New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 3625632NA (NA)3 (0.030) 3/242 NT NA noncoding (44/82 nt) RIP260 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site RIP260 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site
?NC_000913 = 3625670 NA (NA)noncoding (82/82 nt) RIP260 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site RIP260 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site

Only 100 of 121 total aligned reads displayed.

TCAGTCCTTGCGGGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTT  >  NC_000913/3625485‑3625779
                                                                                                                                                   |                                                                                                                                                   
tCAGTCCTTGCTCGGAGCCGGCATTCGTAATCTTGCCCTGAATACAGGACAGAGAATCAAAAAGCCGGTTAACTGAAACTCTCCAGGTTTTGGGTGTCAATTCATAACCGCCTTATCAGGCCTAAAAACAACTAAAATTCAATAAATTg                                                                                                                                                    >  4:313484/1‑149 (MQ=255)
tCAGTCCTTGCGGGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTg                                                                                                                                                    >  3:47750‑M1/1‑148 (MQ=255)
tCAGTCCTTGCGGGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTg                                                                                                                                                    >  8:115522‑M1/1‑148 (MQ=255)
    tCCTTGCGGGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTTACTGAAACTGTCCAGGTTTTGGGGGTCAGTTAATAAACTCCTTATCCGGACTAAAAACAACTAAAATTCAATAAATTGCAcc                                                                                                                                                >  2:369854/1‑149 (MQ=255)
     ccTTGC‑GGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGa                                                                                                                                              >  6:267423/1‑149 (MQ=255)
       ttGCGGGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTACAGGTTTTGGGGGTCAGTTCATAAACGCATTATCCGGACTAAATACAACTAAAATTCAATAAATTGCACCGAt                                                                                                                                             >  5:309980/1‑149 (MQ=255)
            gggAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTa                                                                                                                                        <  2:448709/149‑1 (MQ=255)
                   ggCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCta                                                                                                                                 >  4:29888/1‑149 (MQ=255)
                    gCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCtat                                                                                                                                <  3:372131/149‑1 (MQ=255)
                     cTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCtat                                                                                                                                >  2:113111/1‑148 (MQ=255)
                      tttCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCtat                                                                                                                                >  1:192279/1‑147 (MQ=255)
                        tCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCa                                                                                                                                                  >  3:149169/1‑127 (MQ=255)
                        tCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCa                                                                                                                                                  <  4:149169/127‑1 (MQ=255)
                        tCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATaa                                                                                                                              <  8:19075/147‑1 (MQ=255)
                         cGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTAAAAGCt                                                                                                                           >  7:447002/1‑149 (MQ=255)
                           tAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTAATAAACGCCTTATCCTGCCTAAAAACAACTAAAATTCAATAAATTGAACCGATGCGTAGTCCCTATAAGATTa                                                                                                                         >  1:376452/1‑149 (MQ=255)
                             aTCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTAc                                                                                                                        <  3:71652/148‑1 (MQ=255)
                                    ccTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCAGCGGG                                                                                                                <  8:353591‑M2/149‑1 (MQ=255)
                                         aTACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATACACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCaatt                                                                                                           >  5:204300‑M2/1‑145 (MQ=255)
                                         aTACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCaatt                                                                                                           >  2:141876‑M2/1‑145 (MQ=255)
                                         aTACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCaatt                                                                                                           >  3:258138‑M2/1‑145 (MQ=255)
                                         aTACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGGCAGTTCATAAACGCCTTCTCCGGCCTAAAAACAACTAAACTTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCaatt                                                                                                           >  6:11484‑M2/1‑145 (MQ=255)
                                           aCAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGATCAGTTCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTgcccgatgcgtaagcttatagggactacgcatcggtgcaattta                                                                                                         >  8:184873‑M1/1‑105 (MQ=255)
                                            cagtaatgagtatCAAAAAGCCGTTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTgcccgatgcgtaagcttatagggactacgcatcggtgcaattta                                                                                                         <  8:223249‑M1/142‑45 (MQ=255)
                                            cAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTa                                                                                                        >  4:358078/1‑149 (MQ=255)
                                             aGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTAt                                                                                                       >  1:7211/1‑149 (MQ=255)
                                             aGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTAt                                                                                                       >  5:149356/1‑149 (MQ=255)
                                             aGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGATCAGTTCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTgcccgatgcgtaagcttatagggactacgcatcggtgcaatttatt                                                                                                       <  7:184873‑M1/149‑47 (MQ=255)
                                               gACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTAtt                                                                                                      >  3:355650/1‑148 (MQ=255)
                                               gACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTAtt                                                                                                      >  4:281268/1‑148 (MQ=255)
                                                  tGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACg                                                                                                  >  1:353774/1‑149 (MQ=255)
                                                  tGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACg                                                                                                  >  1:175090/1‑149 (MQ=255)
                                                   gAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATT                                                                                                                                                     >  5:87787‑M1/1‑97 (MQ=255)
                                                   gAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATT                                                                                                                                                     <  6:87787‑M1/97‑1 (MQ=255)
                                                    aGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGc                                                                                                 >  7:258224/1‑148 (MQ=255)
                                                     gTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCa                                                                                               <  3:358078/149‑1 (MQ=255)
                                                     gTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCa                                                                                               <  1:113111/149‑1 (MQ=255)
                                                        tCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTg                                                                                            <  4:355650/149‑1 (MQ=255)
                                                          aaaaaGCGGGTTAACTGAAACTGGCCAGGTTTTGGGGGTCAGTTCATAAACTCCTGATCCGGACTAAACACAACTAAAATTCAATAAATTGCACCGCTGCTTAGTACCTATAATCTTACGCATCGGGCAATTGTATTTACGCCATTGt                                                                                           <  6:309980/148‑1 (MQ=255)
                                                          aaaaaGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTc                                                                                          <  4:387540/149‑1 (MQ=255)
                                                           aaaaGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTcc                                                                                         >  4:189941/1‑149 (MQ=255)
                                                            aaaGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTccc                                                                                        <  2:7211/149‑1 (MQ=255)
                                                                        cTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCt                                                                            <  4:69524/149‑1 (MQ=255)
                                                                           aaaCTGTCCAGGTTTTGGGGGTCAGTTCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGc                                                                                                 <  6:247187/125‑1 (MQ=255)
                                                                           aaaCTGTCCAGGTTTTGGGGGTCAGTTCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGc                                                                                                 >  5:247187/1‑125 (MQ=255)
                                                                            aaCTGTCCAGGTTTTGGGGGTCAGTTCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAAt                                                                        >  7:133813/1‑149 (MQ=255)
                                                                             aCTGTCCAGGTTTTGGGGGTCAGTTCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATc                                                                       <  1:101329/149‑1 (MQ=255)
                                                                               tGTCCAGGTTTTGGGGGTCAGTTCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCa                                                                                               >  2:101937/1‑123 (MQ=255)
                                                                               tGTCCAGGTTTTGGGGGTCAGTTCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCa                                                                                               <  1:101937/123‑1 (MQ=255)
                                                                               tGTCCAGGTTTTGGGGGTCAGTTCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAAt                                                                                     >  6:5796/1‑133 (MQ=255)
                                                                               tGTCCAGGTTTTGGGGGTCAGTTCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAAt                                                                                     <  5:5796/133‑1 (MQ=255)
                                                                                gTCCAGGTTTTGGGGGTCAGTTCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATaa                                                                                                                              <  3:69268/91‑1 (MQ=255)
                                                                                 tCCAGGTTTTGGGGGTCAGTTCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCgcag                                                                   <  3:29888/149‑1 (MQ=255)
                                                                                 tCCAGGTTTTGGGGGTCAGTTCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCgca                                                                    <  4:47750/148‑1 (MQ=255)
                                                                                 tCCAGGTTTTGGGGGTCAGTTCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCgca                                                                    <  7:115522/148‑1 (MQ=255)
                                                                                   cAGGTTTTGGGGGTCAGTTCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTc                                                                              >  6:438383/1‑136 (MQ=255)
                                                                                   cAGGTTTTGGGGGTCAGTTCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTc                                                                              <  5:438383/136‑1 (MQ=255)
                                                                                    aGGTTTTGGGGGTCAGTTCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATc                                                                       <  7:376230/142‑1 (MQ=255)
                                                                                    aGGTTTTGGGGGTCAGTTCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGcagcag                                                                >  8:302875/1‑149 (MQ=255)
                                                                                     ggTTTTTGGGGTCAGTTCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCagcagc                                                               <  3:313484/149‑1 (MQ=255)
                                                                                     ggTTTTGGGGGTCAGTTCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCagcagc                                                               <  8:133813/149‑1 (MQ=255)
                                                                                     ggTTTTGGGGGTCAGGTCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCagcagc                                                               <  8:273337/149‑1 (MQ=255)
                                                                                               gTCAGTTCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTg                                                      >  5:308764/1‑148 (MQ=255)
                                                                                                taaGTTCATAAACGCCTTATCCGGCCTAAAACCAACTAAAATTCAATAATTTGCACCGATGCGTAGTCCCTATAAGCTTCCGCATCGTGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGaa                                                    <  1:369854/147‑1 (MQ=255)
                                                                                                    ttCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAAt                                                >  1:246161/1‑149 (MQ=255)
                                                                                                    ttCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAAt                                                >  2:215701/1‑149 (MQ=255)
                                                                                                      cATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGTGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTa                                                                                                        <  7:282962/91‑1 (MQ=255)
                                                                                                      cATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGTGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTa                                                                                                        >  8:282962/1‑91 (MQ=255)
                                                                                                       aTAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATgcg                                             >  4:141063/1‑149 (MQ=255)
                                                                                                         aaaCGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTc                                                                                 <  4:161068/111‑1 (MQ=255)
                                                                                                         aaaCGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTc                                                                                 >  3:161068/1‑111 (MQ=255)
                                                                                                           aCGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATGcgccgc                                         >  4:289836/1‑149 (MQ=255)
                                                                                                               cTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAAt                                     >  3:40093/1‑149 (MQ=255)
                                                                                                                  aTCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCACTCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAAtt                                    <  2:22613/147‑1 (MQ=255)
                                                                                                                  aTCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAATTg                                   <  7:149249/148‑1 (MQ=255)
                                                                                                                  aTCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAATTGc                                  >  5:55598/1‑149 (MQ=255)
                                                                                                                   tCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTcc                                                                             <  4:297443/105‑1 (MQ=255)
                                                                                                                     cGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCt                                                                            >  3:120414/1‑104 (MQ=255)
                                                                                                                     cGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAATTGCCa                                <  7:302875/148‑1 (MQ=255)
                                                                                                                      ggCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCg                                                                      <  3:70637/109‑1 (MQ=255)
                                                                                                                      ggCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCg                                                                      >  4:70637/1‑109 (MQ=255)
                                                                                                                         cTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAAtt                                    >  6:370108/1‑140 (MQ=255)
                                                                                                                            aaaaCAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAATTGCCATCAGCGt                         <  5:267423/148‑1 (MQ=255)
                                                                                                                            aaaaCAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAATTGCCATCAGCGTc                        <  6:55598/149‑1 (MQ=255)
                                                                                                                             aaaCAACTAAAATTCAATAAATTGCACCGATGCTTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAATTGCCATCAGCGTCa                       <  5:76529/149‑1 (MQ=255)
                                                                                                                             aaaCAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATTGTGAAAAATGCGCCGCCAATTGCCATCAGCGTCa                       <  4:40093/149‑1 (MQ=255)
                                                                                                                                  acTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAAc                  >  6:427321/1‑149 (MQ=255)
                                                                                                                                    tAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTg                >  3:285304/1‑149 (MQ=255)
                                                                                                                                        aTTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGc            <  3:289836/149‑1 (MQ=255)
                                                                                                                                          tCACTAAATTCCCCCCACCCGCAGGCCCTCTCAGCTAACGCATCGGGCAATTGTATTTACGCCATTCTCCCAATCGTCTTCCTGACTCGCAGCAGCGCAATGCTGAAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCa          <  2:353774/149‑1 (MQ=255)
                                                                                                                                            aaTAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCaatttattgaattttagttgtttttaggccggataaggcgtttatgaactgatccccaaaacctggacagtttcagttaaccggctttttgatactcagtcct        <  7:184873‑M2/149‑104 (MQ=255)
                                                                                                                                            aaTAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGa        >  7:417281/1‑149 (MQ=255)
                                                                                                                                            aaTAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGa        >  3:208680/1‑149 (MQ=255)
                                                                                                                                              tAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCaatttattgaattttagttgtttttaggccggataaggcgtttatgaactgatccccaaaacctggacagtttcagttaaccggctttttgatactcagtcctgt      >  8:184873‑M2/1‑44 (MQ=255)
                                                                                                                                              tAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCaatttattgaattttagttgtttttaggccggataaggcgtttatgaactgacccccaaaacctggacagtttcagttaaacggctttttgatactcattactg       <  8:223249‑M2/148‑105 (MQ=255)
                                                                                                                                                aaTTgcccgatgcgtaagcttatagggactacgcatcggtgcaatttattgaattttagttgtttttaggccggataaggcgtttatgaactgacccccaaaacctggacagtttcagttaaccggctttttgatactcagtcctgtat    >  2:141876‑M1/1‑4 (MQ=255)
                                                                                                                                                aaTTgcccgatgcgtaagcttatagggactacgcatcggtgcaatttattgaattttagttgtttttaggccggataaggcgtttatgaactgacccccaaaacctggacagtttcagttaaccggctttttgatactcagtcctgtat    >  3:258138‑M1/1‑4 (MQ=255)
                                                                                                                                                aaTTgcccgatgcgtaagcttatagggactacgcatcggtgcaatttattgaattttagttgtttttaggccggataaggcgtgtatgaactgacccccaaaacctggacagtttcagttaaccggctttttgatactcagtcctgtat    >  5:204300‑M1/1‑4 (MQ=255)
                                                                                                                                                aaTTgcccgatgcgtaagcttatagggactacgcatcggtgcaatttattgaagtttagttgtttttaggccggagaaggcgtttatgaactgccccccaaaacctggacagtttcagttaaccggctttttgatactcagtcctgtat    >  6:11484‑M1/1‑4 (MQ=255)
                                                                                                                                                  ttGCACCGATGCGTAGTCCCTATAAGCTTACGCTTCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGAttt  <  2:175090/149‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                                   
TCAGTCCTTGCGGGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGCCAGACGATTT  >  NC_000913/3625485‑3625779

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.