       <  4:92354‑M2/135‑11 (MQ=255)                         tGGGCGAAATCGATGCAATGGAATTCCTCATTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAAACGCCACGTGTTTacgtggcgtt                                                                                                                                       <  2:206782‑M2/133‑11 (MQ=255)                         tGGGCGAAATCGATGCAATGGAATTCCTCATTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAAACGCCACGTGTTTacgtggcgtt                                                                                                                                       >  1:206782‑M2/1‑123 (MQ=255)                            gCGAAATCGATGCAATGGAATTCCTCATTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAAACGCCACGTGTTTACGTGGCGTTTTGCTTTTATATCTGTAAt                                                                                                                    >  3:1882/1‑149 (MQ=255)                             cGAAATCGATGCAATGGAATTCCTCATTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAAACGCCACGTGTTTACGTGGCGTTTTGCTTTTATATCTGTAATc                                                                                                                   <  4:42316/149‑1 (MQ=255)                             cGAAATCGATGCAATGGAATTCCTCATTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAAACGCCACGTGTTTACGTGGCGTTTTGCTTTTATATCTGTAATc                                                                                                                   <  6:141964/149‑1 (MQ=255)                                     aTGCAATGGAATTCCTCATTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAAACGCCACGTGTTTACGTGGCGTTTTGCTTTTATATCTGTAATCTTAATGcc                                                                                                           >  6:48466/1‑149 (MQ=255)                                                    tCATTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAAACGCCACGTAAACacgtggcgtttttggcataagacaaatttatgagcgtttcatcattt                                                                                                  >  3:156292‑M2/1‑96 (MQ=255)                                                    tCATTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAAACGCCACGTAAACacgtggcgtttttggcataagacaaatttatgagcgtttcatcattt                                                                                                  <  4:156292‑M2/143‑48 (MQ=255)                                                         aataaACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAAACGCCACGTGTTTACGTGGCGTTTTGCTTTTATATCTGTAATCTTAATGCCGCGCTGGCGATGTTAGGaa                                                                                        >  1:23950/1‑148 (MQ=255)                                                          ataaACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAAACGCCACGTGTTTACGTGGCGTTTTGCTTTTATATCTGTAATCTTAATGCCGCGCTgg                                                                                                    <  3:83203/135‑1 (MQ=255)                                                          ataaACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAAACGCCACGTGTTTACGTGGCGTTTTGCTTTTATATCTGTAATCTTAATGCCGCGCTgg                                                                                                    >  4:83203/1‑135 (MQ=255)                                                            aaaCTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAAACGCCACGTGTTTACGTGGCGTTTTGCTTTTATATCTGTAATCTTAATGCCGCGCTGGCGATGTTAGGAAAAtt                                                                                    >  5:15514/1‑149 (MQ=255)                                                               cTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAAACGCCACGTGTTTACGTGGCGTTTTGCTTTTATATCTGTAATCTTAATGCCGCGCTGGCGATGTTAGGAAAATTCCt                                                                                 <  6:96314/149‑1 (MQ=255)                                                                tGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAAACGCCACGTGTTTACGTGGCGTTTTGCTTTTATATCTGTAATCTTAATGCCGCGCTGGCGATGTTAGGAAAATTCCTg                                                                                >  1:41299/1‑149 (MQ=255)                                                                  gCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAAACGCCACGTGTTTACGTGGCGTTTTGCTTTTATATCTGTAATCTTAATGCCGCGCTGGCGATg                                                                                               <  2:208517/132‑1 (MQ=255)                                                                  gCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAAACGCCACGTGTTTACGTGGCGTTTTGCTTTTATATCTGTAATCTTAATGCCGCGCTGGCGATg                                                                                               >  1:208517/1‑132 (MQ=255)                                                                   cAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAAACGCCACGTGTTTACGTGGCGTTTTGCTTTTATATCTGTAATCTTAATGCCGCGCTGGCGATGTTAGGAAAATTCCTGGaa                                                                             >  1:152113/1‑149 (MQ=255)                                                                    aaTGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAAACGCCACGTgtttacgtggcgtttttggcataagacaaatttatgagcgtttcatc                                                                                                      <  8:156655‑M1/123‑48 (MQ=255)                                                                    aaTGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAAACGCCACGTgtttacgtggcgtttttggcataagacaaatttatgagcgtttcatc                                                                                                      >  7:156655‑M1/1‑76 (MQ=255)                                                                      tGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAAACGCCACGTGTTTACGTGGCGTTTTGCTTTTATATCTGTAATCTTAATGCCGCGCTGGCGATGTTAGGAAAATTCCTGGAAttt                                                                          >  4:44183/1‑149 (MQ=255)                                                                          caataccaaTGACGATTTATTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAAACGCCACGTGTTTACGTGGCGTTTTGCTTTTATATCTGTAATCTTAATGCCGCGCTGGCGATGTTa                                                                                            >  6:134330/1‑127 (MQ=255)                                                                          caagaccaaTGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAAACGCCACGTGTTTACGTGGCGTTTTGCTTTTATATCTGTAATCTTAATGCCGCGCTGGCGATGTTa                                                                                            <  5:134330/127‑1 (MQ=255)                                                                          caagaccaaTGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAAACGCCACGTGTTTACGTGGCGTTTTGCTTTTATATCTGTAATCTTAATGCCGCGCTGGCGATGTTAGGAAAATTCCTGGAATTTGCTg                                                                      <  1:126175/149‑1 (MQ=255)                                                                              accaaTGACGATTTCTTCGAAATGAGGAAACGCTCATAAATTTGTCTTATGCCAAAAACGCCACGTGTTTACGTGGCGTTTTGCTTTTATATCTGTAATCTTAATGCCGCGCTGGCGATGTTAGGAAAATTCCTGGAATTTGCTGGCAt                                                                  <  3:44183/149‑1 (MQ=255)                                                                                    gACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAAACGCCACGTGTTTACGTGGCGTTTTGCTTTTATATCTGTAATCTTaa                                                                                                               <  2:819/98‑1 (MQ=255)                                                                                    gACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAAACGCCACGTGTTTACGTGGCGTTTTGCTTTTATATCTGTAATCTTaa                                                                                                               >  1:819/1‑98 (MQ=255)                                                                                     aCGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAAACGCCACGTGTTTACGTGGCGTTTTGCTTTTATATCTGTAATCTTAATGCCGCGCTGGCGATGTTAGGAAAATTCCTGGAATTTGCTGGCATGTTATg                                                            >  6:89557/1‑148 (MQ=255)                                                                                     aCGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAAACGCCACGTGTTTACGTGGCGTTTTGCTTTTATATCTGTAATCTTAATGCCGCGCTGGCGATGTTAGGAAAATTCCTGGAATTTGCTGGCATGTTATg                                                            <  2:41299/148‑1 (MQ=255)                                                                                          ttcttcGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAAACGCCACGTGTTTACGTGGCGTTTTGCTTTTATATCTGTAATCTTAATGCCGCGCTGGCGATGTTAGGAAAATTCCTGGAATTTGCTGGCATGTTATGCAAttt                                                      >  2:90416/1‑149 (MQ=255)                                                                                             ttcGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAAACGCCACGTGTTTACGTGGCGTTTTGCTTTTATATCTGTAATCTTAATGCCGCGCTGGCGATGTTAGGAAAATTCCTGGAATTTGCTGGCATGTTATGCAATTTGCa                                                   >  2:56272/1‑149 (MQ=255)                                                                                                 aaaTGATGAAACGCTCATAAATTTGTCTTATGCCAAAAACGCCACGTgtttacgtggcgtttttggcataagacaaatttatgagcgtttcatcatttcgaagaaatcgtcattggtcttggtcattgccagtttattaatga                                                     <  4:156292‑M1/143‑97 (MQ=255)                                                                                                 aaaTGATGAAACGCTCATAAATTTGTCTTATGCCAAAAACGCCACGTgtttacgtggcgtttttggcataagacaaatttatgagcgtttcatcatttcgaagaaatcgtcattggtcttggtcattgccagtttattaatga                                                     >  3:156292‑M1/1‑47 (MQ=255)                                                                                                 aaaTGATGAAACGCTCATAAATTTGTCTTATGCCAAAAACGCCACGTGTTTACGTGGCGTTTTGCTTTTATATCTGTAATCTTAATGCCGCGCTGTCGATGTTAGGAAAATTCCTGGAATTTGCTGGCATGTTATGCAATTTGCATATc                                               <  3:23822/149‑1 (MQ=255)                                                                                                  aaTGATGAAACGCTCATAAATTTGTCTTATGCCAAAAACGCCACGTGTTTACGTGGCGTTTTGCTTTTATATCTGTAATCTTAATGCCGCGCTGGCGATGTTAGGAAAATTCCTGGAATTTGCTGGCATGTTATGCAATTTGCATATc                                               >  1:103775/1‑148 (MQ=255)                                                                                                  aaTGATGAAACGCTCATAAATTTGTCTTATGCCAAAAACGCCACGTGTTTACGTGGCGTTTTGCTTTTATATCTGTAATCTTAATGCCGCGCTGGCGATGTTAGGAAAATTCCTGGAATTTGCTGGCATGTTATGCAATTTGCATATc                                               >  3:42040/1‑148 (MQ=255)                                                                                                    tgatgaAACGCTCATAAATTTGTCTTATGCCAAAAACGCCACGTGTTTACGTGGCGTTTTGCTTTTATATCTGTAATCTTAATGCCGCGCTGGCGATGTTAGGAAAATTCCTGGAATTTGCTGGCATGTTATGCAATTTGCATATCaaa                                            >  5:167943/1‑149 (MQ=255)                                                                                                    tgatgaAACGCTCATAAATTTGTCTTATGCCAAAAACGCCACGTGTTTACGTGGCGTTTTGCTTTTATATCTGTAATCTTAATGCCGCGCTGGCGATGTTAGGAAAATTCCTGGAATTTGCTGGCATGTTATGCAATTTGCATATCaaa                                            >  4:45733/1‑149 (MQ=255)                                                                                                     gatgaAACGCTCATAAATTTGTCTTATGCCAAAAACGCCACGTAAACacgtggcgtttttggcataagacaaatttatgagcgtttcatcatttcgaagaaatcgtcattggtcttggtcatt                                                                     >  7:156655‑M2/1‑47 (MQ=255)                                                                                                     gatgaAACGCTCATAAATTTGTCTTATGCCAAAAACGCCACGTAAACacgtggcgtttttggcataagacaaatttatgagcgtttcatcatttcgaagaaatcgtcattggtcttggtcatt                                                                     <  8:156655‑M2/123‑77 (MQ=255)                                                                                                      atgaAACGCTCATAAATTTGTCTTATGCCAAAAACGCCACGTGTTTACGTGGCGTTTTGCTTTTATATCTGTAATCTTAATGCCGCGCTGGCGATGTTAGGAAAATTCCTGGAATTTGCTGGCATGTTATGCAATTTGCATATCAAAt                                           <  7:144394/148‑1 (MQ=255)                                                                                                       tgaAACGCTCATAAATTTGTCTTATGCCAAAAACGCCACGTGTTTACGTGGCGTTTTGCTTTTATATCTGTAATCTTAATGCCGCGCTGGCGATGTTAGGAAAATTCCTGGAATTTGCTGGCATGTTATGCAATTTGCATATCAAATgg                                         <  6:15514/149‑1 (MQ=255)                                                                                                            cGCTCATAAATTTGTCTTATGCCAAAAACGCCACGTGTTTACGTGGCGTTTTGCTTTTATATCTGTAATCTTAATGCCGCGCTGGCGATGTTAGGAAAATTCCTGGAATTTGCTGGCATGTTATGCAATTTGCATATCAAATGGTTAAt                                    <  2:103775/149‑1 (MQ=255)                                                                                                            cGCTCATAAATTTGTCTTATGCCAAAAACGCCACGTGTTTACGTGGCGTTTTGCTTTTATATCTGTAATCTTAATGCCGCGCTGGCGATGTTAGGAAAATTCCTGGAATTTGCTGGCATGTTATGCAATTTGCATATCAAATGGTTAAt                                    <  1:90416/149‑1 (MQ=255)                                                                                                               tCATAAATTTGTCTTATGCCAAAAACGCCACGTGTTTACGTGGCGTTTTGCTTTTATATCTGTAATCTTAATGCCGCGCTGGCGATGTTAGGAAAATTCCTGGAATTTGCTGGCATGTTATGCAATTTGCATATCAAATGGTTAAtttt                                 >  1:121769/1‑149 (MQ=255)                                                                                                                 aTAAATTTGTCTTATGCCAAAAACGCCACGTGTTTACGTGGCGTTTTGCTTTTATATCTGTAATCTTAATGCCGCGCTGGCGATGTTAGGAAAATTCCTGGAATTTGCTGGCATGTTATGCAATTTGCATATCAAATGGTTAAtttt                                 <  2:121769/147‑1 (MQ=255)                                                                                                                  tAAATTTGTCTTATGCCAAAAACGGCACGTGTTTACGTTGCGTTTTGCTTTTATATCTGTAATCTTAATGCCGAGCTGGCGATGTTAGGAAAATTCCTGGAATTTGCTGGCATGTTATGCAATTTGCATATCAAATGGTTAATTTTTGc                              <  3:126902/149‑1 (MQ=255)                                                                                                                     aTTTGTCTTATGCCAAAAACGCCACGTGTTTACGTGGCGTTTTGCTTTTATATCTGTAATCTTAATGCCGCGCTGGCGATGTTAGGAAAATTCCTGGAATTTGCTGGCATGTTATGCAATTTGCATATCAAATGGTTAATTTTTGcaca                           <  5:89557/149‑1 (MQ=255)                                                                                                                      tttGTCTTATGCCAAAAACGCCACGTGTTTACGTGGCGTTTTGCTTTTATATCTGTAATCTTAATGCCGCGCTGGCGATGTTAGGAAAATTCCTGGAATTTGCTGGCATGTTATGCAATTTGCATATCAAATGGTTAATTTTTGCACAg                          >  8:100341/1‑149 (MQ=255)                                                                                                                          tCTTATGCCAAAAACGCCACGTGTTTACGTGGCGTTTTGCTTTTGTATCTGTAATCTTAATGCCGCGCTGGCGATGTTAGGAAAATTCCTGGAATTTGCTGGCATGTTATGCAATTTGCATATCAAATGGTTAATTTTTGCACAGGACt                      >  5:42496/1‑149 (MQ=255)                                                                                                                            ttATGCCAAAAACGCCACGTGTTTACGTGGCGTTTTGCTTTTATATCTGTAATCTTAATGCCGCGCTGGCGATGTTAGGAAAATTCCTGGAATTTGCTGGCATTTTATGCAATTTGCATATCAAATGGTTAAtt                                   >  4:44809/1‑134 (MQ=255)                                                                                                                            ttATGCCAAAAACGCCACGTGTTTACGTGGCGTTTTGCTTTTATATCTGTAATCTTAATGCCGCGCTGGCGATGTTAGGAAAATTCCTGGAATTTGCTGGCATTTTATGCAATTTGCATATCAAATGGTTAAtt                                   <  3:44809/134‑1 (MQ=255)                                                                                                                                  cAAAAACGCCACGTGTTTACGTGGCGTTTTGCTTTTATATCTGTAATCTTAATGCCGCGCTGGCGATGTTAGGAAAATTCCt                                                                                 <  1:133112/82‑1 (MQ=255)                                                                                                                                  cAAAAACGCCACGTGTTTACGTGGCGTTTTGCTTTTATATCTGTAATCTTAATGCCGCGCTGGCGATGTTAGGAAAATTCCt                                                                                 >  2:133112/1‑82 (MQ=255)                                                                                                                                  cAAAAACGCCACGTGTTTACGTGGCGTTTTGCTTTTATATCTGTAATCTTAATGCCGCGCTGGCGATGTTAGGAAAATTCCTGGAATTTGCTGGCATGTTATGCAATTTGCATATCAAATgg                                         <  3:157364/122‑1 (MQ=255)                                                                                                                                  cAAAAACGCCACGTGTTTACGTGGCGTTTTGCTTTTATATCTGTAATCTTAATGCCGCGCTGGCGATGTTAGGAAAATTCCTGGAATTTGCTGGCATGTTATGCAATTTGCATATCAAATgg                                         >  4:157364/1‑122 (MQ=255)                                                                                                                                  cAAAAACGCCACGTGTTTACGTGGCGTTTTGCTTTTATATCTGTAATCTTAATGCCGCGCTGGCGATGTTAGGAAAATTCCTGGAATTTGCTGGCATGTTATGCAATTTGCATATCAAATGGTTAATTTTTGCACAGGACtggt                   <  5:90105/144‑1 (MQ=255)                                                                                                                                  cAAAAACGCCACGTGTTTACGTGGCGTTTTGCTTTTATATCTGTAATCTTAATGCCGCGCTGGCGATGTTAGGAAAATTCCTGGAATTTGCTGGCATGTTATGCAATTTGCATATCAAATGGTTAATTTTTGCACAGGACtggt                   >  6:90105/1‑144 (MQ=255)                                                                                                                                  cAAAAACGCCACGTGTTTACGTGGCGTTTTGCTTTTATATCTGTAATCTTAATGCCGCGCTGGCGATGTTAGGAAAATTCCTGGAATTTGCTGGCATGTTATGCAATTTGCATATCAAATGGTTAATTTTTGCACAGGACTGGTGGGtt              >  5:58922/1‑149 (MQ=255)                                                                                                                                    aaaaCGCCACGTaaacacgtggcgtttttggcataagacaaatttatgagcgtttcatcatttcgaagaaatcgtcattggtcttggtcattgccagtttattaatgaggaattccattgcatcgatttcgcccatcgggtgaatgatt            <  2:126175‑M1/149‑138 (MQ=255)                                                                                                                                      aaCGCCACGTgtttacgtggcgtttttggcataagacaaatttatgagcgtttcatcatttcgaagaaatcgtcattggtcttggtcattgccagtttattaatgaggaattccattgcatcgatttcgcccatc                        >  3:92354‑M1/1‑10 (MQ=255)                                                                                                                                      aaCGCCACGTgtttacgtggcgtttttggcataagacaaatttatgagcgtttcatcatttcgaagaaatcgtcattggtcttggtcattgccagtttattaatgaggaattccattgcatcgatttcgcccatc                        <  4:92354‑M1/135‑126 (MQ=255)                                                                                                                                      aaCGCCACGTaaacacgtggcgtttttggcataagacaaatttatgagcgtttcatcatttcgaagaaatcgtcattggtcttggtcattgccagtttattaatgaggaattccattgcatcgatttcgccca                          <  2:206782‑M1/133‑124 (MQ=255)                                                                                                                                      aaCGCCACGTaaacacgtggcgtttttggcataagacaaatttatgagcgtttcatcatttcgaagaaatcgtcattggtcttggtcattgccagtttattaatgaggaattccattgcatcgatttcgccca                          >  1:206782‑M1/1‑10 (MQ=255)                                                                                                                                       aCGCCACGTGTTTACGTGGCGTTTTGCTTTTATATCTGTAATCTTAATGCCGCGCTGGCGATGTTAGGAAAATTCCTGGAATTTGCTGGCATGTTATGCAATTTGCATATCAAATGGTTAATTTTTGCACAGGACTGGTGGGTTTGGaa         <  4:1882/149‑1 (MQ=255)                                                                                                                                         gCCACGTGTTTacgtggcgtttttggcataagacaaatttatgagcgtttcatcatttcgaagaaatcgtcattggtcttggtcattgccagtttattaatgaggaattccattgcatcgatttcgcccatcgggtgaatgattttgcg       <  2:179431‑M2/149‑139 (MQ=255)                                                                                                                                           cACGTaaacacgtggcgtttttggcataagacaaatttatgagcgtttcatcatttcgaagaaatcgtcattggtcttggtcattgccagtttattaatgaggaattccattgcatcgatttcgcccatcgggtgaatgattttgcgca     <  3:42316‑M1/149‑145 (MQ=255)                                                                                                                                            aCGTGTTTACGTGGCGTTTTGCTTTTATATCTGTAATCTTAATGCCGCGCTGGCGATGTTAGGAAAATTCCTGGAATTTGCTGGCATGTTATGCAATTTGCATATCAAATGGTTAATTTTTGCACAGGACTGGTGGGTTTGGAACGGAc    <  2:152113/149‑1 (MQ=255)                                                                                                                                             cGTGTTTACGTGGCGTTTTGCTTTTATATCTGTAATCTTAATGCCGCGCTGGCGATGTTAGGAAAATTCCTGGAATTTGCTGGCATGTTATGCAATTTGCATATCAAATGGTTAATTTTTGCACAGGACTGGTGGGTTTGGAACGGACt   <  1:56272/149‑1 (MQ=255)                                                                                                                                              gtgtTTacgtggcgtttttggcataagacaaatttatgagcgtttcatcatttcgaagaaatcgtcattggtcttggtcattgccagtttattaatgaggaattccattgcatcgatttcgcccatcgggtgaatgattttgcgcagga  >  1:179431‑M2/1‑6 (MQ=255)                                                                                                                                              gtgtTTACGTGGCGTTTTGCTTTTATATCTGTAATCTTAATGCCGCGCTGGCGATGTTAGGAAAATTCCTGGAATTTGCTGGCATGTTATGCAATTTGCATATCAAATGGTTAATTTTTGCACAGGACTGGTGGGTTTGGAACGGACtt  <  4:42040/149‑1 (MQ=255)                                                                                                                                               |                                                                                                                                                    TCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCATTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAAACGCCACGTGTTTACGTGGCGTTTTGCTTTTATATCTGTAATCTTAATGCCGCGCTGGCGATGTTAGGAAAATTCCTGGAATTTGCTGGCATGTTATGCAATTTGCATATCAAATGGTTAATTTTTGCACAGGACTGGTGGGTTTGGAACGGACTT  >  NC_000913/3967561‑3967850

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.