| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 167,842:1 | +T | 71.1% | coding (359/2244 nt) | fhuA → | ferrichrome outer membrane transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 167,842 | 1 | . | T | 71.1% | 238.8 / 100.1 | 97 | coding (359/2244 nt) | fhuA | ferrichrome outer membrane transporter |
| Reads supporting (aligned to +/- strand): ref base . (17/11); new base T (39/30); total (56/41) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.22e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.70e-01 | |||||||||||
Only 100 of 101 total aligned reads displayed.
ACCGATACGCCGATTCAAAAAGTGCCACAGTCTATTTCTGTTGTGACCGCCGAAGAGATGGCGCTGCATCAGCCGAAGTCGGTAAAAGAAGCGCTTAGCTACACGCCGGGTGTCTCTGTTGGTACGCGTGGCGCATCCAACACCTA‑TGACCACCTGATCATTCGCGGCTTTGCGGCAGAAGGCCAAAGCCAGAATAACTATCTGAATGGCCTGAAGTTGCAGGGCAACTTCTATAACGATGCGGTCATTGACCCGTATATGCTGGAACGCGCTGAAATTATGCGTGGCCCGG > NC_000913/167697‑167988 | aCCGATACGCCGATTCAAAAAGTGCCACCGTCTATTTCTGTTGTGACCGCCGAAGAGATGGCGCTGCATCAGCCGAAGTCGGTAAAAGAAGCGCTTAGCTACACGCCGGGTGTCTCTGTTGGTACGCGTGGCGCATCCAACACCTA‑tt > 5:154526/1‑147 (MQ=255) gATACGCCTTTTCAAAAAGTGCCACAGTCTATTTCTGTTGTGACCGCCGACGAGATGGCGCTGCATCAGCCGAAGTCGGTAAAATAAGCGCTTAGCTACACGCCGGGTGTCTCTGTTGGTACGCGTGGCGCATCCAACACCTA‑ttgacc < 2:136353/149‑6 (MQ=255) gCCGATTCAAAAAGTGCCACAGTCTATTTCTGTTGTGACCGCCGAAGAGATGGCGCTGCATCAGCCGAAGTCGGTAAAAGAAGCGCTTAGCTACACGCCGGGTGTCTCTGTTGGTACGCGTGGCGCATCCAACACCTATTGACCACCt > 4:154575/1‑148 (MQ=255) ttCAAAAAGTGCCACAGTCTATTTCTGTTGTGACCGCCGAAGAGATGGCGCTGCATCAGCCGAAGTCGGTAAAAGAAGCGCTTAGCTACACGCCGGGTGTCTCTGTTGGTACGCGTGGCGCATCCAACACCTATTGACCACCTGATCa > 2:372429/1‑148 (MQ=255) ttCAAAAAGTGCCACAGTCTATTTCTGTTGTGACCGCCGAAGAGATGGCGCTGCATCAGCCGAAGTCGGTAAAAGAAGCGCTTAGCTACACGCCGGGTGTCTCTGTTGGTACGCGTGGCGCATCCAACACCTATTGACCACCTGATCa < 1:372429/148‑1 (MQ=255) aaaaaGTGCCACAGTCTATTTCTGTTGTGACCGCCGAAGAGATGGCGCTGCATCAGCCGAAGTCGGTAAAAGAAGCGCTTAGCTACACGCCGGGTGTCTCTGTTGGTACGCGTGGCGCATCCAACACCTATTGACCACCTGATCATTcg > 8:398209/1‑149 (MQ=255) aaaaaGTGCCACAGTCTATTTCTGTTGTGACCGCCGAAGAGATGGCGCTGCATCAGCCGAAGTCGGTAAAAGAAGCGCTTAGCTACACGCCGGGTGTCTCTGTTGGTACGCGTGGCGCATCCAACACCTA‑t < 8:178711/131‑1 (MQ=255) aaaaaGTGCCACAGTCTATTTCTGTTGTGACCGCCGAAGAGATGGCGCTGCATCAGCCGAAGTCGGTAAAAGAAGCGCTTAGCTACACGCCGGGTGTCTCTGTTGGTACGCGTGGCGCATCCAACACCTA‑t > 7:178711/1‑131 (MQ=255) aaaaaGTGCCACAGTCTATTTCTGTTGTGACCGCCGAAGAGATGGCGCTGCATCAGCCGAAGTCGGTAAAAGAAGCGCTTAGCTACACGCCGGGTGTCTCTGTTGGTACGCGTGGCGCATCCAACACCTA‑TGACCACCTGATCATTcgc < 7:62416/149‑1 (MQ=255) aaaaGTGCCACAGTCTATTTCTGTTGTGACCGCCGAAGAGATGGCGCTGCATCAGCCGAAGTCGGTAAAAGAAGCGCTTAGCTACACGCCGGGTGTCTCTGTTGGTACGCGTGGCGCATCCAACACCTA‑TGACCACCTGATCATTcgcg > 6:70563/1‑149 (MQ=255) ccACAGTCTATTTCTGTTGTGACCGCCGAAGAGATGGCGCTGCATCAGCCGAAGTCGGTAAAAGAAGCGCTTAGCTACACGCCGGGTGTCTCTGTTGGTACGCGTGGCGCATCCAACACCTATTGACCACCTGATCATTcgc > 1:24892/1‑142 (MQ=255) ccACAGTCTATTTCTGTTGTGACCGCCGAAGAGATGGCGCTGCATCAGCCGAAGTCGGTAAAAGAAGCGCTTAGCTACACGCCGGGTGTCTCTGTTGGTACGCGTGGCGCATCCAACACCTATTGACCACCTGATCATTcgc < 2:24892/142‑1 (MQ=255) ccACAGTCTATTTCTGTTGTGACCGCCGAAGAGATGGCGCTGCATCAGCCGAAGTCGGTAAAAGAAGCGCTTAGCTACACGCCGGGTGTCTCTGTTGGTACGCGTGGCGCATCCAACACCTATTGACCACCTGATCATTCGCGGCTTTg > 1:144327/1‑149 (MQ=255) ccACAGTCTATTTCTGTTGTGACCGCCGAAGAGATGGCGCTGCATCAGCCGAAGTCGGTAAAAGAAGCGCTTAGCTACACGCCGGGTGTCTCTGTTGGTACGCGTGGCGCATCCAACACCTATTGACCACCTGATCATTCGCGGCTTTg > 7:332749/1‑149 (MQ=255) cacaGTCTATTTCTTTTGTGACCGCCGAAGAGATGGCGCTGCATCAGCAGAAGTCGGTAAAAGAAGCGCTTAGCTACACGCCGTGTGTCTCTGTTGGTACGCGTGTCTCATCCAACACCTATTGACCACCTGATCATTCTCGGCTTTGc < 1:238499/149‑1 (MQ=255) cacaGTCTATTTCTGTTGTGACCGCCGAAGAGATGGCGCTGCATCAGCCGAAGTCGGTAAAAGAAGCGCTTAGCTACACGCCGGGTGTCTCTGTTGGTACGCGTGGCGCATCCAACACCTATTGACCACCTGATCATTCGCGGCTTTGc > 6:154218/1‑149 (MQ=255) cacaGTCTATTTCTGTTGTGACCGCCGAAGAGATGGCGCTGCATCAGCCGAAGTCGGTAAAAGAAGCGCTTAGCTACACGCCGGGTGTCTCTGTTGGTACGCGTGGCGCATCCAACACCTATTGACCACCTGATCATTCGCGGCTTTGc > 2:275123/1‑149 (MQ=255) cacaGTCTATTTCTGTTGTGACCGCCGAAGAGATGGCGCTGCATCAGCCGAAGTCGGTAAAAGAAGCGCTTAGCTACACGCCGGGTGTCTCTGTTGGTACGCGTGGCGCATCCAACACCTATTGACCACCTGATCATTCGCGGCTTTGc > 5:119107/1‑149 (MQ=255) cacaGTCTATTTCTGTTGTGACCGCCGAAGAGATGGCGCTGCATCAGCCGAAGTCGGTAAAAGAAGCGCTTAGCTACACGCCGGGTGTCTCTGTTGGTACGCGTGGCGCATCCAACACCTA‑TGACCACCTGATCATTCGCGGCTTTGCg > 5:449686/1‑149 (MQ=255) acaGTCTATTTCTGTTGTGACCGCCGAAGAGATGGCGCTGCATCAGCCGAAGTCGGTAAAAGAAGCGCTTAGCTACACGCCGGGTGTCTCTGTTGGTACGCGTGGCGCATCCAACACCTATTGACCACCTGAt > 5:205494/1‑133 (MQ=255) acaGTCTATTTCTGTTGTGACCGCCGAAGAGATGGCGCTGCATCAGCCGAAGTCGGTAAAAGAAGCGCTTAGCTACACGCCGGGTGTCTCTGTTGGTACGCGTGGCGCATCCAACACCTATTGACCACCTGATCATTCGCGGCTTTGCg > 8:278988/1‑149 (MQ=255) acaGTCTATTTCTGTTGTGACCGCCGAAGAGATGGCGCTGCATCAGCCGAAGTCGGTAAAAGAAGCGCTTAGCTACACGCCGGGTGTCTCTCTTGGTACGCGGGGAGCATCCAACACCTATTGACCACCTGATCATTCGCGGCTTTGCg > 7:456087/1‑149 (MQ=255) acaGTCTATTTCTGTTGTGACCGCCGAAGAGATGGCGCGGCATCAGCCGAAGTCGGTAAAAGAAGCGCTTAGCTACACGCCGGGTGTCTCTGTTGGTACGCGTGGCGCATCCAACACCTATTGACCACCTGAt < 6:205494/133‑1 (MQ=255) caGTCTATTTCTGTTGTGACCGCCGAAGAGATGGCGCTGCATCAGCCGAAGTCGGTAAAAGAAGCGCTTAGCTACACGCCGGGTGTCTCTGTTGGTACGCGTGGCGCATCCAACACCTATTGACCACCTGATCATTCGCGGCTTTGCgg < 3:154575/149‑1 (MQ=255) gTCTATTTCTGTTGTGACCGCCGAAGAGATGGCGCTGCATCAGCCGAAGTCGGTAAAAGAAGCGCTTAGCTACACGCCGGGTGTCTCTGTTGGTACGCGTGGCGCATCCAACACCTA‑TGACCACCTGATCATTCGCGGCTTTGCgg > 7:223867/1‑146 (MQ=255) tCTATTTCTGTTGTGACCGCCGAAGAGATGGCGCTGCATCAGCCGAAGTCGGTAAAAGAAGCGCTTAGCTACACGCCGGGTGTCTCTGTTGGTACGCGTGGCGCATCCAACACCTATTGACCACCTGAt < 6:199330/129‑1 (MQ=255) tCTATTTCTGTTGTGACCGCCGAAGAGATGGCGCTGCATCAGCCGAAGTCGGTAAAAGAAGCGCTTAGCTACACGCCGGGTGTCTCTGTTGGTACGCGTGGCGCATCCAACACCTATTGACCACCTGAt > 5:199330/1‑129 (MQ=255) cTATTTCTGTTGTGACCGCCGAAGAGATGGCGCTGCATCAGCCGAAGTCGGTATAAGAAGCGCTTAGCTACACGCCGGGTGTCTCTGTTGGTAGGCGTGGCGCATCCAACACCTA‑TGACCACCTGATCATTCGCGGCTTTTCGGAAg > 4:28874/1‑147 (MQ=255) tATTTCTGTTGTGACCGCCGAAGAGATGGCGCTGCATCAGCCGAAGTCGGTAAAAGAAGCGCTTAGCTACACGCCGGGTGTCTCTGTTGGTACGCGTGGCGCATCCAACACCTA‑TGACCACCTGATCATTCGCGGCTTTGCGGCAGAAg > 5:152901/1‑149 (MQ=255) tttCTGTTGTGACCGCCGAAGAGATGGCGCTGCATCAGCCGAAGTCGGTAAAAGAAGCGCTTAGCTACACGCCGGGTGTCTCTGTTGGTACGCGTGGCGCATCCAACACCTA‑TGACCACCTGATCATTCCCGGCTTTGCGGCAGaa < 6:449686/146‑1 (MQ=255) cTGTTGTGACTGCCGAAGAGATGGCGCTGCATCAGCCGAAGTCGGTAAAAGAAGCGCTTAGCTACACGCCGGGTGTCTCTGTTGGTACGCGTGGCGCATCCAACACCTATTGACCACCTGATCATTCGCGGCTTTGCgg < 2:25600/139‑1 (MQ=255) cTGTTGTGACTGCCGAAGAGATGGCGCTGCATCAGCCGAAGTCGGTAAAAGAAGCGCTTAGCTACACGCCGGGTGTCTCTGTTGGTACGCGTGGCGCATCCAACACCTATTGACCACCTGATCATTCGCGGCTTTGCgg > 1:25600/1‑139 (MQ=255) cTGTTGTGACCGCCGAAGAGATGGCGCTGCATCAGCCGAAGTCGGTAAAAGAAGCGCTTAGCTACACGCCGGGTGTCTCTGTTGGTACGCGTGGCGCATCCAACACCTA‑TGACCACCTGATCATTCGCGGCTTTGCGGCAGAAGGCCa > 4:144975/1‑148 (MQ=255) ttgtGACCGCCGAAGAGATGGCGCTGCATCAGCCGAAGTCGGTAAAAGAAGCGCTTAGCTACACGCCGGGTGTCTCTGTTGGTACGCGTGGCGCATCCAACACCTATTGACCACCTGATCATTCGCGGCTTTGCGGCAGAAGGCCaaa < 3:264796/148‑1 (MQ=255) ttgtGACCGCCGAAGAGATGGCGCTGCATCAGCCGAAGTCGGTAAAAGAAGCGCTTAGCTACACGCCGGGTGTCTCTGTTGGTACGCGTGGCGCATCCAACACCTATTGACCACCTGATCATTCGCGGCTTTGCGGCAGAAGGCCa > 4:264796/1‑146 (MQ=255) ttgtGACCGCCGAAGAGATGGCGCTGCATCAGCCGAAGTCGGTAAAAGAAGCGCTTAGCTACACGCCGGGTGTCTCTGTTGGTACGCGTGGCGCATCCAACACCTATTGACCACCTGATCATTCGCGGCTTTGCGGCAGAAGGCCAAAg < 5:154218/149‑1 (MQ=255) ttgtGACCGCCGAAGAGATGGCGCTGCATCAGCCGAAGTCGGTAAAAGAAGCGCTTAGCTACACGCCGGGTGTCTCTGTTGGTACGCGTGGCGCATCCAACACCTA‑TGACCACCTGATCATTCGCGGCTTTGCGGCAGAAGGCCAAAGc > 3:191729/1‑149 (MQ=255) tgACCGCCGAAGAGATGGCGCTGCATCAGCCGAAGTCGGTAAAAGAAGCGCTTAGCTACACGCCGGGTGTCTCTGTTGGTACGCGTGGCGCATCCAACACCTATTGACCACCTGATCATTCGCGGCTTTGCGGCAGAAGGCCAAAGCCa < 6:154526/149‑1 (MQ=255) gACCGCCGAAGAGATGGCGCTGCATCAGCCGAAGTCGGTAAAAGAAGCGCTTAGCTACACGCCGGGTGTCTCTGTTGGTACGCGTGGCGCATCCAACACCTATTGACCACCTGATc < 5:69622/116‑1 (MQ=255) gACCGCCGAAGAGATGGCGCTGCATCAGCCGAAGTCGGTAAAAGAAGCGCTTAGCTACACGCCGGGTGTCTCTGTTGGTACGCGTGGCGCATCCAACACCTATTGACCACCTGATc > 6:69622/1‑116 (MQ=255) cgccgAAGAGATGGCGCTGCATCAGCCGAAGTCGGTAAAAGAAGCGCTTAGCTACACGCCGGGTGTCTCTGTTGGTACGCGTGGCGCATCCAACACCTATTGACCACCTGATCATTCGCGGCttt > 6:69016/1‑125 (MQ=255) cgccgAAGAGATGGCGCTGCATCAGCCGAAGTCGGTAAAAGAAGCGCTTAGCTACACGCCGGGTGTCTCTGTTGGTACGCGTGGCGCATCCAACACCTATTGACCACCTGATCATTCGCGGCttt < 5:69016/125‑1 (MQ=255) ccgAAGAGATGGCGCTGCATCAGCCGAAGTCGGTAAAAGAAGCGCTTAGCTACACGCCGGGTGTCTCTGTTGGTACGCGTGGCGCATCCAACACCTATTGACCACCTGATCATTCGCGGCTTTGCGGCAGAAGGCCAAAGCCAGAATaa < 6:119107/149‑1 (MQ=255) gAAGAGATGGCGCTGCATCAGCCGAAGTCGGTAAAAGAAGCGCTTAGCTACACGCCGGGTGTCTCTGTTGGTACGCGTGGCGCATCCAACACCTA‑TGACCACCTGATCATTCGCGGCTTTGCGGCAGAAGGCCAAAGCCAGAATAACt > 4:393247/1‑148 (MQ=255) agagATGGCGCTGCATCAGCCGAAGTCGGTAAAAGAAGCGCTTAGCTACACGCCGGGTGTCTCTGTTGGTACGCGTGGCGCATCCAACACCTATTGACCACCTGATCATTCGCGGCTTTGCGGCAGAAGGCCAAAGCCAGAATAACTAt < 2:34878/149‑1 (MQ=255) agagATGGCGCTGCATCAGCCGAAGTCGGTAAAAGAAGCGCTTAGCTACACGCCGGGTGTCTCTGTTGGTACGCGTGGCGCATCCAACACCTA‑TGACCACCTGATCATTCGCGGCTTTGCGGCAGAAGGCCAAAGCCAGAATAACTATc < 4:191729/149‑1 (MQ=255) gagaTGGCGCTGCATCAGCCGAAGTCGGTAAAAGAAGCGCTTAGCTACACGCCGGGTGTCTCTGTTGGTACGCGTGGCGCATCCAACACCTATTGACCACCTGATCATTCGCGGCTTTGCGGCAGAAGGCCAAAGCCAGAATAACTATc < 2:144327/149‑1 (MQ=255) gagaTGGCGCTGCATCAGCCGAAGTCGGTAAAAGAAGCGCTTAGCTACACGCCGGGTGTCTCTGTTGGTACGCGTGGCGCATCCAACACCTATTGACCACCTGATCATTCGCGGCTTTGCGGCAGAAGGCCAAAGCCAGAATAACTATc < 8:332749/149‑1 (MQ=255) aTGGCGCTGCATCAGCCGAAGTCGGTAAAAGAAGCGCTTAGCTACACGCCGGGTGTCTCTGTTGGTACGCGTGGCGCATCCAACACCTATTGACCACCTGATCATTCGCGGCTTTGCGGCAGAAGGCCAAAGCCAGAATAACTATCTg > 1:405052/1‑148 (MQ=255) tGGCGCTGCAGCAGCCGAAGTCGGTAAAAGAAGCGCTTAGCTACACGCCGGGTGTCTCTGTTGGTACGCGTGGCGCATCCAACACCTATTGACCACCTGATCATTCGCGGCTTTGCGGCAGAAGGCCAAAGCCAGAATAACTATCTGaa < 1:275123/149‑1 (MQ=255) ggCGCTGCATCAGCCGAAGTCGGTAAAAGAAGCGCTTAGCTACACGCCGGGTGTCTCTGTTGGTACGCGTGGCGCATCCAACACCTA‑TGACCACCTGATCATTCGCGGCTTTGCGGCAGAAGGCCAAAGCCAGAATAACTATCTGCATg > 2:194431/1‑149 (MQ=255) ggCGCTGCATCAGCCGAAGTCGGTAAAAGAAGCGCTTAGCTAAACGCCGGGTGTCTCTGTTGGTACGCGTGGCGCATCCAACACCTATTGACCACCTGATCATTCGCGGCTTTGCGGCAGAAGGCCAAAGCCAGAATAACTATCTGAAt > 5:154783/1‑149 (MQ=255) cgcTGCATCAGCCGAAGTCGGTAAAAGAAGCGCTTAGCTACACGCCGGGTGTCTCTGTTGGTACGCGTGGCGCATCCAACACCTA‑TGACCACCTGATCATTCGCGGCTTTGCGGCAGAAGGCCAAAGCCAGAATAACTATCTGAATGGc < 5:70563/149‑1 (MQ=255) cATCAGCCGAAGTCGGTAAAAGAAGCGCTTAGCTACACGCCGGGTGTCTCTGTTCCTACGCGTGGCGAATCCAACACCTA‑TGACCACCTGATCATTCGCGGCTTTGCGGCAGAAGGCCAAAGCCAGAATAACTATCTGAATGGCCTGaa < 3:28874/149‑1 (MQ=255) aTCAGCCGAAGTCGGTAAAAGAAGCGCTTAGCTACACGCCGGGTGTCTCTGTTGGTACGCGTGGCGCATCCAACACCTATTGACCACCTGATCATTCGCGGCTTTGCGGCAGAAGGCCAAAGCCAGAATAACTATCTGAATGGCCTg > 4:139817/1‑147 (MQ=255) aTCAGCCGAAGTCGGTAAAAGAAGCGCTTAGCTACACGCCGGGTGTCTCTGTTGGTACGCGTGGCGCATCCAACACCTATTGACCACCTGATCATTCGCGGCTTTGCGGCAGAAGGCCAAAGCCAGAATAACTATCTGAATGGCCTGaa < 2:405052/149‑1 (MQ=255) aGCCGAAGTCGGTAAAAGAAGCGCTTAGCTACACGCCGGGTGTCTCTGTTGGTACGCGTGGCGCATCCAACACCTATTGACCACCTGATCATTCGCGGCTTTGCGGCAGAAGGCCAAAGCCAGAATAACTATCTGAATGGcc < 1:471530/142‑1 (MQ=255) aGCCGAAGTCGGTAAAAGAAGCGCTTAGCTACACGCCGGGTGTCTCTGTTGGTACGCGTGGCGCATCCAACACCTATTGACCACCTGATCATTCGCGGCTTTGCGGCAGAAGGCCAAAGCCAGAATAACTATCTGAATGGcc > 2:471530/1‑142 (MQ=255) aGCCGAAGTCGGTAAAAGAAGCGCTTAGCTACACGCCGGGTGTCTCTGTTGGTACGCGTGGCGCATCCAACACCTA‑TGACCACCTGATCATTCGCGGCTTTGCGGCAGAAGGCCAAAGcc > 4:190374/1‑120 (MQ=255) aGCCGAAGTCGGTAAAAGAAGCGCTTAGCTACACGCCGGGTGTCTCTGTTGGTACGCGTGGCGCATCCAACACCTA‑TGACCACCTGATCATTCGCGGCTTTGCGGCAGAAGGCCAAAGcc < 3:190374/120‑1 (MQ=255) ccGAAGTCGGTAAAAGAAGCGCTTAGCTACACGCCGGGTGTCTCTGTTGGTACGCGTGGCGCATCCAACACCTA‑TGACCACCTGATCATTCGCGGCTTTGCGGCAGAAGGCCAAAGCCAGAATAACTATCTGAATGGCCTGAAGTTg > 1:103672/1‑147 (MQ=255) cGAAGTCGGTAAAAGAAGCGCTTAGCTACACGCCGGGTGTCTCTGTTGGTACGCGTGGCGCATCCAACACCTATTGACCACCTGATCATTCGCGGCTTTGCGGCAGAAGGCCAAAGCCAGAATAACTATCTGAATGGCCTGAAGTTGCa < 7:398209/149‑1 (MQ=255) cGAAGTCGGTAAAAGAAGCGCTTAGCTACACGCCGGGTGTCTCTGTTGGTACGCGTGGCGCATCCAACACCTA‑TGACCACCTGATCATTCGCGGCTTTGCGGCAGAAGGCCAAAGCCAGAATAACTATCTGAATGGCCTGAAGTTGCAg < 8:287978/149‑1 (MQ=255) aaGTCGGTAAAAGAAGCGCTTAGCTACACGCCGGGTGTCTCTGTTGGTACGCGTGGCGCATCCAACACCTATTGACCACCTGATCATTCGCGGCTTTGCGGCAGAAGGCCAAAGCCAGAATAACTATCTGAATGGCCTGAAGTTGCAgg < 3:139817/149‑1 (MQ=255) gTCGGTAAAAGAAGCGCTTAGCTACACGCCGGGTGTCTCTGTTGGTACGCGTGGCGCATCCAACACCTATTGACCACCTGATCATTCGCGGCTTTGCGGCAGAAGGCCAAAGCCAGAATAACTATCTGAATGGCCTGAAGTTGCAGGGc < 7:278988/149‑1 (MQ=255) tCGGTAAAAGAAGCGCTTAGCTACACGCCGGGTGTCTCTGTTGGTACGCGTGGCGCATCCAACACCTATTGACCACCTGATCATTCGCGGCTTTGCGGCAGAAGGCCAAAGCCAGAATAACTATCTGAATGGCCTGAAGTTGCAGGGc > 6:215023/1‑148 (MQ=255) ggTAAAAGAAGCGCTTAGCTACACGCCGGGTGTCTCTGTTGGTACGCGTGGCGCATCCAACACCTA‑TGACCACCTGATCATTCGCGGCTTTGCGGCAGAAGGCCAAAGCCAGAATAACTGTCTGAATGGCCTGAAGTTGCAGGGCAACt > 7:322942/1‑149 (MQ=255) tAAAAGAAGCGCTTAGCTACCCGCCGGGTGTCTCTGTTGGTACGCGTGGCGCATCCAACACCTATTGACCACCTGATCATTCGCGGCTTTGCGGCAGAAGGCCAAAGCCAGAATAACTATCTGAATGGCCTGAAGTTGCAGGGCAACtt > 1:272951/1‑149 (MQ=255) aaaaGAAGCGCTTAGCTACACGCAGGGTGTCTCTGTTGGTACGCGTGGCGCATCCAACACCTATTGACCACCTGATCATTCGCGGCTTTGCGGCAGAAGGCCAAAGCCAGAATAACTATCTGAATGGCCTGAAGTTGCAGGGCAACtt > 3:94964/1‑148 (MQ=255) gaagCGCTTAGCTACACGCCGGGTGTCTCTGTTGGTACGCGTGGCGCATCCAACACCTA‑TGACCACCTGATCATTCGCGGCTTTGCGGCAGAAGGCCAAAGCCAGAATAACTATCTGAATGGCCTGAAGTTGCAGGGCAACTTCTATaa < 6:152901/149‑1 (MQ=255) gaagCGCTTAGCTACACGCCGGGTGGCTCTGTTGGTACGCGTGGCGCATCCAACACCTATTGACCACCTGATCATTCGCGGCGTTGCGGCAGAAGGCCTAAGCCAGATTATCTATCTGAATGGCCTGAAGTTGCAGGGCAACTTCtata < 8:456087/149‑1 (MQ=255) agCGCTTAGCTACACGCCGTGTGTCTCTGTTGGTACGCGTGGCGCATCGAACACCTATTGACCACCTGATCATTCGCGGCTTTGCGGCAGAAGGCCAAAGCCAGAATAACTATCTGAATTGCCTGAAGTTGCAGGGCATCTTCTATAAc < 4:94964/149‑1 (MQ=255) agCGCTTAGCTACACGCCGGGTGTCTCTGTTGGTACGCGTGGCGCATCCAACACCTA‑TGACCACCTGATCATTCGCGGCTTTGCGGGAGAAGGCCAAAGCCAGAATAACTATCTGAATGGCCTGAAGTTGCAGGGCAACTTCTATAAc < 8:223867/148‑1 (MQ=255) ttAGCTACACGCCGGGTGTCTCTGTTGGTACGCGTGGCGCATCCAACACCTATTGACCACCTGATCATTCGCGGCTTTGCGGCAGAAGGCCAAAGCCAGAATAACTATCTGAATGGCCTGAAGTTGCAGGGCAACTTCTATAACGATGc > 3:173866/1‑149 (MQ=255) tACACGCCGGGTGTCTCTGTTGGTACGCGTGGCGCATCCAACACCTATTGACCACCTGATCATTCGCGGCTTTGCGGCAGAAGGCCAAAGCCAGAATAACTATCTGAATGGCCTGAAGTTGCAGGGCAACTTCTATAACGATGCGGTCa > 2:206231/1‑149 (MQ=255) acacGCCGGGTGTCTCTGTTGGTACGCGTGGCGCATCCAACACCTATTGACCACCTGATCATTCGCGGCTTTGCGGCAGAAGGCCAAAGCCAGAATAACTATCTGAATGGCCTGAAGTTGCAGGGCAACTTCTATAACGATGCGGTCAt > 5:304400/1‑149 (MQ=255) acGCCGGGTGTCTCTGTTGGTACGCGTGGCGCATCCAACACCTATTGACCACCTGATCATTCGCGGCTTTGCGGCAGAAGGCCAAAGCCAGAATAACTATCTGAATGGCCTGAAGTTGCAGGGCAACTTCTATAACGATGCGGTCATTg > 2:199562/1‑149 (MQ=255) cGCCGGGTGTCTCTGTTGGTACGCGTGGCGCATCCAACACCTATTGACCACCTGATCATTCGCGGCTTTGCGGCAGAAGGCCAAAGCCAGAATAACTATCTGAATGGCCTGAAGTTGCAGGGCAACTTCTATAACGATGCGGTCATTGa < 6:304400/149‑1 (MQ=255) gCCGGGTGTCTCTGTTGGTACGCGTGGCGCATCCAACACCTATTGACCACCTGATCATTCGCGGCTTTGCGGCAGAAGGCCAAAGCCAGAATAACTATCTGAATGGCCTGAAGTTGCAGGGCAACTTCTATAACGATGCGGTCATTGAc > 7:360645/1‑149 (MQ=255) cGGGTGTCTCTGTTGGTACGCGTGGCGCATCCAACACCTATTGACCACCTGATCATTCGCGGCTTTGCGGCAGAAGGCCAAAGCCAGAATAACTATCTGAATGGCCTGAAGTTGCAGGGCAACTTCTATAACGATGCGGTCATTGAccc < 1:199562/149‑1 (MQ=255) tctGTTGGTACGCGTGGCGCATCCAACACCTATTGACCACCTGATCATTCGCGGCTTTGCGGCAGAAGGCCAAAGCCAGAATAACTATCTGAATGGCCTGAAGTTGCAGGGCAACTTCTATAACGATGCGGTCATTGACCCGTATATGc > 1:360541/1‑149 (MQ=255) tctGTTGGTACGCGTGGCGCATCCAACACCTATTGACCACCTGATCATTCGCGGCTTTGCGGCAGAAGGCCAAAGCCAGAATAACTATCTGAATGGCCTGAAGTTGCAGGGCAACTTCTATAACGATGCGGTCATTGACCCGTATATGc > 8:63675/1‑149 (MQ=255) tctGTTGGTACGCGTGGCGCATCCAACACCTA‑TGACCACCTGATCATTCGCGGCTTTGCGGCAGAAGGCCAAAGCCAGAATAACTATCTGAATGGCCTGAAGTTGCAGGGCAACTTCTATAACGATGCGGTCATTGACCCGTATATGCt > 2:218085/1‑149 (MQ=255) tctGTTGGTACGCGTGGCGCATCCAACACCTA‑TGACCAACTGATCATTCGCGGCTTTGCGGCAGAAGGCCAAAGCCAGCATAACTATCTGAATGGCCTGAAGTTGCAGGGCAACTTCTATAACGATGCGGTCATTGACCCGTATATGCt > 5:283769/1‑149 (MQ=255) tctGTTGGTACGCGTGGAGCATCCAACACCTATTGACCACCTGATCATTCGCGGCTTTGCGGCAGAAGGCCAAAGCCAGAATAACTATCTGAATGGCCTGAAGTTGCAGGGCAACTTCTATAACGATGCGGTCATTGACCCGTATATGc > 6:194876/1‑149 (MQ=255) gTTGGTACGCGTGGCGCATCCAACACCTATTGACCACCTGATCATTCGCGGCTTTGCGGCAGAAGGCCAAAGCCAGAATAACTATCTGAATGGCCTGAAGTTGCAGGGCAACTTCTATAACGATGCGGTCATTGACCCGTATATGCTg > 2:401018/1‑148 (MQ=255) gTTGGTACGCGTGGCGCATCCAACACCTATTGACCACCTGATCATTCGCGGCTTTGCGGCAGAAGGCCAAAGCCAGAATAACTATCTGAATGGCCTGAAGTTGCAGGGCAACTTCTATAACGATGCGGTCATTGACCCGTATATGCTg > 6:263126/1‑148 (MQ=255) ttGGTACGCGTGGCGCATCCAACACCTATTGACCACCTGATCATTCGCGGCTTTGCGGCAGAAGGCCAAAGCCAGAATAACTATCTGAATGGCCTGAAGTTGCAGGGCAACTTCTATAACGATGCGGTCATTGACCCGTATATGCTgg > 7:49435/1‑148 (MQ=255) ttGGTACGCGTGGCGCATCCAACACCTATTGACCACCTGATCATTCGCGGCTTTGCGGCAGAAGGCCAAAGCCAGAATAACTATCTGAATGGCCTGAAGTTGCAGGGCAACTTCTATAACGATGCGGTCATTGACCCGTATATGCTgg < 6:154783/148‑1 (MQ=255) ttGGTACGCGTGGCGCATCCAACACCTATTGACCACCTGATCATTCGCGGCTTTGCGGCAGAAGGCCAAAGCCAGAATAACTATCTGAATGGCCTGAAGTTGCAGGGCAACTTCTATAACGATGCGGTCATTGACCCGTATATGCTg < 4:173866/147‑1 (MQ=255) ggTACGCGTGGCGCATCCAACACCTATTGACCACCTGATCATTCGCGGCTTTGCGGCAGAAGGCCAAAGCCAGAATAACTATCTGAATGGCCTGAAGTTGCAGGGCAACTTCTATAACGATGCGGTCATTGACCCGTATATGCTGGaa < 5:215023/148‑1 (MQ=255) gcgTGGCGCATCCAACACCTATTGACCACCTGATCATTCGCGGCTTTGCGGCAGAAGGCCAAAGCCAGAATAACTATCTGAATGGCCTGAAGTTGCAGGGCAACTTCTATAACGATGCGGTCATTGAc > 7:391507/1‑128 (MQ=255) gcgTGGCGCATCCAACACCTATTGACCACCTGATCATTCGCGGCTTTGCGGCAGAAGGCCAAAGCCAGAATAACTATCTGAATGGCCTGAAGTTGCAGGGCAACTTCTATAACGATGCGGTCATTGAc < 8:391507/128‑1 (MQ=255) ccAACACCTA‑TGACCACCTGATCATTCGCGGCTTTGCGGCAGAAGGCCAAAGCCAGAATAACTATCTGAATGGCCTGAAGTTGCAGGGCAACTTCTATAACGATGCGGTCATTGACCCGTATATGCTGGAACGCGCTGAAATTATGCGt > 7:43693/1‑149 (MQ=255) cAACACCTA‑TGACCACCTGATCATTCGCGGCTTTGCGGCAGAAGGCCAAAGCCAGAATAACTATCTGAATGGCCTGAAGTTGCATGGCAACTTCTATAACGATGCGGTCATTGACCCGTATATGCTGGAACGCGCTGAAATTATGCGt < 3:393247/148‑1 (MQ=255) aaCACCTATTGACCACCTGATCATTCGCGGCTTTGCGGCAGAAGGCCAAAGCCAGAATAACTATCTGAATGGCCTGAAGTTGCAGGGCAACTTCTATAACGATGCGGTCATTGACCCGTATATGCTGGAACGCGCTGAAATTATGCGTg > 6:275450/1‑149 (MQ=255) aaCACCTATTGACCACCTGATCATTCGCGGCTTTGCGGCAGAAGGCCAAAGCCAGAATAACTATCTGAATGGCCTGAAGTTGCAGGGCAACTTCTATAACGATGCGGTCATTGACCCGTATATGCTGGAACGCGCTGAAATTATGCGTg > 8:314169/1‑149 (MQ=255) aaCACCTA‑TGACCACCTGATCATTCGCGGCTTTGCGGCAGAAGGCCAAAGCCAGAATAACTATCTGAATGGCCTGAAGTTGCAGGGCAACTTCTATAACGATGCGGTCATTGACCCGTATATGCTGGAACGCGCTGAAAtt > 8:59195/1‑141 (MQ=255) aaCACCTA‑TGACCACCTGATCATTCGCGGCTTTGCGGCAGAAGGCCAAAGCCAGAATAACTATCTGAATGGCCTGAAGTTGCAGGGCAACTTCTATAACGATGCGGTCATTGACCCGTATATGCTGGAACGCGCTGAAAtt < 7:59195/141‑1 (MQ=255) cTA‑TGACCACCTGATCATTCGCGGCTTTGCGGCAGAAGGCCAAAGCCAGAATAACTATCTGAATGGCCTGAAGTTGCAGGGCAACTTCTATAACGATGCGGTCATTGACCCGTATATGCTGGAACGCGCTGAAATTATGCGTGGCCCgg > 5:251074/1‑149 (MQ=255) | ACCGATACGCCGATTCAAAAAGTGCCACAGTCTATTTCTGTTGTGACCGCCGAAGAGATGGCGCTGCATCAGCCGAAGTCGGTAAAAGAAGCGCTTAGCTACACGCCGGGTGTCTCTGTTGGTACGCGTGGCGCATCCAACACCTA‑TGACCACCTGATCATTCGCGGCTTTGCGGCAGAAGGCCAAAGCCAGAATAACTATCTGAATGGCCTGAAGTTGCAGGGCAACTTCTATAACGATGCGGTCATTGACCCGTATATGCTGGAACGCGCTGAAATTATGCGTGGCCCGG > NC_000913/167697‑167988 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |