BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1123496	90 (0.890)	6 (0.060)	4/248	NT	6.1%	coding (559/648 nt)	grxB	glutaredoxin 2 (Grx2)
*	?	NC_000913	= 1123525	98 (1.010)	6 (0.060)	4/248	NT	6.1%	coding (530/648 nt)	grxB	glutaredoxin 2 (Grx2)

Only 100 of 113 total aligned reads displayed.

ATACAGGCTGCCGCGGCGGGTCAGGATTAAATCGCCATTGATGATAACAAATTGATTTGTGTCTGTTTCGCCATATTATCGCGGTAATCAGCAACGCGGCTTGGCCAGTTAATTCCGGCTACCAGCGTCAGATTACGCAGTAGCGGGAATAGCTGAATATCATCTTCCGAAAGTTCGCCATTCACGGCGTTCGGTTTGACGATCAGTTTGTCCAGCGCACGTAAATCATCGCTGATATTCTTAATCAGACCGTCAGAGTGGGCCAGCAGGTCGGCAAAATTACCCGCGCTGGC  >  NC_000913/1123381‑1123673

aTACAGGCTGCCGCGGCGGGTCAGGATTAAATCGCCATTGATGATAACAAATTGATTTGTGTCTGTTTCGCCATATTATCGCGGTAATCAGCAACGCGGCTTGGCCAGTTAATTCCGGCTACCAGCGTCAGATTACGCAGTAGCGggaa                                                                                                                                                  >  8:291001‑M2/1‑145 (MQ=255)

       cTGCCGCGGCGGGTCAGGATTAAATCGCCATTGATGATAACAAATTGATTTGTGTCTGTTTCGCCATATTATCGCGGTAATCAGCAACGCGGCTTGGCCAGTTAATTCCGGCTACCAGCGTCAGATTACGCAGTAGCGGGAATAGCTGa                                                                                                                                           <  3:203865/149‑1 (MQ=255)

       cTGCCGCGGCGGGTCAGGATTAAATCGCCATTGATGATAACAAATTGATTTGTGTCTGTTTCGCCATATTATCGCGGTAATCAGCAACGCGGCTTGGCCAGTTAATTCCGGCTACCAGCGTCAGATTACGCAGTAGCGGGAATAGCTGa                                                                                                                                           <  7:45386/149‑1 (MQ=255)

            gcggcgGGTCAGGATTAAATCGCCATTGATGATAACAAATTGATTTGTGTCTGTTTCGCCATATTATCGCGGTAATCAGCAACGCGGCTTGGCCAGTTAATTCCGGCTACCAGCGTCAGATTACGCAGTAGCGg                                                                                                                                                     >  7:131260‑M2/1‑133 (MQ=255)

            gcggcgGGTCAGGATTAAATCGCCATTGATGATAACAAATTGATTTGTGTCTGTTTCGCCATATTATCGCGGTAATCAGCAACGCGGCTTGGCCAGTTAATTCCGGCTACCAGCGTCAGATTACGCAGTAGCGg                                                                                                                                                     <  8:131260‑M2/134‑2 (MQ=255)

            gcggcgGGTCAGGATTAAATCGCCATTGATGATAACAAATTGATTTGTGTCTGTTTCGCCATATTATCGCGGTAATCAGCAACGCGGCTTGGCCAGTTAATTCCGGCTACCAGCGTCAGATTACGCAGTAGCGGGAATAGCTGAatat                                                                                                                                       >  3:400663/1‑148 (MQ=255)

              ggcggGTCAGGATTAAATCGCCATTGATGATAACAAATTGATTTGTGTCTGTTTCGCCATATTATCGCGGTAATCAGCAACGCGGCTTGGCCAGTTAATTCCGGCTACCAGCGTCAGATTACGCAGTAGCGGGAATAGCTGAATatcat                                                                                                                                    >  2:263016/1‑149 (MQ=255)

                   gTCAGGATTAAATCGCCATTGATGATAACAAATTGATTTGTGTCTGTTTCGCCATATTATCGCGGTAATCAGCAACGCGGCTTTGCCAGTTAATTCCGGCTACCAGCGGCAGATTACGCAGTAGCGGGAATAGCTGAATATCATCTTcc                                                                                                                               <  5:341524/149‑1 (MQ=255)

                   gTCAGGATTAAATCGCCATTGATGATAACAAATTGATTTGTGTCTGTTTCGCCATATTATCGCGGTAATCAGCAACGCGGCTTGGCCAGTTAATTCCGGCTACCAGCGTCAGATTACGCAGTAGCGGGAATAGCTGAATATCATCTTcc                                                                                                                               >  8:4584/1‑149 (MQ=255)

                   gTCAGGATTAAATCGCCATTGATGATAACAAATTGATTTGTGTCTGTTTCGCCATATTATCGCGGTAATCAGCAACGCGGCTTGGCCAGTTAATTCCGGCTACCAGCGTCAGATTACGCAGTAGCGGGAATAGCTGAATATCATCTTcc                                                                                                                               >  8:11289/1‑149 (MQ=255)

                       ggATTAAATCGCCATTGATGATAACAAATTGATTTGTGTCTGTTTCGCCATATTATCGCGGTAATCAGCAACGCGGCTTGGCCAGTTAATTCCGGCTACCAGCGTCAGATTACGCAGTAGCGGGAATAGCTGAATATCATCTTCCGaaa                                                                                                                           <  4:203185/149‑1 (MQ=255)

                            aaaTCGCCATTGATGATAACAAATTGATTTGTGTCTGTTTCGCCATATTATCGCGGTAATCAGCAACGCGGCTTGGCCAGTTAATTCCGGCTACCAGCGTCAGATTACGCAGTAGCGGGAATAGCTGAATATCATCTTCCGAAAGTTc                                                                                                                       <  7:98283/148‑1 (MQ=255)

                              aTCGCCATTGATGATAACAAATTGATTTGTGTCTGTTTCGCCATATTATCGCGGTAATCAGCAACGCGGCTTGGCCAGTTAATTCCGGCTACCAGCGTCAGATTACGCAGTAGCGGGAATAGCTGAATATCATCTTCCGAAAGTTCGc                                                                                                                     >  6:97496/1‑148 (MQ=255)

                                 gCCATTGATGATAACAAATTGATTTGTGTCTGTTTCGCCATATTATCGCGGTAATCAGCAACGCGGCTTGGCCAGTTAATTCCGGCTACCAGCGTCAGATTACGCAGTAGCGggaa                                                                                                                                                  <  4:84127‑M2/116‑5 (MQ=255)

                                 gCCATTGATGATAACAAATTGATTTGTGTCTGTTTCGCCATATTATCGCGGTAATCAGCAACGCGGCTTGGCCAGTTAATTCCGGCTACCAGCGTCAGATTACGCAGTAGCGggaa                                                                                                                                                  >  3:84127‑M2/1‑112 (MQ=255)

                                   cATTGATGATAACAAATTGATTTGTGTCTGTTTCGCCATATTATCGCGGTAATCAGCAACGCGGCTTGGCCAGTTAATTCCGGCTACCAGCGTCAGATTACGCAGTAGCGGGAATAGCTGAATatcatc                                                                                                                                   >  1:96226/1‑129 (MQ=255)

                                   cATTGATGATAACAAATTGATTTGTGTCTGTTTCGCCATATTATCGCGGTAATCAGCAACGCGGCTTGGCCAGTTAATTCCGGCTACCAGCGTCAGATTACGCAGTAGCGGGAATAGCTGAATatcatc                                                                                                                                   <  2:96226/129‑1 (MQ=255)

                                    aTTGATGATAACAAATTGATTTGTGTCTGTTTCGCCATATTATCGCGGTAATCAGCAACGCGGCTTGGCCAGTTAATTCCGGCTACCAGCGTCAGATTACGCAGTAGCGGGAATAGCTGAATATCATCTTCCGAAAGTTCGCCATTCAc                                                                                                              >  4:42610/1‑149 (MQ=255)

                                          gatAACAAATTGATTTGTGTCTGTTTCGCCATATTATCGCGGTAATCAGCAACGCGGCTTGGCCAGTTAATTCCGGCTACCAGCGTCAGATTACGCAGTAGCGGGAATAGCTGAATATCATCTTCCGAAAGTTCGCCATTCACGGCGtt                                                                                                        >  1:216494/1‑149 (MQ=255)

                                               cAAATTGATTTGTGTCTGTTTCGCCATATTATCGCGGTAATCAGCAACGCGGCTTGGCCAGTTTATTCCGGCTACCAGCGTCAGATTACGCAGTAGCGGGAATAGCTGAATATCATCTTCCGAAAGTTCGCCATTCACGGCGTTCGGtt                                                                                                   <  7:443827/149‑1 (MQ=255)

                                               cAAATTGATTTGTGTCTGTTTCGCCATATTATCGCGGTAATCAGCAACGCGGCTTGGCCAGTTAATTCCGGCTACCAGCGGCAGATTACGCAGTAGCGGGAATAGCTGAATATCATCTTCCGAAAGTTCGCCATTCACGGCGTTCGGtt                                                                                                   <  1:104073/149‑1 (MQ=255)

                                                taaTTGATTTGTGTCTGTTTCTCCATATTATCGCGGTAATCAGCAACGCTGCTTGGCCTGTTAATTCCGGCTACCAGCGTCAGATTACGCAGTAGCGGGAATAGCTGAATATCATCTTCCGAAAGTTCGCCATTCACGGCGTTCGGttt                                                                                                  <  2:387186/148‑1 (MQ=255)

                                                  aTTGATTTGTGTCTGTTTCGCCATATTATCGCGGTAATCAGCAACGCGGCTTGGCCAGTTAATTCCGGCTACCAGCGTCAGATTACGCAGTAGCGGGAATAGCTGAATATCATCTTCCGAAAGTTCGCCATTCACGGCGTTCGGTTTGa                                                                                                >  6:148996/1‑149 (MQ=255)

                                                  aTTGATTTGTGTCTGTTTCGCCATATTATCGCGGTAATCAGCAACGCGGCTTGGCCAGTTAATTCCGGCTACCAGCGTCAGATTACGCAGTAGCGGGAATAGCTGAATATCATCTTCCGAAAGTTCGCCATTCACGGCGTTCGGTTTGa                                                                                                <  1:403452/149‑1 (MQ=255)

                                                  aTTGATTTGTGTCTGTTTCGCCATATTATCGCGGTAATCAGCAACGCGGCTTGGCCAGTTAATTCCGGCTACCAGCGTCAGATTACGCAGTAGCGGGAATAGCTGAATATCATCTTCCGAAAGTTCGCCATTCACGGCGTTCGGTTTGa                                                                                                >  7:383644/1‑149 (MQ=255)

                                                       tttGTGTCTGTTTCGCCATATTATCGCGGTAATCAGCAACGCGGCTTGGCCAGTTAATTCCGGCTACCAGCGTCAGATTACGCAGTAGCGGGAATAGCTGAATATCATCTTCCGAAAGTTCGCCATTCACGGCGTTCGGTTTGACGAt                                                                                            >  5:441714/1‑148 (MQ=255)

                                                          gtgtCTGTTTCGCCATATTATCGCGGTAATCAGCAACGCGGCTTGGCCAGTTAATTCCGGCTACCAGCGTCAGATTACGCAGTAGCGGGAATAGCTGAATATCATCTTCCGAAAGTTCGCCATTCACGGCGTTCGGTTTGACGATCAGt                                                                                        >  3:157375/1‑149 (MQ=255)

                                                           tgtCTGTTTCGCCATATTATCGCGGTAATCAGCAACGCGGCTTGGCCAGTTAATTCCGGCTACCAGCGTCAGATTACGCAGTAGCGGGAATAGCTGAATATCATCTTCCGAAAGTTCGCCATTCACGGCGTTCGGTTTGACGATCAGtt                                                                                       <  7:8498/149‑1 (MQ=255)

                                                             tctcTTTCGCCATATTATCGCGGTAATCAGCAACGCGGCTTGGCCAGTTAATTCCGGCTACCAGCGTCAGATTACGCAGTAGCGGGAATAGCTCAATATCATCTTCCGAAAGATCGCCAATCACGGCGTTCGGTTAGACGATCAGTTTg                                                                                     >  3:315655/1‑149 (MQ=255)

                                                             tCTGTTTCGCCATATTATCGCGGTAATCAGCAACGCGGCTTGGCCAGTTAATTCCGGCTACCAGCGTCAGATTACGCAGTAGCGGGAATAGCTGAATATCATCTTCCGAAAGTTCGCCATTCACGGCGTTCgg                                                                                                     >  2:194506/1‑133 (MQ=255)

                                                             tCTGTTTCGCCATATTATCGCGGTAATCAGCAACGCGGCTTGGCCAGTTAATTCCGGCTACCAGCGTCAGATTACGCAGTAGCGGGAATAGCTGAATATCATCTTCCGAAAGTTCGCCATTCACGGCGTTCgg                                                                                                     <  1:194506/133‑1 (MQ=255)

                                                             tCTGTTTCGCCATATTATCGCGGTAATCAGCAACGCGGCTTGGCCAGTTAATTCCGGCTACCAGCGTCAGATTACGCAGTAGCGGGAATAGCTGAATATCATCTTCCGAAAGTTCGCCATTCACGGCGTTCGGTTTGACGATCAGttt                                                                                      <  1:306404/148‑1 (MQ=255)

                                                             tCTGTTTCGCCATATTATCGCGGTAATCAGCAACGCGGCTTGGCCAGTTAATTCCGGCTACCAGCGTCAGATTACGCAGTAGCGGGAATAGCTGAATATCATCTTCCGAAAGTTCGCCATTCACGGCGTTCGGTTTGACGATCAGTTTg                                                                                     >  3:219580/1‑149 (MQ=255)

                                                               tGTTTCGCCATATTATCGCGGTAATCAGCAACGCGGCTTGGCCAGTTAATTCCGGCTACCAGCGTCAGATTACGCAGTAGCGGGAATAGCTGAATATCATCTTCCGAAAGTTCGCCATTCACGGCGTTCGGTTTGACGATCAGttt                                                                                      <  4:364074/146‑1 (MQ=255)

                                                               tGTTTCGCCATATTATCGCGGTAATCAGCAACGCGGCTTGGCCAGTTAATTCCGGCTACCAGCGTCAGATTACGCAGTAGCGGGAATAGCTGAATATCATCTTCCGAAAGTTCGCCATTCACGGCGTTCGGTTTGACGATCAGttt                                                                                      >  3:364074/1‑146 (MQ=255)

                                                                gTTTCGCCATATTATCGCGGTAATCAGCAACGCGGCTTGGCCAGTTAATTCCGGCTACCAGCGTCAGATTACGCAGTAGCGGGAATAGCTGAATATCATCTTCCGAAAGTTCGCCATTCACGGCGTTCGGTTTGACGATCAGTTTGTc                                                                                   >  7:296261/1‑148 (MQ=255)

                                                                 tttCGCCATATTATCGCGGTAATCAGCAACGCGGCTTGGCCAGTTAATTCCGGCTACCAGCGTCAGATTACGCAGTAGCGGGAATAGCTGAATATCATCTTCCGAAAGTTCGCCTTTCACGGCGTTCGGTTTGACGATCAGTTTGTc                                                                                   <  4:119790/147‑1 (MQ=255)

                                                                 tttCGCCATATTATCGCGGTAATCAGCAACGCGGCTTGGCCAGTTAATTCCGGCTACCAGCGTCAGATTACGCAGTAGCGGGAATAGCTGAATATCATCTTCCGAAAGTTCGCCATTCACGGCGTTCGGTTTGACGATCAGTTTGTc                                                                                   <  1:200260/147‑1 (MQ=255)

                                                                 tttCGCCATATTATCGCGGTAATCAGCAACGCGGCTTGGCCAGTTAATTCCGGCTACCAGCGTCAGATTACGCAGTAGCGGGAATAGCTGAATATCATCTTCCGAAAGTTCGCCATTCACGGCGTTCGGTTTGACGATCAGTTTGTc                                                                                   <  3:42610/147‑1 (MQ=255)

                                                                 tttCGCCATATTATCGCGGTAATCAGCAACGCGGCTTGGCCAGTTAATTCCGGCTACCAGCGTCAGATTACGCAGTAGCGGGAATAGCTGAATATCATCTTCCGAAAGTTCGCCATTCACGGCGTTCGGTTTGACGATCAGTTTGTCCa                                                                                 <  8:22691/149‑1 (MQ=255)

                                                                 tttCGCCATATTATCGCGGTAATCAGCAACGCGGCTTGGCCAGTTAATTCCGGCTACCAGCGTCAGA‑TACGCAGTAGCGGGAATAGCTGAATATCATCTTCCGAAAGTTCGCCATTCACGGCGTTCGGTTTGACGATCAGTTTGTCCa                                                                                 <  2:87654/148‑1 (MQ=255)

                                                                     gCCATATTATCGCGGTAATCAGCAACGCGGCTTGGCCAGTTAATTCCGGCTACCAGCGTCAGATTACGCAGTAGCGGGAATAGCTGAATatcatc                                                                                                                                   >  1:308115/1‑95 (MQ=255)

                                                                          attatCGCGGTAATCAGCAACGCGGCTTGGCCAGTTAATTCCGGCTACCAGCGTCAGATTACGCAGTAGCGGGAATAGCTGAATATCATCTTCCGAAAGTTCGCCATTCACGGCGTTCGGTTTGACGATCAGTTTGTCCAGCGCACGt                                                                         >  1:386144/1‑148 (MQ=255)

                                                                          attatCGCGGTAATCAGCAACGCGGCTTGGCCAGTTAATTCCGGCTACCAGCGTCAGATTACGCAGTAGCGGGAATAGCTGAATATCATCTTCCGAAAGTTCGCCATTCACGGCGTTCGGTTTGACGATCAGTTTGTCCAGCGCACGt                                                                         >  5:86346/1‑148 (MQ=255)

                                                                             atCGCGGTAATCAGCAACGCGGCTTGGCCAGTTAATTCCGGCTACCAGCGTCAGATTACGCAGTAGCGGGAATAGCTGAATATCATCTTCCGAAAGTTCGCCATTCACGGCGTTCGGTTTGACGATCAGTTTGTCCAGCGCACGTaaa                                                                      >  8:263050/1‑148 (MQ=255)

                                                                             atCGCGGTAATCAGCAACGCGGCTTGGCCAGTTAATTCCGGCTACCAGCGTCAGATTACGCAGTAGCGGGAATAGCTGAATATCATCTTCCGAAAGTTCGCCATTCACGGCGTTCGGTTTGACGATCAGTTTGTCCAGCGCACGTaaa                                                                      <  6:86346/148‑1 (MQ=255)

                                                                                 cgGTAATCAGCAACGCGGCTTGGCCAGTTAATTCCGGCTACCAGCGTCAGATTACGCAGTAGCGGGAATAGCTGAATATCATCTTCCGAAAGTTCGCCATTCACGGCGTTCGGTTTGACGATCAGTTTGTCCAGCGCACGTAAatcatc                                                                 <  5:97496/149‑1 (MQ=255)

                                                                                  ggTAAGAAGCCACGCGGCTTGGCCAGTTAATTCCGGCTACCAGCGTCAGATTACGCAGTAGCGGGTATAGCTGAATATCATCTTCCGAATGTTCGCCATTCACGGCGTTCGGTTTGACGATCAGTTTGTCCAGCGCACGTAAATCATCg                                                                <  4:315655/149‑1 (MQ=255)

                                                                                      aTCAGGATCGCGGCTAGGGCAGTTAATTCCGGCTACCAGCGTCAGATTACGCAGTAGAGGGAATAGCTGAATATCTTCTTCCGAAAGTTCGCCATTCACGGCGTTCGGTTTGACTATCAGTTTGTCGAGCGCACGTAAATCATCGCTGa                                                            <  2:212787/149‑1 (MQ=255)

                                                                                      aTCAGCAACGCGGCTTGGCCAGTTAATTCCGGCTACCAGCGTCAGATTACGCAGTAGCGGGAATAGCTGAATATCATCTTCCGAAAGTTCGCCATTCACGGCGTTCGGTTTGACGATCAGTTTGTCCAGCGCACGTAAATCATCGCTg                                                             <  2:216494/148‑1 (MQ=255)

                                                                                      aTCAGCAACGCGGCTTGGCCAGTTAATTCCGGCTACCAGCGTCAGATTACGCAGTAGCGGGAATAGCTGAATATCATCTTCCGAAAGTTCGCCATTCACGGCGTTCGGTTTGACGATCAGTTTGTCCAGCGCACGTAAATCATCGCTGa                                                            <  6:441714/149‑1 (MQ=255)

                                                                                        cAGCAACGCGGCTTGGCCAGTTAATTCCGGCTACCAGCGTCAGATTACGCAGTAGCGGGAATAGCTGAATATCATCTTCCGAAAGTTCGCCATTCACGGCGTTCGGTTTGACGATCAGTTTGTCCAGCGCACGTAAATCATCGCTGata                                                          >  7:423837/1‑149 (MQ=255)

                                                                                         aGCAACGCGGCTTGGCCAGTTAATTCCGGCTACCAGCGTCAGATTACGCAGTAGCGGGAATAGCTGAATATCATCTTCCGAAAGTTCGCCATTc                                                                                                                >  4:410796/1‑94 (MQ=255)

                                                                                         aGCAACGCGGCTTGGCCAGTTAATTCCGGCTACCAGCGTCAGATTACGCAGTAGCGGGAATAGCTGAATATCATCTTCCGAAAGTTCGCCATTCACGGCGTTCGGTTTGACGATCAGTTTGTCCAGCGCACGTAAatcat                                                                  <  1:171448/140‑1 (MQ=255)

                                                                                         aGCAACGCGGCTTGGCCAGTTAATTCCGGCTACCAGCGTCAGATTACGCAGTAGCGGGAATAGCTGAATATCATCTTCCGAAAGTTCGCCATTCACGGCGTTCGGTTTGACGATCAGTTTGTCCAGCGCACGTAAatcat                                                                  >  2:171448/1‑140 (MQ=255)

                                                                                         aGCAACGCGGCTTGGCCAGTTAATTCCGGCTACCAGCGTCAGATTACGCAGTAGCGGGAATAGCTGAATATCATCTTCCGAAAGTTCGCCATTCACGGCGTTCGGTTTGACGATCAGTTTGTCCAGCGCACGTAAATCATCGCTGata                                                          <  2:386144/148‑1 (MQ=255)

                                                                                          gCAACGCGGCTTGGCCAGTTAATTCCGGCTACCAGCGTCAGATTACGCAGTAGCGGGAATAGCTGAATATCATCTTCCGAAAGTTCGCCATTCACGGCGTTCGGTTTGACGATCAGTTTGTCCAGCGCACGTAAATCATCGCTGATAtt                                                        >  2:377931/1‑149 (MQ=255)

                                                                                          gCAACGCGGCTTGGCCAGTTAATTCCGGCTACCAGCGTCAGATTACGCAGTAGCGGGAATAGCTGAATATCATCTTCCGAAAGTTCGCCATTCACGGCGTTCGGTTTGACGATCAGTTTGTCCAGCGCACGTAAATCATCGCTGATAtt                                                        <  4:157375/149‑1 (MQ=255)

                                                                                          gCAACGCGGCTTGGCCAGTTAATTCCGGCTACCAGCGTCAGATTACGCAGTAGCGGGAATAGCTGAATATCATCTTCCGAAAGTTCGCCATTCACGGCGTTCGGTTTGACGATCAGTTTGTCCAGCGCACGTAAATCATCGCTGATAtt                                                        >  1:216038/1‑149 (MQ=255)

                                                                                          gCAACGCGGCTTGGCCAGTTAATCCCGGCTACCAGCGTCAGATTACGCAGTAGCGGGAATAGCTGAATATCATCTTCCGAAAGTTCGCCATTCACGGCGTTCGGTTTGACGATCAGTTTGTCCAGCGCACGTAAATCATCGCTGATAtt                                                        >  6:401450/1‑149 (MQ=255)

                                                                                            aaCGCGGCTTGGCCAGTTAATTCCGGCTACCAGCGTCAGATTACGCAGTAGCGGGAATAGCTGAATATCATCTTCCGAAAGTTCGCCATTCACGGCGTTCGGTTTGACGATCAGTTTGTCCAGCGCACGTAAATCATCGCTGATATTCt                                                      >  1:80978/1‑149 (MQ=255)

                                                                                             aCGCGGCTTGGCCAGTTAATTCCGGCTACCAGCGTCAGATTACGCAGTAGCGGGAATAGCTGAATATCATCTTCCGAAAGTTCGCCATTCACGGCGTTCGGTTTGACGATCAGTTTGTCCAGCGCACGTaaa                                                                      <  5:386152/132‑1 (MQ=255)

                                                                                             aCGCGGCTTGGCCAGTTAATTCCGGCTACCAGCGTCAGATTACGCAGTAGCGGGAATAGCTGAATATCATCTTCCGAAAGTTCGCCATTCACGGCGTTCGGTTTGACGATCAGTTTGTCCAGCGCACGTaaa                                                                      >  6:386152/1‑132 (MQ=255)

                                                                                               gcgGCTTGGCCAGTTAATTCCGGCTACCAGCGTCAGATTACGCAGTAGCGGGAATAGCTGAATATCATCTTCCTAAAGTTCGCCATTCACGGCGTTCGGTTTGACGATCAGTTTGTCCAGCGCACGTAAATCATCGCTGATATTCTTaa                                                   >  5:174934/1‑149 (MQ=255)

                                                                                                cgGCTTGGCCAGTTAATTCCGGCTACCAGCGTCAGATTACGCAGTAGCGGGAATAGCTGAATATCATCTTCCGAAAGTTCGCCATTCACGGCGTTCGGTTTGACGATCAGTTTGTCCAGCGCACGTAAATCATCGCTGATATTCTTAAt                                                  <  4:400663/149‑1 (MQ=255)

                                                                                                    ttGGCCAGTTAATTCCGGCTACCAGCGGCAGATTACGCAGTAGCGGGAATAGCTGAATATCATCTTCCGAAAGTTCGCCATTCACGGCGTTCGGTTTGACGATCAGTTTGTCCAGCGCACGTaa                                                                       <  4:72043/124‑1 (MQ=255)

                                                                                                      ggCCAGTTAATTCCGGCTACCAGCGTCAGATTACGCAGTAGCGGGAATAGCTGAATATCATCTTCCGAAAGTTCGCCATTCACGGCGTTCGGTTTGACGATCAGTTTGTCCAGCGCACGTAAATCATCGCTGATATTCTTAATCAGAc                                             <  8:423837/148‑1 (MQ=255)

                                                                                                      ggCCAGTTAATTCCGGCTACCAGCGTCAGATTACGCAGTAGCGGGAATAGCTGAATATCATCTTCCGAAAGTTCGCCATTCACGGCGTTC‑GTTTGACGATCAGTTTGTCCAGAGCACGTAAATCATCGCTGATATTCTTAATCAGAcc                                            <  6:179602/148‑1 (MQ=255)

                                                                                                         cAGTTAATTCCGGCTACCAGCGTCAGATTACGCAGTAGCGggaattaactggccaagccgcgttgctgattaccgcgataatatggcgaaacagacacaaaacaatttgttatcatcaatggcgatttaatcctgacccgccgcgg                                            >  1:216638‑M2/1‑40 (MQ=255)

                                                                                                         cAGTTAATTCCGGCTACCAGCGTCAGATTACGCAGTAGCGggaattaactggccaagccgcgttgctgattaccgcgataatatggcgaaacagacacaaaacaatttgttatcatcaatggcgatttaatcctgacccgccgcgg                                            <  2:216638‑M2/146‑107 (MQ=255)

                                                                                                         cAGTTAATTCCGGCTACCAGCGTCAGATTACGCAGTAGCGggaattaactggccaagccgcgttgctcattaccgcgataatatggcgaaacagccacaaatcaatttgttatcatcaatggccagataatcctgacccgccgcggccg                                         <  6:243399‑M2/149‑110 (MQ=255)

                                                                                                          aGTTAATTCCGGCTACCAGCGTCAGATTACGCAGTAGCGggaattaactggccaagccgcgttgctgattaccgcgataatatggcgaaacagacacaaatcaatttgttatcatcaatggcgatttaatcctgacccgccgcggcagc                                        <  7:289976‑M2/149‑111 (MQ=255)

                                                                                                          aGTTAATTCCGGCTACCAGCGTCAGATTACGCAGTAGCGGGAATAGCTGAATATCATCTTCCGAAAGTTCGCCATTCACGGCGTTCGGTTTGACGATCAGTTTGTCCAGCGCACGTAAATCATCGCTGATATTCTTAATCAGACCGTCa                                        <  8:296261/149‑1 (MQ=255)

                                                                                                          aGTTAATTCCGGCTACCAGCGTCAGATTACGCAGTAGCGGGAATAGCTGAATATCATCTTCCGAAAGTTCGCCATTCACGGCGTTCGGTTTGACGATCAGTTTGTCCAGCGCACGTAAATCATCGCTGATATTCTTAATCAGACCGTCa                                        <  8:383644/149‑1 (MQ=255)

                                                                                                           gTTAATTCCGGCTACCAGCGTCAGATTACGCAGTAGCGGGAATAGCTGAATATCATCTTCCGAAAGTTCGCCATTCACGGCGTTCGGTTTGACGATCAGTTTGTCCAGCGCACGTAAATCATCGCTGATATTCTTAATCAGACCGt                                          >  3:371618/1‑146 (MQ=255)

                                                                                                              aaTTCCGGCTACCAGCGTCAGATTACGCAGTAGCGGGAATAGCTGAATATCATCTTCCGAAAGTTCGCCATTCACGGCGTTCGGTTTGACGATCAGTTTGTCCAGCGCACGTAAATCATCGCTGATATTCTTAATCAGACCGt                                          >  6:417064/1‑143 (MQ=255)

                                                                                                              aaTTCCGGCTACCAGCGTCAGATTACGCAGTAGCGGGAATAGCTGAATATCATCTTCCGAAAGTTCGCCATTCACGGCGTTCGGTTTGACGATCAGTTTGTCCAGCGCACGTAAATCATCGCTGATATTCTTAATCAGACCGt                                          <  5:417064/143‑1 (MQ=255)

                                                                                                               aTTCCGGCTACCAGCGTCAGATTACGCAGTAGCGGGAATAGCTGAATATCATCTTCCGAAAGTTCGCCATTCACGGCGTTCGGTTTGACGATCAGTTTGTCCAGCGCACGTAAATCATCGCTGATATTCTTAATCAGACCGTCAGAGTg                                   >  3:97380/1‑149 (MQ=255)

                                                                                                                   cGGCTACCAGCGTCAGATTACGCAGTAGCGGGAATAGCTGAATATCATCTTCCGAAAGTTCGCCATTCACGGCGTTCGGTTTGACGATCAGTTTGTCCAGCGCACGTAAATCATCGCTGATATTCTTAATCAGACCGTCaga                                      >  1:367371/1‑142 (MQ=255)

                                                                                                                   cGGCTACCAGCGTCAGATTACGCAGTAGCGGGAATAGCTGAATATCATCTTCCGAAAGTTCGCCATTCACGGCGTTCGGTTTGACGATCAGTTTGTCCAGCGCACGTAAATCATCGCTGATATTCTTAATCAGACCGTCaga                                      <  2:367371/142‑1 (MQ=255)

                                                                                                                   cGGCTACCAGCGTCAGATTACGCAGTAGCGGGAATAGCTGAATATCATCTTCCGAAAGTTCGCCATTCACGGCGTTCGGTTTGACGATCAGTTTGTCCAGCGCACGTAAATCATCGCTGATATTCTTAATCAGACCGTCAGAGTGGGc                                >  7:348765/1‑148 (MQ=255)

                                                                                                                    ggCTACCAGCGTCAGATTACGCAGTAGCGGGAATAGCTGAATATCATCTTCCGAAAGTTCGCCATTCACGGCGTTCGGTTTGACGATCAGTTTGTCCAGCGCACGTAAATCATCGCTGATATTCTTAATCAGACCGTCAGAGTGGGCca                              <  5:148996/149‑1 (MQ=255)

                                                                                                                              gTCAGATTACGCAGTAGCGGGAATAGCTGAATATCATCTTCCGAAAGTTCGCCATTCACGGCGTTCGGTTTGACGATCAGTTTGTCCAGCGCACGTAAATCATCGCTGATATTCTTAATCAGACCGTCAGAGTGGGCCAGCAGGTCgg                     >  1:226699/1‑148 (MQ=255)

                                                                                                                              gTCAGATTACGCAGTAGCGGGAATAGCTGAATATCATCTTCCGAAAGTTCGCCATTCACGGCGTTCGGTTTGACGATCAGTTTGTCCAGCGCACGTAAATCATCGCTGATATTCTTAATCAGACCGTCAGAGTGGGCCAGCAGGTCGGc                    <  4:219580/149‑1 (MQ=255)

                                                                                                                                cAGATTACGCAGTAGCGGGAATAGCTGAATATCATCTTCCGATAGTTCGCCATTCACGGCGTTCGGTTTGACGATCAGTTTGTCCAGCGCACGTAAATCATCGCTGATATTCTTAATCAGACCGTCAGAGTGGGc                                >  2:4066/1‑135 (MQ=255)

                                                                                                                                cAGATTACGCAGTAGCGGGAATAGCTGAATATCATCTTCCGATAGTTCGCCATTCACGGCGTTCGGTTTGACGATCAGTTTGTCCAGCGCACGTAAATCATCGCTGATATTCTTAATCAGACCGTCAGAGTGGGc                                <  1:4066/135‑1 (MQ=255)

                                                                                                                                 aGATTACGCAGTAGCGGGAATAGCTGAATATCATCTTCCGAAAGTTCGCCATTCACGGCGTTCGGTTTGACGCTCAGTTTGTCCAGCGCACGTAAATCATCGCTGATATTCTTAATCAGACCGTCAGAGTGGGCCAGCAGGTCGGCaa                  >  3:88305/1‑148 (MQ=255)

                                                                                                                                  gATTACGCAGTAGCGGGAATAGCTGAATATCATCTTCCGAAAGTTCGCCATTCACGGCGTTCGGTTTGACGATCAGTTTGTCCAGCGCACGTAAATCATCGCTGATATTCTTAATCAGACCGTCAGAGTGGGCcagcag                          <  6:443362/139‑1 (MQ=255)

                                                                                                                                       cGCAGTAGCGggaattaactggccaagccgcgttgctgattaccgcgataatatggcgaaacagacacaaatcaatttgttatgatcaatggcgatttaatcctgacccgccgcggcagcctgtattcgcgggttgccgccgttttca            >  5:243399‑M2/1‑10 (MQ=255)

                                                                                                                                       cGCAGTAGCGggaattaactggccaagccgcgttgctgattaccgcgataatatggcgaaacagacacaaatcaatttgttatcatcaatggcgatttaatcctgacccgccgcggcagcctgtattcgcgggttgccgccgttttca            >  8:289976‑M2/1‑10 (MQ=255)

                                                                                                                                       cGCAGTAGCGGGAATAGCTGAATATCATCTTCCGAAAGTTCGCCATTCACGGCGTTCGGTTTGACGATCAGTTTGTCCAGCGCACGTAAATCATCGCTGATATTCTTAATCAGACCGTCAGAGTGGGCCAGCAGGTCGGCAAAATTAcc           >  8:224132/1‑149 (MQ=255)

                                                                                                                                       cGCAGTAGCGGGAATAGCTGAATATCATCTTCCGAAAGTTCGCCATTCACGGCGTTCGGTTTGACGATCAGTTTGTCCAGCGCACGTAAATCATCGCTGATATTCTTAATCAGACCGTCAGAGTGGGCCAGCAGGTCGGCAAAATTAcc           >  8:217743/1‑149 (MQ=255)

                                                                                                                                        gCAGTAGCGGGAATAGCTGAATATCATCTTCCGAAAGTTCGCCATTCACGGCGTTCGGTTTGACGATCAGTTTGTCCAGCGCACGTAAATCATCGCTGATATTc                                                       <  5:434040/104‑1 (MQ=255)

                                                                                                                                        gCAGTAGCGGGAATAGCTGAATATCATCTTCCGAAAGTTCGCCATTCACGGCGTTCGGTTTGACGATCAGTTTGTCCAGCGCACGTAAATCATCGCTGATATTCTTAATCAGACCGTCAGAGTGGGCCAGCAGGTCGGCAAAATTAccc          >  2:196282/1‑149 (MQ=255)

                                                                                                                                         cAGTAGCGGGAATAGCTGAATATCATCTTCCGAAAGTTCGCCATTCACGGCGTTCGGTTTGACGATCAGTTTGTCCAGCGCACGTAAATCATCGCTGATATTCTTAATCAGACCGTCAGAGTGGGCCAGCAGGTCGGCAAAATTACCcg         <  7:252444/149‑1 (MQ=255)

                                                                                                                                          aGTAGCGGGAATAGCTGAATATCATCTTCCGAAAGTTCGCCATTCACGGCGTTCGGTTTGACGATCAGTTTGTCCAGCGCACGTAAATCATCGCTGATATTCTTAATCAGACCGTCAGAGTGGGCCAGCAGGTCGGCAAAATTACCcgc        >  1:51263/1‑149 (MQ=255)

                                                                                                                                          aGTAGCGGGAATAGCTGAATATCATCTTCCGAAAGTTCGCCATTCACGGCGTTCGGTTTGACGATCAGTTTGTCCAGCGCACGTAAATCATCGCTGATATTCTTAATCAGACCGTCAGAGTGGGCCAGCAGGTCGGCAAAACTACCcgc        <  3:223020/149‑1 (MQ=255)

                                                                                                                                              gCGGGAATAGCTGAATATCATCTTCCGAAAGTTCGCCATTCACGGCGTTCGGTTTGACGATCAGTTTGTCCAGCGCACGTAAATCATCGCTGATATTCTTAATCAGACCGTCAGAGTGGGCCAGCAGGTCGGCAAAATTACCCGCGCTg    >  8:137392/1‑149 (MQ=255)

                                                                                                                                              gCGGGAATAGCTGAATATCATCTTCCGAAAGTTCGCCATTCACGGCGTTCGGTTTGACGATCAGTTTGTCCAGCGCACGTAAATCATCGCTGATATTCTTAATCAGACCGTCAGAGTGGGCCAGCAGGTCGGCAAAATTACCCGCGCTg    <  7:137392/149‑1 (MQ=255)

                                                                                                                                                gggAATAGCTGAATATCATCTTCCGAAAGTTCGCCATTCACGGCGTTCGGTTTGACGATCAGTTTGTCCAGCGCACGTAAATCATCGCTGATATTCTTAATCAGACCGTCAGAGTGGGCCAGCAGGTCGGCAAAATTACCCGCGCTGGc  >  6:440785/1‑149 (MQ=255)

ATACAGGCTGCCGCGGCGGGTCAGGATTAAATCGCCATTGATGATAACAAATTGATTTGTGTCTGTTTCGCCATATTATCGCGGTAATCAGCAACGCGGCTTGGCCAGTTAATTCCGGCTACCAGCGTCAGATTACGCAGTAGCGGGAATAGCTGAATATCATCTTCCGAAAGTTCGCCATTCACGGCGTTCGGTTTGACGATCAGTTTGTCCAGCGCACGTAAATCATCGCTGATATTCTTAATCAGACCGTCAGAGTGGGCCAGCAGGTCGGCAAAATTACCCGCGCTGGC  >  NC_000913/1123381‑1123673

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.