| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 2231069 = | 79 (0.780) | 4 (0.040) | 4/244 | NT | 5.2% | coding (51/696 nt) | yohK | LrgB family inner membrane protein |
| ? | NC_000913 | 2231091 = | 70 (0.740) | coding (73/696 nt) | yohK | LrgB family inner membrane protein | |||||
CCGGTTGCAGCAGATCGTTTAGCACTTCGCTACCTTTAAAGTAGCTGTCGTAAGAGATGCCAGTCAGCATTAAAAAAGGAATGATCACCACCATTGCTACCAGCAACGGGTTAAGCAAGGGAAACTTATACCGTGCCGCCAGTTTGCGGGCGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/2231223‑2231069‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcggcaCGGTATAAGTTTCCCTTGCTTAACCCGTTGCTGGTAGCAATGGTGGTGATCATTCCTTTTTTAATGCTGACTGGCATCTCTTACGACAGCTACTTTAAAGGTAGCGAAGTGCTAAACGATCTGCTGCAACCGGCGGTCGTCGCGCTG > NC_000913/2231091‑2231237 CCGGTTGCAGCAGATCGTTTAGCACTTCGCTACCTTTAAAGTAGCTGTCGTAAGAGATGCCAGTCAGCATTAAAAAAGGAATGATCACCACCATTGCTACCAGCAACGGGTTAAGCAAGGGAAACTTATACCGTGCCGCCAGTTTGCGG > 4:327667/1‑149 TTATACCGTGCCGCCAGTTTGCGGGCGGCACGGTATAAGTTTCCCTTGCTTAACCCGTTGCTGGTAGCAATGGTGGTGATCATTCCTTTTTTAATGCTGACTGGCATCTCTTA > 5:134555/1‑113 TTATACCGTGCCGCCAGTTTGCGGGCGGCACGGTATAAGTTTCCCTTGCTTAACCCGTTGCTGGTAGCAATGGTGGTGATCATTCCTTTTTTAATGCTGACTGGCATCTCTTA < 6:134555/113‑1 TACCGTGCCGCCAGTTTGCGGGCGGCACGGTATAAGTTTCCCTTGCTTAACCCGTTGCTGGTAGCAATGGTGGTGATCATTCCTTTTTTAATG > 7:446775/1‑93 TACCGTGCCGCCAGTTTGCGGGCGGCACGGTATAAGTTTCCCTTGCTTAACCCGTTGCTGGTAGCAATGGTGGTGATCATTCCTTTTTTAATG < 8:446775/93‑1 CACGGTATAAGTTTCCCTTGCTTAACCCGTTGCTGGTAGCAATGGTGGTGATCATTCCTTTTTTAATGCTGACTGGCATCTCTTACGACAGCTACTTTAAAGGTAGCGAAGTGCTAAACGATCTGCTGCAACCGGCGGTCGTCGCGCTG < 3:324710/149‑1 CCGGTTGCAGCAGATCGTTTAGCACTTCGCTACCTTTAAAGTAGCTGTCGTAAGAGATGCCAGTCAGCATTAAAAAAGGAATGATCACCACCATTGCTACCAGCAACGGGTTAAGCAAGGGAAACTTATACCGTGCCGCCAGTTTGCGGGCGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/2231223‑2231069‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcggcaCGGTATAAGTTTCCCTTGCTTAACCCGTTGCTGGTAGCAATGGTGGTGATCATTCCTTTTTTAATGCTGACTGGCATCTCTTACGACAGCTACTTTAAAGGTAGCGAAGTGCTAAACGATCTGCTGCAACCGGCGGTCGTCGCGCTG > NC_000913/2231091‑2231237 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |