| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 786738 | NA (NA) | 3 (0.030) | 3/240 | NT | NA | noncoding (4/35 nt) | REP70 (repetitive extragenic palindromic) element; contains 1 REP sequences | REP70 (repetitive extragenic palindromic) element; contains 1 REP sequences |
| ? | NC_000913 | = 786769 | NA (NA) | noncoding (35/35 nt) | REP70 (repetitive extragenic palindromic) element; contains 1 REP sequences | REP70 (repetitive extragenic palindromic) element; contains 1 REP sequences | |||||
GGTAAGAGCATCACCGATGCCTGCATCGGCTGGGAAGATACCGATGCTCTGTTACGTCAACTGGCGAATGCAGTAAAAGCGCGTCGCGGGTAAGGTTTAATTGTCGGATGCGCCGTCAGAGTGGCGTATCCGATGAATCACCACAGgcctgat‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/786593‑786738‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GCCTGATGCGACGCTGCGCGACTTATCAGGCCTGTGGTGATTCATCGGATACGCCACTCTGACGGCGCATCCGACAATTAAACCTTACCCGCGACGCGCTTTTACTGCATTCGCCAGTTGACGTAACAGAGCATCGGTATCTTCCCAGCCGATG < NC_000913/786769‑786616 GGTAAGAGCATCACCGATGCCTGCATCGGCTGGGAAGATACCGATGCTCTGTTACGTCAACTGGCGAATGCAGTAAAAGCGCGTCGCGGGTAAGGTTTAATTGTCGGATGCGCCGTCAGAGTGGCGTATCCGATGAATCACCACAGGCC < 3:176156/149‑1 GTAAGAGCATCACCGATGCCTGCATCGGCTGGGAAGATACCGATGCTCTGTTACGTCAACTGGCGAATGCAGTAAAAGCGCGTCGCGGGTAAGGTTTAATTGTCGGATGCGCCGTCAGAGTGGCGTATCCGATGAATCACCACAGGCCT > 4:400738/1‑149 AGAGCATCACCGATGCCTGCATCGGCTGGGAAGATACCGATGCTCTGTTACGTCAACTGGCGAATGCAGTAAAAGCGCGTCGCGGGTAAGGTTTAATTGTCGGATGCGCCGTCAGAGTGGCGTATCCGATGAATCACCACAGGCCTGAT < 2:127393/149‑1 TACCGATGCTCTGTTACGTCAACTGGCGAATGCAGTAAAAGCGCGTCGCGGGTAAGGTTTAATTGTCGGATGCGCCGTCAGAGTGGCGTATCCGATGAATCACCACAGGCCTGATGCGACGCTGCGCGACTTATCAGGCCTGTGGTGAT < 8:308082/149‑1 CGATGCTCTGTTACGTCAACTGGCGAATGCAGTAAAAGCGCGTCGCGGGTAAGGTTTAATTGTCGGATGCGCCGTCAGAGTGGCGTATCCGATGAATCACCACAGGC > 5:298001/1‑107 CGATGCTCTGTTACGTCAACTGGCGAATGCAGTAAAAGCGCGTCGCGGGTAAGGTTTAATTGTCGGATGCGCCGTCAGAGTGGCGTATCCGATGAATCACCACAGGC < 6:298001/107‑1 ATCCGATGAATCACCACAGGCCTGATAAGTCGCGCAGCGTCGCATCAGGCCTGTGGTGATTCATCGGATACGCCACTCTGACGGCGCATCCGACAATTAAACCTTACCCGCGACGCGCTTTTACTGCATTCGCCAGTTGACGTAA > 2:203223/1‑145 ATCCGATGAATCACCACAGGCCTGATAAGTCGCGCAGCGTCGCATCAGGCCTGTGGTGATTCATCGGATACGCCACTCTGACGGCGCATCCGACAATTAAACCTTACCCGCGACGCGCTTTTACTGCATTCGCCAGTTGACGTAA < 1:203223/145‑1 GCCTGATGCGACGCTGCGCGACTTATCAGGCCTGTGGTGATTCATCGGATACGCCACTCTGACGGCGCATCCGACAATTAAACCTTACCCGCGACGCGCTTTTACTGCATTCGCCAGTTGACGTAACAGAGCATCGGTATCTTCCCAG < 3:278575/148‑1 CCTGATGCGACGCTGCGCGACTTATCAGGCCTGTGGTGATTCATCGGATACGCCACTCTGACGGCGCATCCGACAATTAAACCTTACCCGCGACGCGCTTTTACTGCATTCGCCAGTTGACGTAACAGAGCATCGG > 8:315285/1‑136 CCTGATGCGACGCTGCGCGACTTATCAGGCCTGTGGTGATTCATCGGATACGCCACTCTGACGGCGCATCCGACAATTAAACCTTACCCGCGACGCGCTTTTACTGCATTCGCCAGTTGACGTAACAGAGCATCGG < 7:315285/136‑1 TGATGCGACGCTGCGCGACTTATCAGGCCTGTGGTGATTCATCGGATACGCCACTCTGACGGCGCATCCGACAATTAAACCTTACCCGCGACGCGCTTTTACTGCATTCGCCAGTTGACGTAACAGAGCGTCGGTATCTTCCCAGCCGA > 6:161893/1‑149 TGATGCGACGCTGCGCGACTTATCAGGCCTGTGGTGATTCATCGGATACGCCACTCTGACGGCGCATCCGACAATTAAACCTTACCCGCGACGCGCTTTTACTGCATTCGCCAGTTGACGTAACAGAGCATCGGTATCTTCCCAGCCGA > 2:374383/1‑149 GATGCGACGCTGCGCGACTTATCAGGCCTGTGGTGATTCATCGGATACGCCACTCTGACGGCGCATCCGACAATTAAACCTTACCCGCGACGCGCTTTTACTGCATTCGCCAGTTGACGTAACAGAGCATCGGT < 8:70057/134‑1 GATGCGACGCTGCGCGACTTATCAGGCCTGTGGTGATTCATCGGATACGCCACTCTGACGGCGCATCCGACAATTAAACCTTACCCGCGACGCGCTTTTACTGCATTCGCCAGTTGACGTAACAGAGCATCGGT > 7:70057/1‑134 ATGCGACGCTGCGCGACTTATCAGGCCTGTGGGGATTCATCGGATACGCCACTCTGACGGCGCATCCGACAATTAAACCTTACCCGCGACGCGCTTTTACTGCATTCGCCAGTTGACGTAACAGAGCATCGGTATCTTCCCAGCCGATG < 4:430533/149‑1 TGCGACGCTGCGCGACTTATCAGGCCTGTGGTGATTCATCGGATACGCCACTCTGACGGCGCATCCGACAATTAAACCTTACCCGCGACGCGCTTTTACTGCATTCGCCAGTTGACGTAACAGAGCATCGGTATCTTCCCAGCCGATG > 4:265316/1‑148 GGTAAGAGCATCACCGATGCCTGCATCGGCTGGGAAGATACCGATGCTCTGTTACGTCAACTGGCGAATGCAGTAAAAGCGCGTCGCGGGTAAGGTTTAATTGTCGGATGCGCCGTCAGAGTGGCGTATCCGATGAATCACCACAGgcctgat‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/786593‑786738‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GCCTGATGCGACGCTGCGCGACTTATCAGGCCTGTGGTGATTCATCGGATACGCCACTCTGACGGCGCATCCGACAATTAAACCTTACCCGCGACGCGCTTTTACTGCATTCGCCAGTTGACGTAACAGAGCATCGGTATCTTCCCAGCCGATG < NC_000913/786769‑786616 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |