| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 3087880 = | NA (NA) | 6 (0.060) | 5/238 | NT | NA | intergenic (+20/‑404) | metK/galP | S‑adenosylmethionine synthetase/D‑galactose transporter |
| ? | NC_000913 | 3087905 = | NA (NA) | intergenic (+45/‑379) | metK/galP | S‑adenosylmethionine synthetase/D‑galactose transporter | |||||
CTTTGTCTGTTGTGGTTGGTGTAATCGGTTTCAGTTGTGATGATAATCTGCGGTGAAACGTGATCAGGAAGAATGATGTTATTGTGCGGGCGGTTTTTTTGCCGGATGCGGCGTGAACGCCTATCCAAAAGAAAAAGGCCAGCGCGAGGCTGGCCTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3088037‑3087880‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctggcctttTTCTTTTGGATAGGCGTTCACGCCGCATCCGGCAAAAAAACCGCCCGCACAATAACATCATTCTTCCTGATCACGTTTCACCGCAGATTATCATCACAACTGAAACCGATTACACCAACCACAACAGACAAAGATTTGTAATATTTT > NC_000913/3087905‑3088051 CTTTGTCTGTTGTGGTTGGTGTAATCGGTTTCAGTTGTGATGATAATCTGCGGTGAAACGTGATCAGGAAGAATGATGTTATTGTGCGGGCGGATTTTTTGCCGCATGCTGCGTGAACGCCTATCAAAAAGAAAAAGGCCAGCGCGAGG > 4:140626/1‑149 GTCTGTTGTGGTTGGTGTAATCGGTTTCAGTTGTGATGATAATCTGCGGTGAAACGTGATCAGGAAGAATGATGTTATTGTGCGGGCGGTTTTTTTGCCGGATGCGGCGTGAACGCCTATCCAAAAGAAAAAGGCCAGCGCGAGGCTG < 8:454454/148‑1 TTGTGGTTGGTGTAATCGGTTTCAGTTGTGATGATAATCTGCGGTGAAACGTGATCAGGAAGAATGATGTTATTGTGCGGGCGGTTTTTTTGCCGGATGCGGCGTGAACGCCTATCCAAAAGAAAAAGGCCAGCGCGAGGCTGGCCTTT < 6:65404/149‑1 TTGTGGTTGGTGTAATCGGTTTCAGTTGTGATGATAATCTGCGGTGAAACGTGATCAGGAAGAATGATGTTATTGTGCGGGCGGTTTTTTTGCCGGATGCGGCGTGAACGCCTATCCAAAAGAAAAAGGCCAGCGCGAGGCTGGCCTT < 1:298690/148‑1 TTGTGGTTGGTGTAATCGGTTTCAGTTGTGATGATAATCTGCGGTGAAACGTGATCAGGAAGAATGATGTTATTGTGCGGGCGGTTTTTTTGCCGGATGCGGCGTGAACGCCTATCCAAAAGAAAAAGGCCAGCGCGAGGCTGGCCTT < 2:276453/148‑1 TTGTGGTTGGTGTAATCGGTTTCAGTTGTGATGATAATCTGCGGTGAAACGTGATCAGGAAGAATGATGTTATTGTGCGGGCGGTTTTTTTGCCGGATGCGGCGTGAACGCCTATCCAAAAGAAAAAGGCCAGCGCGAGGCTGGCCTT < 2:385438/148‑1 GGTGTAATCGGTTTCAGTTGTGATGATAATCTGCGGTGAAACGTGATCAGGAAGAATGATGTTATTGTGCGGGCGGTTTTTTTGCCGGATGCGGCGTGAACGCCTATCCAAAAGAAAAAGGCCAGCCTTGCGCTGGCCTTTTTCTTTT < 1:195456/148‑1 ATCGGTTTCAGTTGTGATGATAATCTGCGGTGAAACGTGATCAGGAAGAATGATGTTATTGTGCGGGCGGTTTTTTTGCCGGATGCGGCGTGAACGCCTATCCAAAAGAAAAAGGCCAGCCTCGCGCTGGCCTTTTTCTTTTGGATAG < 2:381327/148‑1 GTTTCAGTTGTGATGATAATCTGCGGTGAAACGTGATCAGGAAGAATGATGTTATTGTGCGGGCGGTTTTTTTGCCGGATGCGGCGTGAACGCCTATCCAAAAGAAAAAGGCCAGCGCGAGGCTGGCCTTT < 1:180754/131‑1 GTTTCAGTTGTGATGATAATCTGCGGTGAAACGTGATCAGGAAGAATGATGTTATTGTGCGGGCGGTTTTTTTGCCGGATGCGGCGTGAACGCCTATCCAAAAGAAAAAGGCCAGCGCGAGGCTGGCCTTT > 2:180754/1‑131 TTGTGATGATAATCTGCGGTGAAACGTGATCAGGAAGAATGATGTTTTTGTGCGGGCGGTTTTTTTGCCGGATGCGGCGTGAAGGCCTATCCAAAAGAAAAAGGCCAGCCTCGCGCTGGCCTTTTTCTTTTGGATAGGCGTTCACGCC < 6:226986/148‑1 GAAGAATGATGTTATTGTGCGGGCGGTTTTTTTGCCGGATGCGGCGTGAACGCCTATCCAAAAGAAAAAGGCCAGCCTCGCGCTGGCCTTTTTCTTTT > 8:139566/1‑98 GAAGAATGATGTTATTGTGCGGGCGGTTTTTTTGCCGGATGCGGCGTGAACGCCTATCCAAAAGAAAAAGGCCAGCCTCGCGCTGGCCTTTTTCTTTT < 7:139566/98‑1 AAAGGCCAGCGCGAGGCTGGCCTTTTTCTTTTGGATAGGCGTTCACGCCGCATCCGGCAAAAAAACCGCCCGCACAATAACATCATTCTTCCTGATCACGTTTCACCGCAGATTATCATCACAACTGAAACCGATTACACCAACCACAA > 8:93108/1‑149 CTGGCCTTTTTCTTTTGGATAGGCGTTCACGCCGCATCCGGCAAAAAAACCGCCCGCACAATAACATCATTCTTCCTGATCACGTTTCACCGCAGATTATCATCACAACTGAAACCGATTACACCAACCACAACAGACAAAGATTTGTA < 7:93108/149‑1 CTGGCCTTTTTCTTTTGGATAGGCGTTCACGCCGCATCCGGCAAAAAAACCGCCCGCACAATAACATCATTCTTCCTGATCACGTTTCACCGCAGATTATCATCACAACTGAAACCGATTACACCAACCACAACAGACAAAGATTTGTA < 1:276453/149‑1 GCCTTTTTCTTTTGGATAGGCGTTCACGCCGCATCCGGCAAAAAAACCGCCCGCACAATAACATCATTCTTCCTGATCACGTTTCACCGCAGATTATCATCACAACTGAAACCGATTACACCAACCACAACAGACAAAGATTTGTAA < 3:315675/147‑1 GCCTTTTTCTTTTGGATAGGCGTTCACGCCGCATCCGGCAAAAAAACCGCCCGCACAATAACATCATTCTTCCTGATCACGTTTCACCGCAGATTATCATC < 7:217547/101‑1 GCCTTTTTCTTTTGGATAGGCGTTCACGCCGCATCCGGCAAAAAAACCGCCCGCACAATAACATCATTCTTCCTGATCACGTTTCACCGCAGATTATCATC > 8:217547/1‑101 TTTTTCTTTTGGATAGGCGTTCACGCCGCATCCGGCAAAAAAACCGCCCGCACAATAACATCATTCTTCCTGATCACGTTTCACCGCAGATTATCATCACAACTGAAACCGATTACACCAACCACAACAGACAAAGATTTGTAATATTT > 2:322815/1‑149 TTTTTCTTTTGGATAGGCGTTCACGCCGCATCCGGCAAAAAAACCGCCCGCACAATAACATCATTCTTCATGATCACGTTTCACCGCAGATTATCATCACAACTGAAACCGATTACACCAACCACAACAGACAAAGATTTGTAATATTT > 8:365359/1‑149 TTTTCTTTTGGATAGGCGTTCACGCCGCATCCGGCAAAAAAACCGCCCGCACAATAACATCATTCTTCCTGATCACGTTTCACCGCAGATTATCATCACAACTGAAACCGATTATACCAACCACAACAGACAAAGATTTGTAATATTTT > 5:209037/1‑149 CTTTGTCTGTTGTGGTTGGTGTAATCGGTTTCAGTTGTGATGATAATCTGCGGTGAAACGTGATCAGGAAGAATGATGTTATTGTGCGGGCGGTTTTTTTGCCGGATGCGGCGTGAACGCCTATCCAAAAGAAAAAGGCCAGCGCGAGGCTGGCCTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3088037‑3087880‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctggcctttTTCTTTTGGATAGGCGTTCACGCCGCATCCGGCAAAAAAACCGCCCGCACAATAACATCATTCTTCCTGATCACGTTTCACCGCAGATTATCATCACAACTGAAACCGATTACACCAACCACAACAGACAAAGATTTGTAATATTTT > NC_000913/3087905‑3088051 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |