| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,228,183 | C→T | 5.1% | S35S (AGC→AGT) | ycgM → | putative isomerase/hydrolase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,228,183 | 0 | C | T | 5.1% | 315.1 / 4.4 | 99 | S35S (AGC→AGT) | ycgM | putative isomerase/hydrolase |
| Reads supporting (aligned to +/- strand): ref base C (45/48); new base T (3/2); total (49/50) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.74e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.73e-01 | |||||||||||
GTCGGCGCGGGTTTTCATATCCACGATAAGGTGAGGGGAACGTTATGTATCAACATCACAACTGGCAAGGTGCGCTGCTGGATTATCCGGTGAGTAAAGTAGTCTGTGTTGGCAGTAACTATGCCAAACATATTAAAGAGATGGGCAGCGCAGTGCCCGAAGAGCCAGTGCTGTTTATTAAACCAGAAACGGCACTGTGCGATCTGCGGCAGCCATTGGCGATCCCATCCGATTTCGGTTCAGTTCATCATGAAGTCGAACTGGCGGTGTTGATTGGCGCGACACTGCGTCAGG > NC_000913/1228035‑1228328 | gTCGGCGCGGGTTTTCATATCCACGATAAGGTGAGGGGAACGTTATGTATCAACATCACAACTGGCAAGGTGCGCTGCTGGATTATCCGGTGAGTAAAGTAGTCTGTGTTGGCAGTAACTATGCCAAACATATTAAAGAGATGGGCAgc > 6:403081/1‑149 (MQ=255) cgcgGGTTTTCATATCCACGATAAGGTGAGGGGAACGTTATGTATCAACATCACAACTGGCAAGGTGCGCTGCTGGATTATCCGGTGAGTAAAGTAGTCTGTGTTGGCAGTAACTATGCCAAACATATTAAAGAGATGGGCAGCGCAGt < 7:67315/149‑1 (MQ=255) cgcgGGTTTTCATATCCACGATAAGGTGAGGGGAACGTTATGTATCAACATCACAACTGGCAAGGTGCGCTGCTGGATTATCCGGTGAGTAAAGTAGTCTGTGTTGGCAGTAACTATGCCAAACATATTAAAGAGATGGGCAGCGCAGt < 3:132450/149‑1 (MQ=255) gggTTTTCATATCCACGATAAGGTGAGGGGAACGTTATGTATCAACATCACAACTGGCAAGGTGCGCTGCTGGATTATCCGGTGAGTAAAGTAGTCTGTGTTGGCAGTAACTATGCCAAACATATTAAAGAGATGGGCAGCGCAGTGcc < 6:62057/149‑1 (MQ=255) atatCCACGATAAGGTGAGGGGAACGTTATGTATCAACATCACAACTGGCAAGGTGCGCTGCTGGATTATCCGGTGAGTAAAGTAGTCTGTGTTGGCAGTAACTATGCCAAACATATTAAAGAGATGGGCAGCGCAGTGCCCGAAGAGc > 7:199306/1‑149 (MQ=255) tatCCACGATAAGGTGAGGGGAACGTTATGTATCAACATCACAACTGGCAAGGTGCGCTGCTGGATTATCCGGTGAGTAAAGTAGTCTGTGTTGGCAGTAACTATGCCAAACATATTAAAGAGATGGGCAGCGCAGTGCCCGAAGAGc > 6:161111/1‑148 (MQ=255) tatCCACGATAAGGTGAGGGGAACGTTATGTATCAACATCACAACTGGCAAGGTGCGCTGCTGGATTATCCGGTGAGTAAAGTAGTCTGTGTTGGCAGTAACTATGACAAACATATTAAAGAGATGGGCAGCGCAGTGCCCGAAGAGc > 6:456595/1‑148 (MQ=255) atCCACGATAAGGTGAGGGGAACGTTATGTATCAACATCACAACTGGCAAGGTGCGCTGCTGGATTATCCGGTGAGTAAAGTAGTCTGTGTTGGCAGTAACTATGCCAAACATATTAAAGAGATGGGCAGCGCAGTGCCCGAAGAGc > 8:125290/1‑147 (MQ=255) tCCACGATAAGGTGAGGGGAACGTTATGTATCAACATCACAACTGGCAAGGTGCGCTGCTGGATTATCCGGTGAGTAAAGTAGTCTGTGTTGGCAGTAACTATGCCAAACATATTAAAGAGATGGGCAGAGCAGTGCCCGAAGAGCCAg > 3:52690/1‑149 (MQ=255) ccACGATAAGGTGAGGGGAACGTTATGTATCAACATCACAACTGGCAAGGTGCGCTGCTGGATTATCCGGTGAGTAAAGTAGTCTGTGTTGGCAGTAACTATGCCAAACATATTAAAGAGATGGGCAGCGCAGTGCCCGAAGAGCCAGt > 1:109643/1‑149 (MQ=255) aCGATAAGGTGAGGGGAACGTTATGTATCAACATCACAACTGGCAAGGTGCGCTGCTGGATTATCCGGTGAGTAAAGTAGTCTGTGTTGGCAGTAACTATGCCAAACATATTAAAGAGATGGGCAGCGCAGTGCCCGAAGAGCCAGTGc > 3:126829/1‑149 (MQ=255) gATAAGGTGAGGGGAACGTTATGTATCAACATCACAACTGGCAAGGTGCGCTGCTGGATTATCCGGTGAGTAAAGTAGTCTGTGTTGGCAGTAACTATGCCAAACATATTAAAGAGATGGGCAGCGCAGTGCCCGAAGAGCCAGTGCTg > 2:268819/1‑149 (MQ=255) aTAAGGTGAGGGGAACGTTATGTATCAACATCACAACTGGCAAGGTGCGCTGCTGGATTATCCGGTGAGTAAAGTAGTCTGTGTTGGCAGTAACTATGCCAAACATATTAAAGAGATGGGCAGCGCAGTGCCCGAAGAGCCAGTGCTGt < 5:110013/149‑1 (MQ=255) aGGTGAGGGGAACGTTATGTATCAACATCACAACTGGCAAGGTGCGCTGCTGGATTATCCGGTGAGTAAAGTAGTCTGTGTTGGCAGTAACTATGCCAAACATATTAAAGAGATGGGCAGCGCAGTGCCCGAAGAGCCAGTGCTGTtta < 5:161111/149‑1 (MQ=255) gTGAGGGGAACGTTATGTATCAACATCACAACTGGCAAGGTGCGCTGCTGGATTATCCGGTGAGTAAAGTAGTCTGTGTTGGCAGTAACTATGCCAAACATATTAAAGAGATGGGCAGCGCAGTGCCCGAAGAGCCAGTGCTGTttat > 5:377376/1‑148 (MQ=255) tGAGGGGAACGTTATGTATCAACATCACAACTGGCAAGGTGCGCTGCTGGATTATCCGGTGAGTAAAGTAGTCTGTGTTGGCAGTAACTATGCCAAACATATTAAAGAGATGGGCAGCGCAGTGCCCGAAGAGc > 6:370026/1‑134 (MQ=255) tGAGGGGAACGTTATGTATCAACATCACAACTGGCAAGGTGCGCTGCTGGATTATCCGGTGAGTAAAGTAGTCTGTGTTGGCAGTAACTATGCCAAACATATTAAAGAGATGGGCAGCGCAGTGCCCGAAGAGc < 5:370026/134‑1 (MQ=255) aGGGGAACGTTATGTATCAACATCACAACTGGCAAGGTGCGCTGCTGGATTATCCGGTGAGTAAAGTAGTCTGTGTTGGCAGTAACTATGCCAAACATATTAAAGAGATGGGCAGCGCAGTGCCCGAAGAGCCAGTGCTGTTTATTaaa < 8:199306/149‑1 (MQ=255) aGGGGAACGTTATGTATCAACATCACAACTGGCAAGGTGCGCTGCTGGATTATCCGGTGAGTAAAGTAGTCTGTGTTGGCAGTAACTATGCCAAACATATTAAAGAGATGGGCAGCGCAGTGCCCGAAGAGCCAGTGCTGTTTATTaaa > 2:100924/1‑149 (MQ=255) gAACGGTATGTATCAACATCACAACTGGCAAGGTGCGCTGCTGGATTATCCGGTGAGTAAAGTAGTCTGTGTTGGCAGTAACTATGCCAAACATATTAAAGAGATGGGCAGCGCAGTGCCCGAAGAGCCAGTGCTGTTTATTAAACCAg < 8:223206/149‑1 (MQ=255) ttATGTATCAACATCACAACTGGCAAGGTGCGCTGCTGGATTATCCGGTGAGTAAAGTAGTCTGTGTTGGCAGTAACTATGCCAAACATATTAAAGAGATGGGCAGCGCAGTGCCCGaa > 1:466015/1‑119 (MQ=255) ttATGTATCAACATCACAACTGGCAAGGTGCGCTGCTGGATTATCCGGTGAGTAAAGTAGTCTGTGTTGGCAGTAACTATGCCAAACATATTAAAGAGATGGGCAGCGCAGTGCCCGaa < 2:466015/119‑1 (MQ=255) tGTATCAACATCACAACTGGCAAGGTGCGCTGCTGGATTATCCGGTGAGTAAAGTAGTCTGTGTTGGCAGTAACTATGCCAAACATATTAAAGAGATGGGCAGCGCAGTGCCCGAAGAGCCAGTGCTGTTTATTAAACCAGAAACGGCa > 3:47364/1‑149 (MQ=255) aTCAACATCACAACTGGCAAGGTGCGCTGCTGGATTATCCGGTGAGTAAAGTAGTCTGTGTTGGCAGTAACTATGCCAAACATATTAAAGAGATGGGCAGCGCAGTGCCCGAAGAGCCAGTGCTGTTTATTAAACCAGAAACGGCACtg > 6:388914/1‑149 (MQ=255) aaCATCACAAATGGCAAGGTGCGCTGCTGGATTATCCGGTGAGTAAAGTAGTCTGTGTTGGCAGTAACTATGCCAAACATATTAAAGAGATGGGCAGCGCATTGCCCGAATATCCAGTGCTGTTGATTAAACCAGAAACGGCAATGTGc > 8:56421/1‑149 (MQ=255) tCACAACTGGCAAGGTGCGCTGCTGGATTATCCGGTGAGTAAAGTAGTCTGTGTTGGCAGTAACTATGCCAAACATATTAAAGAGATGGGCAGCGCAGTGCCCGAAGAGCCAGTGCTGTTTATTAAACCAGAAACGGCACTGTGCGATc < 7:125290/149‑1 (MQ=255) acaACTGGCAAGGTGCGCTGCTGGATTATCCGGTGAGTAAAGTAGTCTGTGTTGGCAGTAACTATGCCAAACATATTAAAGAGATGGGCAGCGCAGTGCCCGAAGAGCCAGTGCTGTTTATTAAACCAGAAACGGCACTGTGCGATCTg > 6:129594/1‑149 (MQ=255) caACTGGCAAGGTGCGCTGCTGGATTATCCGGTGAGTAAAGTAGTCTGTGTTGGCAGTAACTATGCCAAACATATTAAAGAGATGGGCAGCGCAGTGCCCGAAGAGCCAGTGCTGTTTATTAAACCAGAAACGGCACTGTGCGATCTGc < 5:388914/149‑1 (MQ=255) aaCTGGCAAGGTGCGCTGCTGGATTATCCGGTGAGTAAAGTAGTCTGTGTTGGCAGTAACTATGCCAAACATATTAAAGAGATGGGCAGCGCAGTGCCCGAAGAGCCAGTGCTGt > 8:418594/1‑115 (MQ=255) aaCTGGCAAGGTGCGCTGCTGGATTATCCGGTGAGTAAAGTAGTCTGTGTTGGCAGTAACTATGCCAAACATATTAAAGAGATGGGCAGCGCAGTGCCCGAAGAGCCAGTGCTGt < 7:418594/115‑1 (MQ=255) aaCTGGCAAGGTGCGCTGCTGGATTATCCGGTGAGTAAAGTAGTCTGTGTTGGCAGTAACTATGCCAAACATATTAAAGAGATGGGCAGCGCAGTGCCCGAAGAGCCAGTGCTGTTTATTAAACCAGAAACGGCACTGTGCGATCTGCg > 7:403104/1‑149 (MQ=255) aaCTGGCAAGGTGCGCTGCTGGATTATCCGGTGAGTAAAGTAGTCTGTGTTGGCAGTAACTATGCCAAACATATTAAAGAGATGGGCAGCGCAGTGCCCGAAGAGCCAGTGCTGTTTATTAAACCAGAAACGGCACTGTGCGATCTGCg > 1:370804/1‑149 (MQ=255) cTGGCAAGGTGCGCTGCTGGATTATCCGGTGAGTAAAGTAGTCTGTGTTGGCAGTAACTATGCCAAACATATTAAAGAGATGGGCAGCGCAGTGCCCGAAGAGCCAGTGCTGTTTATTAAACCAGAAACg < 8:124650/130‑1 (MQ=255) cTGGCAAGGTGCGCTGCTGGATTATCCGGTGAGTAAAGTAGTCTGTGTTGGCAGTAACTATGCCAAACATATTAAAGAGATGGGCAGCGCAGTGCCCGAAGAGCCAGTGCTGTTTATTAAACCAGAAACg > 7:124650/1‑130 (MQ=255) gCAAGGTGCGCTGCTGGATTATCCGGTGAGTAAAGTAGTCTGTGTTGGCAGTAACTATGCCAAACATATTAAAGAGATGGGCAGCGCAGTGCCCGAAGAGCCAGTGCTGTTTATTAAACCAGAAACGGCACTGTGCGATCTGCGGCa < 2:109643/147‑1 (MQ=255) aGGTGCGCTGCTGGATTATCCGGTGAGTAAAGTAGTCTGTGTTGGCAGTAACTATGCCAAACATATTAAAGAGATGGGCAGCGCAGTGCCCGAAGAGCCAGTGCTGTTTATTAAACCAGAAACGGCACTGTGCGATCTGCGGCAGCCAt < 5:129594/149‑1 (MQ=255) gTGCGCTGCTGGATTATCCGGTGAGTAAAGTAGTCTGTGTTGGCAGTAACTATGCCAAACATATTAAAGAGATGGGCAGCGCAGTGCCCGAAGAGCCAGTGCTGTTTATTAAACCAGAAACGGCACTGTGCGATCTGCGGCAGCCATTg < 4:126829/149‑1 (MQ=255) tGCGCTGCTGGATTATCCGGTGAGTAAAGTAGTCTGTGTTGGCAGTAACTATGCCAAACATATTAAAGAGATGGGCAGCGCAGTGCCCGAAGAGCCAGTGCTGTTTATTAAACCAGAAACGGCACTGTGCGATCTGCGGCAGCCATTgg > 6:273404/1‑149 (MQ=255) tgctgGATTATCCGGTGAGTAAAGTAGTCTGTGTTGGCAGTAACTATGCCAAACATATTAAAGAGATGGGCAGCGCAGTGCCCGAAGAGCCAGTGCTGTTTATTAAACCAGAAACGGCACTGTGCGATCTGCGGCAGCCATTGGCGATc > 7:246848/1‑149 (MQ=255) ctgGATTATCCGGTGAGTAAAGTAGTCTGTGTTGGCAGTAACTATGCCAAACATATTAAAGAGATGGGCAGCGCAGTGCCCGAAGAGCCAGTGCTGTTTATTAAACCAGAAACGGCACTGTGCGATCTGCGGCAGCCATTGGCGATcc < 2:175852/148‑1 (MQ=255) ctgGATTATCCGGTGAGTAAAGTAGTCTGTGTTGGCAGTAACTATGCCAAACATATTAAAGAGATGGGCAGCGCAGTGCCCGAAGAGCCAGTGCTGTTTATTAAACCAGAAACGGCACTGTGCGATCTGCGGCAGCCATTGGCGATcc > 7:119166/1‑148 (MQ=255) ctgGATTATCCGGTGAGTAAAGTAGTCTGTGTTGGCAGTAACTATGCCAAACATATTAAAGAGATGGGCAGCGCAGTGCCCGAAGAGCCAGTGCTGTTTATTAAACCAGAAACGGCACTGTGCGATCTGCGGCAGCCATTGGCGATcc > 1:175852/1‑148 (MQ=255) ctgGATTATCCGGTGAGTAAAGTAGTCTGTGTTGGCAGTAACTATGCCAAACATATTAAAGAGATGGGCAGCGCAGTGCCCGAAGAGCCAGTGCTGTTTATTAAACCAGAAACGGCACTGTGCGATCTGCGGCAGCCATTGGCGATc < 1:100924/147‑1 (MQ=255) tgGATTATCCGGTGAGTAAAGTAGTCTGTGTTGGCAGTAACTATGCCAAACATATTAAAGAGATGGGCAGCGCAGTGCCCGAAGAGc < 2:93375/87‑1 (MQ=255) tgGATTATCCGGTGAGTAAAGTAGTCTGTGTTGGCAGTAACTATGCCAAACATATTAAAGAGATGGGCAGCGCAGTGCCCGAAGAGc > 1:93375/1‑87 (MQ=255) ggATTATCCGGTGAGTAAAGTAGTCTGTGTTGGCAGTAACTATGCCAAACATATTAAAGAGATGGGCAGCGCAGTGCCCGAAGAGCCAGTGCTGTTTATTAAACCAGAAACGGCACTGTGCGATCTGCGGCAGCCATTGGCGATCCCAt > 6:379866/1‑149 (MQ=255) gATTATCCGGTGAGTAAAGTAGTCTGTGTTGGCAGTAACTATGCCAAACATATTAAAGAGATGGGCAGCGCAGTGCCCGAAGAGCCAGTGCTGTTTATTAAACCAGAAACGGCACTGTGCGATCTGCGGCAGCCATTGGCGATCCCATc > 8:50183/1‑149 (MQ=255) gATTATCCGGTGAGTAAAGTAGTCTGTGTTGGCAGTAACTATGCCAAACATATTAAAGAGATGGGCAGCGCAGTGCCCGAAGAGCCAGTGCTGTTTATTAAACCAGAAACGGCACTGTGCGATCTGCGGCAGCCATTGGCGATCCCATc > 7:219645/1‑149 (MQ=255) aTTATCCGGTGAGTAAAGTAGTCTGTGTTGGCAGTAACTATGCCAAACATATTAAAGAGATGGGGAGCGCAGTGCCCGAAGAGCCAGTGCTGTTTATTAAACCAGAAACGGCACTGTGCGATCTGCGGCAGCCATTGGCGATCCCATcc < 4:3880/149‑1 (MQ=255) aTCCGGTGAGTAAAGTAGTCTGTGTTGGCAGTAACTATGCCAAACATATTAAAGAGATGGGCAGTGCAGTGCCCGAAGAGCCAGTGCTGTTTATTAAACCAGAAACGGCACTGTGCGATCTGCGGCAGCCATTGGCGATCCCATCCGAt > 5:181341/1‑149 (MQ=255) aTCCGGTGAGTAAAGTAGTCTGTGTTGGCAGTAACTATGCCAAACATATTAAAGAGATGGGCAGTGCAGTGCCCGAAGAGCCAGTGCTGTTTATTAAACCAGAAACGGCACTGTGCGATCTGCGGCAGCCATTGGCGATCCCATCCGAt > 5:187901/1‑149 (MQ=255) tCCGGTGAGTAAAGTAGTCTGTGTTGGCAGTAACTATGCCAAACATATTAAAGAGATGGGCAGCGCAGTGCCCGAAGAGCCAGTGCTGTTTATTAAACCAGAAACGGCACTGTGCGATCTGCGGCAGCCATTGGCGATCCCATCCGAtt > 2:78706/1‑149 (MQ=255) cGGTGAGTAAAGTAGTCTGTGTTGGCAGTAACTATGCCAAACATATTAAAGAGATGGGCAGCGCAGTGCCCGAAGAGCCAGTGCTGTTTATTAAACCAGAAACGGCACTGTGCGATCTGCGGCAGCCATTGGCGATCCCATCCGAttt < 5:273404/148‑1 (MQ=255) cGGTGAGTAAAGTAGTCTGTGTTGGCAGTAACTATGCCAAACATATTAAAGAGATGGGCAGCGCAGTGCCCGAAGAGCCAGTGCTGTTTATTAAACCAGAAACGGCACTGTGCGATCTGCGGCAGCCATTGGCGATCCCATCCGATTTc > 1:307039/1‑149 (MQ=255) ggTGAGTAAAGTAGTCTGTGTTGGCAGTAACTATGCCAAACATATTAAAGAGATGGGCAGCGCAGTGCCCGAAGAGCCAGTGCTGTTTATTAAACCAGAAACGGCACTGTGCGATCTGCGGCAGCCATTGGCGATCCCATCCGATTTCg < 1:268819/149‑1 (MQ=255) ggTGAGTAAAGTAGTCTGTGTTGGCAGTAACTATGCCAAACATATTAAAGAGATGGGCAGCGCAGTGCCCGAAGAGCCAGTGCTGTTTATTAAACCAGAAACGGCACTGTGCGATCTGCGGCAGCCATTGGCGATCCCATCCGATTTCg < 5:403081/149‑1 (MQ=255) gTGAGTAAAGTAGTCTGTGTTGGCAGTAACTATGCCAAACATATTAAAGAGATGGGCAGCGCAGTGCCCGAAGAGCCAGTGCTGTTTATTAAACCAGAAACGGCACTGTGCGATCTGCGGCAGCCATTGGCGATCCCATCCGATTTCgg > 2:284/1‑149 (MQ=255) gTAAAGTAGTCTGTGTTGGCAGTAACTATGCCAAACATATTAAAGAGATGGGCAGCGCAGTGCCCGAAGAGCCAGTGCTGTTTATTAAACCAGAAACGGCACTGTGCGATCTGCGGCAGCCATTGGCGATCCCATCCGATTTCGgtt > 8:188928/1‑147 (MQ=255) tAAAGTAGTCTGTGTTGGCAGTAACTATGCCAAACATATTATAGAGATGGGCAGCGCAGTGCCCGAAGAGCCAGTGCTGTTTATTAAACCAGAAACGGCACTGTGCGATCTGCGGCAGCCATTGGCGATCCCATCCGATTTCGgttca < 4:47364/148‑1 (MQ=255) tAAAGTAGTCTGTGTTGGCAGTAACTATGCCAAACATATTAAAGAGATGGGCAGTGCAGTGCCCGAAGAGCCAGTGCTGTTTATTAAACCAGAAACGGCACTGTGCGATCTGCGGCAGCCATTGGCGATCCCATCCGATTTCGgttcag < 6:187901/149‑1 (MQ=255) tAAAGTAGTCTGTGTTGGCAGTAACTATGCCAAACATATTAAAGAGATGGGCAGCGCAGTGCCCGAAGAGCCAGTGCTGTTTATTAAACCAGAAACGGCACTGTGCGATCTGCGGCAGCCATTg > 2:66485/1‑124 (MQ=255) tAAAGTAGTCTGTGTTGGCAGTAACTATGCCAAACATATTAAAGAGATGGGCAGCGCAGTGCCCGAAGAGCCAGTGCTGTTTATTAAACCAGAAACGGCACTGTGCGATCTGCGGCAGCCATTg < 1:66485/124‑1 (MQ=255) tAAAGTAGTCTGTGTTGGCAGTAACTATGCCAAACATATTAAAGAGATGGGCAGCGCAGTGCCCGAAGAGCCAGTGCTGTTTATTAAACCAGAAACGGCACTGTGCGATCTGCGGCAGCCATTGGCGATCCCATCCGATTTCGgttcag > 2:194097/1‑149 (MQ=255) aaaGTAGTCTGTGTTGGCAGTAACTATGCCAAACATATTAAAGAGATGGGCAGTGCAGTGCCCGAAGAGCCAGTGCTGTTTATTAAACCAGAAACGGCACTGTGCGATCTGCGGCAGCCATTGGCGATCCCATCCGATTTCGgttcag < 6:181341/148‑1 (MQ=255) gtCTGTGTTGGCAGTAACTATGCCAAACATATTAAAGAGATGGGCAGCGCAGTGCCCGAAGAGCCAGTGCTGTTTATTAAACCAGAAACGGCACTGTGCGATCTGCGGCAGCCATTGGCGATCCCATCCGATTTCGGTTCAGTtcatc < 2:370804/148‑1 (MQ=255) tCTGTGTTGGCAGTAACTATGCCAAACATATTAAAGAGATGGGCAGCGCAGTGCCCGAAGAGCCAGTGCTGTTTATTAAACCAGAAACGGCACTGTGCGATCTGCGGCAGCCATTGGCGATCCCATCCGATTTCGGTTCAGTTcatcat < 1:78706/149‑1 (MQ=255) tgtgTTGGCAGTAACTATGCCAAACATATTAAAGAGATGGGCAGCGCAGTGCCCGAAGAGCCAGTGCTGTTTATTAAACCAGAAACGGCACTGTGCGATCTGCGGCAGCCATTGGCGATCCCATCCGATTTCGGTTCAGTtcatca < 1:37151/146‑1 (MQ=255) tgtgTTGGCAGTAACTATGCCAAACATATTAAAGAGATGGGCAGCGCAGTGCCCGAAGAGCCAGTGCTGTTTATTAAACCAGAAACGGCACTGTGCGATCTGCGGCAGCCATTGGCGATCCCATCCGATTTCGGTTCAGTtcatca > 2:37151/1‑146 (MQ=255) tgtgTTGGCAGTAACTATGCCAAAAATATTAAAGAGATGGGCAGTGCACTACACGAAGAGCCAGTGCTGTTTATTAAACCAGAAACGGCACTGTGCGAACTGCGGCAGCCATTATCGATCCCATCCGATTTCGGTTCAGTTAATCATg > 8:441834/1‑148 (MQ=255) tgtTGGCAGTAACTATGCCAAACATATTAAAGAGATGGGCAGCGCAGTGCCCGAAGAGCCAGTGCTGTTTATTAAACCAGAAACGGCACTGTGCGATCTGCGGCAGCCATTGGCGATCCCATCCGATTTCGGTTCAGTTCATCATGaa < 8:219645/148‑1 (MQ=255) tgtTGGCAGTAACTATGCCAAACATATTAAAGAGATGGGCAGCGCAGTGCCCGAAGAGCCAGTGCTGTTTATTAAACCAGAAACGGCACTGTGCGATCTGCGGCAGCCATTGGCGATCCCATCCGATTTCGGTTCAGTTCATCATGaa < 7:320131/148‑1 (MQ=255) ttGGCAGTAACTATTCCAAACATATTAAAGCTATGGGCATCGCAGTTCCCGAAGAGCCATTGCTGTTTATTAAACCAGAAAAGGCACTGTGCTATCTTCGGCAGCCATTGGCGATCCCATCCGATTTCGTTTCAGTTCATCATGAAGt < 7:56421/148‑1 (MQ=255) gCAGTAACTATGCCAAACATATTAAAGAGATGGGCAGCGCAGTGCCCGAAGAGCCAGTGCTGTTTATTAAACCAGAAACGGCACTGTGCGATCTGCGGCAGCCATTGGCGATCCCATCCGATTTCGGTTCAGTTCATCATGAAGTCGaa < 2:307039/149‑1 (MQ=255) cAGTAACTATGCCAAACATATTAAAGAGATGGGCAGCGCAGTGCCCGAAGAGCCAGTGCTGTTTATTAAACCAGAAACGGCACTGTGCGATCTGCGGCAGCCATTGGCGATCCCATCCGAttt < 6:402101/123‑1 (MQ=255) gTAACTATGCCAAACATATTAAAGAGATGGGCAGCGCAGTGCCCGAAGAGCCAGTGCTGTTTATTAAACCAGAAACGGCACTGTGCGATCTGCGGCAGCCATTGGCGATCCCATCCGATTTCGGTTCAGTTCATCATGAAGTCGAACTg > 1:334881/1‑149 (MQ=255) tAACTATGCCAAACATATTAAAGAGATGGGCAGCGCAGTGCCCGAAGAGCCAGTGCTGTTTATTAAACCAGAAACGGCACTGTGCGATCTGCGGCAGCCATTGGCGATCCCATCCGATTTCGGTTCAGTTCATCATGAAGTCGAACTgg > 6:185510/1‑149 (MQ=255) tAACTATGCCAAACATATTAAAGAGATGGGCAGCGCAGTGCCCGAAGAGCCAGTGCTGTTTATTAAACCAGAAACGGCACTGTGCGATCTGCGGCAGCCATTGGCGATCCCATCCGATTTCGGTTCAGTTCATCATGAAGTCGAACTgg < 1:284/149‑1 (MQ=255) tGCCAAACATATTAAAGAGATGGGCAGCGCAGTGCCCGAAGAGCCAGTGCTGTTTATTAAACCAGAAACGGCACTGTGCGATCTGCGGCAGCCATTGGCGATCCCATCCGATTTCGGTTCAGTTCATCATGAAGTCGAACTGGCGgtgt < 8:119166/149‑1 (MQ=255) ccAAACATATTAAAGAGATGGGCAGCGCAGTGCCCGAAGAGCCAGTGCTGTTTATTAAACCAGAAACGGCACTGTGCGATCTGCGGCAGCCATTGGCGATCCCATc < 4:146217/106‑1 (MQ=255) cAAACATATTAAAGAGATGGGCAGCGCAGTGCCCGAAGAGCCAGTGCTGTTTATTAAACCAGAAACGGCACTGTGCGATCTGCGGCAGCCATTGGCGATCCCATCCGATTTCGGTTCAGTTCATCATGAAGTCGAACTGGCg < 7:39344/142‑1 (MQ=255) cAAACATATTAAAGAGATGGGCAGCGCAGTGCCCGAAGAGCCAGTGCTGTTTATTAAACCAGAAACGGCACTGTGCGATCTGCGGCAGCCATTGGCGATCCCATCCGATTTCGGTTCAGTTCATCATGAAGTCGAACTGGCg > 8:39344/1‑142 (MQ=255) cAAACATATTAAAGAGATGGGCAGCGCAGTGCCCGAAGAGCCAGTGCTGTTTATTAAACCAGAAACGGCACTGTGCGATCTGCGGCAGCCATTGGCGATCCCATCCGATTTCGGTTCAGTTCATCATGAAGTCGAACTGGCGGTGTTGa > 2:234458/1‑149 (MQ=255) cAAACATATTAAAGAGATGGGCAGCGCAGTGCCCGAAGAGCCAGTGCTGTTTATTAAACCAGAAACGGCACTGTGCGATCTGCGGCAGCCATTGGCGATCCCATCCGATTTCGGTTCAGTTCATCATGAAGTCGAACTAGCGGTGTTGa < 5:456595/149‑1 (MQ=255) aaaCATATTAAAGAGATGGGCAGCGCAGTGCCCGAAGAGCCAGTGCTGTTTATTAAACCAGAACCGGCACTGTGCGATCTGCGGCAGCCATTGGCGATCCCATCCGATTGCGGTTCAGGTCATCATGAAGTCGAACTGGCGGTGTTgct > 6:7520/1‑147 (MQ=255) aaaCATATTAAAGAGATGGGCAGCGCAGTGCCCGAAGAGCCAGTGCTGTTTATTAAACCAGAAACGGCACTGTGCGATCTGCGGCAGCCATTGGCGATCCCATCCGATTTCGGTTCAGTTCATCATGAAGTCGAACTGGCGGTGTTGAt < 5:185510/149‑1 (MQ=255) aaaCATATTAAAGAGATGGGCAGCGCAGTGCCCGAAGAGCCAGTGCTGTTTATTAAACCAGAAACGGCACTGTGCGATCTGCGGCAGCCATTGGCGATCCCATCCGATTTCGGTTCAGTTCATCATGAAGTCGAACTGGCGGTGTTGAt < 7:50183/149‑1 (MQ=255) aaCATATTAAAGAGATGGGCAGCGCAGTGCCCGAAGAGCCAGTGCTGTTTATTAAACCAGAAACGGCACTGTGCGATCTGCGGCAGCCATTGGCGATCCCATCCGATTTCGGTTCAGTTcatcat < 2:102099/125‑1 (MQ=255) aaCATATTAAAGAGATGGGCAGCGCAGTGCCCGAAGAGCCAGTGCTGTTTATTAAACCAGAAACGGCACTGTGCGATCTGCGGCAGCCATTGGCGATCCCATCCGATTTCGGTTCAGTTcatcat > 1:102099/1‑125 (MQ=255) aCATATTAAAGAGATGGGCAGCGCAGTGCCCGAAGAGCCAGTGCTGTTTATTAAACCAGAAACGGCACTGGGCGATCTGCGGCAGCCATTGGCGATCCCATCCGATTTCGGTTCAGTTCATCATGAAGTCGAACTGGCGGTGTTGATTg < 4:52690/149‑1 (MQ=255) atTAAAGAGATGGGCAGCGGTGTGCGCGAAGAGCCTCTGATGTTTATTTAACCAGAAACGGCACTGTGCGATCTGCGGCAGCCATTTTCGATCACATCCGATTTCGgttcagttct < 6:412678/116‑2 (MQ=255) atTAAAGAGATGGGCAGCGCAGTGCCCGAAGAGCCAGTGCTGTTTATTAAACCAGAAACGGCACTGTGCGATCTGCGGCAGCCATTGGCGATCCCATCCGATTTCGGTTCAGTTCATCATGAAGTCGAACTGGCGGTGTTGATTGgcgc > 5:39058/1‑149 (MQ=255) atTAAAGAGATGGGCAGCGCAGTGCCCGAAGAGCCAGTGCTGTTTATTAAACCAGAAACGGCACTGTGCGATCTGCGGAAGCCATTGTCGATCCCATCCGATTTCGgttcagttca > 5:412678/1‑116 (MQ=255) aaaGAGATGGGCAGCGCAGTGCCCGAAGAGCCAGTGCTGTTTATTAAACCAGAAACGGCACTGTGCGATCTGCGGCAGCCATTGGCGATCCCATCCGATTTCGGTTCAGTtcatc < 3:72923/115‑1 (MQ=255) aaaGAGATGGGCAGCGCAGTGCCCGAAGAGCCAGTGCTGTTTATTAAACCAGAAACGGCACTGTGCGATCTGCGGCAGCCATTGGCGATCCCATCCGATTTCGGTTCAGTtcatc > 4:72923/1‑115 (MQ=255) aaGAGATGGGCAGCGCAGTGCCCGAAGAGCCAGTGCTGTTTATTAAACCAGAAACGGCACTGTGCGATCTGCGGCAGCCATTGGCGATCCCATCCGATTTCGGTTCAGTTCATCATGAAGTCGAACTGGCGGTGTTGATTGGCGCGaca > 2:260874/1‑149 (MQ=255) agaTGGGCAGCGCAGTGCCCGAAGAGCCAGTGCTGTTTATTAAACCAGAAACGGCACTGTGCGATCTGCGGCAGCCATTGGCGATCCCATCCGATTTCGGTTCAGTTCATCATGAAGTCGAACTGGCGGTGTTGATTGGCGCGACACTg > 8:47160/1‑149 (MQ=255) gaTGGGCAGCGCAGTGCCCGAAGAGCCAGTGCTGTTTATTAAACCAGAAACGGCACTGTGCGATCTGCGGCAGCCATTGGCGATCCCATCCGATTTCGGTTCAGTTCATCATGAAGTCGAACTGGCGGTGTTGATTGGCGCGACACTGc < 8:246848/149‑1 (MQ=255) ggCAGCGCAGTGCCCGAAGAGCCAGTGCTGTTTATTAAACCAGAAACGGCACTGTGCGATCTGCGGCAGCCATTGGCGATCCCATCCGATTTCGGTTCAGTTCATCATGAAGTCGAACTGGCGGTGTTGATTGGCGCGACACTGCGTCa < 2:334881/149‑1 (MQ=255) gCAGCGCAGTGCCCGAAGAGCCAGTGCTGTTTATTAAACCAGAAACGGCACTGTGCGATCTGCGGCAGCCATTGGCGATCCCATCCGATTTCGGTTCAGTTCATCATGAAGTCGAACTGGCGGTGTTGATTGGCGCGACACTGCGTCAg < 7:188928/149‑1 (MQ=255) cAGCGCAGTGCCCGAAGAGCCAGTGCTGTTTATTAAACCAGAAACGGCACTGTGCGATCTGCGGCAGCCATTGGCGATCCCATCCGATTTCGGTTCAGTTCATCATGAAGTCGAACTGGCGGTGTTGATTGGCGCGACACTGCGTCAgg < 1:194097/149‑1 (MQ=255) | GTCGGCGCGGGTTTTCATATCCACGATAAGGTGAGGGGAACGTTATGTATCAACATCACAACTGGCAAGGTGCGCTGCTGGATTATCCGGTGAGTAAAGTAGTCTGTGTTGGCAGTAACTATGCCAAACATATTAAAGAGATGGGCAGCGCAGTGCCCGAAGAGCCAGTGCTGTTTATTAAACCAGAAACGGCACTGTGCGATCTGCGGCAGCCATTGGCGATCCCATCCGATTTCGGTTCAGTTCATCATGAAGTCGAACTGGCGGTGTTGATTGGCGCGACACTGCGTCAGG > NC_000913/1228035‑1228328 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |