New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 4520639115 (1.320)4 (0.050) 4/252 NT 3.5% intergenic (‑315/+32) yjhU/yjhF putative DNA‑binding transcriptional regulator; KpLE2 phage‑like element/putative transporter
?NC_000913 = 4520652 114 (1.370)intergenic (‑328/+19) yjhU/yjhF putative DNA‑binding transcriptional regulator; KpLE2 phage‑like element/putative transporter
Rejected: Frequency below/above cutoff threshold.

Only 100 of 128 total aligned reads displayed.

GCTCCGGCTTTACAGTATTACTGAGAATACACCCATCAAGCATAATCGAAGGTTCAATATCGCCCCTTTTTGATCGCCAGCGATTCGTCACCGTGCAGACGGTTGCCGTCACTCACTAAATTATGGGGGACAGTGAACAACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACTGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGCCAAAAAAGTCTTTAATCATCCAGAAAC  >  NC_000913/4520504‑4520798
                                                                                                                                                    |                                                                                                                                                  
gCTCCGGCTTTACAGTATTACTGAGAATACACCCATCAAGCATAATCGAAGGTTCAATATCGCCCCTTTTTGATCGCCAGCGATTCGTCACCGTGCAGACGGTTGCCGTCACTCACTAAATTATGGGGGACAGTGAACAACAGGTTGGc                                                                                                                                                    >  8:219519/1‑149 (MQ=255)
  tCCGGCTTTACAGTATTACTGAGAATACACCCATCAAGCATAATCGAAGGTTCAATATCGCCCCTTTTTGATCGCCAGCGATTCGTCACCGTGCAGACGGTTGCCGTCACGCACTAAAGTATGGGGGACAGTGAACAACAGGTTGGCt                                                                                                                                                   <  1:382776‑M2/148‑2 (MQ=255)
      gCTTTACAGTATTACTGAGAATACACCCATCAAGCATAATCGAAGGTTCAATATCGCCCCTTTTTGATCGCCAGCGATTCGTCACCGTGCAGACGGTTGCCGTCACTCACTAAATTATGGGGGACAGTGAACAACAGGTTGGCtcactg                                                                                                                                              >  4:22486‑M2/1‑143 (MQ=255)
      gCTTTACAGTATTACTGAGAATACACCCATCAAGCATAATCGAAGGTTCAATATCGCCCCTTTTTGATCGCCAGCGATTCGTCACCGTGCAAACGGTTGCCGTCACTCACTAAATTATGGGGGACAGTGAACAACAGGTTGGCtcactg                                                                                                                                              <  5:265033‑M2/149‑7 (MQ=255)
        tttACAGTATTACTGAGAATACCCACATCAAGCATAATCGAAGGTTCAATATCGCCCCTTTTTGATCGAAAGCGATTCGTCACCGTGCCGACGGTTGCCGTCACTCACTAAATTATGGGGGACAGTGAACACCAGCTTGGCtcactgt                                                                                                                                             <  4:224097‑M2/148‑8 (MQ=255)
          tACAGTATTACTGAGAATACACCCATCAAGCATAATCGAAGGTTCAATATCGCCCCTTTTTGATCGCCAGCGATTCGTCACCGTGCAGACGGTTGCCGTCACTCACTAAATTATGGGGGACAGTGAACAACAGGTTGGCTCACTGGc                                                                                                                                            <  8:242694/147‑1 (MQ=255)
           aCAGTATTACTGAGAATACACCCATCAAGCATAATCGAAGGTTCAATATCGCCCCTTTTTGATCGCCAGCGATTCGTCACCGTGCAGACGGTTGCCGTCACTCACTAAATTATGGGGGACAGTGAACAACAGGTTGGCTCACTGGc                                                                                                                                            >  8:105601/1‑146 (MQ=255)
           aCAGTATTACTGAGAATACACCCATCAAGCATAATCGAAGGTTCAATATCGCCCCTTTTTGATCGCCAGCGATTCGTCACCGTGCAGACGGTTGCCGTCACACACTAAATTATGGGGGACAGTGAACAACAGGTTGGCTCACTGGc                                                                                                                                            >  5:331255/1‑146 (MQ=255)
               tATTACTGAGAATACACCCATCAAGCATAATCGAAGGTTCAATATCGCCCCTTTTTGATCGCCAGCGATTCGTCACCGTGCAGACGGTTGCCGTCACTCACTAAATTATGGGGGACAGTGAACAACAGGTTGGCTCACTGGCAAGAAcc                                                                                                                                     >  3:149471/1‑149 (MQ=255)
                 ttACTGAGAATACACCCATCAAGCATAATCGAAGGTTCAATATCGCCCCTTTTTGATCGCCAGCGATTCGTCACCGTGCAGACGGTTGCCGTCACTCACTAAATTATGGGGGACAGTGAACAACAGGTTGGCTCACTGGCAAGAAccc                                                                                                                                    <  2:59362/148‑1 (MQ=255)
                   aCTGAGAATACACCCATCAAGCATAATCGAAGGTTCAATATCGCCCCTTTTTGATCGCCAGCGATTCGTCACCGTGCAGACGGTTGCCGTCACTCACTAAATTATGGGGGACAGTGAACAACAGGTTGGCTCACTGGCAAGAACCCGa                                                                                                                                  <  7:226428/148‑1 (MQ=255)
                    cTGAGAATACACCCATCAAGCATAATCGAAGGTTCAATATCGCCCCTTTTTGATCGCCAGCGATTCGTCACCGTGCAGACGGTTGCCGTCACTCACTAAATTATGGGGGACAGTGAACAACAGGTTGGCTCACTGGCAAGAACCCGAtt                                                                                                                                <  4:226200/149‑1 (MQ=255)
                     tGAGAATACACCCATCAAGCATAATCGAAGGTTCAATATCGCCCCTTTTTGATCGCCAGCGATTCGTCACCGTGCAGACGGTTGCCGTCACTCACTAAATTATGGGGGACAGTGAACAACAGGTTGGCTCACTGGCAAGAACCCGATta                                                                                                                               >  7:111120/1‑149 (MQ=255)
                       agaATACACCCATCAAGCATAATCGAAGGTTCAATATCGCCCCTTTTTGATCGCCAGCGATTCGTCACCGTGCAGACGGTTGCCGTCACTCACTAAATTATGGGGGACAGTGAACAACAGGTTGGCTCACTGGCAAGAACCCGATtata                                                                                                                             <  7:395323/149‑1 (MQ=255)
                       agaATACACCCATCAAGCATAATCGAAGGTTCAATATCGCCCCTTTTTGATCGCCAGCGATTCGTCACCGTGCAGACGGTTGCCGTCACTCACTAAATTATGGGGGACAGTGAACAACAGGTTGGCTCACTGGCAAGAACCCGATtat                                                                                                                              >  7:201569/1‑148 (MQ=255)
                           tACACCCATCAAGCATAATCGAAGGTTCAATATCGCCCCTTTTTGATCGCCAGCGATTCGTCACCGTGCAGACGGTTGCCGTCACTCACTAAATTATGGGGGACAGTGAACAACAGGTTGGCTCACTGGCAAGAACCCGATTATaaaa                                                                                                                          >  6:17245/1‑148 (MQ=255)
                              acCCATCAAGCATAATCGAAGGTTCAATATCGCCCCTTTTTGATCGCCAGCGATTCGTCACCGTGCAGACGGTTGCCGTCACTCACTAAATTATGGGGGACAGTGAACAACAGGTTGGCTCACTGGCAAGATCCCGATTATAAAACt                                                                                                                        >  7:368251/1‑147 (MQ=255)
                              acCCATCAAGCATAATCGAAGGTTCAATATCGCCCCTTTTTGATCGCCAGCGATTCGTCACCGTGCAGACGGTTGCCGTCACTCACTAAATTATGGGGGACAGTGAACAACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACt                                                                                                                        >  3:274683/1‑147 (MQ=255)
                               cccATCAAGCATAATCGAAGGTTCAATATCGCCCCTTTTTGATCGCCAGCGATTCGTCACCGTGCAGACGGTTGCCGTCACTCACTAAATTATGGGGGACAGTGAACAACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAg                                                                                                                     <  5:231713/149‑1 (MQ=255)
                               cccATCAAGCATAATCGAAGGTTCAATATCGCCCCTTTTTGATCGCCAGCGATTCGTCACCGTGCAGACGGTTGCCGTCACTCACTAAATTATGGGGGACAGTGAACAACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAg                                                                                                                     <  6:331255/149‑1 (MQ=255)
                               cccATCAAGCATAATCGAAGGTTCAATATCGCCCCTTTTTGATCGCCAGCGATTCGTCACCGTGCAGACGGTTGCCGTCACTCACTAAATTATGGGGGACAGTGAACAACAGGTTGGATCACTTGCAAGAACCCGATTATAACACTAAg                                                                                                                     >  1:166946/1‑149 (MQ=255)
                                ccATCAAGCATAATCGAAGGTTCAATATCGCCCCTTTTTGATCGCCAGCGATTCGTCACCGTGCAGACGGTTGCCGTCACTCACTAAATTATGGGGGACAGTGAACAACAGGTTGGCTCACTGGCAAGAACCCGAt                                                                                                                                 >  6:250322/1‑136 (MQ=255)
                                ccATCAAGCATAATCGAAGGTTCAATATCGCCCCTTTTTGATCGCCAGCGATTCGTCACCGTGCAGACGGTTGCCGTCACTCACTAAATTATGGGGGACAGTGAACAACAGGTTGGCTCACTGGCAAGAACCCGAt                                                                                                                                 <  5:250322/136‑1 (MQ=255)
                                ccATCAAGCATAATCGAAGGTTCAATATCGCCCCTTTTTGATCGCCAGCGATTCGTCACCGTGCAGACGGTTGCCGTCACTCACTAAATTATGGGGGACAGTGAACAACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGc                                                                                                                    >  1:209599/1‑149 (MQ=255)
                                ccATCAAGCATAATCGAAGGTTCAATATCGCCCCTTTTTGATCGCCAGCGATTCGTCACCGTGCAGACGGTTGCCGTCACTCACTAAATTATGGGGGACAGTGAACAACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGc                                                                                                                    >  5:374871/1‑149 (MQ=255)
                                  aTCAAGCATAATCGAAGGTTCAATATCGCCCCTTTTTGATCGCCAGCGATTCGTCACCGTGCAGACGGTTGCCGTCACTCACTAAATTATGGGGGACAGTGAACAACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTg                                                                                                                  <  7:324968/149‑1 (MQ=255)
                                  aTCAAGCATAATCGAAGGTTCAATATCGCCCCTTTTTGATCGCCAGCGATTCGTCACCGTGCAGACGGTTGCCGTCACTCACTAAATTATGGGGGACAGTGAACAACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTg                                                                                                                  >  7:17047/1‑149 (MQ=255)
                                      aGCATAATCGAAGGTTCAATATCGCCCCTTTTTGATCGCCAGCGATTCGTCACCGTGCAGACGGTTGCCGTCACTCACTAAATTATGGGGGACAGTGAACAACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGc                                                                                                                >  1:307037/1‑147 (MQ=255)
                                        cATAATCGAAGGTTCAATATCGCCCCTTTTTGATCGCCAGCGATTCGTCACCGTGCAGACGGTTGCCGTCACTCACTAAATTATGGGGGACAGTGAACAACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAg                                                                                                             >  1:222520/1‑148 (MQ=255)
                                         aTAATCGAAGGTTCAATATCGCCCCTTTTTGATCGCCAGCGATTCGTCACCGTGCAGACGGTTGCCGTCACTCACTAAATTATGGGGGACAGTGAACAACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCa                                                                                                           <  7:105601/149‑1 (MQ=255)
                                               gAAGGTTCAATATCGCCCCTTTTTGATCGCCAGCGATTCGTCACCGTGCAGACGGTTGCCGTCACTCACTAAATTATGGGGGACAGTGAACAACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATa                                                                                                      >  7:351050/1‑148 (MQ=255)
                                                 aGGTTCAATATCGCCCCTTTTTGATGGCCATCGATTCGTCACCGTGCAGACGGTTGCCGTCACTCACTAAATTATGTGGGACAGTTAACAACAGTTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATaaaa                                                                                                   <  3:224097/149‑1 (MQ=255)
                                                  ggTTCAATATCGCCCCTTTTTGATCGCCAGCGATTCGTCACCGTGCAGACGGTTGCCGTCACTCACTAAATTATGGGGGACAGTGAACAACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATaaaaa                                                                                                  <  6:327212/149‑1 (MQ=255)
                                                   gTTCAATATCGCCCCTTTTTGATCGCCAGCGATTCGTCACCGTGCAGACGGTTGCCGTCACTCACTAAATTATGGGGGACAGTGAACAACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTTAGCTGGCGAGCAGAATAAAAAt                                                                                                 <  8:351992/149‑1 (MQ=255)
                                                    ttCAATATCGCCCCTTTTTGATCGCCAGCGATTCGTCACCGTGCAGACGGTTGCCGTCACTCACTAAATTATGGGGGACAGTGAACAACAGGTTGGCTCACTGGCAAGAACCCGATtata                                                                                                                             >  3:295099/1‑120 (MQ=255)
                                                    ttCAATATCGCCCCTTTTTGATCGCCAGCGATTCGTCACCGTGCAGACGGTTGCCGTCACTCACTAAATTATGGGGGACAGTGAACAACAGGTTGGCTCACTGGCAAGAACCCGATtata                                                                                                                             <  4:295099/120‑1 (MQ=255)
                                                    ttCAATATCGCCCCTTTTTGATCGCCAGCGATTCGTCACCGTGCAGACGGTTGCCGTCACTCACTAAATTATGGGGGACAGTGAACAACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATc                                                                                                <  7:219519/149‑1 (MQ=255)
                                                      cAATATCGCCCCTTTTTGATCGCCAGCGATTCGTCACCGTGCAGACGGTTGCCGTCACTCACTAAATTATGGGGGACAGTGAACAACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCa                                                                                               <  1:231914/148‑1 (MQ=255)
                                                      cAATATCGCCCCTTTTTGATCGCCAGCGATTCGTCACCGTGCAGACGGTTGCCGTCACTCACTAAATTATGGGGGACAGTGAACAACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCa                                                                                               <  2:307037/148‑1 (MQ=255)
                                                        atatCGCCCCTTTTTGATCGCCAGCGATTCGTCACCGTGCAGACGGTTGCCGTCACTCACTAAATTATGGGGGACAGTGAACAACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGcc                                                                                            >  6:262273/1‑149 (MQ=255)
                                                         tatCGCCCCTTTTTGATCGCCAGCGATTCGTCACCGTGCAGACGGTTGCCGTCACTCACTAAATTATGGGGGACAGTGAACAACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGcc                                                                                            >  7:233720/1‑148 (MQ=255)
                                                              ccccTTTTTTATCGCCAGCGATTCGTCACCGTGCAGACGGTTGCCGTCACTCACTAAATTATGGGGGACAGTGAACAACAGGTTTGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACTGa                                                                                      <  3:331352/149‑1 (MQ=255)
                                                              ccccTTTTTGATCGCCAGCGATTCGTCACCGTGCAGACGGTTGCCGTCACTCACTAAATTATGGGGGACAGTGAACAACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACTGa                                                                                      >  6:346778/1‑149 (MQ=255)
                                                              ccccTTTTTGATCGCCAGCGATTCGTCACCGTGCAGACGGTTGCCGTCACTCACTAAATTATGGGGGACAGTGAACAACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACTGa                                                                                      <  5:14312/149‑1 (MQ=255)
                                                               cccTTTTTGATCGCCAGCGATTCGTCACCGTGCAGACGGTTGCCGTCACTCACTAAATTATGGGGGACAGTGAACAACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACTGAt                                                                                     >  2:327384/1‑149 (MQ=255)
                                                                ccTTTTTGATCGCCAGCGATTCGTCACCGTGCAGACGGTTGCCGTCACTCACTAAATTATGGGGGACAGTGAACAACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACTGATg                                                                                    <  8:384179/149‑1 (MQ=255)
                                                                 cTTTTTGATCGCCAGCGATTCGTCACCGTGCAGACGGTTGCCGTCACTCACTAAATTATGGGGGACAGTGAACAACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAg                                                                                              <  8:192009/138‑1 (MQ=255)
                                                                   ttttGATCGCCAGCGATTCGTCACCGTGCAGACGGTTGCCGTCACTCACTAAATTATGGGGGACAGTGAACAACAGGTTGGCTCACTGGCAAGAACCCGATTATAAATCTAAGCTGGCGAGCAGAATAAAAATCAGCCCACTGATGGa                                                                                  >  8:375826/1‑148 (MQ=255)
                                                                    tttGATCGCCAGCGATTCGTCACCGTGCAAACGGTTGCCGTCACTCACTAAATTATGGGGGACAGTGAACAACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACTGATGGAt                                                                                 <  6:265033/148‑1 (MQ=255)
                                                                       gATCGCCAGCGATTCGTCACCGTGCAGACGGTTGCCGTCACTCACTAAATTATGGGGGACAGTGAACAACAGGTTGGCTCACTGGCAAGACCCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACTGATGGATaa                                                                               >  8:121707/1‑147 (MQ=255)
                                                                       gATCGCCAGCGATTCGTCACCGTGCAGACGGTTGCCGTCACTCACTAAATTATGGGGGACAGTGAACAACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACTGATGGATaa                                                                               >  8:115907/1‑147 (MQ=255)
                                                                        aTCGCCAGCGATTCGTCACCGTGCAGACGGTTGCCGTCACTCACTAAATTATGGGGGACAGTGAACAACATGTAGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACTGATGGATAagag                                                                            >  3:193848/1‑149 (MQ=255)
                                                                        aTCGCCAGCGATTCGTCACCGTGCAGACGGTTGCCGTCACTCACTAAATTATGGGGGACAGTGAACAACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACTGATGGATAaga                                                                             <  4:149471/148‑1 (MQ=255)
                                                                        aTCGCCAGCGATTCGTCACCGTGCAGACGGTTGCCGTCACTCACTAAATTATGGGGGACAGTGAACAACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACTGATGGATAaga                                                                             <  8:351050/148‑1 (MQ=255)
                                                                         tCGCCAGCGATTCGTCACCGTGCAGACGGTTGCCGTCACTCACTAAATTATGGGGGACAGTGAACAACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACTGATGGATAAGAgt                                                                           >  1:68910/1‑149 (MQ=255)
                                                                           gCCAGCGATTCGTCACCGTGCAGACGGTTGCCGTCACTCACTAAATTATGGGGGACAGTGAACAACAGGTTGGCTCCCTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACTGATGGATAAGAgtgt                                                                         >  5:344122/1‑149 (MQ=255)
                                                                           gCCAGCGATTCGTCACCGTGCAGACGGTTGCCGTCACTCACTAAATTATGGGGGACAGTGAACAACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACTGATGGATAAGAgtgt                                                                         >  1:186572/1‑149 (MQ=255)
                                                                            ccAGCGATTCGTCACCGTGCAGACGGTTGCCGTCACTCACTAAATTATGGGGGACAGTGAACAACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACTGATGGATAAGAGtgtg                                                                        <  2:382776/149‑1 (MQ=255)
                                                                              aGCGATTCGTCACCGTGCAGACGGTTGCCGTCACTCACTAAATTATGGGGGACAGTGAACAACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACTGATGGATAAGAGTGTGGa                                                                      >  7:350901/1‑149 (MQ=255)
                                                                                 gATTCGTCACCGTGCAGACGGTTGCCGTCACTCACTAAATTATGGGGGACAGTGAACAACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACTGATGGATAAGAGTGTGGACAt                                                                   >  5:113354/1‑149 (MQ=255)
                                                                                         aCCGTGCAGACGGTTGCCGTCACTCACTAAATTATGGGGGACAGTGAACAACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTACGCGGGCGAGCAGAATAAAACTCAGCCCACTGATGGATAAGAGTGGGGACATCAGCGTcc                                                           <  8:111120/149‑1 (MQ=255)
                                                                                          ccGGGCAGACGGTTGCCGTCACTCACTAAATTATGGGGGACAGTGAACAACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACTGATGGATAAGAGTGTGGACATCAGCGTCCa                                                          <  8:42239/149‑1 (MQ=255)
                                                                                               cAGACGGTTGCCGTCACTCACTAAATTATGGGGGACAGTGAACAACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACTGATGGATAAGAGTGTGGACATCAGCGTCCAGGAt                                                      <  1:327384/148‑1 (MQ=255)
                                                                                               cAGACGGTTGCCGTCACTCACTAAATTATGGGGGACAGTGAACAACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACTGATGGATAAGAGTGTGGACATCAGCGTCCAGGAt                                                      <  2:222520/148‑1 (MQ=255)
                                                                                                aGACGGTTGCCGTCACTCACTAAATTATGGGGGACAGTGAACAACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACTGATGGATAAGAGTGTGGACATCAGCGTCCAGGATaa                                                    >  7:150453/1‑149 (MQ=255)
                                                                                                  aCGGTTGCCGTCACTCACTAAATTATGGGGGACAGTGAACAACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACTGATGGATAAGAGTGTGGACATCAGCGTCCAGGATaa                                                    >  6:207983/1‑147 (MQ=255)
                                                                                                  aCGGTTGCCGTCACTCACTAAATTATGGGGGACAGTGAACAACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACTGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACa                                                  <  1:137156/149‑1 (MQ=255)
                                                                                                  aCGGTTGCCGTCACTCACTAAATTATGGGGGACAGTGAACAACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACTGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACa                                                  <  5:346778/149‑1 (MQ=255)
                                                                                                   cGGTTGCCGTCACTCACTAAATTATGGGGGACAGTGAACAACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACTGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAg                                                 <  8:201569/149‑1 (MQ=255)
                                                                                                      ttGCCGTCACTCACTAAATTATGGGGGACAGTGAACAACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACTGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGt                                              >  2:109060/1‑149 (MQ=255)
                                                                                                             cactcactAAATTATGGGGGACAGTGAACAACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACTGATGGATAAGCGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCttag                                       >  2:111282/1‑147 (MQ=255)
                                                                                                              actcactAAATTTTGGGGGACAGTGAACAACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCTCTGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTtg                                       <  2:209599/148‑1 (MQ=255)
                                                                                                              actcactAAATTATGGGGGACAGTGAACAACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACTGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTtgg                                      >  2:157094/1‑149 (MQ=255)
                                                                                                               ctcactAAATTATGGGGGACAGTGAACAACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACTGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTtggt                                     <  7:147540/149‑1 (MQ=255)
                                                                                                                  actAAATTATGGGGGACAGTGAACAACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACTGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTtggtggg                                  <  5:262273/149‑2 (MQ=255)
                                                                                                                  actAAATTATGGGGGACAGTGAACAACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACTGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTggtggt                                  >  5:74444/1‑149 (MQ=255)
                                                                                                                  actAAATTATGGGGGACAGTGAACAACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACTGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTggtggt                                  >  1:249389/1‑149 (MQ=255)
                                                                                                                   ctAAATTATGGGGGACAGTGAACAACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACTGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTggtggt                                  >  5:12665/1‑148 (MQ=255)
                                                                                                                           tGGGGGACAGTGAACAACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACTGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGCCaa                          >  4:109625/1‑148 (MQ=255)
                                                                                                                              gggACAGTGAACAACAGGTTGGCTCACTGGCAAGAACCCGATTATTAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACTGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGCCaaca                        >  4:144392/1‑145 (MQ=255)
                                                                                                                              gggACAGTGAACAACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACTGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGCCaaaaaa                      <  2:373247/149‑1 (MQ=255)
                                                                                                                              gggACAGTGAACAACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACTGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGCCaaaaaa                      <  6:74444/149‑1 (MQ=255)
                                                                                                                               tctcAGTGAACAACAGGTTTGCTCACTGGCAATAACCCGATTATAAAACTAACCTGGCGAGCAGATTAAAAATCAGCCCACTGATGGATAAGAGTGAGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGTCCaaaaaa                      <  1:20506/145‑1 (MQ=255)
                                                                                                                                 aCAGTGAACAACAGGTTGGCtcactgtcccccataatttagtgagtgacggcaaccgtctgcacggtgacgaatcgctggcgatcaaaaagggg                                                                          <  1:263787‑M2/94‑75 (MQ=255)
                                                                                                                                 aCAGTGAACAACAGGTTGGCtcactgtcccccataatttagtgagtgacggcaaccgtctgcacggtgacgaatcgctggcgatcaaaaagggg                                                                          >  2:263787‑M2/1‑20 (MQ=255)
                                                                                                                                 aCAGTGAACAACAGGTTGGCTCACTGGCAAGAACCAGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACTGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGCCAAAAAAggc                   <  8:350901/149‑3 (MQ=255)
                                                                                                                                   aGTGAAGAACAGGTTGGCTCACTGGCAAGAAACCGATTATAAAACTAAGCTGGCGCGCAGATTAAAAATCAGCCAACTGATGGATAAGAGTGTGGAGATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCATGCGAAAAAAgatat                 >  2:20506/1‑145 (MQ=255)
                                                                                                                                   aGTGAACAACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACTGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGCCAAAAAAGTCtt                 <  3:355367/149‑1 (MQ=255)
                                                                                                                                   aGTGAACAACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACTGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGCCAAAAAAGTCtt                 <  1:157094/149‑1 (MQ=255)
                                                                                                                                   aGTGAACAACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACTGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGCCAAAAAAGTCtt                 <  1:109060/149‑1 (MQ=255)
                                                                                                                                    gttaacaacAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACTTATGGATAAGAGTGTGGTCATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGCCAAAAAAGTCttt                <  1:56544/146‑1 (MQ=255)
                                                                                                                                    gTGAACAACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACTGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGCCaaaaaa                      >  1:311741/1‑143 (MQ=255)
                                                                                                                                    gTGAACAACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACTGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGCCaaaaaa                      <  2:311741/143‑1 (MQ=255)
                                                                                                                                     tGAACAACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACTGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGCCAAAAAAGTCttt                >  6:278977/1‑148 (MQ=255)
                                                                                                                                         caacaGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACTGATGGATAAGAGTGTGGACCTCAGCGTCCAGGCTAACAGCGTTTCTTTGGTGGTCAGGCCAAAAACGTCTTTAatca           >  2:161230/1‑149 (MQ=255)
                                                                                                                                          aacaGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACTGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGCCAAAAAAGTCTTTAatcat          >  2:363986/1‑149 (MQ=255)
                                                                                                                                             aGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACTGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGCCAAAAAAGTCTTTAATCATCCa       <  8:150453/149‑1 (MQ=255)
                                                                                                                                               gTTGGCtcactgtcccccataatttagtgagtgacggcaaccgtctgcacggtgacgaatcgctggcgatcaaaaaggggcgatattgaaccttcgat                                                        >  8:113278‑M2/1‑6 (MQ=255)
                                                                                                                                               gTTGGCtcactgtcccccataatttagtgagtgacggcaaccgtctgcacggtgacgaatcgctggcgatcaaaaaggggcgatattgaaccttcgat                                                        <  7:113278‑M2/98‑93 (MQ=255)
                                                                                                                                                  ggCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACTGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGCCAAAAAAGTCTTTAATCATCCAGAAAc  >  1:234224/1‑149 (MQ=255)
                                                                                                                                                    |                                                                                                                                                  
GCTCCGGCTTTACAGTATTACTGAGAATACACCCATCAAGCATAATCGAAGGTTCAATATCGCCCCTTTTTGATCGCCAGCGATTCGTCACCGTGCAGACGGTTGCCGTCACTCACTAAATTATGGGGGACAGTGAACAACAGGTTGGCTCACTGGCAAGAACCCGATTATAAAACTAAGCTGGCGAGCAGAATAAAAATCAGCCCACTGATGGATAAGAGTGTGGACATCAGCGTCCAGGATAACAGCGTTTCTTTGGTGGTCAGGCCAAAAAAGTCTTTAATCATCCAGAAAC  >  NC_000913/4520504‑4520798

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.