| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1751652 = | 76 (0.810) | 4 (0.040) | 4/240 | NT | 5.1% | coding (73/648 nt) | ydhW | FNR, Nar, NarP‑regulated protein; putative subunit of YdhYVWXUT oxidoreductase complex |
| ? | NC_000913 | 1751699 = | 76 (0.850) | coding (26/648 nt) | ydhW | FNR, Nar, NarP‑regulated protein; putative subunit of YdhYVWXUT oxidoreductase complex | |||||
AACCCGCGAAACATTGCAGCGTCTGGGGCTGGAAGATATTGCCGCCGATCTGGCAGCACACAATCTACTGCCTGCGTAAGGAATGGGTAAGATGAACCATCAGGATGAATTGCCGTTAGCGAAAGTCAGCGAAGTTGACGAGGCGAAGCGGCAAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/1751806‑1751652‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcaatTCATCCTGATGGTTCATCTTACCCATTCCTTACGCAGGCAGTAGATTGTGTGCTGCCAGATCGGCGGCAATATCTTCCAGCCCCAGACGCTGCAATGTTTCGCGGGTTGGACAACCAAGCTGTGGGTCCCAGCCCATTTCTTTGTA > NC_000913/1751699‑1751844 AACCCGCGAAACATTGCAGCGTCTGGGGCTGGAAGATATTGCCGCCGATCTGGCAGCACACAATCTACTGCCTGCGTAAGGAATGGGTAAGATGAACCATCAGGATGAATTGCCGTTAGCGAAAGTCAGCGAAGTTGACGAGGCGAAGC > 1:29402/1‑149AACCCGCGAAACATTGCAGCGTCTGGGGCTGGAAGATATTGCCGCCGATCTGGCAGCACACAATCTACTGCCTGCGTAAGGAATGGGTAAGATGAACCATCAGGATGAATTGCCGTTAGCGAAAGTCAGCGAAGTTGACGAGGCGAAGC > 3:274551/1‑149AACCCGCGAAACATTGCAGCGTCTGGGGCTGGAAGATATTGCCGCCGATCTGGCAGCACACAATCTACTGCCTGCGTAAGGAATGGGTAAGATGAACCATCAGGATGAATTGCCGTTAGCGAAAGTCAGCGAAGTTGACGAGGCGAAGC < 5:153850/149‑1 ACCCGCGAAACATTGCAGCGTCTGGGGCTGGAAGATATTGCCGCCGATCTGGCAGCACACAATCTACTGCCTGCGTAAGGAATGGGTAAGATGAACCATCAGGATGAATTGCCGTTAGCGAAAGTCAGCGAAGTTGACGAGGCGAAGCG < 4:144252/149‑1 CGCGAAACATTGCAGCGTCTGGGGCTGGAAGATATTGCCGCCGATCTGGCAGCACACAATCTACTGCCTGCGTAAGGAATGGGTAAGATGAACCATCAGGATGAATTGCCGTTAGCGAAAGTCAGCGAAGTTGACGAGGCGAAGCGGC > 6:39824/1‑148 CGAAACATTGCAGCGTCTGGGGCTGGAAGATATTGCCGCCGATCTGGCAGCACACAATCTACTGCCTGCGTAAGGAATGGGTAAGATGAACCATCAGGATGAATTGCCTTTAGCGAAAGTCAGCGAAGTTGACGAGGCGAAGCGGCAAT < 3:4149/149‑1 AGGATGAATTGCCGTTAGCGAAAGTCAGCGAAGTTGACGAGGCGAAGCGGCAATTCATCCTGATGGTTCATCTTACCCATTCCTTACGCAGGCAGTAGATTGTGTGCTGCCAGATCGGCGGCAATATCTTCCAGCCCCAGACGCTGCAA > 6:136053/1‑149 ATGAATTGCCGTTAGCGAAAGTCAGCGAAGTTGACGAGGCGAAGCGGCAATTCATCCTGATGGTTCATCTTACCCATTCCTTACGCAGGCAGTAGATTGTGTGCTGCCAGATCGGCGGCAATATCTTCCAGCCCCAGACGCTGCAATGT > 7:101339/1‑149 ATTGCCGTTAGCGAAAGTCTGCGAAGTTGACGAGGCGAAGCGGCAATTCATCCTGATGGTTCATCTTACCCATTCCTTACGCAGGCAGTAGATTGTGTGCTGCCAGATCGGCGGCAATATCTTCCTGCCCCAGCCGCTGCAATGTTTCG > 5:307398/1‑149 TTGCCGTTAGCGAAAGTCAGCGAAGTTGACGAGGCGAAGCGGCAATTCATCCTGATGGTTCATCTTACCCATTCCTTACGCAGGCAGTAGATTGTGTGCTGCCAGATCGGCGGCAATATCTTCCAGCCCCAGACGCTGCAATGTTTCGC < 5:136053/149‑1 GGCAATTCATCCTGATGGTTCATCTTACCCATTCCTTACGCAGGCAGTAGATTGTGTGCTGCCAGATCGGCGGCAATATCTTCCAGCCCCAGACGCTGCAATGTTTCGCGGGTTGGACAACCAAGCTGTGGGTCCCAGCCCATTTCTTT < 2:204846/149‑1 GGCAATTCATCCTGATGGTTCATCTTACCCATTCCTTACGCAGGCAGTAGATTGTGTGCTGCCAGATCGGCGGCAATATCTTCCAGCCCCAGACGCTGCAATGTTTCGCGGGTTGGACAACCAAGCTGTGGGTCCCAGCCCATTTCTTT < 7:284986/149‑1 GGCAATTCATCCTGATGGTTCATCTTACCCATTCCTTACGCAGGCAGTAGATTGTGTGCTGCCAGATCGGCGGCAATATCTTCCAGCCCCAGACGCTGCAATGTTTCGCGGGTTGGACAACCAAGCTGTGGGTCCCAGCCCATTTCTTT < 3:144252/149‑1 CAATTCATCCTGATGGTTCATCTTACCCATTCCTTACGCAGGCAGTAGATTGTGTGCTGCCAGATCGGCGGCAATATCTTCCAGCCCCAGACGCTGCAATGTTTCGCGGGTTGGACAACCAAGCTGTGGGTCCCAGCCCATTTCTTTG > 4:358320/1‑148 AATTCATCCTGATGGTTCATCTTACCCATTCCTTACGCAGGCAGTAGATTGTGTGCTGCCAGATCGGCGGCAATATCTTCCAGCCCCAGACGCTGCAATGTTTCGCGGGTTGGACAACCAAGCTGTGGGTCCCAGCCCATTTCTTTGTA < 7:270151/149‑1 AATTCATCCTGATGGTTCATCTTACCCATTCCTTACGCAGGCAGTAGATTGTGTGCTGCCAGATCGGCGGCAATATCTTCCAGCCCCAGACGCTGCAATGTTTCGCGGGTTGGACAACCAAGCTGTGGGTCCCAGCCCATTTCTTTG > 6:369988/1‑147 ATTCATCCTGATGGTTCATCTTACCCATTCCTTACGCAGGCAGTAGATTGTGTGCTGCCAGATCGGCGGCAATATCTTCCAGCCCCAGACGCTGCAATGTTTCGCGGGTTGGACAACCAAGCTGTGG < 7:181379/127‑1 ATTCATCCTGATGGTTCATCTTACCCATTCCTTACGCAGGCAGTAGATTGTGTGCTGCCAGATCGGCGGCAATATCTTCCAGCCCCAGACGCTGCAATGTTTCGCGGGTTGGACAACCAAGCTGTGG > 8:181379/1‑127 AACCCGCGAAACATTGCAGCGTCTGGGGCTGGAAGATATTGCCGCCGATCTGGCAGCACACAATCTACTGCCTGCGTAAGGAATGGGTAAGATGAACCATCAGGATGAATTGCCGTTAGCGAAAGTCAGCGAAGTTGACGAGGCGAAGCGGCAAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/1751806‑1751652‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcaatTCATCCTGATGGTTCATCTTACCCATTCCTTACGCAGGCAGTAGATTGTGTGCTGCCAGATCGGCGGCAATATCTTCCAGCCCCAGACGCTGCAATGTTTCGCGGGTTGGACAACCAAGCTGTGGGTCCCAGCCCATTTCTTTGTA > NC_000913/1751699‑1751844 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |