New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2405627 =68 (0.780)4 (0.050) 4/242 NT 6.4% intergenic (‑555/+76) nuoA/lrhA NADH:ubiquinone oxidoreductase, membrane subunit A/transcriptional repressor of flagellar, motility and chemotaxis genes
?NC_000913 2405659 = 55 (0.690)intergenic (‑587/+44) nuoA/lrhA NADH:ubiquinone oxidoreductase, membrane subunit A/transcriptional repressor of flagellar, motility and chemotaxis genes

CAAATTTACGTATTTTTTAACATCATTGTAGCAGGTGATTTTTTTCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATGAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGA  >  NC_000913/2405480‑2405775
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gatctatcaggcgatggagagctaccataatccgtggcaatacagcccaatgtctgctccggaaggggatgattcattgttgattgaaagggatatcgagtaatcgacggacgatagataattcctgagacaatagtgtaaaaaacgAg                                                                                                                                                     <  7:58803‑M1/2‑1 (MQ=255)
 aaaTTTACGTATTTTTTAACATCATTGTAGCAGGTGATTTTTTTCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGc                                                                                                                                                    >  7:27801/1‑149 (MQ=255)
    tatcaggcgatggagagctaccataatccgtggcaatacagcccaatgtctgctccggaaggggatgattcattgttgattgaaagggatatcgagtaatcgacggacgatagataattcctgagacaatagtgtaaaaaacgAGCCGc                                                                                                                                                 <  7:254762‑M1/6‑1 (MQ=255)
     atcaggcgatggagagctaccataatccgtggcaatacagcccaatgtctgctccggaaggggatgattcattgttgattgaaagggatatcgagtaatcgacggacgatagataattcctgagacaatagtgtaaaaaacgAGCCGCt                                                                                                                                                <  8:373901‑M1/7‑1 (MQ=255)
     atcaggcgatggagagctaccataatccgtggcaatacagcccaatgtctgctccggaaggggatgattcattgttgattgaaagggatatcgagtaatcgacggacgatagataattcctgagacaatagtgtaaaaaacgAGCCGCt                                                                                                                                                <  8:276024‑M1/7‑1 (MQ=255)
       aCGTATTTTTTAACATCATTGTAGCAGGTGATTTTTTTCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTgg                                                                                                                                              >  4:94167/1‑149 (MQ=255)
            ttttttAACATCATTGTAGCTGGTGATTTTTTTCAGGCGATTATTTGTGCGTGCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGTTTTGTACGTTCTGCACTATGCGATGTAGGATTTTTACTAAAAAAAAGCCGCTGGGGttt                                                                                                                                         <  1:196879/149‑1 (MQ=255)
            ttttttAACATCATTGTAGCAGGTGATTTTTTTCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGtt                                                                                                                                          >  7:247577/1‑148 (MQ=255)
             tttttAACATCATTGTAGCAGGTGATTTTTTTCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGttt                                                                                                                                         >  1:387698/1‑148 (MQ=255)
               tttAACATCATTGTAGCAGGTGATTTTTTTCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTaa                                                                                                                                       <  7:204288/148‑1 (MQ=255)
                    catcatTGTCGCAGGGGATTTTTTTCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACAcc                                                                                                                                 <  4:115186/149‑1 (MQ=255)
                    catcatTGTAGCAGGTGATTTTTTTCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACAcc                                                                                                                                 <  2:335121/149‑1 (MQ=255)
                    catcatTGTAGCAGGTGATTTTTTTCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACAcc                                                                                                                                 >  3:338917/1‑149 (MQ=255)
                    catcatTGTAGCAGGTGATTTTTTTCAGGCGATTATTTGTGCGTTCGGGACGTGAAACTCGGGTGGTTGAAAAATGAACAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGTGGTTTAAAACAcc                                                                                                                                 >  1:292077/1‑149 (MQ=255)
                     atcatTGTAGCAGGTGATTTTTTTCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTaaaaaaaa                                                                                                                                                      <  7:234004/127‑1 (MQ=255)
                     atcatTGTAGCAGGTGATTTTTTTCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTaaaaaaaa                                                                                                                                                      >  8:234004/1‑127 (MQ=255)
                             atccgtggcaatacagcccaatgtctgctccggaaggggatgattcattgttgattgaaagggatatcgagtaatcgacggacgatagataattcctgagacaatagtgtaaaaaacgAGCCGCTGGGGTTTAAAACACCCCCAGCGGc                                                                                                                        <  7:256846‑M1/31‑1 (MQ=255)
                              gCAGGTGATTTTTTTCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCt                                                                                                                       >  6:375901/1‑149 (MQ=255)
                                    gATTTTTTTCATGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTTAAAAATTAACAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAacac                                                                                                                                  <  6:228327/132‑1 (MQ=255)
                                    gATTTTTTTCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGttt                                                                                                                  <  1:66472/148‑1 (MQ=255)
                                     aTTTTTTTCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGttttt                                                                                                                <  8:250789/149‑1 (MQ=255)
                                     aTTTTTTTCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGttttt                                                                                                                >  8:365024/1‑149 (MQ=255)
                                       ttttttCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGtttttt                                                                                                               <  8:247577/148‑1 (MQ=255)
                                        tttttCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTa                                                                                                              <  7:36032/148‑1 (MQ=255)
                                              aGGGGATTATTTGTGCTTTCGGGACGTGAAGCTCTGGTGGTTTAAAAATGAACAGTTTTGTACGTTCTGCACTATGCTATGAAGTATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTAtt                                                                                                       <  4:6032/149‑1 (MQ=255)
                                              aGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGTTTTGTACGTTCTGCACAATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTAtt                                                                                                       <  7:149000/149‑1 (MQ=255)
                                                  gATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTAAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGtc                                                                                                    >  2:139758/1‑148 (MQ=255)
                                                  gATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGATGAAAAATGAACAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTAAACAATTGtc                                                                                                    >  1:98035/1‑148 (MQ=255)
                                                    ttattTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCa                                                                                                 <  1:5830/149‑1 (MQ=255)
                                                      attTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAg                                                                                                >  4:16753/1‑148 (MQ=255)
                                                           tgCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGttt                                                                                                                  <  6:98109/125‑1 (MQ=255)
                                                           tgCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGttt                                                                                                                  >  5:98109/1‑125 (MQ=255)
                                                           tgCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATta                                                                                          >  7:174495/1‑149 (MQ=255)
                                                             cGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTAAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATtat                                                                                         <  1:139758/148‑1 (MQ=255)
                                                              gTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATtatc                                                                                        >  1:105657/1‑148 (MQ=255)
                                                               ttCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCTAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATtatcta                                                                                      >  7:259202/1‑149 (MQ=255)
                                                               ttCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATtatcta                                                                                      <  8:359449/149‑1 (MQ=255)
                                                                         gAATCTCTGGTGGTTGAAAAATGAACAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACCCCCCCAGCGGCTCGTTTTTTCCACTATTGTCTCAGGAATTATCTATCGTCCGTCg                                                                            >  2:362621/1‑149 (MQ=255)
                                                                         gAATCTCTGGTGGTTGAAAAATGAACAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATcgtccgtc                                                                             >  4:278967/1‑148 (MQ=255)
                                                                         gAATCTCTGGTGGTTGAAAAATGAACAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATcgtccgtc                                                                             <  3:278967/148‑1 (MQ=255)
                                                                           aTCTCTGGTGGTTGAAAAATGAACAGTTTTGTACGTTCTGCACAATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGAt                                                                          <  5:141698/149‑1 (MQ=255)
                                                                           aTCTCTGGTGGTTGAAAAATGAACAGTGTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGAt                                                                          <  3:2106/149‑1 (MQ=255)
                                                                              tctGGTGGTTGAAAAATGAACAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTAc                                                                       >  1:396076/1‑149 (MQ=255)
                                                                                tggtggTTGAAAAATGAACAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGAtt                                                                         <  7:365024/145‑1 (MQ=255)
                                                                                tggtggCTGAAAAATGAACAGCTTTGAACGTTCTGCACAATGCGATGAACGAATTTTACAAAACAACAGCCGCTGGGGTGTAAAACCCCCCCAGCGGCTCCTTTTTTACACTATTGTCTCAGGAATTAGCTATCGTCCGTCGATTAc                                                                       <  2:173363/147‑1 (MQ=255)
                                                                                  gtggtgGAAAAATGAACAGTCTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGa                                                                   <  1:285359/149‑1 (MQ=255)
                                                                                  gtggtTGAAAAATGAACAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTGCTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGa                                                                   >  8:290367/1‑149 (MQ=255)
                                                                                        gAAAAATGAACAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATtatcta                                                                                      >  8:274173/1‑124 (MQ=255)
                                                                                        gAAAAATGAACAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATtatcta                                                                                      <  7:267973/124‑1 (MQ=255)
                                                                                        gAAAAATGAACAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATtatcta                                                                                      <  7:274173/124‑1 (MQ=255)
                                                                                        gAAAAATGAACAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATtatcta                                                                                      >  8:267973/1‑124 (MQ=255)
                                                                                        gAAAAATGAACAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCg                                                                    >  3:173055/1‑142 (MQ=255)
                                                                                        gAAAAATGAACAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCg                                                                    <  4:173055/142‑1 (MQ=255)
                                                                                        gAAAAATGAACAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATcc                                                              <  5:375901/148‑1 (MQ=255)
                                                                                         aaaaaTGAACAGTTGTTTACGTTCTGCACTCTGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTCGGGTTTAAAACACCCCCAGCGGCTCTGTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATccc                                                             <  1:301619/148‑1 (MQ=255)
                                                                                          aaaaTGAACAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCtt                                                           <  8:27801/149‑1 (MQ=255)
                                                                                           aaaTGAACAGTTATGTACGTTCTGCACTCTGCGATGAAGGATTTTTACAAAAAATCAGCCGCTGGGGGTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTCTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCttt                                                          <  6:329686/149‑1 (MQ=255)
                                                                                                aaCAGTTTTGTACGTTCTGCACTATGAGATGCAGGATTTTTACTAAAAAAAAGCCTCTGGTGTTTAAAACACCCCCAGCGGCTCGTTATTAACACTATTGTCTCAGGACTTATCTATCGTCCGTCGATTACTCGATATCCCTTtcaat                                                      <  1:254491/148‑1 (MQ=255)
                                                                                                 aCAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTtcaatc                                                     >  8:152065/1‑148 (MQ=255)
                                                                                                  cAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTGCTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTtcaatcaa                                                   <  7:290367/149‑1 (MQ=255)
                                                                                                  cAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTtcaatcaa                                                   <  1:367814/149‑1 (MQ=255)
                                                                                                        tGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGACTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATg                                              <  2:387698/148‑1 (MQ=255)
                                                                                                          tACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCTAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATGaa                                            <  8:259202/148‑1 (MQ=255)
                                                                                                          tACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATGaa                                            <  8:1491/148‑1 (MQ=255)
                                                                                                             gTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCCATGGGGTTTAAAACCCCCCCAGCGGCTCGTTTTTTAAACTATTGTATCAGGAATTAGATATGTTCCGTCGATTACTGGATATCCATTAAAAACAAAAATGAaacaa                                        >  4:371510/1‑148 (MQ=255)
                                                                                                                 tGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATGAATCATcccc                                    >  5:296582/1‑149 (MQ=255)
                                                                                                                    aatATGCGATTAAGGATTTTTACTAAATATAATCCGCTTGGGTTTTAAACAACCCCAGCGGCTCTTTTTTTACTCTATTGTCTCAGGAATTATCTATCGTCCGTCGATTAGTCGATATGCCTTTCAATCAACAATTAATCATCCCCTTc                                 <  2:98035/147‑1 (MQ=255)
                                                                                                                      taattcctgagacaatagtgtaaaaaacgAGCCGCTGGGGGTGTTTTAAACCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATGAATCATCCCCTTCCg                               <  8:256846‑M1/120‑1 (MQ=255)
                                                                                                                      tATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATGAATCATCCCCTTCCg                               >  1:362976/1‑149 (MQ=255)
                                                                                                                          tcctgagacaatagtgtaaaaaacgAGCCGCTGGGGGTGTTTTAAACCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATcaac                                                  >  5:209757‑M1/26‑126 (MQ=255)
                                                                                                                          tcctgagacaatagtgtaaaaaacgAGCCGCTGGGGGTGTTTTAAACCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATcaac                                                  <  6:209757‑M1/101‑1 (MQ=255)
                                                                                                                           gATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATGAATCATCCCCTTCCGGAg                            >  5:1233/1‑147 (MQ=255)
                                                                                                                              gAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATGAATCATCCCCTTCCGGAGCAGa                        >  7:319662/1‑148 (MQ=255)
                                                                                                                               aaGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATGAATCATCCCCTTCCGGAGCAGACa                      >  5:120715/1‑149 (MQ=255)
                                                                                                                               aaGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATGAATCATCCCCTTCCGGAGCAGACa                      >  4:151529/1‑149 (MQ=255)
                                                                                                                                aGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATGAATCATCCCCTTCCGGAGCAGACAt                     >  3:7765/1‑149 (MQ=255)
                                                                                                                                 ggATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATGAATCATCCCCTTCCGGAGCAGACAtt                    <  3:16753/149‑1 (MQ=255)
                                                                                                                                           tAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATGAATCATCCCCTTCCGGAGCAGACATTGGGCTGTAtt          >  7:373901/1‑149 (MQ=255)
                                                                                                                                           tAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATGAATCATCCCCTTCCGGAGCAGACATTGGGCTGTAtt          <  2:362976/149‑1 (MQ=255)
                                                                                                                                               aaaaaGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATGAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCa      >  1:119105/1‑149 (MQ=255)
                                                                                                                                                   AGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATGAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGa  >  3:151529‑M1/1‑149 (MQ=255)
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CAAATTTACGTATTTTTTAACATCATTGTAGCAGGTGATTTTTTTCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATGAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGA  >  NC_000913/2405480‑2405775

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.