| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4372705 | 76 (0.810) | 3 (0.030) | 4/238 | NT | 3.9% | intergenic (+34/‑104) | groL/yjeI | Cpn60 chaperonin GroEL, large subunit of GroESL/DUF4156 family lipoprotein |
| ? | NC_000913 | = 4372719 | 78 (0.880) | intergenic (+48/‑90) | groL/yjeI | Cpn60 chaperonin GroEL, large subunit of GroESL/DUF4156 family lipoprotein | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TGGCTGGCCTGATGATCACCACCGAATGCATGGTTACCGACCTGCCGAAAAACGATGCAGCTGACTTAGGCGCTGCTGGCGGTATGGGCGGCATGGGTGGCATGGGCGGCATGATGTAATTGCCCTGCACCTCGCAGAAATAAACAAACCCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4372553‑4372705‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaacccccAGACATTTCTGCCCGGGGGTTTGTTTATTTCTGCGAGGTGCAGGGCAATTACATCATGCCGCCCATGCCACCCATGCCGCCCATACCGCCAGCAGCGCCTAAGTCAGCTGCATCGTTTTTCGGCAGGTCGGTAACCATGCATTCGGTG < NC_000913/4372719‑4372572 TGGCTGGCCTGATGATCACCACCGAATGCATGGTTACCGACCTGCCGAAAAACGATGCAGCTGACTTAGGCGCTGCTGGCGGTATGGGCGGCATGGGTGGCATGGGCGGCATGATGTAATTGCCCTGCACCTCGCAGAAATAAACAAA < 1:104255/148‑1 GCTGGCCTGATGATCACCACCGAATGCATGGTTACCGACCTGCCGAAAAACGATGCAGCTGACTTAGGCGCTGCTGGCGGTATGGGCGGCATGGGTGGCATGGGCGGCATGATGTAATTGCCCTGCACCTCGCAGAAATAAACAAACCC > 1:178983/1‑149 GCTGGCCTGATGATCACCACCGAATGCATGGTTACCGACCTGCCGAAAAACGATGCAGCTGACTTAGGCGCTGCTGGCGGTATGGGCGGCATGGGTGGCATGGGCGGCATGATGTAATTGCCCTGCACCTCGCAGAAATAAACAAACCC > 6:283885/1‑149 GCCTGATGATCACCACCGAATGCCTGGTTACCGACCTGCCGAAAAACGATGCAGCTGACTTAGGCGCTGCTGGCGGTATGGGCGGCATGGGTGGCAGGGGCGGCATGATGTAATTGCCCTGCACCTCGCAGAAATAAACAAACCCCC < 4:296646/147‑1 GCCTGATGATCACCACCGAATGCATGGTTACCGACCTGCCGAAAAACGATGCAGCTGACTTAGGCGCTGCTGGCGGTATGGGCGGCATGGGTGGCATGGGCGGCATGATGTAATTGCCCTGCACCTCGCAGAAATAAACAAACCCCC < 1:1564/147‑1 GAATGCATGGTTACCGACCTGCCGAAAAACGATGCAGCTGACTTAGGCGCTGCTGGCGGTATGGGCGGCATGGGTGGCATGGGCGGCATGATGTAATTGCCCTGCACCTCGCAGAAATAAACAAACCCC > 1:377503/1‑129 GAATGCATGGTTACCGACCTGCCGAAAAACGATGCAGCTGACTTAGGCGCTGCTGGCGGTATGGGCGGCATGGGTGGCATGGGCGGCATGATGTAATTGCCCTGCACCTCGCAGAAATAAACAAACCCC < 2:377503/129‑1 TGATGTAATTGCCCTGCACCTCGCAGAAATAAACAAACGCCCGGGGAGAAATGTCTGGGGGTGTGTTTATTTCTGCGAGGTGCAGGGCGATTACATCATGCCGCCCATGCCCCCCATGCCGCCCATCCCGCCAGCAGCGCCTAAGTCcg > 3:349731/1‑147 ATTGCCCTGCACCTCGCAGAAATAAACAAACCCCCGGGCAGAAATGTCTGGGGGTTTGTTTATTTCTGCGAGGTGCAGGGCAATTACATCATGCCGCCCATGCCACCCA < 3:105051/109‑1 ATTGCCCTGCACCTCGCAGAAATAAACAAACCCCCGGGCAGAAATGTCTGGGGGTTTGTTTATTTCTGCGAGGTGCAGGGCAATTACATCATGCCGCCCATGCCACCCA > 4:105051/1‑109 acCAAACCCCCGGGCAGAACTGTCTGGGGGTTTGTTTATTTCGGCGAGGTGCAGGGCAATTACATCATGCCGCCCATGCCACCCATGCCGCCCATCCCGCCAGCAGCGCCTAAGTCAGCTGCATCGTTTTTCGGCAGGTCGGTAACCAT < 4:349731/147‑1 AAACCCCCAGACATTTCTGCCCGGGGGTTTGTTTATTTCTGCGAGGTGCAGGGCAATTACATCATGCCGCCCATGCCACCCATGCCGCCCATACCGCCAGCAGCGCCTAAGTCAGCTGCATCGTTTTTCGGCAGGTCGGTAACCATGCA > 8:51860/1‑149 AAACCCCCAGACATTTCTGCCCGGGGGTTTGTTTATTTCTGCGAGGTGCAGGGCAATTACATCATGCCGCCCATGCCACCCATGCCGCCCATACCGCCAGCAGCGCCTAAGTCAGCTGCATCGTTTTTCGGCAGGTCGGTAACCATGCA > 5:283885/1‑149 CCCCCAGACATTTCTGCCCGGGGGTTTGTTTATTTCTGCGAGGTGCAGGGCAATTACATCATGCCGCCCATGCCACCCATGCCGCCCATACCGCCAGCAGCGCCTAAGTCAGCTGCATCGTT < 2:17051/122‑1 CCCCCAGACATTTCTGCCCGGGGGTTTGTTTATTTCTGCGAGGTGCAGGGCAATTACATCATGCCGCCCATGCCACCCATGCCGCCCATACCGCCAGCAGCGCCTAAGTCAGCTGCATCGTT > 1:17051/1‑122 CCCCAGACATTTCTGCCCGGGGGTTTGTTTATTTCTGCGAGGTGCAGGGCAATTACATCATGCCGCCCATGCCACCCATGCCGCCCATACCGCCAGCAGCGCCTAAGTCAGCTGCATCGTTTTTCGGCAGGTCGGTAACCATGCATTCG < 3:323536/149‑1 CCCCAGACATTTCTGCCCGGGGGTTTGTTTATTTCTGCGAGGTGCAGGGCAATTACATCATGCCGCCCATGCCACCCATGCCGCCCATACCGCCAGCAGCGCCTAAGTCAGCTGCATCGTTTTTCGGCAGGTCGGTAACCATGCATTCG > 3:142755/1‑149 CCAGACATTTCTGCCCGGGGGTTTGTTTATTTCTGCGAGGTGCAGGGCAATTACATCATGCCGCCCATGCCACCCATGCCGCCCATACCGCCAGCAGCGCCTAAGTCAGCTGCATCG‑TTTTCGGCAGGTCGGTAACCATGCATTCGGTG > 2:167242/1‑149 TGGCTGGCCTGATGATCACCACCGAATGCATGGTTACCGACCTGCCGAAAAACGATGCAGCTGACTTAGGCGCTGCTGGCGGTATGGGCGGCATGGGTGGCATGGGCGGCATGATGTAATTGCCCTGCACCTCGCAGAAATAAACAAACCCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4372553‑4372705‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaacccccAGACATTTCTGCCCGGGGGTTTGTTTATTTCTGCGAGGTGCAGGGCAATTACATCATGCCGCCCATGCCACCCATGCCGCCCATACCGCCAGCAGCGCCTAAGTCAGCTGCATCGTTTTTCGGCAGGTCGGTAACCATGCATTCGGTG < NC_000913/4372719‑4372572 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |