New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4439002 =108 (1.240)2 (0.020) 3/248 NT 2.0% coding (261/555 nt) ytfJ putative transcriptional regulator
?NC_000913 4439028 = 92 (1.130)coding (235/555 nt) ytfJ putative transcriptional regulator
Rejected: Frequency below/above cutoff threshold.

Only 100 of 124 total aligned reads displayed.

CGACGCCATTGCTATCGACAATAAACTGCGACCAGGGATAAAGCTTTTTATTACTCTCCAGACTGCTGCGCACAAACATCCCTGAACCCGGAATCGCGTCGTCGGTGTTAACAATGGTGGTGGTCTGGTAACGATCGTGCGGTAACTTCGCTGATTTAATCGCTTCAATCAGCGTCGCGTTTTTCTCTTTTGCAGAGGTGCGACCAGCAATATGTTGCAGTACTCGCACTTTTCCCACTAACTGCGCGCTGTTCCAGGTTTTGTAGCTAAACTGATCTTTATCAAGCACCAAC  >  NC_000913/4438854‑4439146
                                                                                                                                                    |                                                                                                                                                
cgACGCCATTGCTATCGACAAGAAACTGCGCCCAGGGATAACGCTTTTTATTACTATCCAGACTGCGCCGCACAAACATCCCTGAACCCGGAAGCGCGGCGGCGGTGTTACAAATGGGGGTGGGCTGGTAACCAGCGTGCGGTACCTTc                                                                                                                                                  >  3:148306/1‑149 (MQ=255)
ccgccgattggcattaccgatcggggcgagttggtgcttgataaagatcagtttagctacaaaacctggaacagcgcgcagttagtgggaaaagtgcgagtactgcaacatattgctggtcgcacctctgcaaaagagaaaaacgcgac                                                                                                                                                  <  5:125005‑M1/1‑1 (MQ=255)
  gccgattggcattaccgatcggggcgagttggtgcttgataaagatcagtttagctacaaaacctggaacagcgcgcagttagtgggaaaagtgcgagtactgcaacatattgctggtcgcacctctgcaaaagagaaaaacgcgaCGc                                                                                                                                                >  6:135986‑M1/147‑149 (MQ=255)
   ccgattggcattaccgatcggggcgagttggtgcttgataaagatcagtttagctacaaaacctggcacagcgcgcagttagtgggaaaagtgcgagtactgcaacatattgctgggcgcacctctgcaaaagagacaaacgcgaCgcg                                                                                                                                               <  4:148306‑M1/4‑2 (MQ=255)
       ttggcattaccgatcggggcgagttggtgcttgataaagatcagtttagctacaaaacctggaacagcgcgcagttagtgggaaaagtgcgagtactgcaacatattgctggtcgcacctctgcaaaagagaaaaacgcgaCGCTGAtt                                                                                                                                           >  8:12811‑M1/142‑149 (MQ=255)
       ttggcattaccgatcggggcgagttggtgcttgataaagatcagtttagctacaaaacctggaacagcgcgcagttagtgggaaaagtgcgagtactgcaacatattgctggtcgcacctctgcaaaagagaaaaacgcgaCGCTGAtt                                                                                                                                           >  6:294984‑M1/142‑149 (MQ=255)
       aTTGCTATCGACAATAAACTGCGACCAGGGATAAAGCTTTTTATTACTCTCCAGACTGCTGCGCACAAACATCCCTGAACCCGGAATCGCGTCGTCGGTGTTAACAATGGTGGTGGTCTGGTAACGATCGTGCGGTAACTTCGCTGAtt                                                                                                                                           >  8:103717/1‑149 (MQ=255)
       aTTGCTATCGACAATAAACTGCGACCAGGGATAAAGCTTTTTATTACTCTCCAGACTGCTGCGCACAAACATCCCTGAACCCGGAATCGCGTCGTCGGTGTTAACAATGGTGGTGGTCTGGTAACGATCGTGCGGTAACTTCGCTGAtt                                                                                                                                           >  7:301384/1‑149 (MQ=255)
            tATCGACAATAAACTGCGACCAGGGATAAAGCTTTTTATTACTCTCCAGACTGCTGCGCACAAACATCCCTGAACCCGGAATCGCGTCGTCGGTGTTAACAATGGTGGTGGTCTGGTAACGATCGTGCGGTAACTTCGCTGATTTAATc                                                                                                                                      >  8:337429/1‑149 (MQ=255)
            tATCGACAATAAACTGCGACCAGGGATAAAGCTTTTTATTACTCTCCAGACTGCTGCGCACAAACATCCCTGAACCCGGAATCGCGTCGTCGGTGTTAACAATGGTGGTGGTCTGGTAACGATCGTGCGGTAACTTCGCTGATTTAATc                                                                                                                                      >  7:383556/1‑149 (MQ=255)
              tCGACAATAAACTGCGACCAGGGATAAAGCTTTTTATTACTCTCCAGACTGCTGCGCACAAACATCCCTGAACCCGGAATCGCGTCGTCGGTGTTAACAATGGTGGTGGTCTGGTAACGATCGTGCGGTAACTTCGCTGATTTAATCGc                                                                                                                                    >  7:204465/1‑149 (MQ=255)
              tCGACAATAAACTGCGACCAGGGATAAAGCTTTTTATTACTCTCCAGACTGCTGCGCACAAACATCCCTGAACCCGGAATCGCGTCGTCGGTGTTAACAATGGTGGTGGTCTGGTAACGATCGTGCGGTAACTTCGCTGATTTAATCGc                                                                                                                                    <  8:18723/149‑1 (MQ=255)
                gACAATAAACTGCGACCAGGGATAAAGCTTTTTATTACTCTCCAGACTGCTGCGCACAAACATCCCTGAACCCGGAATCGCGTCGTCGGTGTTAACAATGGTGGTGGTCTGGTAACGATCGTGCGGTAACTTCGCTGATTTAATCGCt                                                                                                                                   >  4:80768/1‑148 (MQ=255)
                gACAATAAACTGCGACCAGGGATAAAGCTTTTTATTACTCTCCAGACTGCCGCGCACAAACATCCCTGAACCCGGAATCGCGTCGTCGGTGTTAACAATGGTGGTGGTCTGGTAACGATCGTGCGGTAACTTCGCTGATTTAATCGCtt                                                                                                                                  <  6:363286/149‑1 (MQ=255)
                 aCAATAAACTGCGACCAGGGATAAAGCTTTTTATTACTCTCCAGACTGCTGCGCACAAACATCCCTGAACCCGGAATCGCGTCGTCGGTGTTAACAATGGTGGTGGTCTGGTAACGATCGTGCGGTAACTTCGCTGATTTAATCGCtt                                                                                                                                  >  8:384510/1‑148 (MQ=255)
                 aCAATAAACTGCGACCAGGGATAAAGCTTTTTATTACTCTCCAGACTGCTGCGCACAAACATCCCTGAACCCGGAATCGCGTCGTCGGTGTTAACAATGGTGGTGGTCTGGTAACGATCGTGCGGTAACTTCGCTGATTTAATCGCtt                                                                                                                                  <  7:384510/148‑1 (MQ=255)
                   aaTAAACTGCGACCAGGGATAAAGCTTTTTATTACTCTCCAGACTGCTGCGCACAAACATCCCTGAACCCGGAATCGCGTCGTCGGTGTTAACAATGGTGGTGGTCTGGTAACGATCGTGCGGTAACTTCGCTGATTTAATCGCTTCaa                                                                                                                               >  1:8861/1‑149 (MQ=255)
                    aTAAACTGCGACCAGGGATAAAGCTTTTTATTACTCTCCAGACTGCTGCGCACAAACATCCCTGAACCCGGAATCGCGTCGTCGGTGTTAACAATGGTGGTGGTCTGGTAACGATCGTGCGGTAACTTCGCTGATTTAATCGCTTCAAt                                                                                                                              <  5:3923/149‑1 (MQ=255)
                        aCTGCGACCAGGGATAAAGCTTTTTATTACTCTCCAGACTGCTGCGCACAAACATCCCTGAACCCGGAATCGCGTCGTCGGTGTTAACAATGGTGGTGGTCTGGTAACGATCGTGCGGTAACTTCGCTGATTTAATCGCTTCAATCAGc                                                                                                                          <  7:103717/149‑1 (MQ=255)
                             gACCAGGGATAAAGCTTTTTATTACTCTCCAGACTGCTGCGCACAAACATCCCTGAACCCGGAATCGCGTCGTCGGTGTTAACAATGGTGGTGGTCTGGTAACGATCGTGCGGTTACTTCGCTGCTTTAATCGCTTCCATCCGCGTcgc                                                                                                                     >  8:166371/1‑149 (MQ=255)
                             gACCAGGGATAAAGCTTTTTATTACTCTCCAGACTGCTGCGCACAAACATCCCTGAACCCGGAATCGCGTCGTCGGTGTTAACAATGGTGGTGGTCTGGTAACGATCGTGCGGTAACTTCGCTGATTTAATCGCTTCAATCAGCGTcgc                                                                                                                     <  2:8861/149‑1 (MQ=255)
                                cAGGGATAAAGCTTTTTATTACTCTCCAGACTGCTGCGCACAAACATCCCTGAACCCGGAATCGCGTCGTCGGTGTTAACAATGGTGGTGGTCTGGTAACGATCGTGCGGTAACTTCGCTGATTTAATCGCTTCAATCAGCGTCGCGtt                                                                                                                  >  2:169135/1‑149 (MQ=255)
                                cAGGGATAAAGCTTTTTATTACTCTCCAGACTGCTGAGCACAAACATCCCTGAACCCGGAATCGCGTCGTAGGTGTTAACAATGGTGGTGGTCTGGTAACGATCGTGCGGTAACTTCGCTGATTTAATCGCTTCGATCAGCGTCGCGtt                                                                                                                  <  3:258601/149‑1 (MQ=255)
                                  gggATAAAGCTTTTTATTACTCTCCAGACTGCTGCGCACAAACATCCCTGAACCCGGAATCGCGTCGTCGGTGTTAACAATGGTGGTGGTCTGGTAACGATCGTGCGGTAACTTCGCTGATTTAATCGCTTCAATCAGCGTCGCGtttt                                                                                                                >  3:220670/1‑149 (MQ=255)
                                     aTAAAGCTTTTTATTACTCTCCAGACTGCTGCGCACAAACATCCCTGAACCCGGAATCGCGTCGTCGGTGTTAACAATGGTGGTGGTCTGGTAACGATCGTGCGGTAACTTCGCTGATTTAATCGCTTCAATCAGCGTCGCGTTTTtct                                                                                                             >  8:176247/1‑149 (MQ=255)
                                        aaGCTTTTTATTACTCTCCAGACTGCTGCGCACAAACATCCCTGAACCCGGAATCGCGTCGTCGGTGTTAACAATGGTGGTGGTCTGGTAACGATCGTGCGGTAACTTCGCTGATTTAATCGc                                                                                                                                    >  3:194461/1‑123 (MQ=255)
                                        aaGCTTTTTATTACTCTCCAGACTGCTGCGCACAAACATCCCTGAACCCGGAATCGCGTCGTCGGTGTTAACAATGGTGGTGGTCTGGTAACGATCGTGCGGTAACTTCGCTGATTTAATCGc                                                                                                                                    <  4:194461/123‑1 (MQ=255)
                                         aGCTTTTTATTACTCTCCAGACTGCTGCGCACAAACATCCCTGAACCCGGAATCGCGTCGTCGGTGTTAACAATGGTGGTGGTCTGGTAACGATCGTGCGGTAACTTCGCTGATTTAATCGCTTCAATCAGCGTCGCGTTTTTCTCttt                                                                                                         >  5:359960/1‑149 (MQ=255)
                                         aGCTTTTTATTACTCTCCAGACTGCTGCGCACAAACATCCCTGAACCCGGAATCGCGTCGTCGGTGTTAACAATGGTGGTGGTCTGGTAACGATCGTGCGGTAACTTCGCTGATTTAATCGCTTCAATCAGCGTCGCGTTTTTCTCttt                                                                                                         >  7:24189/1‑149 (MQ=255)
                                         aGCTTTTTATTACTCTCCAGACTGATGCGCACAAACATACCTGAACCCGGAATCGCGTCGTCGGTGTTAACAATGGTGGTGGTCTGGTAACGCTCGTGCGGTAACTTAGCTGATTTAATCGCTTCAATCAGCGTAGCGTTTTTCTCttt                                                                                                         >  1:207672/1‑149 (MQ=255)
                                           cTTTTTATTACTCTCCAGACTGCTGCGCACAAACATCCCTGAACCCGGAATCGCGTCGTCGGTGTTAACAATGGTGGTGGTCTGGTAACGATCGTGCGGTAACTTCGCTGATTTAATCGCTTCAATCAGCGTCGCGTTTTTCTCTTTTg                                                                                                       >  1:188076/1‑149 (MQ=255)
                                                 attaCTCTCCAGACTGCTGCGCACAAACATCCCTGAACCCGGAATCGCGTCGTCGGTGTTAACAATGGTGGTGGTCTGGTAACGATCGTGCGGTAACTTCGCTGATTTAATCGCTTCAATCAGCGTCGCGTTTTTCTCTTTTGCAGAgg                                                                                                 >  6:344668/1‑149 (MQ=255)
                                                 attaCTCTCCAGACTGCTGCGCACAAACATCCCTGAACCCGGAATCGCGTCGGCGGTGTTAACAATGGTGGTGGTCTGGTAACGATCGTGCGGTAACTTCGCTGATTTAATCGCTTCAATCAGCGTCGCGTTTTTCTCTTTTGCagag                                                                                                  <  2:92349/148‑1 (MQ=255)
                                                  ttaCTCTCCAGACTGCTGCGCACAAACATCCCTGAACCCGGAATCGCGTCGTCGGTGTTAACAATGGTGGTGGTCTGGTAACGATCGTGCGGTAACTTCGCTGATTTAATCGCTTCAATCAGCGTCGCGTTTTTCTCTTTTGCAGAGGt                                                                                                >  4:264426/1‑149 (MQ=255)
                                                     ctctCCAGACTGCTGCGCACAAACATCCCTGAACCCGGAATCGCGTCGTCGGTGTTAACAATGGTGGTGGTCTGGTAACGATCGTGCGGTAACTTCGCTGATTTAATCGCTTCAATCAGCGTCGCGTTTTTCTCTTTTGCAGAGGTGc                                                                                              >  6:371694/1‑148 (MQ=255)
                                                        tcCAGACTGCTGCGCACAAACATCCCTGAACCCGGAATCGCGTCGTCGGTGTTAACAATGGTGGTGGTCTGGTAACGATCGTGCGGTAACTTCGCTGATTTa                                                                                                                                         >  5:83113/1‑102 (MQ=255)
                                                        tcCAGACTGCTGCGCACAAACATCCCTGAACCCGGAATCGCGTCGTCGGTGTTAACAATGGTGGTGGTCTGGTAACGATCGTGCGGTAACTTCGCTGATTTa                                                                                                                                         <  6:83113/102‑1 (MQ=255)
                                                        tcCAGACTGCTGCGCACAAACATCCCTGAACCCGGAATCGCGTCGTCGGTGTTAACAATGGTGGTGGTCTGGTAACGATCGTGCGGTAACTTCGCTGATTTAATCGCTTCAATCAGCGTCGCGTTTTTCTCTTTTGCAGAGGTGCGAc                                                                                           >  5:365760/1‑148 (MQ=255)
                                                          cAGACTGCTGCGCACAAACATCCCTGAACCCGGAATCGCGTCGTCGGTGTTAACAATGGTGGTGGTCTGGTAACGATCGTGCGGTAACTTCGCTGATTTAATCGCTTCAATCAGCGTCGCGTTTTTCTCTTTTGCAGAGGTGCGACCa                                                                                         <  8:204465/148‑1 (MQ=255)
                                                          cAGACTGCTGCGCACAAACATCCCTGAACCCGGAATCGCGTCGTCGGTGTTAACAATGGTGGTGGTCTGGTAACGATCGTGCGGTAACTTCGCTGATTTAATCGCTTCAATCAGCGTCGCGTTTTTCTCTTTTGCAGAGGTGCGACCAg                                                                                        >  6:55200/1‑149 (MQ=255)
                                                              ctgctgCGCACAAACCTCCCGGAAACCGGAATCGCGTCGTCGGTGTTAACAATGGTGGTGGTCTGGTAACGATCGTGCGGTAACTTCGCTGATTTAATCGCTTCAATCAGCGTCGCGTTTTTCTCTTTTGCAGAGGTGCGACCAGCAat                                                                                    <  3:180311/149‑1 (MQ=255)
                                                              ctgctgCGCACAAACATCCCTGAACCCGGAATCGCGTCGTCGGTGTTAACAATGGTGGTGGTCTGGTAACGATCGTGCGGTAACTTCGCTGATTTAATCGCTTCAATCAGCGTCGCGTTTTTCTCTTTTGCAGAGGTGCGACCAGCAat                                                                                    <  3:199194/149‑1 (MQ=255)
                                                               tgctgcGCACAAACATCCCTGAACCCGGAATCGCGTCGTCGGTGTTAACAATGGTGGTGGTCTGGTAACGATCGTGCGGTAACTTCGCTGATTTAATCGCTTCAATCAGCGTCGCGTTTTTCTCTTTTGCAGAGGTGCGAc                                                                                           <  8:362035/141‑1 (MQ=255)
                                                               tgctgcGCACAAACATCCCTGAACCCGGAATCGCGTCGTCGGTGTTAACAATGGTGGTGGTCTGGTAACGATCGTGCGGTAACTTCGCTGATTTAATCGCTTCAATCAGCGTCGCGTTTTTCTCTTTTGCAGAGGTGCGACCAGCAata                                                                                   >  1:275820/1‑149 (MQ=255)
                                                               tgctgcGCACAAACATCCCTGAAACCGGAATCGCGTCGTCGGTGTTAACAATGGTGGTGGTCTGGTAACGATCGTGCGGTAACTTCGCTGATTTAATCGCTTCAATCAGCGTCGCGTTTTTCTCTTTTGCAGAGGTGCGACCAGCAatt                                                                                   >  6:230252/1‑148 (MQ=255)
                                                                 ctgcGCACAAACATCCCTGAACCCGGAATCGCGTCGTCGGTGTTAACAATGGTGGTGGTCTGGTAACGATCGTGCGGTAACTTCGCTGATTTAATCGCTTCAATCAGCGTCGCGTTTTTCTCTTTTGCAGAGGTGCGACCAGCAatat                                                                                  <  8:24189/148‑1 (MQ=255)
                                                                  tgcGCACAAACATCCCTGAACCCGGAATCGCGTCGTCGGTGTTAACAATGGTGGTGGTCTGGTAACGATCGTGCGGTAACTTCGCTGATTTAATCGCTTCAATCAGCGTCGCGTTTTTCTCTTTTGCAGAGGTGCGACCAGCAATATGt                                                                                >  5:254995/1‑149 (MQ=255)
                                                                      cacaAACATCCCTGAACCCGGAATCGCGTCGTCGGTGTTAACAATGGTGTTGGTCTGGTAACGATCGTGCGGTAACTTCGCTGATTTAATCGCTTCAATCAGCGTCGCGTTTTTCTCTTTTGCAGAGGTGCGACCAGCAATATGTTg                                                                              >  5:316958/1‑147 (MQ=255)
                                                                       acaAACATCCCTGAACCCGGAATCGCGTCGTCGGTGTTAACAATGGTGGTGGTCTGGTAACGATCGTGCGGTAACTTCGCTGATTTAATCGCTTCAATCAGCGTCGCGTTTTTCTCTTTTGCAGAGGTGCGACCAGCAATATGTTGCAg                                                                           <  5:344668/149‑1 (MQ=255)
                                                                       acaAACATCCCTGAACCCGGAATCGCGTCGTCGGTGTTAACAATGGTGGTGGTCTGGTAACGATCGTGCGGTAACTTCGCTGATTTAATCGCTTCAATCAGCGTCGCGTTTTTCTCTTTTGCAGAGGTGCGACCAGCAATATGTTGCAg                                                                           >  7:330721/1‑149 (MQ=255)
                                                                       acaAACATCCCTGAACCCGGAATCGCGTCGTCGGTGTTAACAATGGTGGTGGTCTGGTAACGATCGGGCGGTACCTTCGCTGATTTAATCGCTTCAATCAGCGTCGCGTTTTTCTCTTTTGCAGAGGTGCGACCAGCAAAATGTTGCAg                                                                           >  2:155095/1‑149 (MQ=255)
                                                                        caAACATCCCTGAACCCGGAATCGCGTCGTCGGTGTTAACAATGGTGGTGGTCTGGTAACGATCGTGCGGTAACTTCGCTGATTTAATCGCTTCAATCAGCGTCGCGTTTTTCTCTTTTGCAGAGGTGCGACCAGCAATATGTTGCAGt                                                                          <  7:267377/149‑1 (MQ=255)
                                                                         aaaCATCCCTGAACCCGGAATCGCGTCGTCGGTGTTAACAATGGTGGTGGTCTGGTAACGATCGTGCGGTAACTTCGCTGATTTAATCGCTTCAATCAGCGTCGCGTTTTTCTCTTTTGCAGAGGTGCGACCAGCAATATGTTGCAGTa                                                                         >  4:204712/1‑149 (MQ=255)
                                                                         aaaCATCCCTGAACCCGGAATCGCGTCGTCGGTGTTAACAATGGTGGTGGTCTGGTAACGATCGTGCGGTAACTTCGCTGATTTAATCGCTTCAATCAGCGTCGCGTTTTTCTCTTTTGCAGAGGTGCGACCAGCAATATGTTGCAGTa                                                                         >  6:265195/1‑149 (MQ=255)
                                                                              tCCCTGAACCCGGAATCGCGTCGTCGGTGTTAACAATGGTGGTGGTCTGGTAACGATCGTGCGGTAACTTCGCTGATTTAATCGCTTCAATCAGCGTCGCGTTTTTCTCTTTTGCAGAGGTGCGACCAGCAATATGTTGCAGTACTCg                                                                     >  1:266398/1‑148 (MQ=255)
                                                                                ccTGACCCCGGACTCGCGTCGTCGGTGTTAACAATGGTGGTGGTCTGGTAACGATCGTGCGGTAACTTCGCTGAGTTAATCGCTGCAATCAGCGTCGCGTTTTTCTCTTTTGCAGAGGTGCGACCAGCAATATGTTGCAGTACTCGCAc                                                                  <  7:166371/149‑1 (MQ=255)
                                                                                  tGAACCCGGAATCGCGTCGTCGGTGTTAACAATGGTGGTGGTCTGGTAACGATCGTGCGGTAACTTCGCTGATTTAATCGCTTCAATCAGCGTCGCGTTTTTCTCTTTTGCagag                                                                                                  <  1:16299/115‑1 (MQ=255)
                                                                                  tGAACCCGGAATCGCGTCGTCGGTGTTAACAATGGTGGTGGTCTGGTAACGATCGTGCGGTAACTTCGCTGATTTAATCGCTTCAATCAGCGTCGCGTTTTTCTCTTTTGCAGAGGTGCGACCAGCAATATGTTGCAGTACTCGCACtt                                                                >  1:228023/1‑149 (MQ=255)
                                                                                  tGAACCCGGAATCGCGTCGTCGGTGTTAACAATGGTGGTGGTCTGGTAACGATCGTGCGGTAACTTCGCTGATTTAATCGCTTCAATCAGCGTCGCGTTTTTCTCTTTTGCAGAGGTGCGACCAGCAATATGTTGCAGTACTCGCACtt                                                                >  3:332153/1‑149 (MQ=255)
                                                                                  tGAACCCGGAATCGCGTCGTCGGTGTTAACAATGGTGGTGGTCTGGTAACGATCGTGCGGTAACTTCGCTGATTTAATCGCTTCAATCAGCGTCGCGTTTTTCTCTTTTGCAGAGGTGCGACCAGCAATATGTTGCAGTACTCGCACtt                                                                >  4:359333/1‑149 (MQ=255)
                                                                                      cccGGAATCGCGTCGTCGGTGTTAACAATGGTGGTGGTCTGGTAACGATCGTGCGGTAACTTCGCTGATTTAATCGCTTCAATCAGCGTCGCGTTTTTCTCTTTTGCAGAGGTGCGACCAGCAATATGTTGCAGTACTCGCACTTTTcc                                                            <  6:254995/149‑1 (MQ=255)
                                                                                      cccGGAATCGCGTCGTCGGTGTTAACAATGGTGGTGGTCTGGTAACGATCGTGCGGTAACTTCGCTGATTTAATCGCTTCAATCAGCGTCGCGTTTTTCTCTTTTGCAGAGGTGCGACCAGCAATATGTTGCAGTACTCGCACTTTTcc                                                            <  4:220670/149‑1 (MQ=255)
                                                                                       ccGGAATCGCGTCGTCGGTGTTAACAATGGTGGTGGTCTGGTAACGATCGTGCGGTAACTTCGCTGATTTAATCGCTTCAATCAGCGGCGCGTTTTTCTCTTTTGCAGAGGTGCGACCAGCAATATGTTGCAGTACTCGCACTTTTcc                                                            >  2:41935/1‑148 (MQ=255)
                                                                                         ggAATCGCGTCGTCGGTGTTAACAATGGTGGTGGTCTGGTAACGATCGTGCGGTAACTTCGCTGATTTAATCGCTTCAATCAGCGTCGCGTTTTTCTCTTTTGCAGAGGTGCGACCAGCAATATGTTGCAGTACTCGCACTTTTCCCAc                                                         <  2:188076/149‑1 (MQ=255)
                                                                                          gAATCGCGTCGTCGGTGTTAACAATGGTGGTGGTCTGGTAACGATCGTGCGGTAACTTCGCTGATTTAATCGCTTCAATCAGCGTCGCGTTTTTCTCTTTTGCAGAGGTGCGACCAGCAATATGTTGCAGTACTCGCACTTTTCCCACt                                                        <  7:176247/149‑1 (MQ=255)
                                                                                            aTCGCGTCGTCGGTGTTAACAATGGTGGTGGTCTGGTAACGATCGTGCGGTAACTTCGCTGATTTAATCGCTTCAATCAGCGTCGCGTTTTTCTCTTTTGCAGAGGTGCGACCAGCAATATGTTGCAGTACTCGCACTTTTCCCACTaa                                                      <  5:55200/149‑1 (MQ=255)
                                                                                             tCGCGTCGTCGGTGTTAACAATGGTGGTGGTCTGGTAACGATCGTGCGGTAACTTCGCTGATTTAATCGCTTCAATCAGCGTCGCGTTTTTCTCTTTTGCAGAGGTGCGACCAGCAATATGTTGCAGTACTCGCACTTTTCCCACTAAc                                                     >  7:139331/1‑149 (MQ=255)
                                                                                              cgcgTCGTCGGTGTTAACAATGGTGGTGGTCTGGTAACGATCGTGCGGTAACTTCGCTGATTTAATCGCTTCAATCAGCGTCGCGTTTTTCTCTTTTGCAGAGGTGCGACCAGCAATATGTTGCAGTACTCGCACTTTTCCCACTAACt                                                    >  7:14509/1‑149 (MQ=255)
                                                                                                cgtcgtCGGTGTTAACAATGGTGGTGGTCTGGTAACGATCGTGCGGTAACTTCGCTGATTTAATCGCTTCAATCAGCGTCGCGTTTTTCTCTTTTGCAGAGGTGCGACCAGCAATATGTTGCAGTACTCGCACTTTTCCCACTAACTgc                                                  <  7:337429/149‑1 (MQ=255)
                                                                                                  tcgtcgGTGTTAACAATGGTGGTGGTCTGGTAACGATCGTGCGGTAACTTCGCTGATTTAATCGCTTCAATCAGCGTCGCGTTTTTCTCTTTTGCAGAGGTGCGACCAGCAATATGTTGCAGTACTCGCACTTTTCCCACTAACTgcgc                                                <  5:371694/149‑1 (MQ=255)
                                                                                                     tcgGTGTTAACAATGGTGGTGGTCTGGTAACGATCGTGCGGTAACTTCGCTGATTTAATCGCTTCAATCAGCGTCGCGTTTTTCTCTTTTGCAGAGGTGCGACCAGCAATATGTTGCAGTACTCGCACTTTTCCCACTAACTGCGCGCt                                             >  8:25308/1‑149 (MQ=255)
                                                                                                       ggTGTTAACAATGGTGGTGGTCTGGTAACGATCGTGCGGTAACTTCGCTGATTTAATCGCTTCAATCAGCGTCGCGTTTTTCTCTTTTGCAGAGGTGCGACCAGCAATATATTGCAGTACTCGCACTTTTCCCACTAACTgcgc                                                <  3:78131/144‑1 (MQ=255)
                                                                                                       ggTGTTAACAATGGTGGTGGTCTGGTAACGATCGTGCGGTAACTTCGCTGATTTAATCGCTTCAATCAGCGTCGCGTTTTTCTCTTTTGCAGAGGTGCGACCAGCAATATATTGCAGTACTCGCACTTTTCCCACTAACTgcgc                                                >  4:78131/1‑144 (MQ=255)
                                                                                                             aaCAATGGTGGTGGTCTGGTAACGATCGTGCGGTAACTTCGCTGATTTAATCGCTTCAATCAGCGTCGCGTTTTTCTCTTTTGCAGAGGTGCGACCAGCAATATGTTGCAGTACTCGCACTTTTCCCACTAACTGCGCGCTGTTCCAgg                                     >  4:167208/1‑149 (MQ=255)
                                                                                                             aaCAATGGTGGTGGGCTGGTAACGATCGTGCGGTATCTTCGCTGATTTAATCGCTTCAATCAGCGTCGCGTTTTTCTCTTTTGCAGAGGTGCGACCAGCAATATGTTGCAGTACTCGCACTTTTCCCACTAACTGCGCGCTGTTCCAg                                      <  1:391897/148‑1 (MQ=255)
                                                                                                                  tggtggttgTCTGGTAACGATCGTGCGGTAACTTCGCTGATTTAATCGCTTCAATCAGCGTCGCGTTTTTCTCTTTTGCAGAGGTGCGACCAGCAATATGTTGCAGTACTCGCACTTTTCCCACTAACTGCGCGCTGTTCCAGGTTTTg                                <  5:21532/149‑1 (MQ=255)
                                                                                                                  tggtggtggTCTGGTAACGATCGTGCGGTAACTTCGCTGATTTAATCGCTTCAATCAGCGTCGCGTTTTTCTCTTTTGCAGAGGTGCGACCAGCAATATGTTGCAGTACTCGCACTTTTCCCACTAACTGCGCGCTGTTCCAGGTTTTg                                >  2:172979/1‑149 (MQ=255)
                                                                                                                    gtggtggtCTGGTAACGATCGTGCGGTAACTTCGCTGATTTAATCGCTTCAATCAGCGTCGCGTTTTTCTCTTTTGCAGAGGTGCGCCCAGCAATATGTTGCAGTACTCGCACTTTTCCCACTAACTGCGCGCTGTTCCAGGTTTTg                                >  5:33681/1‑147 (MQ=255)
                                                                                                                    gtggtggtCTGGTAACGATCGTGCGGTAACTTCGCTGATTTAATCGCTTCAATCAGCGTCGCGTTTTTCTCTTTTGCAGAGGTGCGACCAGCAATATGTTGCAGTACTCGCACTTTTCCCACTAACTGCGCGCTGTTCCAGGTTTTGt                               <  8:383556/148‑1 (MQ=255)
                                                                                                                    gtggtggtCTGGTAACGATCGTGCGGTAACTTCGCTGATTTAATCGCTTCAATCAGCGTCGCGTTTTTCTCTTTTGCAGAGGTGCGACCAGCAATATGTTGCAGTACTCGCACTTTTCCCACTAACTGCGCGCTGTTCCAGGTTTTGt                               <  6:365760/148‑1 (MQ=255)
                                                                                                                           tCTGGTAACGATCGTGCGGTAACTTCGCTGATTTAATCGCTTCAATCAGCGTCGCGTTTTTCTCTTTTGCAGAGGTGCGACCAGCAATATGTTGCAGTACTCGCACTTTTCCCACTAACTGCGCGCTGTTCCAGGTTTTGTAGCTAAAc                       >  6:211836/1‑149 (MQ=255)
                                                                                                                            cTGGTAACGATCGTGCGGTAACTTCGCTGATTTAATCGCTTCACTCAGCGTCGCGTTTTTCTCTTTTGCAGAGGTGCGACCAGCAATATGTTGCAGTACTCGCACTTTTCCCACTAACTGCGCGCTGTTCCAGGTTTTGTATCTAAAc                       <  4:230115/148‑1 (MQ=255)
                                                                                                                             tGGTAACGATCGTGCGGTAACTTCGCTGATTTAATCGCTTCAATCAGCGTCGCGTTTTTCTCTTTTGCAGAGGTGCGACCAGCAATATGTTGCAGTACTCGCACTTTTCCCACTAACTGCGCGCTGTTCCAGGTTTTGTAGCTAAACt                      >  3:266011/1‑148 (MQ=255)
                                                                                                                             tGGTAACGATCGTGCGGTAACTTCGCTGATTTAATCGCTTCAATCAGCGTCGCGTTTTTCTCTTTTGCAGAGGTGCGACCAGCAATATGTTGCAGTACTCGCACTTTTCCCACTAACTGCGCGCTGTTCCAGGTTTTGTAGCTAAACt                      >  2:126536/1‑148 (MQ=255)
                                                                                                                              tctgcaaaagagaaaaacgcgaCGCTGATTGAAGCGATTAAATCAGCGTCGCGTTTTTCTCTTTTGCAGAGGTGCGACCAGCAATATGTTGCAGTACTc                                                                      <  6:320678‑M1/77‑1 (MQ=255)
                                                                                                                              tctgcaaaagagaaaaacgcgaCGCTGATTGAAGCGATTAAATCAGCGTCGCGTTTTTCTCTTTTGCAGAGGTGCGACCAGCAATATGTTGCAGTACTc                                                                      >  5:320678‑M1/23‑99 (MQ=255)
                                                                                                                               gTAACGATCGTGCGGTAACTTCGCTGATTTAATCGCTTCAATCAGCGTCGCGTTTTTCTCTTTTGCAGAGGTGCGACCAGCAATATGTTGCAGTACTCGCACTTTTCCCACTAACTGCGCGCTGTTCCAGGTTTTGTAGCTAAACTGAt                   <  4:187659/149‑1 (MQ=255)
                                                                                                                                tAACGATCGTGCGGTAACTTCGCTGATTTAATCGCTTCAATCAGCGTCGCGTTTTTCTCTTTTGCAGAGGTGCGACCAGCAATATGTTGCAGTACTCGCACTTTTCCCACTAACTGCGCGCTGTTCCAGGTTTTGTAGCTAAACTGATc                  <  8:207509/149‑1 (MQ=255)
                                                                                                                                tAACGATCGTGCGGTAACTTCGCTGATTTAATCGCTTCAATCAGCGTCGCGTTTTTCTCTTTTGCAGAGGTGCGACCAGCAATATGTTGCAGTACTCGCACTTTTCACACTAACTGCGCGCTGTTCCAGGTTTTGTAGCTAAACTGATc                  >  7:156810/1‑149 (MQ=255)
                                                                                                                                  aCGATCGTGCGGTAACTTCGCTGATTTAATCGCTTCAATCAGCGTCGCGTTTTTCTCTTTTGCAGAGGTGCGACCAGCAATATGTTGCAGTACTCGCACTTTTCCCACTAACTGCGCGCTGTTCCAGGTTTTGTAGCTAAACTGATCt                 <  1:172979/148‑1 (MQ=255)
                                                                                                                                    gATCGTGCGGTAACTTCGCTGATTTAATCGCTTCAATCAGCGTCGCGTTTTTCTCTTTTGCAGAGGTGCGACCAGCTATATGTTGCAGTACTCGCACTTTTCCCACTAACAGCGCGCAGTTCCAGGTTTTGTAGCTAAACTGATCtata              >  5:261468/1‑149 (MQ=255)
                                                                                                                                    gATCGTGCGGTAACTTCGCTGATTTAATCGCTTCAATCAGCGTCGCGTTTTTCTCTTTTGCAGAGGTGCGACCAGCAATATGTTGCAGTACTCGCACTTTTCCCACTAACTGCGCGCTGTTCCAGGTTTTGTAGCTAAACTGATCTTTa              <  5:265195/149‑1 (MQ=255)
                                                                                                                                        gTGCGGTAACTTCGCTGATTTAATCGCTTCAATCAGCGTCTCGTTTTTCTCTTTTGCAGAGGGGCGACCAGCAATATGTTGCAGTAGTCGCACTTTTCCCACTAACTGCGCGCTGTTCCAGGTTTTGTAGCTAAACTGATCTTTATCaa          <  1:51265/149‑1 (MQ=255)
                                                                                                                                         tGCGGTAACTTCGCTGATTTAATCGCTTCAATCAGCGTCGCGTTTTTCTCTTTTGCaga                                                                                                   >  6:134329/1‑59 (MQ=255)
                                                                                                                                          gCGGTAACTTCGCTGATTTAATCGCTTCAATCAGCGTCGCGTTTTTCTCTTTTGCAGAGGTGCGACCAGCAATATGTTGCAGTACTCGCACTTTTCCCACTAACTGCGCGCTGTTCCAGGTTTTGTAGCTAAACTGATCTTTATCAAg         >  6:125005/1‑148 (MQ=255)
                                                                                                                                             gTAACTTCGCTGATTTAATCGCTTCAATCAGCGTCGCGTTTTTCTCTTTTGCAGAGGTGCGACCAGCAATATGTTGCAGTACTCGCACTTTTCCCACTAACTGCGCGCTGTTCCAGGTTTTGTAGCTAAACTGATCTTTATCAAGCAc      >  2:179569/1‑148 (MQ=255)
                                                                                                                                                gcgaCGCTGATTGAAGCGATTAAATCAGCGTCGCGTTTTTCTCTTTTGCAGAGGTGCGACCATCAATATGTTGCAGTACTCGCACTTTTCCCACTAACTGCGCGCTGGTCCAGGTTTTGTAGCTAAACGGATCTTTATCAAGCACCAAc  <  6:32096‑M1/145‑1 (MQ=255)
                                                                                                                                                aCTTCGCTGATTTAATCGCTTCAATCAGCGTCGCGTTTTTCTCTTTTGCAGAGGTGCGACCAGCAATATGTTGCAGTACTCGCACTTTTCCCACTAACTGCGCGCTGTTCCAGGTTTTGTAGCTAAACTGATCTTTATCAAGCACCaa   <  8:14509/148‑1 (MQ=255)
                                                                                                                                                  ttCGCTGATTTAATCGCTTCAATCAGCGTCGCGTTTTTCTCTTTTGCAGAGGTGCGACCAGCAATATGTTGCAGTACTCGCACTTTTCCCACTAACTGCGCGCTGTTCCAGGTTTTGTAGCTAAACTGATCTTTATCa           >  1:353115/1‑138 (MQ=255)
                                                                                                                                                  ttCGCTGATTTAATCGCTTCAATCAGCGTCGCGTTTTTCTCTTTTGCAGAGGTGCGACCAGCAATATGTTGCAGTACTCGCACTTTTCCCACTAACTGCGCGCTGTTCCAGGTTTTGTAGCTAAACTGATCTTTATCa           <  2:353115/138‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                
CGACGCCATTGCTATCGACAATAAACTGCGACCAGGGATAAAGCTTTTTATTACTCTCCAGACTGCTGCGCACAAACATCCCTGAACCCGGAATCGCGTCGTCGGTGTTAACAATGGTGGTGGTCTGGTAACGATCGTGCGGTAACTTCGCTGATTTAATCGCTTCAATCAGCGTCGCGTTTTTCTCTTTTGCAGAGGTGCGACCAGCAATATGTTGCAGTACTCGCACTTTTCCCACTAACTGCGCGCTGTTCCAGGTTTTGTAGCTAAACTGATCTTTATCAAGCACCAAC  >  NC_000913/4438854‑4439146

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.