New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 731787 =76 (0.870)4 (0.050) 4/252 NT 5.4% coding (2205/4194 nt) rhsC Rhs protein with putative toxin domain; putative neighboring cell growth inhibitor
?NC_000913 731804 = 67 (0.810)coding (2222/4194 nt) rhsC Rhs protein with putative toxin domain; putative neighboring cell growth inhibitor

GCAGCGAGGATGAGGGGCTGGTCACCCACTGGCACTATGACGAAGCAGACCGCCTCACGCACCGCACCGTGAATGGCGAAACCGCAGAGCGGTGGCAGTATGACGAACGCGGCTGGCTGACAGACATCAGCCATATCAGCGAAGGGCACCGGGTGACGGTGCACTATGGTTATGACAGTAAAGGCCGCCTCGCCAGTGAACACCTGACGGTGCATCATCCGCAGACGAATGAACTGCTCTGGCAGCATGAGACCAGACATGCGTACAACGCACAGGGACTGGCGAACCGCTGTA  >  NC_000913/731642‑731935
                                                                                                                                                 |                                                                                                                                                    
aggctgtccggtatacagcggttcgccagtccctgtgcgttgtacgcatgtctggtctcatgctgccagagcagttcattcgtctgcggatgatgcaccgtcaggtgttcactggcgaggcggcctttactgtcataaccatagtGCAc                                                                                                                                                   >  1:257820‑M1/146‑149 (MQ=255)
   gCGAGGATGAGGGGCTGGTCACCCACTGGCACTATGACGAAGCAGACCGCCTCACGCACCGCACCGTGAATGGCGAAACCGCAGAGCGGTGGCAGTATGACGAACGCGGCTGGCTGACAGACATCAGCCATATCAGCGAAGGGCACCgg                                                                                                                                                >  2:56520/1‑149 (MQ=39)
   gCGAGGATGAGGGGCTGGTCACCCACTGGCACTATGACGAAGCAGACCGCCTCACGCACCGCACCGTGAATGGCGAAACCGCAGAGCGGTGGCAGTATGACGAACGCGGCTGGCTGACAGACATCAGCCATATCAGCGAAGGGCACCgg                                                                                                                                                <  7:21215/149‑1 (MQ=39)
   gCGAGGATGAGGGGCTGGTCACCCACTGGCACTATGACGAAGCAGACCGCCTCACGCACCGCACCGTGAATGGCGAAACCGCAGAGCGGTGGCAGTATGACGAACGCGGCTGGCTGACAGACATCAGCCATATCAGCGAAGGGCACCgg                                                                                                                                                <  7:209522/149‑1 (MQ=39)
    tgtccggtatacagcggttcgccagtccctgtgcgttgtacgcatgtctggtctcatgctgccagagcagttcattcgtctgcggatgatgcaccgtcaggtgttcactggcgaggcggcctttactgtcataaccataggGCACCggg                                                                                                                                               <  6:175886‑M1/8‑1 (MQ=255)
         aggcggggCTGGTCACCCACTGGCACTATGACGCAGCAGACCGCCTCACGCACCGCACCGCGAATGGCGAAACCGCAGAGCGGTGGCAGTATGACGAACGCGGCTGGCGGACAGACATCAGCCATATCAGCGAAGGGCACCGGGTGACg                                                                                                                                          <  6:287/145‑1 (MQ=255)
         aTGAGGGGCTGGTCACCCACTGGCACTATGACGAAGCAGACCGCCTCACGCACCGCACCGTGAATGGCGAAACCGCAGAGCGGTGGCAGTATGACGAACGCGGCTGGCTGACAGACATCAGCCATATCAGCGAAGGGCACCGGGTGACg                                                                                                                                          >  8:164240/1‑149 (MQ=255)
           gAGGGGCTGGTCACCCACTGGCACTATGACGAAGCAGACCGCCTCACGCACCGCACCGTGAATGGCGAAACCGCAGAGCGGTGGCAGTATGACGAACGCGGCTGGCTGACAGACATCAGCCATATCAGCGAAGGGCACCGGGTGACGGt                                                                                                                                        >  3:165551/1‑149 (MQ=255)
            aGGGGCTGGTCACCCACTGGCACTATGACGAAGCAGACCGCCTCACGCACCGCACCGTGAATGGCGAAACCGCAGAGCGGTGGCAGTATGACGAACGCGGCTGGCTGACAGACATCAGCCATATCGGCGAAGGGCACCGGGTGACGGTg                                                                                                                                       <  4:118450/149‑1 (MQ=255)
                gCTGGTCACCCACTGGCACTATGACGAAGCAGACCGCCTCACGCACCGCACCGTGAATCGCGAAACCGCAGAGCGGTGGCAGTATGACGAACGCGGCTGGCTGACAGACATCAGCCATATCAGCGAAGGGCACCGGGTGACGGTGCAc                                                                                                                                    >  8:371624/1‑148 (MQ=255)
                  tGGTCACCCACTGGCACTATGACGAAGCAGACCGCCTCACGCACCGCACCGTGAATGGCGAAACCGCAGAGCGGTGGCAGTATGACGAACGCGGCTGGCTGACAGACATCAGCCATATCAGCGAAGGGCACCGGGTGACGGTGCACTAt                                                                                                                                 <  4:165551/149‑1 (MQ=255)
                   ggttcgccagtccctgtgcgttgtacgcatgtctggtctcatgctgccagagcagttcattcgtctgcggatgatgcaccgtcaggtgttcactggcgaggcggcctttactgtcataaccatagtGCACCGGGTGACGGTGCACTATg                                                                                                                                >  6:160254‑M1/127‑149 (MQ=255)
                   ggTCACCCACTGGCACTATGACGAAGCAGACCGCCTCACGCACCGCACCGTGAATGGCGAAACCGCAGAGCGGTGGCAGTATGACGAACGCGGCTGGCTGACAGACATCAGCCATATCAGCGAAGGGCACCGGGTGACGGTGCACTATg                                                                                                                                <  6:379184/149‑1 (MQ=255)
                         ccACTGGCACTATGACGAAGCAGACCGCCTCACGCACCGCACCGTGAATGGCGAAACCGCAGAGCGGTGGCAGTATGACGAACGCGGCTGGCTGACAGACATCAGCCATATCAGCGAAGGGCACCGGGTGACGGTGCACTATGGTTAt                                                                                                                           >  4:26134/1‑148 (MQ=255)
                          cACTGGCACTATGACGAAGCAGACCGCCTCACGCACCGCACCGTGAATGGCGAAACCGCAGAGCGGTGGCAGTATGACGAACGCGGCTGGCTGACAGACATCAGCCATATCAGCGAAGGGCACCGGGTGACGGTGCACTATGGTTATGa                                                                                                                         <  3:261862/149‑1 (MQ=255)
                          cACTGGCACTATGACGAAGCAGACCGCCTCACGCACCGCACCGTGAATGGCGAAACCGCAGAGCGGTGGCAGTATGACGAACGCGGCTGGCTGACAGACATCAGCCATATCAGCGAAGGGCACCGGGTGACGGTGCACTATGGTTATGa                                                                                                                         <  2:55851/149‑1 (MQ=255)
                          cACTGGCACTATGACGAAGCAGACCGCCTCACGCACCGCACCGTGAATGGCGAAACCGCAGAGCGGTGGCAGTATGACGAACGCGGCTGGCTGACAGACATCAGCCATATCAGCGAAGGGCACCGGGTGACGGTGCACTATGGTTATGa                                                                                                                         <  7:371624/149‑1 (MQ=255)
                            cTGGCACTATGACGAAGCAGACCGCCTCACGCACCGCACCGTGAATGGCGAAACCGCAGAGCGGTGGCAGTATGACGAACGCGGCTGGCTGACAGACATCAGCCATATCAGCGAAGGGCACCGGGTGACGGTGCACTATGGTTATGa                                                                                                                         >  7:340799/1‑147 (MQ=255)
                            cTGGCACTATGACGAAGCAGACCGCCTCACGCACCGCACCGTGAATGGCGAAACCGCAGAGCGGTGGCAGTATGACGAACGCGGCTGGCTGACAGACATCAGCCATATCAGCGAAGGGCACCGGGTGACGGTGCACTATGGTTATGa                                                                                                                         >  3:279618/1‑147 (MQ=255)
                            cTGGCACTATGACGAAGCAGACCGCCTCACGCACCGCACCGTGAATGGCGAAACCGCAGAGCGGTGGCAGTATGACGAACGCGGCTGGCTGACAGACATCAGCCATATCAGCGAAGGGCACCGGGTGACGGTGCACTATGGTTATGACa                                                                                                                       <  5:116233/149‑1 (MQ=255)
                            cTGGCACTATGACGAAGCAGACCGCCTCACGCACCGCACCGTGAATGGCGAAACCGCAGAGCGGTGGCAGTATGACGAACGCGGCTGGCTGACAGACATCAGCCATATCAGCGAAGGGCACCGGGTGACGGTGCACTATGGTTATGACa                                                                                                                       <  6:46107/149‑1 (MQ=255)
                               gCACTATGACGAAGCAGACCGCCTCACGCACCGCACCGTGAATGGCGAAACCGCAGAGCGGTGGCAGTATGACGAACGCGGCTGGCTGACAGACATCAGCCATATCAGCGAAGGGCACCGGGTGa                                                                                                                                            >  4:185969/1‑125 (MQ=39)
                               gCACTATGACGAAGCAGACCGCCTCACGCACCGCACCGTGAATGGCGAAACCGCAGAGCGGTGGCAGTATGACGAACGCGGCTGGCTGACAGACATCAGCCATATCAGCGAAGGGCACCGGGTGa                                                                                                                                            <  3:185969/125‑1 (MQ=39)
                                 aCTATGACGAAGCAGACCGCCTCACGCACCGCACCGTGAATGGCGAAACCGCAGAGCGGTGGCAGTATGACGAACGCGGCTGGCTGACAGACATCAGCCATATCAGCGAAGGGCACCGGGTGACGGTGCACTATGGTTATGACAGTaaa                                                                                                                  <  7:155431/149‑1 (MQ=255)
                                 aCTATGACGAAGCAGACCGCCTCACGCACCGCACCGTGAATGGCGAAACCGCAGAGCGGTGGCAGTATGACGAACGCGGCTGGCTGACAGACATCAGCCATATCAGCGAAGGGCACCGGGTGACGGTGCACTATGGTTATGACAGTa                                                                                                                    >  2:70891/1‑147 (MQ=255)
                                  cTATGACGAAGCAGACCGCCTCACGCACCGCACCGTGAATGGCGAAACCGCAGAGCGGTGGCAGTATGACGAACGCGGCTGGCTGACAGACATCAGCCATATCAGCGAAGGGCACCGGGTGACGGTGCACTATGGTTATGACAGTAAAg                                                                                                                 >  8:8564/1‑149 (MQ=255)
                                   tATGACGAAGCAGACCGCCTCACGCCCCGCACCGTGAATGGCGAAACCGCAGAGCGGTGGCAGTATGACGAACGCGGCTGGCTGACAGACATCAGCCATATCAGCGAAGGGCACCGCGTGACGGTGCACTATGGTTATGACCGTAAAgg                                                                                                                >  4:100554/1‑149 (MQ=255)
                                      gACGAAGCAGACCGCCTCACGCACCGCCCCGTGAATGGCGAAACCGCAGAGTGGGGGCAGTATGACGAACGCGGCTGGCTGACAGACATCAGCCAGATCAGCGAAGGGCCCCGGGTGCCGGTGCACTATGGTTATGACAGTAAAGgcag                                                                                                             >  1:167564/1‑147 (MQ=17)
                                       aCGAAGCAGACCGCCTCACGCACCGCACCGTGAATGGCGAAACCGCAGAGCGGTGGCAGTATGACGAACGCGGCTGGCTGACAGACATCAGCCATATCAGCGAAGGGCACCGGGTGACGGTGCACTATGGTTATGACAGTAAAGgccgc                                                                                                            >  8:320951/1‑149 (MQ=255)
                                         gAAGCAGACCGCCTCACGCACCGCACCGTGAATGGCGAAACCGCAGAGCGGTGGCAGTATGACGAACGCGGCTGGCTGACAGACATCAGCCATATCAGCGAAGGGCACCGGGTGACGGTGCACTATGGTTATGACAGTAAAGGCCGCCt                                                                                                          >  4:88382/1‑149 (MQ=255)
                                         gAAGCAGACCGCCTCACGCACCGCACCGTGAATGGCGAAACCGCAGAGCGGTGGCAGTATGACGAACGCGGCTGGCTGACAGACATCAGCCATATCAGCGAAGGGCACCGGGTGACGGTGCACTATGGTTATGACAGTAAAGGCCGCCt                                                                                                          >  4:83359/1‑149 (MQ=255)
                                            gCAGACCGCCTCACGCACCGCACCGTGAATGGCGAAACCGCAGAGCGGTGGCAGTATGACGAACGCGGCTGGCTGACAGACATCAGCCATATCAGCGAAGGGCACCGGGTGACGGTGCACTATGGTTATGACAGTAAAGGCCGCCTCGc                                                                                                       <  8:284774/149‑1 (MQ=255)
                                            gCAGACCGCCTCACGCACCGCACCGTGAATGGCGAAACCGCAGAGCGGTGGCAGTATGACGAACGCGGCTGGCTGACAGACATCAGCCATATCAGCGAAGGGCACCGGGTGACGGTGCACTATGGTTATGACAGTAAAGGCCGCCTCGc                                                                                                       >  1:319950/1‑149 (MQ=255)
                                            gCAGACCGCCTCACGCACCGCACCGTGAATGGCGAAACCGCAGAGCGGTGGCAGTATGACGAACGCGGCTGGCTGACAGACATCAGCCATATCAGCGAAGGGCACCGGGTGACGGTGCACTATGGTTATGACAGTAAAGGCCGCCTCGc                                                                                                       <  7:290766/149‑1 (MQ=255)
                                             gcatgtctggtctcatgctgccagagcagttcattcgtctgcggatgatgcaccgtcaggtgttcactggcgaggcggcctttactgtcataaccatagtGCAcc                                                                                                                                                  >  8:286776‑M1/101‑105 (MQ=255)
                                             gcatgtctggtctcatgctgccagagcagttcattcgtctgcggatgatgcaccgtcaggtgttcactggcgaggcggcctttactgtcataaccatagtGCAcc                                                                                                                                                  <  7:286776‑M1/5‑1 (MQ=255)
                                               gACCGCCTCACGCACCGCACCGGGAATGGCGAAACCGCAGAGCGGTGGCAGTATGACGAACGCGGCTGGCTGACAGACATCAGCCATATCAGCGAAGGGCACCGGGTGACGGTGCACTATGGTTATGACAGTAAAGGCCGCCTCGCCAg                                                                                                    <  6:338035/149‑1 (MQ=255)
                                                atcGCCTCACGCACCGCACCGTGAATGGCGAAACCGCAGAGCGGTGGCAGTATGACGAACGCGGCTGGCTGACAGACATCAGCCATATCAGCGAAGGGCACCGGGTGACGGTGCACTATGGTTATGACAGTAAAGGCCGCCTCGCCAGt                                                                                                   >  6:243691/3‑149 (MQ=255)
                                                aCCGCCTCACGCACCGCACCGTGAATGGCGAAACCGCAGAGCGGTGGCAGTATGACGAACGCGGCTGGCTGACAGACATCAGCCATATCAGCGAAGGGCAGCGGGTGACGGTGCACTATGGTTATGACAGTAAAGGCCGCCTCGCCAGt                                                                                                   <  3:104559/149‑1 (MQ=255)
                                                    ccTCACGCACCGCACCGTGAATGGCGAAACCGCAGAGCGGTGGCAGTATGACGAACGCGGCTGGCTGACAGACATCAGCCATATCAGCGAAGGGCACCGGGTGACGGTGCACTATGGTTATGACAGTAAAGGCCGCCTCGCCAGTGAac                                                                                               <  1:56520/149‑1 (MQ=255)
                                                        aCGCACCGCACCGTGAATGGCGAAACCGCAGAGCGGTGGCAGTATGACGAACGCGGCTGGCTGACAGACATCAGCCATATCAGCGAAGGGCACCGGGTGACGGTGCACTATGGTTATGACAGTAAAGGCCGCCTCGCCAGTGAacac                                                                                             <  5:117992/147‑1 (MQ=255)
                                                        aCGCACCGCACCGTGAATGGCGAAACCGCAGAGCGGTGGCAGTATGACGAACGCGGCTGGCTGACAGACATCAGCCATATCAGCGAAGGGCACCGGGTGACGGTGCACTATGGTTATGACAGTAAAGGCCGCCTCGCCAGTGAACACCt                                                                                           >  2:366680/1‑149 (MQ=255)
                                                            accgcaccgTGAATGGCGAAACCGCAGAGCGGTGGCAGTATGACGAACGCGGCTGGCTGACAGACATCAGCCATATCAGCGAAGGGCACCGGGTGACGGTGCACTATGGTTATGACAGTAAAGGCCGCCTCGCCAGTGAACACCTGACg                                                                                       >  5:172439/1‑149 (MQ=255)
                                                             ccgcaccgTGAATGGCGAAACCGCAGAGCGGTGGCAGTATGACGAACGCGGCTGGCTGACAGACATCAGCCATATCAGCGAAGGGCACCGGGTGACGGTGCACTATGGTTATGACAGTAAAGGCCGCCTCGCCAGTGAACACCTGACgg                                                                                      <  2:196559/149‑1 (MQ=255)
                                                              cgcaccgTGAATGGCGAAACCGCAGAGCGGTGGCAGTATGACGAACGCGGCTGGCTGACAGACATCAGCCATATCAGCGAAGGGCACCGGGTGACGGTGCACTATGGTTATGACAGTAAAGGCCGCCTCGCCAGTGAACACCTGACGGt                                                                                     <  7:25093/149‑1 (MQ=255)
                                                               gcaccgTGAATGGCGAAACCGCAGAGCGGTGGCAGTATGACGAACGCGGCTGGCTGACAGACATCAGCCATATCAGCGAAGGGCACCgg                                                                                                                                                <  4:288288/89‑1 (MQ=255)
                                                               gcaccgTGAATGGCGAAACCGCAGAGCGGTGGCAGTATGACGAACGCGGCTGGCTGACAGACATCAGCCATATCAGCGAAGGGCACCgg                                                                                                                                                >  3:288288/1‑89 (MQ=255)
                                                                caccgTGAATGGCGAAACCGCAGAGCGGTGGCAGTATGACGAACGCGGCTGGCTGACAGACATCAGCCATATCAGCGAAGGGCACCGGGTGACGGTGCACTATGGTTATGACAGTAAAGGCCGCCTCGCCAGTGAACACCTGACGGTGc                                                                                   <  3:26134/149‑1 (MQ=255)
                                                                  ccgTGAATGGCGAAACCGCAGAGCGGTGGCAGTATGACGAACGCGGCTGGCTGACAGACATCAGCCATATCAGCGAAGGGCACCGGGTGACGGTGCACTATGGTTATGACAGTAAAGGCCGCCTCGCCAGTGa                                                                                                 <  5:2999/133‑1 (MQ=255)
                                                                  ccgTGAATGGCGAAACCGCAGAGCGGTGGCAGTATGACGAACGCGGCTGGCTGACAGACATCAGCCATATCAGCGAAGGGCACCGGGTGACGGTGCACTATGGTTATGACAGTAAAGGCCGCCTCGCCAGTGa                                                                                                 >  6:2999/1‑133 (MQ=255)
                                                                   cgTGAATGGCGAAACCGCAGAGCGGTGGCAGTATGACGAACGCGGCTGGCTGACAGACATCAGCCATATCAGCGAAGGGCACCGGGTGACGGTGCACTATGGTTATGACAGTAAAGGCCGCCTCGCCAGTGAACACCTGACGGTGcat                                                                                 >  5:71297/1‑148 (MQ=255)
                                                                           gCGAAACCGCAGAGCGGTGGCAGTATGACGAACGCGGCTGGCTGACAGACATCAGCCATATCAGCGAAGGGCACCGGGTGACGGTGCACTATGGTTATGACAGTAAAGGCCGCCTCGCCAGTGAACACCTGACGGTGCATCATCCg                                                                           >  7:139505/1‑146 (MQ=255)
                                                                            cGAAACCGCAGAGCGGTGGCAGTATGACGAACGCGGCTGGCTGACAGACATCAGCCATATCAGCGAAGGGCACCGGGTGACGGTGCACTATGGTTATGACAGTAAAGGCCGCCTCGCCAGTGAACACCTGACGGTGCATCATCCGCAGa                                                                       <  2:106738/149‑1 (MQ=255)
                                                                             gAAACCGCAGAGCGGTGGCAGTATGACGAACGCGGCTGGCTGACAGACATCAGCCATATCAGCGAAGGGCACCGGGTGACGGTGCACTATGGTTATGACAGTAAAGGCCGCCTCGCCAGTGAACACCTGACGGTGCATCATCCGCAGAc                                                                      >  1:207726/1‑149 (MQ=255)
                                                                                 ccGCAGAGCGGTGGCAGTATGACGAACGCGGCTGGCTGACAGACATCAGCCATTTCAGCGAAGGGCACCGGGTGACGGTGCACTATGGTTATGACAGTAAAGGCCGCCTCGCCAGTGAACACCTGACGGTGCATCATCCGCAGACGAAt                                                                  <  8:352123/149‑1 (MQ=255)
                                                                                 ccGCAGAGCGGTGGCAGTATGACGAACGCGGCTGGCTGACAGACATCAGCCATATCAGCGAAGGGCACCGGGTGACGGTGCACTATGGTTATGACAGTAAAGGCCGCCTCGCCAGTGAACACCTGACGGTGCATCATCCGCAGACGAAt                                                                  <  3:88382/149‑1 (MQ=255)
                                                                                 ccGCAGAGCGGTGGCAGTATGACGAACGCGGCTGGCTGACAGACATCAGCCATATCAGCGAAGGGCACCGGGTGACGGTGCACTATGGTTATGACAGTAAAGGCCGCCTCGCCAGTGAACACCTGACGGTGCATCATCCGCAGACGAAt                                                                  <  3:83359/149‑1 (MQ=255)
                                                                                       agCGGTGGCAGTATGACGAACGCGGCTGGCTGACAGACATCAGCCATATCAGCGAAGGGCACCGGGAGACGGTGCACTATGGTTATGACAGTAAAGGCCGCCTCGCCAGTGAACACCTGACGGTGCATCATCCGAAGACGAATGAACTg                                                            >  6:233737/1‑149 (MQ=255)
                                                                                              gCAGTATGACGAACGCGGCTGGCTGACAGACATCAGCCATATCAGCGAAGGGCACCGGGTGACGGTGCACTTTGGTTATGACAGTAAAGgc                                                                                                               <  1:324801/91‑1 (MQ=255)
                                                                                              gCAGTATGACGAACGCGGCTGGCTGACAGACATCAGCCATATCAGCGAAGGGCACCGGGTGACGGTGCACTATGGTTATGACAGTAAAGGCCGCCTCGCCAGTGAACACCTGACGGTGCATCATCCGCAGACGAATGAACTGCTCTgg                                                      <  5:243691/148‑1 (MQ=255)
                                                                                              gCAGTATGACGAACGCGGCTGGCAGACAGACATCAGCCATATCAGCGAAGGGCACCCGGTGACGGTGCACTATGTATATGACACTAAAGgc                                                                                                               >  2:324801/1‑91 (MQ=17)
                                                                                              gCAGTATGACGAACGCGGCGGGCTGACAGACATCAGCCATATCAGCGAAGGGCACCGGGTGACGGTGCACTATGGTTATGACAGTAAAGGCCGCCTCGCCAGTGAACACCTGACGGTGCATCATCCGCAGACGAATGAACTGCTCTgg                                                      <  5:210885/148‑1 (MQ=255)
                                                                                                  tATGACGAACGCGGCTGGCTGACAGACATCAGCCATATCAGCGAAGGGCACCGGGTGACGGTGCACTATGGTTATGACAGTAAAGGCCGCCTCGCCAGTGAACACCTGACGGTGCATCATCCGCAGACGAATGAACTGCTCTGgcagca                                                 >  1:88555/1‑149 (MQ=255)
                                                                                                       cGAACGCGGCTGGCTGACAGACATCAGCCATATCAGCGAAGGGCACCGGGTGACGGTGCACTATGGTTATGACAGTAAAGGCCGCCTCGCCAGTGAACACCTGACGGTGCATCATCCGCAGACGAATGAACTGCTCTGGCAGCATgaga                                            <  3:290003/149‑1 (MQ=255)
                                                                                                        gAACGCGGCTGGCTGACAGACATCAGCCATATCAGCGAAGGGCACCGGGTGACGGTGCACTATGGTTATGACAGTAAAGGCCGCCTCGCCAGTGAACACCTGACGGTGCATCATCCGCAGACGAATGAACTGCTCTGGCAGCATGAGAc                                           <  1:70891/149‑1 (MQ=255)
                                                                                                              ggctggctGACAGACATCAGCCATATCAGCGAAGGGCACCGGGTGACGGTGCACTATGGTTATGACAGTAAAGGCCGCCTCGCCAGTGAACACCTGACGGTGCATCATCCGCAGACGAATGAACTGCTCTGGCAGCATGAGACCAGACa                                     >  1:216199/1‑149 (MQ=255)
                                                                                                                 tggctgACAGACATCAGCCATATCAGCGAAGGGCACCGGGTGACGGTGCACTATGGTTATGACAGTAAAGGCCGCCTCGCCAGTGAACACCTGACGGTGCATCATCCGCAGACGAATGAACTGCTCTGGCAGCATgag                                             >  6:176210/1‑138 (MQ=255)
                                                                                                                 tggctgACAGACATCAGCCATATCAGCGAAGGGCACCGGGTGACGGTGCACTATGGTTATGACAGTAAAGGCCGCCTCGCCAGTGAACACCTGACGGTGCATCATCCGCAGACGAATGAACTGCTCTGGCAGCATgag                                             <  5:176210/138‑1 (MQ=255)
                                                                                                                   gctgACAGACATCAGCCATATCAGCGAAGGGCACCGGGTGACGGTGCACTATGGTTATGACAGTAAAGGCCGCCTCGCCAGTGAACACCTGACGGTGCATCATCCGCAGACGAATGAACTGCTCTGGCAGCATGAGACCAGACATGc                                  <  2:319950/147‑1 (MQ=255)
                                                                                                                   gctgACAGACATCAGCCATATCAGCGAAGGGCACCGGGTGACGGTGCACTATGGTTATGACAGTAAAGGCCGCCTCGCCAGTGAACACCTGACGGTGCATCATCCGCAGACGAATGAACTGCTCTGGCAGCATGAGACCAGACATGc                                  <  2:216199/147‑1 (MQ=255)
                                                                                                                      gacagacaTCAGCCATATCAGCGAAGGCCACCGGGTGACGGTGCACTATGGTTATGACAGTAAAGGCCGCCTCGCCAGTGAACACCTGACGGTGCATCATCCGCAGACGAATGAACTGCTCTGGCAGCATGAGACCAGACATGCGTAc                              >  6:352399/1‑148 (MQ=255)
                                                                                                                       gcggcctttactgtcataaccatagtGCACCGTCACCCGGTGCACTATGGTTATGACAGTAAAGGCCGCCTCGCCAGTGAACACCTGACGGTGCATCATCCGCAGACGAATGaa                                                               <  1:357278‑M1/88‑1 (MQ=255)
                                                                                                                       gcggcctttactgtcataaccatagtGCACCGTCACCCGGTGCACTATGGTTATGACAGTAAAGGCCGCCTCGCCAGTGAACACCTGACGGTGCATCATCCGCAGACGAATGaa                                                               >  2:357278‑M1/27‑114 (MQ=255)
                                                                                                                       acagacaTCAGCCATATCAGCGAAGGGCACCGGGTGACGGTGCACTATGGTTATGACAGTAAAGGCCGCCTCGCCAGTGAACACCTGACGGTGCATCATCCGCAGACGAATGAACTGCTCTGGCAGCATGAGACCAGACATGCGTACaa                            <  4:279618/149‑1 (MQ=255)
                                                                                                                           acaTCAGCCATATCAGCGAAGGGCACCGGGTGACGGTGCACTATGGTTATGACAGTAAAGGCCGCCTCGCCAGTGAACACCTGACGGTGCATCATCCGCAGACGAATGAACTGCTCTGGCAGCATGAGACCAGACATGCGTACAACGca                        <  8:139505/149‑1 (MQ=255)
                                                                                                                             tttactgtcataaccatagtGCACCGTCACCCGGTGCCCTATGGTTATGACAGTAAAGGCCGCCTCGCCAGTGAACACCTGACGGTGCATCATCCGCAGACGAATGAACTGCTCTGGCAGCATGAGACCAGACATGCGTACAACGca                        <  5:175886‑M1/127‑1 (MQ=255)
                                                                                                                             aTCAGCCATATCAGCGAAGGGCACCGGGTGACGGTGCACTATGGTTATGACAGTAAAGGCCGCCTCGCCAGTGAACACCTGACGGTGCATCATCCGCAGACGAATGAACTGCTCTGGCAGCATGAGACCAGACATGCGTACAACGcaca                      <  8:67317/149‑1 (MQ=255)
                                                                                                                             aTCAGCCATATCAGCGAAGGGCACCGGGTGACGGTGCACTATGGTTATGACAGTAAAGGCCGCCTCGCCAGTGAACACCTGACGGTGCATCATCCGCAGACGAATGAACTGCTCTGGCAGCATGAGACCAGACATGCGTACAACGca                        >  3:1821/1‑147 (MQ=255)
                                                                                                                              tCAGCCATATCAGCGAAGGGCACCGGGTGACGGTGCACAATGGTTATGACAGAAAAGGCCGCCTCGCCAGTGAACACCTGACGGTGCATCATCCGCAGACGAATGAACTGATCTGGCAGCATGAGACCAGACATGCGTACACCGcacac                     >  8:370615/1‑148 (MQ=255)
                                                                                                                                aGCCATATCAGCGAAGGGCACCGGGTGACGGTGCACTATGGTTATGACAGTAAAGGCCGCCTCGCCAGTGAACACCTGACGGTGCATCATCCGCAGACGAATGAACTGCTCTGGCAGCATGAGACCAGACATGCGTACAACGCACAgg                    <  6:172439/148‑1 (MQ=255)
                                                                                                                                     tatCAGCGAAGGGCACCGGGTGACGGTGCACTATGGTTATGACAGTAAAGGCCGCCTCGCCAGTGAACACCTGACGGTGCATCATCCGCAGACGAATGAACTGCTCTGGCAGCATGAGACCAGACATGCGTACAACGCACAGGGACTgg              >  5:378877/1‑149 (MQ=255)
                                                                                                                                     tatCAGCGAAGGGCACCGGGTGACGGTGCACTATGGTTATGACAGTAAAGGCCGCCTCGCCAGTGAACACCTGACGATGCATCATCCGCAGACGAATGAACTGCTCTGGCAGCATGAGACCAGACATGCGTACAACGCACAGGGACTgg              <  2:167564/149‑1 (MQ=255)
                                                                                                                                         aGCGAAGGGCACCGGGTGACGGTGCACTATGGTTATGACAGTAAAGGCCGCCTCGCCAGTGAACACCTGACGGTGCATCATCCGCAGACGAATGAACTGCTCTGGCAGCATGAGACCAGACATGCGTACAACGCACAGGGACTGGCGaa          <  6:378877/149‑1 (MQ=255)
                                                                                                                                          gCGAAGGGCACCGGGTGACGGTGCACTATGGTTATGACAGTAAAGGCCGCCTCGCCAGTGAACACCTGACGGTGCATCATCCGCAGACGAATGAACTGCTCTGGCAGCATGAGACCAGACATGCGTACAACGCACAGGGACTGGCGAAc         >  6:323463/1‑149 (MQ=255)
                                                                                                                                             aaGGGCACCGGGTGCCGGTGCACTATGGTTATGACAGTAAAGGCCGCCTCGCCAGTGAACACCTGACGGTGCATCATCCGCAGACGAATGAACTCCTCTGGCAGCATCAGACCAGACATGCGTACAACGCACAGGGACTTGCGAACCGc      >  2:108754/1‑149 (MQ=255)
                                                                                                                                                ggCACCGGGTGACGGTGCACTATGGTTATGACAGTAAAGGCCGCCTCGCCAGTGAACACCTGACGGTGCATCATCCGCAGACGAATGAACTGCTCTGGCAGCATGAGACCAGACATGCGTACAACGCACAGGGACTGGCGAACCGCTGt   <  7:8564/149‑1 (MQ=255)
                                                                                                                                                ggCACCGGGTGACGGTGCACTATGGTTATGACAGTAAAGGCCGCCTCGCCAGTGAACACCTGACGGTGCATCATCCGCAGACGAATGAACTGCTCTGGCAGCATGAGACCAGACATGCGTACAACGCACAGGGACTGGCGAACCGCTGt   <  2:207726/149‑1 (MQ=255)
                                                                                                                                                ggCACCGGGGGACGGTGCACTATGGTTATGACAGTAAAGGCCGCCTCGCCAGTGAACACCTGACGGTGCATCATCCGCAGACGAATGAACTGCTCTGGCAGCATGAGACCAGACATGCGTACAACGCACAGGGACTGGCGAACCGCTGt   <  1:366680/149‑1 (MQ=255)
                                                                                                                                                 GCACCGGGTGACGGTGCACTATGGTTATGACAGTAAAGGCCGCCTCGCCAGTGAACACCTGACGGTGCATCATCCGCAGACGAATGAACTGCTCTGgcagc                                                  >  2:256618‑M1/1‑101 (MQ=255)
                                                                                                                                                 GCACCGGGTGACGGTGCACTATGGTTATGACAGTAAAGGCCGCCTCGCCAGTGAACACCTGACGGTGCATCATCCGCAGACGAATGAACTGCTCTGgcagc                                                  <  1:256618‑M1/101‑1 (MQ=255)
                                                                                                                                                 GCACCGGGTGACGGTGCACTATGGTTATGACAGTAAAGGCCGCCTCGCCAGTGAACACCTGACGGTGCATCATCCGCAGACGAATGAACTGCTCTGGCAGCATGAGACCAGACATGCGTACAACGCACAGGGa                  >  4:322003‑M1/1‑133 (MQ=255)
                                                                                                                                                 GCACCGGGTGACGGTGCACTATGGTTATGACAGTAAAGGCCGCCTCGCCAGTGAACACCTGACGGTGCATCATCCGCAGACGAATGAACTGCTCTGGCAGCATGAGACCAGACATGCGTACAACGCACAGGGa                  <  3:322003‑M1/133‑1 (MQ=255)
                                                                                                                                                 GCACCGGGTGACGGTGCACTATGGTTATGACAGTAAAGGCCGCCTCGCCAGTGAACACCTGACGGTGCATCATCCGCAGACGAATGAACTGCTCTGGCAGCATGAGACCAGACATGCGTACAACGCACAGGGACTGGCGAACCGCTGta  >  8:340799‑M1/1‑149 (MQ=255)
                                                                                                                                                 |                                                                                                                                                    
GCAGCGAGGATGAGGGGCTGGTCACCCACTGGCACTATGACGAAGCAGACCGCCTCACGCACCGCACCGTGAATGGCGAAACCGCAGAGCGGTGGCAGTATGACGAACGCGGCTGGCTGACAGACATCAGCCATATCAGCGAAGGGCACCGGGTGACGGTGCACTATGGTTATGACAGTAAAGGCCGCCTCGCCAGTGAACACCTGACGGTGCATCATCCGCAGACGAATGAACTGCTCTGGCAGCATGAGACCAGACATGCGTACAACGCACAGGGACTGGCGAACCGCTGTA  >  NC_000913/731642‑731935

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.