| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4576863 = | 130 (1.210) | 4 (0.040) | 4/240 | NT | 3.4% | intergenic (+8/+49) | yjiV/mcrC | pseudogene; conserved hypothetical protein/5‑methylcytosine‑specific restriction enzyme McrBC, subunit McrC |
| ? | NC_000913 | 4576890 = | 109 (1.100) | intergenic (+35/+22) | yjiV/mcrC | pseudogene; conserved hypothetical protein/5‑methylcytosine‑specific restriction enzyme McrBC, subunit McrC | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TTATAAAATTAATGGCTTCGATATTGGCTTGTGTACCGTCAATTTAGGTCAGGAATGGCCGTGTATACATCAAGAATTACTCGACATTTTCGATGAATATCTCAAATAAGCGGTAAGTTTTATAGAAAATACCGCTCCCGACACCACATCGGGAGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4577020‑4576863‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgggagcggTATTTTCTATAAAACTTACCGCTTATTTGAGATATTCATCGAAAATGTCGAGTAATTCTTGATGTATACACGGCCATTCCTGACCTAAATTGACGGTACACAAGCCAATATCGAAGCCATTAATTTTATAACGATGTTTCACTGCGG > NC_000913/4576890‑4577036 TTATAAAATTAATGGCTTCGATATTGGCTTGTGTACCGTCAATTTAGGTCAGGAATGGCCGTGTATACATCAAGAATTACTCGACATTTTCGATGAATATCTCAAATAAGCGGTAAGTTTTATAGAAAATACCGCTCCCGACACCACAT > 2:27926/1‑149 TAAAATTAATGGCTTCGATATTGGCTTGTGTACCGTCAATTTAGGTCAGTAATGGCCGTGTATACATCAAGAATTACTCGACATTTTCGATGAATATCTCAAATAAGAGGTAATTTTTATTGAAATTACCGCTCCCGAGACCACATCGG < 8:100402/149‑1 AATGGCTTCGATATTGGCTTGTGTACCGTCAATTTAGGTCAGGAATGGCCGTGTATACATCAAGAATTACTCGACATTTTCGATGAATATCTCAAATAAGCGGTAAGTTTTATAGAAAATACCGCTCCCGACACCACATCGGGAGCGG < 1:96175/148‑1 AATTTAGGTCAGGAATGGCCGTGTATACATCAAGAATTACTCGACATTTTCGATGAATATCTCAAATAAGCGGTAAGTTTTATAGAAAATACCGCTCCCGATGTGGTGTCGGGAGCGGTATTTTCTATAAAACTTACCGCTTATTTGAG < 4:234380/149‑1 TGGCCGTGTATACATCAAGAATTACTCGACATTTTCGATGAATATCTCAAATAAGCGGTAAGTTTTATAGAAAATACCGCTCCCGATGTGGTGTCGGGAGCGGTATTTTCTATAAAACTTACTGCTTATTTGAGATATTCATCGAAAAT < 5:424819/149‑1 GAATTACTCGACATTTTCGATGAATATCTCAAATAAGCGGTAAGTTTTATAGAAAATACCGCTCCCGATGTGGTGTCGGGAGCGGTATTTTCTATAAAACTTACCGCTTATTTGAGATATTCATCGAAAATGTCGAGTAATTCTTGAgg > 2:314919/1‑147 ATAGAAAATACCGCTCCCGACACCACATCGGGAGCGGTATTTTCTATAAAACTTACCGCTTATTTGAGATATTCATCGAAAATGTCGAGTAATTCTTGATGTATACACGGCCATTCCTGACCTAAATTGACGGTACACAAGCCAATAT < 6:424819/148‑1 CACATCGGGAGCGGTATTTTCTATAAAACTTACCGCTTATTTGAGATATTCATCGAAAATGTCGAGTAATTCTTGATGTATACACGGCCATTCCTGACCTAAATTGACGGTACACAAGCCAATATCGAAGCCATTAATTTTATAACGAT < 3:234380/149‑1 TCGGGAGCGGTATTTTCTATAAAACTTACCGCTTATTTGAGATATTCATCGAAAATGTCGAGTAATTCTTGATGTATACACGGCCATTCCTGACCTAAATTGACGGTACACAAGCCAATATCGAAGCCATTAATTTTATAACGATGTTT > 1:421488/1‑149 GGTATTTTCTATAAAACTTACCGCTTATTTGAGATATTCATCGAAAATGTCGAGTAATTCTTGATGTATACACGGCCATTCCTGACCTAAATTGACGGTACACAAGCCAATATCGAAGCCATTAATTTTATAACGATGTTTCACTGCGG < 1:30678/149‑1 GGTATTTTCTATAAAACTTACCGCTTATTTGAGATATTCATCGAAAATGTCGAGTAATTCTTGATGTATACACGGCCATTCCTGACCTAAATTGACGGTACACAAGCCAATATCGAAGCCATTAATTTTATAACGATGTTTCACTGCGG > 6:154345/1‑149 GTATTTTCTATAAAACTTACCGCTTATTTGAGATATTCATCGAAAATGTCGAGTAATTCTTGATGTATACACGGCCATTCCTGACCTAAATTGACGGTACACAAGCCAATATCGAAGCCATTAATTTTATAA < 3:271602/132‑1 GTATTTTCTATAAAACTTACCGCTTATTTGAGATATTCATCGAAAATGTCGAGTAATTCTTGATGTATACACGGCCATTCCTGACCTAAATTGACGGTACACAAGCCAATATCGAAGCCATTAATTTTATAA > 4:271602/1‑132 TTATAAAATTAATGGCTTCGATATTGGCTTGTGTACCGTCAATTTAGGTCAGGAATGGCCGTGTATACATCAAGAATTACTCGACATTTTCGATGAATATCTCAAATAAGCGGTAAGTTTTATAGAAAATACCGCTCCCGACACCACATCGGGAGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4577020‑4576863‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgggagcggTATTTTCTATAAAACTTACCGCTTATTTGAGATATTCATCGAAAATGTCGAGTAATTCTTGATGTATACACGGCCATTCCTGACCTAAATTGACGGTACACAAGCCAATATCGAAGCCATTAATTTTATAACGATGTTTCACTGCGG > NC_000913/4576890‑4577036 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |