New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 1115624 =NA (NA)5 (0.050) 5/236 NT NA intergenic (‑134/+38) mdtG/lpxL putative drug efflux system protein/lauryl‑acyl carrier protein (ACP)‑dependent acyltransferase
?NC_000913 1115655 = NA (NA)intergenic (‑165/+7) mdtG/lpxL putative drug efflux system protein/lauryl‑acyl carrier protein (ACP)‑dependent acyltransferase

Only 100 of 109 total aligned reads displayed.

TCACAGGGTGACATAGCAATCCGCTGTTGGTGCGCCAGGCGCGGTGAACATAAGAAGAAAAGATAAGCACACTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGCCGGATGCCATTCTGAA‑‑GCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCGTGTTTTAAAGCGACGGTGTAACCACATATACTGCTCTGGTGCCATCATGATGCATTTTTCGACCACTTTGTTCATCCACG  >  NC_000913/1115477‑1115771
                                                                                                                                                   |                                                                                                                                                     
cgccactggatgatgccgaaactaccgccgcgtggatgaacaaagtggtcgaaaaatgcatcatgatggcaccagagcagtatatgtggttacaccgtcgctttaaaacacgcccggaaggcgttccttcacgctattaaatctccca                                                                                                                                                       >  7:85875‑M1/148‑148 (MQ=255)
  acaGGGTGACATAGCAATCCGCTGTTGGTGCGCCAGGCGCGGTGAACATAAGAAGAAAAGATAAGCACACTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGc                                                                                                                                                    <  7:464631/149‑1 (MQ=255)
    actggatgatgccgaaactaccgccgcgtggatgaacaaagtggtcgaaaaatgcatcatgatggcaccagagcagtatatgtggttacaccgtcgctttaaaacacgcccggaaggcgttccttcacgctattaaatctcccATGCCg                                                                                                                                                  >  6:3841‑M1/144‑149 (MQ=255)
    actggatgatgccgaaactaccgccgcgtggatgaacaaagtggtcgaaaaatgcatcatgatggcaccagagcagtatatgtggttacaccgtcgctttaaaacacgcccggaaggcgttccttcacgctattaaatctcccATGCCg                                                                                                                                                  <  3:354989‑M1/6‑1 (MQ=255)
    aGGGTGACATAGCAATCCGCTGTTGGTGCGCCAGGCGCGGTGAACATAAGAAGAAAAGATAAGCACACTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGCCg                                                                                                                                                  >  6:335959/1‑149 (MQ=255)
      ggTGACATAGCAATCCGCTGTTGGTGCGCCAGGCGCGGTGAACATAAGAAGAAAAGATAAGCACACTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGCCGGa                                                                                                                                                <  1:125923/149‑1 (MQ=255)
       gTGACATAGCAATCCGCTGTTGGTGCGCCAGGCGCGGTGAACATAAGAAGAAAAGATAAGCACACTTATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGCCGGAt                                                                                                                                               <  3:126828/149‑1 (MQ=255)
            aTAGCAATCCGCTGTTGGTGCGCCAGGCGCGGTGAACATAAGAAGAAAAGATAAGCACACTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGCCGGATGCCAt                                                                                                                                          >  8:324007/1‑149 (MQ=255)
            aTAGCAATCCGCTGTTGGTGCGCCAGGCGCGGTGAACATAAGAAGAAAAGATAAGCACACTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGCCGGATGCCAt                                                                                                                                          >  2:249131/1‑149 (MQ=255)
            aTAGCAATCCGCTGTTGGTGCGCCAGGCGCGGTGAACATAAGAAGAAAAGATAAGCACACTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGCCGGATGCCAt                                                                                                                                          >  6:20677/1‑149 (MQ=255)
             tAGCAATCCGCTGTTGGTGCGCCAGGCGCGGTGAACATAAGAAGAAAAGATAAGCACACTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGc                                                                                                                                                    >  3:358000/1‑138 (MQ=255)
             tAGCAATCCGCTGTTGGTGCGCCAGGCGCGGTGAACATAAGAAGAAAAGATAAGCACACTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGc                                                                                                                                                    <  4:358000/138‑1 (MQ=255)
              aGCAATCCGCTGTTGGTGCGCCAGGCGCGGTGAACATAAGAAGAAAAGATAAGCACACTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGCCGGATGCCATTc                                                                                                                                        >  7:16918/1‑149 (MQ=255)
               gCAATCCGCTGTTGGTGCGCCAGGCGCGGTGAACATAAGAAGAAAAGATAAGCACACTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGCCGGATGCCATTc                                                                                                                                        <  7:122029/148‑1 (MQ=255)
                 aaTCCGCTGTTGGTGCGCCAGGCGCGGTGAACATAAGAAGAAAAGATAAGCACACTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGCCGGATGCCATTCTg                                                                                                                                      >  7:449521/1‑148 (MQ=255)
                 aaTCCGCTGTTGGTGCGCCAGGCGCGGTGAACATAAGAAGAAAAGATAAGCACACTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGCCGGATGCCATTCTg                                                                                                                                      >  5:238415/1‑148 (MQ=255)
                 aaTCCGCTGTTGGTGCGCCAGGCGCGGTGAACATAAGAAGAAAAGATAAGCACACTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGCCGGATGCCATTCTGa                                                                                                                                     <  2:53586/149‑1 (MQ=255)
                  aTCCGCTGTTGGTGCGCCAGGCGCGGTGAACATAAGCAGAAAAGATAAGCACACTAATTATGCGCCCTACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGCCGGATGCCTTTCTGaa                                                                                                                                    <  1:341596/149‑1 (MQ=255)
                  aTCCGCTGTTGGTGCGCCAGGCGCGGTGAACATAAGAAGAAAAGATAAGCACACTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGCCGGATGCCATTCTGaa                                                                                                                                    <  1:435940/149‑1 (MQ=255)
                  aTCCGCTGTTGGTGCGCCAGGCGCGGTGAACATAAGAAGAAAAGATAAGCACACTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGCCGGATGCCATTCTGaa                                                                                                                                    <  1:419424/149‑1 (MQ=255)
                  aTCCGCTGTTGGTGCGCCAGGCGCGGTGAACATAAGAAGAAAAGATAAGCACACTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGCCGGATGCCATTCTGaa                                                                                                                                    <  6:245867/149‑1 (MQ=255)
                  aTCCGCTGTTGGTGCGCCAGGCGCGGTGAACATAAGAAGAAAAGATAAGCACACTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGCCGGATGCCATTCTGaa                                                                                                                                    <  1:249131/149‑1 (MQ=255)
                   tCCGCTGTTGGTGCGCCAGGCGCGGTGAACATAAGAAGAAAAGATAAGCACACTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGCCGGATGCCATTCTGAA‑‑g                                                                                                                                 <  5:182427/149‑1 (MQ=255)
                         gTTGGTGCGCCAGGCGCGGTGAACATAAGAAGAAAAGATAAGCACACTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGCCGGATGCCATTCTGAA‑‑GCATCCg                                                                                                                           >  7:377872/1‑149 (MQ=255)
                         gTTGGTGCGCCAGGCGCGGTGAACATAAGAAGAAAAGATAAGCACACTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGCCGGATGCCATTCTGAA‑‑GCATCCg                                                                                                                           >  2:88835/1‑149 (MQ=255)
                          ttGGTGCGCCAGGCGCGGTGAACATAAGAAGAGAAGATAAGCACACTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGCCGGATGCCATTCTGAA‑‑GCATcc                                                                                                                            <  5:130884/147‑1 (MQ=255)
                          ttGGTGCGCCAGGCGCGGTGAACATAAGAAGAAAAGATAAGCACACTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGCCGGATGCCATTCTGAA‑‑GCATCCg                                                                                                                           <  5:218901/148‑1 (MQ=255)
                            cgcgtggatgaacaaagtggtcgaaaaatgcatcatgatggcaccagagcagtatatgtggttacaccgtcgctttaaaacacgcccggaaggcgttccttcacgctattaaatctcccATGCCGGATGCCATTCTGAA‑‑GCATCCGGCa                                                                                                                        >  1:81246‑M1/120‑149 (MQ=255)
                             gTGCGCCAGGCGCGGTGAACATAAGAAGAAAAGATAAGCACACTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGCCGGATGCCATTCTGAA‑‑GCATCCGGCAt                                                                                                                       <  6:341791/149‑1 (MQ=255)
                             gTGCGCCAGGCGCGGTGAACATAAGAAGAAAAGATAAGCACACTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGCCGGATGCCATTCTGAA‑‑GCATCCGGCAt                                                                                                                       <  5:20677/149‑1 (MQ=255)
                                 gcCAGGCGCGGTGAACATAAGAAGAAAAGATAAGCACACTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGCCGGATGCCATTCTGAA‑‑GCATCCGGCATGGga                                                                                                                   <  2:366959/149‑1 (MQ=255)
                                    aGGCGCGGTGAACATAAGAAGAAAAGATAAGCACACTAATTATGCGCCCGCCTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGCCGGATGCCATTCTGAA‑‑GCATCCGGCATGGGAGAt                                                                                                                <  4:219940/149‑1 (MQ=255)
                                     ggCGCGGTGAACATAAGAAGAAAAGATAAGCACACTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGCCGGATGCCATTCTGAA‑‑GCATCCGGCATGGGAGAtt                                                                                                               <  4:126556/149‑1 (MQ=255)
                                         cgGGGACCATAAGAAGAAAATATAGCACACTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTTGTAATGCCGGATGCCATTCTGAA‑‑GCATCCGGCATGGGAGATTTAATa                                                                                                          <  6:49813/149‑1 (MQ=255)
                                          ggTGAACATAAGAAGAAAAGATAAGCACACTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGCCGGATGCCATTCTGAA‑‑GCATCCGGCATGGGAGATTTAATa                                                                                                          <  6:46503/149‑1 (MQ=255)
                                          ggTGAACATAAGAAGAAAAGATAAGCACACTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGCCGGATGCCATTCTGAA‑‑GCATCCGGCATGGGAGATTTAATa                                                                                                          <  5:146667/149‑1 (MQ=255)
                                           gTGAACATAAGAAGAAAAGATAAGCACACTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGCCGGATGCCATTCTGaa                                                                                                                                    >  7:283948/1‑124 (MQ=255)
                                           gTGAACATAAGAAGAAAAGATAAGCACACTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGCCGGATGCCATTCTGaa                                                                                                                                    <  8:283948/124‑1 (MQ=255)
                                            tGAACATAAGAAGAAAAGATAAGCACACTAATTATGCGCCCGACTTCTAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGCCGGATGCCATTCTGAA‑‑GCATCCGGCATGGGAGATTTAATAGc                                                                                                        <  3:242162/149‑1 (MQ=255)
                                                cATAAGAAGAAAAGATAAGCACACTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGCCGGATGCCATTCTGAA‑‑GCATCCGGCATGGGAGATTTAATAGCGTg                                                                                                     >  8:265156/1‑148 (MQ=255)
                                                 aTAAGAAGAAAAGATAAGCACACTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGCCGGATGCCATTCTGAA‑‑GCATCCGGCATGGgag                                                                                                                  <  6:307406/134‑1 (MQ=255)
                                                 aTAAGAAGAAAAGATAAGCACACTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGCCGGATGCCATTCTGAA‑‑GCATCCGGCATGGgag                                                                                                                  >  5:307406/1‑134 (MQ=255)
                                                 aTAAGAAGAAAAGATAAGCACACTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGCCGGATGCCATTCTGAA‑‑GCATCCGGCATGGGAGATTTAATAGCGTGaa                                                                                                   <  3:191070/149‑1 (MQ=255)
                                                  tAAGAAGAAAAGATAAGCACACTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGCCGGATGCCATTCTGAA‑‑GCATCCGGCATGGGAGATTTAATAGCGTGAAg                                                                                                  >  7:235704/1‑149 (MQ=255)
                                                   aagaagAAAAGATAAGCACACTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGCCGGATGCCATTCTGAA‑‑GCATCCGGCATGGGAGATTTAATAGCGTGAAg                                                                                                  >  5:130534/1‑148 (MQ=255)
                                                   aagaagAAAAGATAAGCACACTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGCCGGATGCCATTCTGAA‑‑GCATCCGGCATGGGAGATTTAATAGCGTGAAg                                                                                                  >  4:329419/1‑148 (MQ=255)
                                                   aagaagAAAAGATAAGCACACTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGCCGGATGCCATTCTGAA‑‑GCATCCGGCATGGGAGATTTAATAGCGTGAAg                                                                                                  >  8:146994/1‑148 (MQ=255)
                                                      aagaaAAGATAAGCACACTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGCCGGATGCCATTCTGAA‑‑GCATCCGGCATGGGAGATTTAATAGCGTGAAGGAAc                                                                                              <  2:213242/149‑1 (MQ=255)
                                                      aagaaAAGATAAGCACACTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGCCGGATGCCATTCTGAA‑‑GCATCCGGCATGGGAGATTTAATAGCGTGAAGGAAc                                                                                              <  1:342462/149‑1 (MQ=255)
                                                      aagaaAAGATAAGCACACTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGCCGGATGCCATTCTGAA‑‑GCATCCGGCATGGGAGATTTAATAGCGTGAAGGAAc                                                                                              >  1:213242/1‑149 (MQ=255)
                                                        gaaAAGATAAGCACACTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGCCGGATGCCATTCTGAA‑‑GCATCCGGCAt                                                                                                                       <  4:327278/122‑1 (MQ=255)
                                                        gaaAAGATAAGCACACTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGCCGGATGCCATTCTGAA‑‑GCATCCGGCAt                                                                                                                       >  3:327278/1‑122 (MQ=255)
                                                           aaGATAAGCACACTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGCCGGATGCCATTCTGAA‑‑GCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCtt                                                                                         >  6:108912/1‑149 (MQ=255)
                                                             gATAAGCACACTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGCCGGATGCCATTCTGAA‑‑GCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTcc                                                                                       <  6:130534/149‑1 (MQ=255)
                                                               tAAGCACACTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGCCGGATGCCATTCTGAA‑‑GCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCgg                                                                                     <  3:329419/149‑1 (MQ=255)
                                                                    acacTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGCCGGATGCCATTCTGAA‑‑GCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCgtg                                                                                <  5:200087/149‑1 (MQ=255)
                                                                    acacTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGCCGGATGCCATTCTGAA‑‑GCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCgtg                                                                                >  6:152072/1‑149 (MQ=255)
                                                                    acacTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGCCGGATGCCATTCTGAA‑‑GCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCgtg                                                                                >  8:252389/1‑149 (MQ=255)
                                                                      acTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGCCGGATGCCATTCTGAA‑‑GCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCGTGtt                                                                              >  4:84396/1‑149 (MQ=255)
                                                                      acTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGCCGGATGCCATTCTGAA‑‑GCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCGTGtt                                                                              >  4:78627/1‑149 (MQ=255)
                                                                       cTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGCCGGATGCCATTCTGCA‑‑GCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCGTGttt                                                                             <  7:324007/149‑1 (MQ=255)
                                                                        tAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGCCGGATGCCATTCTGAA‑‑GCATcc                                                                                                                            <  2:115216/101‑1 (MQ=255)
                                                                        tAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGCCGGATGCCATTCTGAA‑‑GCATcc                                                                                                                            >  1:115216/1‑101 (MQ=255)
                                                                        tAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGCCGGATGCCATTCTGAA‑‑GCATCCGGCATGGGAGATTTAATAGc                                                                                                        <  1:100190/121‑1 (MQ=255)
                                                                        tAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGCCGGATGCCATTCTGAA‑‑GCATCCGGCATGGGAGATTTAATAGc                                                                                                        >  2:100190/1‑121 (MQ=255)
                                                                           ttATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGCCGGATGCCATTCTGAA‑‑GCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCGTGTTTTaaa                                                                         <  5:108912/149‑1 (MQ=255)
                                                                           ttATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGCCGGATGCCATTCTGAA‑‑GCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCGTGTTTTaaa                                                                         <  5:280833/149‑1 (MQ=255)
                                                                              tGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGCCGGATGCCATTCTGAA‑‑GCATCCGGCAt                                                                                                                       >  4:84484/1‑100 (MQ=255)
                                                                              tGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGCCGGATGCCATTCTGAA‑‑GCATCCGGCAt                                                                                                                       <  3:84484/100‑1 (MQ=255)
                                                                                 gcCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGCCGGATGCCATTCTGAA‑‑GCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCGTGTTTTAAAGCGACg                                                                   <  6:122457/149‑1 (MQ=255)
                                                                                 gcCCGACTTCCAGGGGGCGCAATCCACACAGCTATTATCGCTAAATCAGGGGGAGTTTCTGTGGTAATCCCGGAAGCCATTCTCAA‑‑GCATCCGCCATGGGAGATTTAATAGCGTCAAAGAACGCCTACCGAGCGTGTTTTAAAGCGACg                                                                   >  4:22673/1‑149 (MQ=255)
                                                                                            aGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGCCGGATGCCATTCTGAA‑‑GCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCGTGTTTTAAAGCGACGGTGTAACcaca                                                        >  7:71954/1‑149 (MQ=255)
                                                                                            aGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGCCGGACGCCATTCTGAA‑‑GCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCGTGTTTTAAAGCGACGGTGTAACcac                                                         >  8:431593/1‑148 (MQ=255)
                                                                                             gggggCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGCCGGATGCCATTCTGAA‑‑GCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCGTGTTTTAAAGCGACGGTGTAACcaca                                                        >  4:37304/1‑148 (MQ=255)
                                                                                                 gcgcAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGCCGGATGCCATTCTGAA‑‑GCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCGTGTTTTAAAGCGACGGTGTAACCACATATAc                                                   <  7:252389/149‑1 (MQ=255)
                                                                                                         cAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGCCGGATGCCATTCTGAA‑‑GCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCGTGTTTTAAAGCGACGGTGTAACCACATATACTGCTCTg                                            <  7:265156/148‑1 (MQ=255)
                                                                                                         cAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGCCGGACGCCATTCTGAA‑‑GCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCGTGTTTTAAAGCGACGGTGTAACCACATATACTGCTCTg                                            <  7:431593/148‑1 (MQ=255)
                                                                                                            agagCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGCCGGATGCCATTCTGAA‑‑GCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCGTGTTTTAAAGCGACGGTGTAACCACat                                                       >  1:260802/1‑134 (MQ=255)
                                                                                                            agagCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGCCGGATGCCATTCTGAA‑‑GCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCGTGTTTTAAAGCGACGGTGTAACCACat                                                       <  2:260802/134‑1 (MQ=255)
                                                                                                            agagCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGCCGGATGCCATTCTGAA‑‑GCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCGTGTTTTAAAGCGACGGTGTAACCACATATACTGCTCTGGTGc                                        >  7:288667/1‑149 (MQ=255)
                                                                                                                 ttttATCGCTAAATCAGGGGGATTTGCTGTGGTAATGCCGGATGCCATTCTGAA‑‑GCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCGTGTTTTAAAGCGACGGTGTAACCACATATACTGCTCTGGTGCcatca                                   >  4:305022/1‑149 (MQ=255)
                                                                                                                 ccggaaggcgttccttcacgctattaaatctcccATGCCGGATGCCATTCTGaa                                                                                                                                    >  1:451268‑M1/35‑54 (MQ=255)
                                                                                                                 ccggaaggcgttccttcacgctattaaatctcccATGCCGGATGCCATTCTGaa                                                                                                                                    <  2:451268‑M1/20‑1 (MQ=255)
                                                                                                                      tCGCTAAATCAGGGGGATTTGCTGTGGTAATGCCGGATGCCATTCTGGA‑‑GCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCGTGTTTTAAAGCGACGGTGTACCCACATATACTGCTCTGGTGCCATCatgatg                              >  4:296106/1‑149 (MQ=255)
                                                                                                                         cTAAATCAGGGGGATTTGCTGTGGTAATGCCGGATGCCATTCTGAA‑‑GCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCGTGTTTTAAAGCGACGGTGTAACCACATATACTGCTCTg                                            >  3:383800/1‑132 (MQ=255)
                                                                                                                                 gggggATTTGCTGTGGTAATGCCGGATGCCATTCTGAA‑‑GCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCGTGTTTTAAAGCGACGGTGTAACCACATATACTGCTCTGGTGCCATCATGATGCATTTTTCGAc                   >  7:374420/1‑149 (MQ=255)
                                                                                                                                  ggggATTTGCTGTGGTAATGCCGGATGCCATTCTGAA‑‑GCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCGTGTTTTAAAGCGACGGTGTAACCACATATACTGCTCTGGTGCCATCATGATGCATTTTTCGAc                   >  4:49411/1‑148 (MQ=255)
                                                                                                                                  ggggATTTGCTGTGGTAATGCCCGATGCCATTCTGAA‑‑GCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCGTGTTTTAAAGCGACGGTGTAACCACATATACTGCTCTGGTGCCATCATCATGCATTTTTCGAc                   >  2:438469/1‑148 (MQ=255)
                                                                                                                                   gggATTTGCTGTGGTAATGCCGGATGCCATTCTGAA‑‑GCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCGTGTTTTAAAGCGACGGTGTAACCACATATACTGCTCTGGTGCCATCATGATGCATTTTTCGACCa                 <  4:80677/149‑1 (MQ=255)
                                                                                                                                   cgctattaaatctcccATGCCGGATGC‑‑TTCAGAATGGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCGTGTTTTAAAGCGACGGTGTAACCACATATACTGCTCTGGTGCCATCATGATGCATTTTTCGACCa                 >  3:342597‑M1/17‑149 (MQ=255)
                                                                                                                                     gATTTGCTGTGGTAATGCCGGATGCCATTCTGAA‑‑GCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCGTGTTTTAAAGCGACGGTGTAACCACATATACTGCTCTGGTGCCATCATGATGCATTTTTCGACCACt               <  8:374420/149‑1 (MQ=255)
                                                                                                                                      tattaaatctcccATGCCGGATGC‑‑TTCAGAATGGCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCGTGTTTTAAAGCGACGGTGTAACCACATATACTGCTCTGGTGCCATCATGATGCATTTTTCGACCACtt              <  3:122548‑M1/136‑1 (MQ=255)
                                                                                                                                       tttGCTGTGGTAATGCCGGATGCCATTCTGAA‑‑GCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCGTGTTTTAAAGCGACGGTGTAACCACATATACTGCTCTGGTGCCATCATGATGCATTTTTCGACCACttt             <  5:335959/149‑1 (MQ=255)
                                                                                                                                          ggtgtgGTATTGCCGGATGACATTCTGAT‑‑GCATCCGGCATGGGAGATTTAATAGGGTGTAGGAACTGCTTCCGGGCGTGTTTTAAAGCGACGGTGTTTGGACATATTCTGCTCTGGTGCCATCATGATGCATTTTTCGACCACTTTGt           <  3:22673/146‑1 (MQ=255)
                                                                                                                                          gCTGTGGTAATGCCGGATGCCATTCTGAA‑‑GCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCGTGTTTTAAAGCGACGGTGTAACCACATATACTGCTCTGGTGCCATCATGATGCATTTTTCGACCACTTTGt           <  6:238415/148‑1 (MQ=255)
                                                                                                                                          gCTGTGGTAATGCCGGATGCCATTCTGAA‑‑GCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCGTGTTTTAAAGCGACGGTGTAACCACATATACTGCTCTGGTGCCATCATGATGCATTTTTCGACCACTTTGt           <  8:288667/148‑1 (MQ=255)
                                                                                                                                                gTAATGCCGGATGCCATTCTGAC‑‑GCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCGTGTTTTAAAGCGACGGTGTAACCACATATACTGCTCTGGTGCCATCATGATGCATTTTTCGACCACTTTGTTCATCCa    >  5:107756/1‑149 (MQ=255)
                                                                                                                                                gTAATGCCGGATGCCATTCTGAA‑‑GCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCGTGTTTTAAAGCGACGGTGTAACCACATATACTGCTCTGGTGCCATCATGATGCATTTTTCGACCACTTTGTTCATCCa    <  3:78627/149‑1 (MQ=255)
                                                                                                                                                gTAATGCCGGATGCCATTCTGAA‑‑GCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCGTGTTTTAAAGCGACGGTGTAACCACATATACTGCTCTGGTGCCATCATGATGCATTTTTCGACCACTTTGTTCATCCa    <  3:84396/149‑1 (MQ=255)
                                                                                                                                                  aaTGCCGGATGCCATTCTGAA‑‑GCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCGTGTTTTAAAGCGACGGTGTAACCACATATACTGCTCTGGTGCCATCATGATGCATTTTTCGACCACTTTGTTCATCCAcg  >  4:5730/1‑149 (MQ=255)
                                                                                                                                                   |                                                                                                                                                     
TCACAGGGTGACATAGCAATCCGCTGTTGGTGCGCCAGGCGCGGTGAACATAAGAAGAAAAGATAAGCACACTAATTATGCGCCCGACTTCCAGGGGGCGCAATCCAGAGAGCTTTTATCGCTAAATCAGGGGGATTTGCTGTGGTAATGCCGGATGCCATTCTGAA‑‑GCATCCGGCATGGGAGATTTAATAGCGTGAAGGAACGCCTTCCGGGCGTGTTTTAAAGCGACGGTGTAACCACATATACTGCTCTGGTGCCATCATGATGCATTTTTCGACCACTTTGTTCATCCACG  >  NC_000913/1115477‑1115771

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.