BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 4488423	105 (1.210)	4 (0.050)	7/240	NT	4.0%	intergenic (+23/+138)	lptG/yjgR	lipopolysaccharide export ABC permease/DUF853 family protein with NTPase fold
*	?	NC_000913	= 4488427	98 (1.240)	4 (0.050)	7/240	NT	4.0%	intergenic (+27/+134)	lptG/yjgR	lipopolysaccharide export ABC permease/DUF853 family protein with NTPase fold
Rejected: Frequency below/above cutoff threshold.

Only 100 of 168 total aligned reads displayed.

TACTGGACCAGATCTTCGGCCCGCTGACGTTGGTTTATGGCATCCCGCCGATCATCGGCGCACTGTTGCCAAGCGCCAGCTTCTTCTTAATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAGGCAAAGACAAATCTCGCCTGACTTACCTTCTTC  >  NC_000913/4488279‑4488571

tACTGGACCAGATCTTCGGCCCGCTGACGTTGGTTTATGGCATCCCGCCGATCATCGGCGCACTGTTGCCAAGCGCCAGCTTCTTCTTAATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGaaa                                                                                                                                                  <  7:189745/149‑1 (MQ=255)

tACTGGACCAGATCTTCGGCCCGCTGACGTTGGTTTATGGCATCCCGCCGATCATCGGCGCACTGTTGCCAAGCGCCAGCTTCTTCTTAATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGa                                                                                                                                                    >  3:85015/1‑147 (MQ=255)

       tgtaagtcaggcgagatttgtctttgcctgatgagtcgcttgcgcttcttatcattcccaccccactgcaatatattgaattttaattatttttcagtaatgaacgaagcacactttgctagcaatAATAAAGGGAGCGAAAGCTCCCt                                                                                                                                           >  1:258878‑M1/127‑149 (MQ=255)

       ccAGATCTTCGGCCCGCTGACGTTGGTTTATGGCATCCCGCCGATCATCGGCGCACTGTTGCCAAGCGCCAGCTTCTTCTTAATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAgctccct                                                                                                                                           >  4:260647‑M2/1‑142 (MQ=255)

        cAGATCTTCGGCCCGCTGACGTTGGTTTATGGCATCCCGCCGATCCTCGGCGCACTGTTGCCAAGCGCCAGCTTCTTCTTAATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAgctccctt                                                                                                                                          <  7:169319‑M2/149‑9 (MQ=255)

        cAGATCTTCGGCCCGCTGACGTTGGTTTATGGCATCCCGCCGATCATCGGCGCACTGTTGCCAAGCGCCAGCTTCTTCTTAATCAGCCTGTGGGTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAgctccctt                                                                                                                                          <  5:185340‑M2/149‑9 (MQ=255)

        cAGATCTTCGGCCCGCTGACGTTGGTTTATGGCATCCCGCCGATCATCGGCGCACTGTTGCCAAGCGCCAGCTTCTTCTTAATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAgctccctt                                                                                                                                          <  5:35408‑M2/149‑9 (MQ=255)

          gATCTTCGGCCCGCTGACGTTGGTTTATGGCATCCCGCCGATCATCGGCGCACTGTTGCCAAGCGCCAGCTTCTTCTTAATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAgctcccttta                                                                                                                                        <  4:120699‑M2/149‑11 (MQ=255)

            tCTTCGGCCCGCTGACGTTGGTTTATGGCATCCCGCCGATCATCGGCGCACTGTTGCCAAGCGCCAGCTTCTTCTTAATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAgctccctttat                                                                                                                                       >  4:85015‑M2/1‑137 (MQ=255)

                cGGCCCGCTGACGTTGGTTTATGGCATCCCGCCGATCATCGGCGCACTGTTGCCAAGCGCCAGCTTCTTCTTAATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCTTTCgctccctttatt                                                                                                                                      >  7:51828‑M2/1‑133 (MQ=255)

                cGGCCCGCTGACGTTGGTTTATGGCATCCCGCCGATCATCGGCGCACTGTTGCCAAGCGCCAGCTTCTTCTTAATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTtattat                                                                                                                                    <  3:22031/147‑1 (MQ=255)

                cGGCCCGCTGACGTTGGTTTATGGCATCCCGCCGATCATCGGCGCACTGTTGCCAAGCGCCAGCTTCTTCTTAATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTattatt                                                                                                                                   <  6:359172/148‑1 (MQ=255)

                  gCCCGCTGACGTTGGTTTATGGCATCCCGCCGATCATCGGCGCACTGTTGCCAAGCGCCAGCTTCTTCTTAATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGt                                                                                                                                 >  1:163682/1‑148 (MQ=255)

                  gCCCGCTGACGTTGGTTTATGGCATCCCGCCGATCATCGGCGCACTGTTGCCAAGCGCCAGCTTCTTCTTAATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGt                                                                                                                                 >  3:345899/1‑148 (MQ=255)

                   cccGCTGACGTTGGTTTATGGCATCCCGCCGATCATCGGCGCACTGTTGCCAAGCGCCAGCTTCTTCTTAATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTa                                                                                                                               <  4:197252/149‑1 (MQ=255)

                      gCTGACGTTGGTTTATGGCATCCCGCCGATCATCGGCGCACTGTTGCCAAGCGCCAGCTTCTTCTTAATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCa                                                                                                                            <  1:256120/149‑1 (MQ=255)

                       cTGACGTTGGTTTATGGCATCCCGCCGATCATCGGCGCACTGTTGCCAAGCGCCAGCTTCTTCTTAATCAGCCGGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTTTTGTTAGCa                                                                                                                            >  6:315896/1‑148 (MQ=255)

                          aCGTTGGATTATGGCATCCCGCCGATCATCGGCGCACTGTTGCCAAGCGCCAGCTTCTTCTTAATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGCACGAATAAAGCGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAgt                                                                                                                        <  5:371999/149‑1 (MQ=255)

                             ttGGTTTATGGCATCCCGCCGATCATCGGCGCACTGTTGCCAAGCGCCAGCTTCTTCTTAATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGtgtg                                                                                                                     >  5:36228/1‑149 (MQ=255)

                               ggTTTATGGCATCCCGCCGATCATCGGCGCACTGTTGCCAAGCGCCAGCTTCTTCTTAATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCt                                                                                                                   >  2:259829/1‑149 (MQ=255)

                                gTTTATGGCATCCCGCCGATCATCGGCGCACTGTTGCCAAGCGCCAGCTTCTTCTTAATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCtt                                                                                                                  >  7:183158/1‑149 (MQ=255)

                                    aTGGCATCCCGCCGATCATCGGCGCACTGTTGCCAAGCGCCAGCTTCTTCTTAATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGt                                                                                                               <  8:183158/148‑1 (MQ=255)

                                     tGGCATCCCGCCGATCATCGGCGCACTGTTGCCAAGCGCCAGCTTCTTCTTAATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGtt                                                                                                              <  2:240585/148‑1 (MQ=255)

                                        cATCCCGCCGATCATCGGCGCACTGTTGCCAAGCGCCAGCTTCTTCTTAATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCAtt                                                                                                          >  7:166882/1‑149 (MQ=255)

                                         aTCCCGCCGATCATCGGCGCACTGTTGCCAAGCGCCAGCTTCTTCTTAATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTc                                                                                                         >  6:125777/1‑149 (MQ=255)

                                          tCCCGCCGATCATCGGCGCACTGTTGCCAAGCGCCAGCTTCTTCTTAATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTcc                                                                                                        >  6:371788/1‑149 (MQ=255)

                                              gccgATCATCGGCGCACTGTTGCCAAGCGCCAGCTTCTTCTTAATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGaa                                                                                                    <  2:161384/149‑1 (MQ=255)

                                                     atcGGCGCACTGTTGCCAAGCGCCAGCTTCTTCTTAATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAaataa                                                                                              <  8:166882/148‑1 (MQ=255)

                                                         gcgcACTGTTGCCAAGCGCCAGCTTCTTCTTAATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTaa                                                                                          >  6:203448/1‑148 (MQ=255)

                                                            cACTGTTGCCAAGCGCCAGCTTCTTCTTAATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAAtt                                                                                      <  3:238861/149‑1 (MQ=255)

                                                              cTGTTGCCAAGCGCCAGCTTCTTCTTAATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCa                                                                                    <  7:140340/149‑1 (MQ=255)

                                                               tGTTGCCAAGCGCCAGCTTCTTCTTAATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCaa                                                                                   >  7:330025/1‑149 (MQ=255)

                                                                   gCCAAGCGCCAGCTTCTTCTTAATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAatata                                                                               >  3:122272/1‑149 (MQ=255)

                                                                    ccAAGCGCCAGCTTCTTCTTAATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAatatat                                                                              <  5:143280/149‑1 (MQ=255)

                                                                     cAAGCGCCAGCTTCTTCTTAATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATAtt                                                                             >  7:243952/1‑149 (MQ=255)

                                                                      aaGCGCCAGCTTCTTCTTAATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCTTTCgctccctttattcgttcattcggttacgattttctc                                                                                                              <  2:244907‑M2/115‑37 (MQ=255)

                                                                      aaGCGCCAGCTTCTTCTTAATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTg                                                                            <  1:226955/149‑1 (MQ=255)

                                                                      aaGCGCCAGCTTCTTCTTAATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTg                                                                            <  8:22796/149‑1 (MQ=255)

                                                                        gcgcCAGCTTCTTCTTAATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAAt                                                                                       >  1:186798/1‑136 (MQ=255)

                                                                        gcgcCAGCTTCTTCTTAATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAAt                                                                                       <  2:186798/136‑1 (MQ=255)

                                                                         cgcCAGCTTCTTCTTAATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAg                                                                         <  7:191281/149‑1 (MQ=255)

                                                                           ccAGCTTCTTCTTAATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAgtg                                                                       >  3:101563/1‑149 (MQ=255)

                                                                           ccAGCTTCTTCTTAATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAgtg                                                                       >  5:164121/1‑149 (MQ=255)

                                                                            cAGCTTCTTCTTAATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAgtgg                                                                      >  4:371168/1‑149 (MQ=255)

                                                                             aGCTTCTTCTTAATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAgtggg                                                                     <  2:539/149‑1 (MQ=255)

                                                                             aGCTTCTTCTTAATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAgtggg                                                                     <  1:259829/149‑1 (MQ=255)

                                                                               cttcttcttAATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAgtggggt                                                                   >  3:62138/1‑149 (MQ=255)

                                                                               cttcttcttAATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAgtggggt                                                                   <  4:62138/149‑1 (MQ=255)

                                                                               cttcttcttAATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAgtggg                                                                     <  5:168396/147‑1 (MQ=255)

                                                                               cttcttcttAATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAgtggg                                                                     >  6:168396/1‑147 (MQ=255)

                                                                                  cttcttAATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAgtggggtgg                                                                 <  8:178611/148‑1 (MQ=255)

                                                                                   ttcttAATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTc                                                                                                         <  2:72681/107‑1 (MQ=255)

                                                                                   ttcttAATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTc                                                                                                         >  1:72681/1‑107 (MQ=255)

                                                                                    tcttAATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCa                                                              >  5:163696/1‑149 (MQ=255)

                                                                                      ttAATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCtttcgctccctt                                                                                                                                          >  1:34946‑M1/1‑59 (MQ=255)

                                                                                        aaTCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATg                                                            <  8:243952/147‑1 (MQ=255)

                                                                                        aaTCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGa                                                           >  7:40560/1‑148 (MQ=255)

                                                                                             gCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGAc                                                     >  7:348691/1‑149 (MQ=255)

                                                                                               cTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGAcgc                                                   <  6:36228/149‑1 (MQ=255)

                                                                                               atttttcaggaatgaacgaagcacactttgctaacaatAATAAAGGGAGCTTTCGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAg                                                       <  2:64735‑M1/107‑1 (MQ=255)

                                                                                               atttttcaggaatgaacgaagcacactttgctaacaatAATAAAGGGAGCTTTCGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAg                                                       >  1:64735‑M1/39‑145 (MQ=255)

                                                                                                 gtgGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAgtggg                                                                     >  2:146308/1‑129 (MQ=255)

                                                                                                 gtgGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAgtggg                                                                     <  1:146308/129‑1 (MQ=255)

                                                                                                    gCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTTTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCa                                               <  5:201394/148‑1 (MQ=255)

                                                                                                    gCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCa                                                                                    <  7:372469/111‑1 (MQ=255)

                                                                                                      tGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAAGATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCg                                            >  1:54547/1‑149 (MQ=255)

                                                                                                             gagaAAATCGTAACCGAATGAACGAATAAAGGGAGCgaaagctccctttattcgttcattcggttacgattttctcattaacagccacaggctgattaagaagaagctggcgctt                                                                       >  1:244907‑M1/1‑36 (MQ=255)

                                                                                                               gaAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTTCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATAGCAGTGGGGTGGGCATGATAAGACGCTCCAGCGTCTCATCAg                                   >  8:350427/1‑149 (MQ=255)

                                                                                                               gaAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAg                                   <  6:164121/149‑1 (MQ=255)

                                                                                                               gaAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAg                                   <  2:345820/149‑1 (MQ=255)

                                                                                                               gaAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTGCTTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGCCATGATAAGACGCGCCAGCGTCGCATCa                                    <  3:38200/148‑1 (MQ=255)

                                                                                                                      gTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAGGCAAAg                             <  5:203448/148‑1 (MQ=255)

                                                                                                                                 aaCGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAGGCAAAGACAAATCTCGcc                 <  6:334066/149‑1 (MQ=255)

                                                                                                                                 aaCGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAGGCAAAGACAAATCTCGc                  <  8:330025/148‑1 (MQ=255)

                                                                                                                                  aCGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAgtggggtgg                                                                 >  7:76695/1‑100 (MQ=255)

                                                                                                                                  aCGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAgtggggtgg                                                                 <  8:76695/100‑1 (MQ=255)

                                                                                                                                  aCGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAGGCAAAGACAAATCTCGCCt                <  5:334225/149‑1 (MQ=255)

                                                                                                                                   cGAATAAAGGGAGCgaaagctccctttattcgttcattcggttacgattttctcattaacagccacaggctgattaagaagaagctggcgcttggcaacagtgcgtcgatgatcggcgggatgccataaaccaacgtcagcgggccg                 >  2:42203‑M1/1‑14 (MQ=255)

                                                                                                                                    gAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGAGGGCATGATAAGACGCGCCAGCGTCGCATCAGGCAAAGACAAATCTCGCCTGa              >  6:120683/1‑149 (MQ=255)

                                                                                                                                      aTAAAGGGAGCtttcgctccctttattcgttcattcggttacgattttctcattaacagccacaggctgattaagaagaagctggcgcttggcaacagtgcgccgatgatcggcgggatgccataaaccaacgtcagcgggccgaaga             >  4:85015‑M1/1‑11 (MQ=255)

                                                                                                                                      aTAAAGGGAGCtttcgctccctttattcgttcattcggttacgattttctcattaacagccacaggctga                                                                                           <  2:90352‑M1/70‑60 (MQ=255)

                                                                                                                                      aTAAAGGGAGCtttcgctccctttattcgttcattcggttacgattttctcattaacagccacaggctga                                                                                           >  1:90352‑M1/1‑11 (MQ=255)

                                                                                                                                      aTAAAGGGAGCgaaagctccctttattcgttcattcggttacgattttctcattaacagccacaggctgattaagaagaagctggcgcttggcaacagtgcgccgatgatcggcgggatgccataaaccaacgtcagcgggccg                 >  4:81501‑M1/1‑11 (MQ=255)

                                                                                                                                       tAAAGGGAGCtttcgctccctttattcgttcattcggttacgattttctcattaacagccacaggctgattaagaagaagctggcgcttggcaacagtgcgccgatgatcggcgggatgccataaaccaacgtcagcgggccgaagatc           <  5:359172‑M1/149‑140 (MQ=255)

                                                                                                                                       tAAAGGGAGCtttcgctccctttattcgttcattcggttacgattttctcattaacagccacaggctgattaagaagaagctggcgcttggcaacagtgcgccgatgatcggcgggatgccataaaccaacgtcagcgggccgaagatc           <  4:120699‑M1/149‑140 (MQ=255)

                                                                                                                                       TAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAAAATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAGGCAAAGACAAATCTCGCCTGACt            <  2:226100‑M1/148‑1 (MQ=255)

                                                                                                                                         aaGGGAGCtttcgctccctttattcgttcattcggttacgattttctcattaacagccccaggctgattaagaagaagctggctcttggcaacagtgcgccgatgatcggcgggatgccataaaccaacgtcagcgggcccaagatctg         >  5:356132‑M1/1‑8 (MQ=255)

                                                                                                                                         aaGGGAGCtttcgctccctttattcgttcattcggttacgattttctcattaacagccacaggctgattaagaagaagctggcgcttggcaacagtgcgccgatgatcggcgggatgccataaaccaacgtcagcgggccgaagatctg         <  1:320990‑M1/149‑142 (MQ=255)

                                                                                                                                         aaGGGAGCtttcgctccctttattcgttcattcggttacgattttctcattaacagccacaggctgattaagaagaagctggcgcttggcaacagtgcgccgatgatcggcgggatgccataaaccaacgtcagcgggccgaagatctg         >  2:158615‑M1/1‑8 (MQ=255)

                                                                                                                                         aaGGGAGCtttcgctccctttattcgttcattcggttacgattttctcattaacacccacaggctgattaagaagaagctggcgcttggcaacagtgcgccgatgatcggcgggatgccataaaccaacgtcagcgggccgaagatctg         <  5:185340‑M1/149‑142 (MQ=255)

                                                                                                                                         aaGGGAGCGAAAgctccctttattcgttcattcggttacgattttctcattaacagccacaggctgattaa                                                                                       <  2:34946‑M2/71‑60 (MQ=255)

                                                                                                                                         aaGGGAGCGAAAgctccctttattcgttcattcggttacgattttctcattaacagccacaggctgattaa                                                                                       >  1:34946‑M2/1‑12 (MQ=255)

                                                                                                                                         AAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAGGCAAAGACAAATCTCGCCTGACTTAc         <  4:18907‑M1/149‑1 (MQ=255)

                                                                                                                                         AAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAGGCAAAGACAAATCTCGCCTGACTTAc         <  3:118619‑M1/149‑1 (MQ=255)

                                                                                                                                          aGGGAGCtttcgctcactttattcgttcattcggttacgattttctcattaacagccacaggctgattaagaagaagctggcgcttggcaacagtgagccgatgatcgtcgggatgccataaaccaacgtcagcgggccgacgagctgg        <  4:7286‑M1/149‑143 (MQ=255)

                                                                                                                                            ggAGCtttcgctccctttattcgttcattcggttacgattttctcattaacagccacaggctgattaagaagaagctggtgcttggcaacagtgcgccgatgatcggcgggatgccataaaccaacgtcagcgggccgaagatctggtc      <  2:258572‑M1/149‑145 (MQ=255)

                                                                                                                                            GGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAgtggg                                                                     >  7:379721‑M1/1‑86 (MQ=255)

                                                                                                                                             GAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAGGCAAAGACAAATCTCGCCTGACTTACcttc     >  5:369621‑M1/1‑149 (MQ=255)

                                                                                                                                                ctttcgctccctttattcgttcattcggttacgattttctcattaactgccacaggctgattaagaataagctggcgcttggcaacagtgcgccgatgatcggcgggatgccataacccaacgtcagcgggccgaagatctggtccagt  <  4:176837‑M1/149‑149 (MQ=255)

                                                                                                                                                ctttcgatccctttattcgttcattcggttacgattttctcattaacagccacaggctgatgaagaagaagctggcgcttggcaacagtgcgccgatgatcggcgggattccataaaccaacgtcagcgggccgaagatctggtccac   >  5:197074‑M1/1‑1 (MQ=255)

TACTGGACCAGATCTTCGGCCCGCTGACGTTGGTTTATGGCATCCCGCCGATCATCGGCGCACTGTTGCCAAGCGCCAGCTTCTTCTTAATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAGGCAAAGACAAATCTCGCCTGACTTACCTTCTTC  >  NC_000913/4488279‑4488571

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.