| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4122323 = | 90 (0.960) | 6 (0.070) | 6/238 | NT | 6.7% | intergenic (‑36/+57) | hslV/ftsN | peptidase component of the HslUV protease/essential cell division protein |
| ? | NC_000913 | 4122343 = | 82 (0.930) | intergenic (‑56/+37) | hslV/ftsN | peptidase component of the HslUV protease/essential cell division protein | |||||
TTGGCCCGGTGAAAGGCAAAGAGAACGCAGACAGCACCCTCAATCGGTTGAAGATGGCGGGTCATACAAACTGCATTCGGCTCGCCGCCGGGGGTTGAAACCCTCAAAATCCCCCCCATCTATAATTGCATTATGCCCCGTACTTTTGTACGGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4122477‑4122323‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtacggggCATAATGCAATTATAGATGGGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTATGACCCGCCATCTTCAACCGATTGAGGGTGCTGTCTGCGTTCTCTTTGCCTTTCACCGGGCCAATGACCACACGATT > NC_000913/4122343‑4122490 TTGGCCCGGTGAAAGGCAAAGAGAACGCAGACAGCACCCTCAATCGGTTGAAGATGGCGGGTCATACAAACTGCATTCGGCTCGCCGCCGGGGGTTGAAACCCTCCAAATCCCCCCCATCTATAATTGCATTATGCCCCGTACTTTTG > 4:7233/1‑148TTGGCCCGGTGAAAGGCAAAGAGAACGCAGACAGCACCCTCAATCGGTTGAAGATGGCGGGTCATACAAACTGCATTCGGCTCGCCGCCGGGGGTTGAAACCCTCAAAATCCCCCCCATCTATAATTGCATTATGCCCCGTACTTTTG > 7:232192/1‑148 GGCCCGGTGAAAGGCAAAGAGAACGCAGACAGCACCCTCAATCGGTTGAAGATGGCGGGTCATACAAACTGCATTCGGCTCGCCGCCGGGGGTTGAAACCCTCAAAATCCCCCCCATCTATAATTGCATTATGCCCCGTACTTTTGTAC > 2:444009/1‑149 CCCGGTGAAAGGCAAAGAGAACGCAGACAGCACCCTCAATCGGTTGAAGATGGCGGGTCATACAAACTGCATTCGGCTCGCCGCCGGGGGTTGAAACCCTCAAAATCCCCCCCATCTATAATTGCATTATGCCCCGTACTTTTGTACGG < 1:444009/149‑1 CCCGGTGAAAGGCAAAGAGAACGCAGACAGCACCCTCAATCGGTTGAAGATGGCGGGTCATACAAACTGCATTCGGCTCGCCGCCGGGGGTTGAAACCCTCAAAATCCCCCCCATCTATAATTGCATTATGCCCCGTACTTTTGTACGG < 4:114306/149‑1 CCCGGTGAAAGGCAAAGAGAACGCAGACAGCACCCTCAATCGGTTGAAGATGGCGGGTCATACAAACTGCATTCGGCGCGCCGCCGGGGGTTGAAACCCTCAAAATCCCCCCCATCTATAATTGCATTATGCCCCGTACTTTTGTACGG < 1:400204/149‑1 AAGGCAAAGAGAACGCAGACAGCACCCTCAATCGGTTGAAGATGGCGGGTCATACAAACTGCATTCGGCTCGCCGCCGGGGGTTGAAACCCTCAAAATCCCCCCCATCTATAATTGCATTATGCCCCGTACAAAAGTACGGGGCATAAT < 7:246715/149‑1 AAAGAGAACGCAGACAGCACCCTCAATCGGTTGAAGATGGCGGGTCATACAAACTGCATTCGGCTCGCCGCCGGGGGTTGAAACCCTCAAAATCCCCCCCATCTATAATTGCATTATGCCCCGTACTTTTGTACGG < 7:247075/136‑1 AAAGAGAACGCAGACAGCACCCTCAATCGGTTGAAGATGGCGGGTCATACAAACTGCATTCGGCTCGCCGCCGGGGGTTGAAACCCTCAAAATCCCCCCCATCTATAATTGCATTATGCCCCGTACTTTTGTACGG > 8:247075/1‑136 AGAGAACGCAGACAGCACCCTCAATCGGTTGAAGATGGCGGGTCATACAAACTGCATTCGGCTCGCCGCCGGGGGTTGAAACCCTCAAAATCCCCCCCATCTATAATTGCATTATGCCCCGTACAAAAGTACGGGGCATAATGCAATTA > 3:400088/1‑149 AATCGGTTGAAGATGGCGGGTCATACAAACTGCATTCGGCTCGCCGCCGGGGGTTGAAACCCTCAAAATCCCCCCCATCTATAATTGCATTATGCCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGATTTTGAG < 4:400088/147‑1 AACCCTCAAAATCCCCCCCATCTATAATTGCATTATGCCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTATGACCCGCCATCTTCAA < 7:270273/145‑1 AACCCTCAAAATCCCCCCCATCTATAATTGCATTATGCCCCGTACAAAAGTACGGGGCATAATGCAATTATAGATGGGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTATGACCCGCCATCTTCAA > 8:270273/1‑145 CCCCGTACTTTTGTACGGGGCATAATGCAATTATAGATGGGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTATGACCCGCCATCTTCAACCGATTGAGGGTGCTGTCTGCGTTCTCTTTGCCTTTCACCG > 3:15652/1‑149 CGGGGCATAATGCAATTATAGATGGGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTATGACCCGCCATCTTCAACCGATTGAGGGTGCTGTCTGCGTTCTCTTTGCCTTTCACCGGGCCAATGACCACAC < 6:74898/149‑1 GCATAATGCAATTATAGATGGGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTATGACCCGCCATCTTCAACCGATTGAGGGTGCTGTCTGCGTTCTCTTTGCCTTTCACCGGGCCAATGACCACACGATT < 8:246715/149‑1 TTGGCCCGGTGAAAGGCAAAGAGAACGCAGACAGCACCCTCAATCGGTTGAAGATGGCGGGTCATACAAACTGCATTCGGCTCGCCGCCGGGGGTTGAAACCCTCAAAATCCCCCCCATCTATAATTGCATTATGCCCCGTACTTTTGTACGGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4122477‑4122323‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtacggggCATAATGCAATTATAGATGGGGGGGATTTTGAGGGTTTCAACCCCCGGCGGCGAGCCGAATGCAGTTTGTATGACCCGCCATCTTCAACCGATTGAGGGTGCTGTCTGCGTTCTCTTTGCCTTTCACCGGGCCAATGACCACACGATT > NC_000913/4122343‑4122490 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |