New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 1727769 =84 (0.780)7 (0.070) 5/246 NT 8.3% intergenic (+13/‑68) nemA/gloA chromate reductase, quinone reductase, FMN‑linked; N‑Ethylmaleimide reductase; old yellow enzyme/glyoxalase I, Ni‑dependent
?NC_000913 1727789 = 76 (0.750)intergenic (+33/‑48) nemA/gloA chromate reductase, quinone reductase, FMN‑linked; N‑Ethylmaleimide reductase; old yellow enzyme/glyoxalase I, Ni‑dependent

Only 100 of 106 total aligned reads displayed.

TTGCGAACCCGGATCTGGTCGCCCGCTTGCAGCGCAAAGCTGAGCTTAACCCACAGCGTGCCGAAAGTTTCTACGGTGGCGGCGCGGAAGGCTATACCGATTACCCGACGTTGTAATCCAACATTGCGAGCGGCGTAAAGCCGCCGCTATACTAAAACAACATTTTGAATCTGTTAGCCATTTTGAGGATAAAAAGATGCGTCTTCTTCATACCATGCTGCGCGTTGGCGATTTGCAACGCTCCATCGATTTTTATACCAAAGTGCTGGGCATGAAACTGCTGCGTACCAGCGAAAA  >  NC_000913/1727641‑1727937
                                                                                                                                                    |                                                                                                                                                    
ttGCGAACCCGGATCTGGTCGCCCGCTTGCAGCGCAAAGCTGAGCTTAACCCCCAGCGTGCCGAAAGTTTCTACGGTGGCGGCGCGGAAGGCTATACCGATTACCCGACGTTGTAATCCAACATTGCGAGCGGCGTAAAGCCGCCGCta                                                                                                                                                      >  5:261651/1‑149 (MQ=255)
   cGAACCCGGATCTGGTCGCCCGCTTGCAGCGCAAAGCTGAGCTTAACCCACAGCGTGCCGAAAGTTTCTACGGTGGCGGCGCGGAAGGCTATACCGATTACCCGACGTTGTAATCCAACATTGCGAGCGGCGTAAAGCCGCCGCta                                                                                                                                                      <  3:278266/146‑1 (MQ=255)
   cGAACCCGGATCTGGTCGCCCGCTTGCAGCGCAAAGCTGAGCTTAACCCACAGCGTGCCGAAAGTTTCTACGGTGGCGGCGCGGAAGGCTATACCGATTACCCGACGTTGTAATCCAACATTGCGAGCGGCGTAAAGCCGCCGCTATAc                                                                                                                                                   >  3:435108/1‑149 (MQ=255)
   cGAACCCGGATCTGGTCGCCCGCTTGCAGCGCAAAGCTGAGCTTAACCCACAGCGTGCCGAAAGTTTCTACGGTGGCGGCGCGGAAGGCTATACCGATTACCCGACGTTGTAATCCAACATTGCGAGCGGCGTAAAGCCGCCGCTATAc                                                                                                                                                   >  7:392669/1‑149 (MQ=255)
   atgcccagcactttggtataaaaatcgatggagcgttgcaaatcgccaacgcgcagcatggtatgaagaagacgcatctttttatcctcaaaatggctaacagattcaaaatgttgttttagtatAGCGGCGTAAAGCCGCCGCTATAc                                                                                                                                                   >  1:119966‑M1/126‑149 (MQ=255)
    gAACCCGGATCTGGTCGCCCGCTTGCAGCGCAAAGCTGAGCTTAACCCACAGCGTGCCGAAAGTTTCTACGGTGGCGGCGCGGAAGGCTATACCGATTACCCGACGTTGTAATCCAACATTGCGAGCGGCGTAAAGCCGCCGCTATAc                                                                                                                                                   >  4:60434/1‑148 (MQ=255)
         cGGATCTGGTCGCCCGCTTGCAGCGCAAAGCTGAGCTTAACCCACAGCGTGCCGAAAGTTTCTACGGTGGCGGCGCGGAAGGCTATACCGATTACCCGACGTTGTAATCCAACATTGCGAGCGGCGTAAAGCCGCCGCTATACTaaaa                                                                                                                                              >  7:98298/1‑148 (MQ=255)
           gATCTGGTCGCCCGCTTGCAGCGCAAAGCTGAGCTTAACCCACAGCTTGCAGAAAGATTCTACGGTGGAGGCGCGGAAGGCTATACCGATTACCCGACGTTGTAATACAACATTGCGAGCGGAGTACAGCCGCCGCTATACAAAaaca                                                                                                                                            >  8:301377/1‑148 (MQ=255)
                ggTCGCCCGCTTGCAGCGCAAAGCTGAGCTTAACCCACAGCGTGCCGAAAGTTTCTACGGTGGCGGCGCGGAAGGCTATACCGATTACCCGACGTTGTAATCCAACATTGCGAGCGGCGTAAAGCCACCGCTATACTAAAACATCAttt                                                                                                                                      >  3:454531/1‑149 (MQ=255)
                 gTCGCCCGCTTGCAGCGCAAAGCTGAGCTTAACCCACAGCGTGCCGAAAGTTTCTACGGTGGCGGCGCGGAAGGCTATACCGATTACCCGACGTTGTAATCCAACATTGCGAGCGTCGTAAAGCCACCGCTATACTAAAACAACAtttt                                                                                                                                     <  4:454531/149‑1 (MQ=255)
                 gTCGCCCGCTTGCAGCGCAAAGCTGAGCTTAACCCACAGCGTGCCGAAAGTTTCTACGGTGGCGGCGCGGAAGGCTATACCGATTACCCGACGTTGTAATCCAACATTGCGAGCGGCGTAAAGCCGCCGCTATACTAAAACAACAtttt                                                                                                                                     <  6:98970/149‑1 (MQ=255)
                 gTCGCCCGCTTGCAGCGCAAAGCTGAGCTTAACCCACAGCGTGCCGAAAGTTTCTACGGGGGCGGCGCGGAAGGCTATACCGATTACCCGACGTTGTAATCCAACATTGCGAGCGGCGTAAAGCCGCCGCTATACTAAAacaaca                                                                                                                                         <  6:261651/145‑1 (MQ=255)
                   cGCCCGCTTGCAGCGCAAAGCTGAGCTTAACCCACAGCGTGCCGAAAGTTTCTACGGTGGCGGCGCGGAAGGCTATACCGATTACCCGACGTTGTAATCCAACATTGCGAGCGGCGTAAAGCCGCCGCTATACTAAAACAACATTTTGa                                                                                                                                   <  8:392669/149‑1 (MQ=255)
                                cgcAAAGCTGAGCTTAACCCACAGCGTGCCGAAAGTTTCTACGGTGGCGGCGCGGAAGGCTATACCGATTACCCGACGTTGTAATCCAACATTGCGAGCGGCGTAAAGCCGCCGCTATACTAAAACAACATTTTGAATCTGTTAGCCAt                                                                                                                      <  3:169552/149‑1 (MQ=255)
                                 gcAAAGCTGAGCTTAACCCACAGCGTGCCGAAAGTTTCTACGGTGGCGGCGCGGAAGGCTATACCGATTACCCGACGTTGTAATCCAACATTGCGAGCGGCGTAAAGCCGCCGCTATACTAAAACAACATTTTGAATCTGTTAGCCAtt                                                                                                                     >  7:308638/1‑149 (MQ=255)
                                     gttgcaaatcgccaacgcgcagcatggtatgaagaagacgcatctttttatcctcaaaatggctaacagattcaaaatgttgttttagtatAGCGGCGGCTTTACGCCGCTATACTAAAACAACATTTTGAATCTGTTa                                                                                                                           <  1:152295‑M1/48‑1 (MQ=255)
                                     gttgcaaatcgccaacgcgcagcatggtatgaagaagacgcatctttttatcctcaaaatggctaacagattcaaaatgttgttttagtatAGCGGCGGCTTTACGCCGCTATACTAAAACAACATTTTGAATCTGTTa                                                                                                                           >  2:152295‑M1/92‑139 (MQ=255)
                                     gttgcaaatcgccaacgcgcagcatggtatgaagaagacgcatctttttatcctcaaaatggctaacagattcaaaatgttgttttagtatAGCGGCGGCTTTACGCCGCTATACTAAAACAACATTTTGAATCTGTTa                                                                                                                           >  2:158942‑M1/92‑139 (MQ=255)
                                     gttgcaaatcgccaacgcgcagcatggtatgaagaagacgcatctttttatcctcaaaatggctaacagattcaaaatgttgttttagtatAGCGGCGGCTTTACGCCGCTATACTAAAACAACATTTTGAATCTGTTa                                                                                                                           <  1:158942‑M1/48‑1 (MQ=255)
                                      gCTGAGCTTAACCCACAGCGTGCCGAAAGTTTCTACGGTGGCGGCGCGGAAGGCTATACCGATTACCCGACGTTGTAATCCAACATTGCGAGCGGCGTAAAGCCGCCGCTATACTAAAACAACATTTTGAATCTGTTCGCCATTTTGAg                                                                                                                >  6:320501/1‑149 (MQ=255)
                                       cTGAGCTTAACCCACAGCGTGCCGAAAGTTTCTACGGTGGCGGCGCGGAAGGCTATACCGATTACCCGACGTTGTAATCCAACATTGCGAGCGGCGTAAAGCCGCCGCTATACTAAAACAACATTTTGAATCTGTTAGCCATTTTGAgg                                                                                                               <  6:486614/149‑1 (MQ=255)
                                         gAGCTTAACCCACAGCGTGCCGAAAGTTTCTACGGTGGCGGCGCGGAAGGCTATACCGATTACCCGACGTTGTAATCCAACATTGCGAGCGGCGTAAAGCCGCCGCTATACTAAAACAACATTTTGAATCTGTTAGCCATTTTGAGGa                                                                                                              >  5:91396/1‑148 (MQ=255)
                                          aGCTTAACCCACAGCGTGCCGAAAGTTTCTACGGTGGCGGCGCGGAAGGCTATACCGATTACCCGACGTTGTAATCCAACATTGCGAGCGGCGTAAAGCCGCCGCTATACTAAAACAACATTTTGAATCTGTTAGCCATTTTGAGGATa                                                                                                            <  2:328840/149‑1 (MQ=255)
                                                 cccACAGCGTGCCGAAAGTTTCTACGGTGGCGGCGCGGAAGGCTATACCGATTACCCGACGTTGTAATCCAACATTGCGAGCGGCGTAAAGCCGCCGCTATACTAAAACAACATTTTGAATCTGTTAGCCATTTTGAGGATAAAAAGAt                                                                                                     <  4:389078/149‑1 (MQ=255)
                                                 cccACAGCGTGCCGAAAGTTTCTACGGTGGCGGCGCGGAAGGCTATACCGATTACCCGACGTTGTAATCCAACATTGCGAGCGGCGTAAAGCCGCCGCTATACTAAAACAACATTTTGAATCTGTTAGCCATTTTGAGGATAAAAAGAt                                                                                                     <  5:440099/149‑1 (MQ=255)
                                                 cccACAGCGTGCCGAAAGTTTCTACGGTGGCGGCGCGGAAGGCTATACCGATTACCCGACGATGTAATCCAACATTGCGAGCGGCGTAAAGCCGCCGCTATACTAAAACAACATTTTGAATCTGTTAGCCATTTTGAGGATAAAAAGAt                                                                                                     <  6:290856/149‑1 (MQ=255)
                                                  ccACAGCGTGCCGAAAGTTTCTACGGTGGCGGCGCGGAAGGCTATACCGATTACCCGACGTTGTAATCCAACATTGCGAGCGGCGTAAAGCCGCCGCTATACTAAAACAACAttt                                                                                                                                      <  5:306201/115‑1 (MQ=255)
                                                  ccACAGCGTGCCGAAAGTTTCTACGGTGGCGGCGCGGAAGGCTATACCGATTACCCGACGTTGTAATCCAACATTGCGAGCGGCGTAAAGCCGCCGCTATACTAAAACAACAttt                                                                                                                                      >  6:306201/1‑115 (MQ=255)
                                                  ccACAGCGTGCCGAAAGTTTCTACGGTGGCGGCGCGGAAGGCTATACCGATTACCCGACGTTGTAATCCAACATTGCGAGCGGCGTAAAGCCGCCGCTATACTAAAACAACATTTTGAATCTGTTAGCCATTTTGAGGATAAAAAGATg                                                                                                    >  3:386213/1‑149 (MQ=255)
                                                    acaGCGTGCCGAAAGTTTCTACGGTGGCGGCGCGGAAGGCTATACCGATTACCCGACGTTGTAATCCAACATTGCGAGCGGCGTAAAGCCGCCGCTATACTAAAacaaca                                                                                                                                         <  6:35218/110‑1 (MQ=255)
                                                    acaGCGTGCCGAAAGTTTCTACGGTGGCGGCGCGGAAGGCTATACCGATTACCCGACGTTGTAATCCAACATTGCGAGCGGCGTAAAGCCGCCGCTATACTAAAacaaca                                                                                                                                         >  5:35218/1‑110 (MQ=255)
                                                     caGCGTGCCGAAAGTTTCTACGGTGGCGGCGCGGAAGGCTATACCGATTACCCGACGTTGTAATCCAACATTGCGAGCGGCGTAAAGCCGCCGCTATACTAAAACAACATTTTGAATCTGTTAGCCATTTTGAGGATAAAAAGATGCGt                                                                                                 >  4:328474/1‑149 (MQ=255)
                                                      aGCGGGCCGAACGTTTCTACGGTGGCGGCGCGGCAGGCTATCCCGATTACCCGACGGTGTCATCCAACCTTGCGAGCGGCGTAAAGCCGCCGCTATACTAAAACAACATTTTGAATCTGTTAGCCATTTTGAGGATAAAAAGATGCGtc                                                                                                <  4:381839/149‑1 (MQ=255)
                                                         gagCCGAAAGTTTCTACGCTGGCGGCGCGGAAGGCTAAACCCATTACCCGACGTTGTAAACCAACATTGCGAGCGGCGTAAAGCCGCCGCTATACTAAAACAACATTTTGAATCTGTTAGCCATTTTGAGGATAAAAAGATGCGtcta                                                                                              >  4:187394/3‑147 (MQ=255)
                                                             cGAAAGTTTCTACGGTGGCGGCGCGGAAGGCTATACCGATTACCCGACGTTGTAATCCAACATTGCGAGCGGCGTAAAGCCGCCGCTATACTAAAACAACATTTTGAATCTGTTAGCCATTTTGAg                                                                                                                >  2:454294/1‑126 (MQ=255)
                                                             cGAAAGTTTCTACGGTGGCGGCGCGGAAGGCTATACCGATTACCCGACGTTGTAATCCAACATTGCGAGCGGCGTAAAGCCGCCGCTATACTAAAACAACATTTTGAATCTGTTAGCCATTTTGAg                                                                                                                <  1:454294/126‑1 (MQ=255)
                                                              gAAAGTTTCTACGGTGGCGGCGCGGAAGGCTATACCGATTACCCGACGTTGTAATCCAACATTGCGAGCGGCGTAAAGCCGCCGCTATACTAAAacaaca                                                                                                                                         >  1:442253/1‑100 (MQ=255)
                                                              gAAAGTTTCTACGGTGGCGGCGCGGAAGGCTATACCGATTACCCGACGTTGTAATCCAACATTGCGAGCGGCGTAAAGCCGCCGCTATACTAAAacaaca                                                                                                                                         <  2:442253/100‑1 (MQ=255)
                                                              gAAAGTTTCTACGGTGGCGGCGCGGAAGGCTATACCGATTACCCGACGTTGTAATCCAACATTGCGAGCGGCGTAAAGCCGCCGCTATACTAAAACAACATTTTGAATCTGTTAGCCATTTTGAGGATAAAAAGATGCGTCTTCTTCa                                                                                         >  7:451879/1‑148 (MQ=255)
                                                              gAAAGTTTCTACGGTGGCGGCGCGGAAGGCTATACCGATTACCCGACGTTGTAATCCAACATTGCGAGCGGCGTAAAGCCGCCGCTATACTAAAACAACATTTTGAATCTGTTAGCCATTTTGAGGATAAAAAGATGCGTCTTCTTCa                                                                                         >  6:39475/1‑148 (MQ=255)
                                                              gAAAGTTTCTACGGTGGCGGCGCGGAAGGCTATACCGATTACCCGACGTTGTAATCCAACATTGCGAGCGGCGTAAAGCCGCCGCTATACTAAAACAACATTTTGAATCTGTTAGCCATTTTGAGGATAAAAAGATGCGTCTTCTTCa                                                                                         >  4:418445/1‑148 (MQ=255)
                                                              gAAAGTTTCTACGGTGGCGGCGCGGAAGGCTATACCGATTACCCGACGTTGTAATCCAACATTGCGAGCGGCGTAAAGCCGCCGCTATACTAAAACAACATTTTGAATCTGTTAGCCATTTTGAGGATAAAAAGATGCGTCTTCTTCa                                                                                         >  1:14944/1‑148 (MQ=255)
                                                              gAAAGTTTCTACGGTGGCGGCGCGGAAGGCTATACCGATTACCCGACGTTGTAATCCAACATTGCGAGCGGCGTAAAGCCGCCGCTATACTAAAACAACATTTTGAATCTGTTAGCCATTTTGAGGATAAAAAGATGCGTCTTCTTCa                                                                                         >  8:344764/1‑148 (MQ=255)
                                                              gAAAGTTTCTACGGTGGCGGCGCGGAAGGCTATACCGATTACCCGACGTTGTAATCCAACATTGCGAGCGGCGTAAAGCCGCCGCTATACTAAAACAACATTTTGAATCTGTTAGCCATTTTGAGGATAAAAAGATGCGTCTTCTTCAt                                                                                        <  3:60434/149‑1 (MQ=255)
                                                               aaaGTTTCTACGGTGGCGGCGCGGAAGGCTATACCGATTACCCGACGTTGTAATCCAACATTGCGAGCGGCGTAAAGCCGCCGCTATACTAAAACAACATTTTGAATCTGTTAGCCATTTTGAGGATAAAAAGAt                                                                                                     <  6:456422/135‑1 (MQ=255)
                                                               aaaGTTTCTACGGTGGCGGCGCGGAAGGCTATACCGATTACCCGACGTTGTAATCCAACATTGCGAGCGGCGTAAAGCCGCCGCTATACTAAAACAACATTTTGAATCTGTTAGCCATTTTGAGGATAAAAAGATGCGTCTTCTTCATa                                                                                       >  4:14706/1‑149 (MQ=255)
                                                                      cTACGGTGGCGGCGCGGAAGGCTATACCGATTACCCGACGTTGTAATCCAACATTGCGAGCGGCGTAAAGCCGCCGCTATACTAAAACAACATTTTGAATCTGTTAGCCATTTTGAGGATAAAAAGATGCGTCTTCTTCATACCAtgct                                                                                >  2:313118/1‑149 (MQ=255)
                                                                          ggTGGCGGCGCGGAAGGCTATACCGATTACCCGACGTTGTAATCCAACATTGCGAGCGGCGTAAAGCCGCCGCTATACTAAAACAACATTTTGAATCTGTTAGCCATTTTGAGGATAAAAAGATGCGTCTTCTTCATACCATGCTgcgc                                                                            <  8:451879/149‑1 (MQ=255)
                                                                           gTGGCGGCGCGGAAGGCTATACCGATTACCCGACGTTGTAATCCCACATTGCGAGCGGCGTAAAGCCGCCGCTATACTAAAACAACATTTTGAATCTGTTAGCCATTTTGAGGATAAAAAGATGCGTCTTCTTCATACCATTCTGcgcg                                                                           >  8:447697/1‑149 (MQ=255)
                                                                              gcggcgCGGAAGGCTATACCGATTACCCGACGTTGTAATCCAACATTGCGAGCGGCGTAAAGCCGCCGCTATACTAAAACAACATTTTGAATCTGTTAGCCATTTTGAGGATAAAAAGATGCGTCTTCTTCATACCATGCTGCGCGTTg                                                                        >  5:209685/1‑149 (MQ=255)
                                                                                   gcgGAAGGCTATACCGATTACCCGACGTTGTAATCCAACATTGCGAGCGGCGTAAAGCCGCCGCTATACTAAAACAACATTTTGAATCTGTTAGCCATTTTGAGGATAAAAAGATGCGTCTTCTTCATACCATGCTGCGCGTTGGCGAt                                                                   <  8:308638/149‑1 (MQ=255)
                                                                                     ggAAGGCTATACCGATTACCCGACGTTGTAATCCAACATTGCGAGCGGCGTAAAGCCGCCGCTATACTAAAACAACATTTTGAATCTGTTAGCCATTTTGAGGATAAAAAGATGCGTCTTCTTCATACCATGCTGCGCGTTGGCGAttt                                                                 <  3:328474/149‑1 (MQ=255)
                                                                                      gAAGGCTATACCGATTACCCGACGTTGTAATCCAACATTGCGAGCGGCGTAAAGCCGCCGCTATACTAAAACAACATTTTGAATCTGTTAGCCATTTTGAGGATAAAAAGATGCGTCTTCTTCATACCATGCTGCGCGTTGGCGATTTg                                                                <  4:386213/149‑1 (MQ=255)
                                                                                       aaGGCTATACCGATTACCCGACGTTGTAATCCAACATTGTGAGCGGCGTAAAGCCGCCGCTATACTAAAACAACATTTTGAATCTGTTAGCCATTTTGAGGATAAAAAGATGCGTCTTCTTCATACCATGCTGCGCGTTGGCGAt                                                                   <  2:340752/145‑1 (MQ=255)
                                                                                       aaGGCTATACCGATTACCCGACGTTGTAATCCAACATTGTGAGCGGCGTAAAGCCGCCGCTATACTAAAACAACATTTTGAATCTGTTAGCCATTTTGAGGATAAAAAGATGCGTCTTCTTCATACCATGCTGCGCGTTGGCGAt                                                                   >  1:340752/1‑145 (MQ=255)
                                                                                            tataCCGATTACCCGACGTTGTAATCCAACATTGCGAGCGGCGTAAAGCCGCCGCTATACTAAAACAACATTTTGAATCTGTTAGCCATTTTGAGGATAAAAAGATGCGTCTTCTTCATACCATGCTGCGCGTTGGCGATTTGCAACGc                                                          >  2:444140/1‑149 (MQ=255)
                                                                                            tataCCGATTACCCGACGTTGTAATCCAACATTGCGAGCGGCGTAAAGCCGCCGCTATACTAAAACAACATTTTGAATCTGTTAGCCATTTTGAGGATAAAAAGATGCGACTTCTTCATACCATGCTGCGCGTTGGCGATTTGCAACGc                                                          >  4:80899/1‑149 (MQ=255)
                                                                                               aCCGATTACCCGACGTTGTAATCCAACATTGCGAGCGGCGTAAAGCCGCCGCTATACTAAAACAACATTTTGAATCTGTTAGCCATTTTGAGGATAAAAAGATGCGTCTTCTTCATACCATGCTGCGCGTTGGCGATTTGCAACGCTc                                                        >  4:110911/1‑148 (MQ=255)
                                                                                                ccGATTACCCGACGTTGTAATCCAACATTGCGAGCGGCGTAAAGCCGCCGCTATACTAAAACAACATTTTGAATCTGTTAGCCATTTTGAGGATAAAAAGATGCGTCTTCTTCATACCATGCTGCGCGTTGGCGATTTGCAACGCTcc                                                       <  2:14944/148‑1 (MQ=255)
                                                                                                   aTTACCCGACGTTGTAATCCAACATTGCGAGCGGCGTAAAGCCGCCGCTATACTAAAACAACATTTTGAATCTGTTAGCCATTTTGAGGATAAAAAGATGc                                                                                                   <  7:28313/101‑1 (MQ=255)
                                                                                                   aTTACCCGACGTTGTAATCCAACATTGCGAGCGGCGTAAAGCCGCCGCTATACTAAAACAACATTTTGAATCTGTTAGCCATTTTGAGGATAAAAAGATGc                                                                                                   >  8:28313/1‑101 (MQ=255)
                                                                                                    ttACCCGACGTTGTAATCCAACATTGCGAGCGGCGTAAAGCCGCCGCTATACTAAAACAACATTTTGAATCTGTTAGCCATTTTGAGGATAAAAAGATGCGTCTTCTTCATACCATGCTGCGCGTTGGCGATTTGCAACGATCCATCGa                                                  >  7:500622/1‑149 (MQ=255)
                                                                                                    taacagattcaaaatgttgttttagtatagcggcgtaaagccgccgctATACTAAAACAACATTTTGAATCTGTTAGCCATTTTGAGGATAAAAAGATGCGTCTTCTTCATACCATGCTGCGCGTTGGCGATTTGCAAc                                                            <  1:152295‑M2/91‑1 (MQ=255)
                                                                                                    taacagattcaaaatgttgttttagtatagcggcgtaaagccgccgctATACTAAAACAACATTTTGAATCTGTTAGCCATTTTGAGGATAAAAAGATGCGTCTTCTTCATACCATGCTGCGCGTTGGCGATTTGCAAc                                                            >  2:152295‑M2/49‑139 (MQ=255)
                                                                                                    taacagattcaaaatgttgttttagtatagcggcgtaaagccgccgctATACTAAAACAACATTTTGAATCTGTTAGCCATTTTGAGGATAAAAAGATGCGTCTTCTTCATACCATGCTGCGCGTTGGCGATTTGCAAc                                                            >  2:158942‑M2/49‑139 (MQ=255)
                                                                                                    taacagattcaaaatgttgttttagtatagcggcgtaaagccgccgctATACTAAAACAACATTTTGAATCTGTTAGCCATTTTGAGGATAAAAAGATGCGTCTTCTTCATACCATGCTGCGCGTTGGCGATTTGCAAc                                                            <  1:158942‑M2/91‑1 (MQ=255)
                                                                                                       cccGACGTTGTAATCCAACATTGCGAGCGGCGTAAAGCCGCCGCTATACTAAATCAACATTTTGAATCTGTTAGCCATTTTGAGGATAAAAAGATGCGTCTTCTTAATACCCTCCTGCGCGTTGGCGAGTTGCAACGCTCAATCGAttt                                               >  6:364694/1‑149 (MQ=255)
                                                                                                       cccGACGTTGTAATCCAACATTGCGAGCGGCGTAAAGCCGCCGCTATACTAAAACCACATTTTGAATCTGTTAGCCATTTTGAGGATAAAAAGATGCGTCTTCTTCATTCCATGCTGCGCGTTGGCGATTTGAAACGCTCCATCGAttt                                               >  8:223910/1‑149 (MQ=255)
                                                                                                       cccGACGTTGTAATCCAACATTGCGAGCGGCGTAAAGCCGCCGCTATACTAAAACAACATTTTGAATCTGTTAGCCATTTTGAGGATAAAAAGATGCGTCTTCTTCATACCATGCTGCGCGTTGGCGATTTGCAACGCTCCATCGAttt                                               >  5:268007/1‑149 (MQ=255)
                                                                                                       cccGACGTTGTAATCCAACATTGCGAGCGGCGTAAAGCCGCCGCTATACTAAAACAACATTTTGAATCTGTTAGCCATTTTGAGGATAAAAAGATGCGTCTTCTTCATACCATGCTGCGCGTTGGCGATTTGCAACGCTCCATCGAttt                                               <  3:418445/149‑1 (MQ=255)
                                                                                                          gACGTTGTAATCCAACATTGCGAGCGGCGTAAAGCCGCCGCTATACTAAAACAACATTTTGAATCTGTTAGCCATTTTGAGGATAAAAAGATGCGTCTTCTTCATACCATGCTGCGCGTTGGCGATTTGCAACGCTCCATCGATTTTta                                            >  5:237290/1‑149 (MQ=255)
                                                                                                          gACGTTGTAATCCAACATTGCGAGCGGCGTAAAGCCGCCGCTATACTAAAACAACATTTTGAATCTGTTAGCCATTTTGAGGATAAAAAGATGCGTCTTCTTCATACCATGCTGCGCGTTGGCGATTTGCAACGCTCCATCGATTTTta                                            >  1:86433/1‑149 (MQ=255)
                                                                                                          attcaaaatgttgttttagtatAGCGGCGGCTTTACGCCGCTATACTAAAACAACATTTTGAATCTGTTAGCCATTTTGAGGATAAAAAGATGCGTCTTCTTCATACCATGCTGCGCGTTGGCGATTTGCAACGCTCCATCGATTTTta                                            <  8:59934‑M1/127‑1 (MQ=255)
                                                                                                           aCGTTGTAATCCAACATTGCGAGCGGCGTAAAGCCGCCGCTATACTAAAACAACATTTTGAATCTGTTAGCCATTTTGAGGATAAAAAGATGCGTCTTCTTCATACCATGCTGCGCGTTGGCGATTTGCAACGCTCCATCGATTTTtat                                           <  6:237290/149‑1 (MQ=255)
                                                                                                            cggtGTAATCCACCATTGCGAGCCGCGGAAAGCCGCCGCTATACTAAAACAACATTTTGAATCTGTTACCCATTTTGAGGATAAAAAGCTGCGTCTTCTTCATACCAAGCTGCGCGTTGGCGATTTGCAACGCTCCATCGATTTTtata                                          <  6:15142/146‑1 (MQ=255)
                                                                                                             gTTGTAATCCAACATTGCGAGCGGCGTAAAGCCGCCGCTATACTAAAACAACATTTTGAATCTGTTAGCCATTTTGAGGATAAAAAGATGCGTCTTCTTCATACCATGCTGCGCGTTGGCGATTTGCAACGCTCCATCGATTTTTATAc                                         >  1:371256/1‑149 (MQ=255)
                                                                                                              ttGTAATCCAACATTGCGAGCGGCGTAAAGCCGCCGCTATACTAAAACAACATTTTGAATCTGTTAGCCATTTTGAGGATAAAAAGATGCGTCTTCTTCATACCATGCTGCGCGTTGGCGATTTGCAACGCTCCATCGATTTTTATAc                                         >  4:267829/1‑148 (MQ=255)
                                                                                                                 tAATCCAACATTGCGAGCGGCGTAAAGCCGCCGCTATACTAAAACAACATTTTGAATCTGTTAGCCATTTTGAGGATAAAAAGATGCGTCTTCTTCATACCATGCTGCGCGTTGGCGATTTGCAACGCTCCATCGATTTTTATACCaaa                                     <  1:313118/149‑1 (MQ=255)
                                                                                                                  aaTCCAACATTGCGAGCGGCGTAAAGCCGCCGCTATACTAAAACAACATTTTGAATCTGTTAGCCATTTTGAGGATAAAAAGATGCGTCTTCTTCATACCATGCTGCGCGTTGGCGATTTGCAACGCTCCATCGATTTTTATACCAAAg                                    >  8:102521/1‑149 (MQ=255)
                                                                                                                   aTCCAACATTGCGAGCGGCGTAAAGCCGCCGCTATACTAAAACAACATTTTGAATCTGTTAGCCATTTTGAGGATAAAAAGATGCGTCTTCTTCATACCATGCTGCGCGTTGGCGATTTGCAACGCTCCATCGATTTTTATACCAAAGt                                   >  3:295733/1‑149 (MQ=255)
                                                                                                                   aTCCAACATTGCGAGCGGCGTAAAGCCGCCGCTATACTAAAACAACATTTTGAATCTGTTAGCCATTTTGAGGATAAAAAGATGCGTCTTCTTCATACCATGCTGCGCGTTGGCGATTTGCAACGCTCCATCGATTTTTATACCAAAGt                                   <  8:372945/149‑1 (MQ=255)
                                                                                                                    tCCAACATTGCGAGCGGCGTAAAGCCGCCGCTATACTAAAACAACATTTTGAATCTGTTAGCCATTTTGAGGATAAAAAGATGCGTCTTCTTCATACCATGCTGCGCGTTGGCGATTTGCAACGCTCCATCGATTTTTATACCAAAGTg                                  >  4:146622/1‑149 (MQ=255)
                                                                                                                      cAACATTGCGAGCGGCGTAAAGCCGCCGCTATACTAAAACAACATTTTGAATCTGTTAGCCATTTTGAGGATAAAAAGATGCGTCTTCTTCATACCATGCTGCGCGTTGGCGATTTGCAACGCTCCATCGATTTTTATACCAAAGTGCt                                <  3:187394/149‑1 (MQ=255)
                                                                                                                        aCATTGCGAGCGGCGTAAAGCCGCCGCTATACTAAAACAACATTTTGAATCTGTTAGCCATTTTGAGGATAAAAAGATGCGTCTTCTTCATACCATGCTGCGCGTTGGCGATTTGCAACGCTCCATCGATTTTTATACCAAAGTGCTgg                              <  3:110911/149‑1 (MQ=255)
                                                                                                                         cATTGCGAGCGGCGTAAAGCCGCCGCTATACTAAAACAACATTTTGAATCTGTTAGCCATTTTGAGGATAAAAAGATGCGTCTTCTTCATACCATGCTGCGCGTTGGCGATTTGCAACGCTCCATCGATTTTTATACCAAAGTGCTggg                             >  1:244840/1‑149 (MQ=255)
                                                                                                                           ttGCGAGCGGCGTAAAGCCGCCGCTATACTAAAACAACATTTTGAATCTGTTAGCCATTTTGAGGATAAAAAGATGCGTCTTCTTCATACCATGCTGCGCGTTGGCGATTTGCAACGCTCCATCGATTTTta                                            >  1:179941/1‑132 (MQ=255)
                                                                                                                           ttGCGAGCGGCGTAAAGCCGCCGCTATACTAAAACAACATTTTGAATCTGTTAGCCATTTTGAGGATAAAAAGATGCGTCTTCTTCATACCATGCTGCGCGTTGGCGATTTGCAACGCTCCATCGATTTTta                                            <  2:179941/132‑1 (MQ=255)
                                                                                                                            gtatagcggcggctttacgccgctATACTAAAACAACATTTTGAATCTGTTAGCCATTTTGAGGATAAAAAGATGCGTCTTCTTCATACCATGCTGCGCGTTGGCGATTTGCAACGCTCCATCGATTTTTATACCAAAGTGCTGGGCAt                          >  1:119966‑M2/25‑149 (MQ=255)
                                                                                                                               tagcggcggctttacgccgctATACTAAAACAACATTTTGAATCTGTTAGCCATTTTGAGGATAAAAAGATGCGTCTTCTTCATACCATGCTGCGCGTTGGCGATTTGCAACGCTCCATCGATTTTTATACCAAAGTGCTGGGCATGa                        <  2:119966‑M2/127‑1 (MQ=255)
                                                                                                                               gAGCGGCGTAAAGCCGCCGCTATACTAAAACAACATTTTGAATCTGTTAGCCATTTTGAGGATAAAAAGATGCGTCTTCTTCATACCATGCTGCGCGTTGGCGATTTGCAACGCTCCATCGATTTTTATACCAAAGTGCTGGGCATGa                        >  5:35872/1‑148 (MQ=255)
                                                                                                                                 GCGGCGTAAAGCCGCCGCTATACTAAAACAACATTTTGAATCTGTTAGCCATTTTGAGGATAAAAAGATGCGTCTTCTTCATACCATGCTGCGCGTTGGCGATTTGCAACGCTCCATCGATTTTTATACCAAAGTGCTGGGCATGAAAc                     >  7:102521‑M1/1‑149 (MQ=255)
                                                                                                                                     CGTAAAGCCGCCGCTATACTAAAACAACATTTTGAATCTGTTAGCCATTTTGAGGATAAAAAGATGCGTCTTCTTCATACCATGCTGCGCGTTGGCGATTTGCAACGCTCCATCGATTTTTATACCAAAGTGCTGGGCATGAAActgct                 <  1:484772‑M1/149‑1 (MQ=255)
                                                                                                                                      GTAAAGCCGCCGCTATACTAAAACAACATTTTGAATCTGTTAGCCATTTTGAGGATAAAAAGATGCGTCTTCTTCATACCATGCTGCGCGTTGGCGATTTGCAACGCTCCATCGATTTTTATACCAAAGTGCTGGGCATGAAActgctg                <  2:424798‑M1/149‑1 (MQ=255)
                                                                                                                                      GTAAAGCCGCCGCTATACTAAAACAACATTTTGAATCTGTTAGCCATTTTGAGGATAAAAAGATGCGTCTTCTTCATACCATGCTGCGCGTTGGCGATTTGCAACGCTCCATCGATTTTTATACCAAAGTGCTGGGCATGAAActgctg                >  5:39475‑M1/1‑149 (MQ=255)
                                                                                                                                        aaaGCCGCCGCTATACTAAAACAACATTTTGAATCTGTTAGCCATTTTGAGGATAAAAAGATGCGTCTTCTTCATACCATGCTGCGCGTTGGCGATTTGCAACGCTCCATCGATTTTTATACCAAAGTGCTGGGCATGAAACTGCTGCg              >  8:156880/1‑149 (MQ=255)
                                                                                                                                           gccgccGCTATACTAAAACAACATTTTGAATCTGTTAGCCATTTTGAGGATAAAAAGATGCGTCTTCTTCATACCATGCTGCGCGTTGGCGATTTGCAACGCTCCATCGATTTTTATACCAAAGTGCTGGGCATGAAACTGCTGCGTAc           <  3:146622/149‑1 (MQ=255)
                                                                                                                                              gccgctATACTAAAACAACATTTTGAATCTGTTAGCCATTTTGAGGATAAAAAGATGCGTCTTCTTCATACCATGCTGCGCGTTGGCGATTTGCAACGCTCCATCGATTTTTATACCAAAGTGCTGGGCATGAAACTGCTGCGTACCAg        <  6:209685‑M2/143‑1 (MQ=255)
                                                                                                                                                   tATACTAAAACAACATTTTGAATCTGTTAGCCATTTTGAGGATAAAAAGATGCGTCTTCTTCATACCATGCTGCGCGTTGGCGATTTGCAACGCTCCATCGATTTTTATACCAAAGTGCTGGGCATGAAACTGCTGCGTACCa         >  1:50169‑M2/2‑143 (MQ=255)
                                                                                                                                                   tATACTAAAACAACATTTTGAATCTGTTAGCCATTTTGAGGATAAAAAGATGCGTCTTCTTCATACCATGCTGCGCGTTGGCGATTTGCAACGCTCCATCGATTTTTATACCAAAGTGCTGGGCATGAAACTGCTGCGTACCa         <  2:50169‑M2/142‑1 (MQ=255)
                                                                                                                                                    ataCTAAAACAACATTTTGAATCTGTTAGCCATTTTGAGGATAAAAAGATGCGTCTTCTTCATACCATGCTGCGCGTTGGCGATTTGCAACGCTCCATCGATTTTTATACCAAAGTGCTGGGCATGAAACTGCTGCGTACCAGCGaaaa  >  3:437803/1‑149 (MQ=255)
                                                                                                                                                    |                                                                                                                                                    
TTGCGAACCCGGATCTGGTCGCCCGCTTGCAGCGCAAAGCTGAGCTTAACCCACAGCGTGCCGAAAGTTTCTACGGTGGCGGCGCGGAAGGCTATACCGATTACCCGACGTTGTAATCCAACATTGCGAGCGGCGTAAAGCCGCCGCTATACTAAAACAACATTTTGAATCTGTTAGCCATTTTGAGGATAAAAAGATGCGTCTTCTTCATACCATGCTGCGCGTTGGCGATTTGCAACGCTCCATCGATTTTTATACCAAAGTGCTGGGCATGAAACTGCTGCGTACCAGCGAAAA  >  NC_000913/1727641‑1727937

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.