| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,176,319 | C→A | 54.1% | C172F (TGT→TTT) | cpdA ← | 3',5' cAMP phosphodiesterase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,176,319 | 0 | C | A | 54.1% | 8.7 / 142.4 | 100 | C172F (TGT→TTT) | cpdA | 3',5' cAMP phosphodiesterase |
| Reads supporting (aligned to +/- strand): ref base C (25/21); new base A (23/31); total (48/52) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.16e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.90e-01 | |||||||||||
Only 100 of 102 total aligned reads displayed.
GGCGTTGCCAGCAGGCGGCGACCATTCCAGTCGAGATCCAGCTCCTGATGAATATGACCGCACAGCAAGTATTTGACGTGCGGAAACTTCGCCAGCACGGTATCCAGTTCGCCCGCGTTACGCAGACTGTGTTGATCGAGCCAACTACAACCCGCAGGTAGCGGATGATGATGCAGCAGCAGCAACGTATGGCGTTCTGGCGCATCGGCCAGTTTACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGTGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGAT > NC_000913/3176172‑3176464 | ggCGTTGCCAGCAGGCGGCGACCATTCCAGTCGAGATCCAGCTCCTGATGAATATGACCGCACAGCAAGTATTTGACGTGCGGAAACTTCGCCAGCACGGTATCCAGTTCGCCCGCGTTACGCAGACTGTGTTGATCGAGCCAACTAc > 3:395094/1‑148 (MQ=255) gCGTTGCCAGCAGGCGGCGACCATTCCAGTCGAGATCCAGCTCCTGATGAATATGACCGCACAGCAAGTATTTGACGTGCGGAAACTTCGCCAGCACGGTATCCAGTTCGCCCGCGTTACGCAGACTGTGTTGATCGAGCCAACTaaaa < 3:320796/149‑1 (MQ=255) gTTGCCAGCAGGCGGCGACCATTCCAGTCGAGATCCAGCTCCTGATGAATATGACCGCACAGCAAGTATTTGACGTGCGGAACCTTCGCCAGCACGGGATCCAGTTCGCCCGCGTTACGCAGACTGTGTTGATCGAGCCACCTAAAAcc > 5:308817/1‑149 (MQ=255) ccAGCAGGCGGCGACCATTCCAGTCGAGATCCAGCTACTGATGAATATGACCGCACAGCAAGTATTTGACGTGCGGAAACTTCGCCAGCACGGTATCCAGTTCGCCCGCGTTACGCAGACTGTGTTGATCGAGCCAACTAAAACCCGCa < 8:485889/149‑1 (MQ=255) cagcagGCGGCGACCATTCCAGTCGAGATCCAGCTCCTGATGAATATGACCGCACAGCAAGTATTTGACGTGCGGAAACTTCGCCAGCACGGTATCCAGTTCGCCCGCGTTACGCAGACTGTGTTGATCGAGCCAACTACAACCCGCAg > 4:291326/1‑149 (MQ=255) cagcagGCGGCGACCATTCCAGTCGAGATCCAGCTCCTGATGAATATGACCGCACAGCAAGTATTTGACGTGCGGAAACTTCGCCAGCACGGTATCCAGTTCGCCCGCGTTACGCAGACTGTGTTGATCGAGCCAACTACAACCCGCAg < 4:395094/149‑1 (MQ=255) cagcagGCGGCGACCATTCCAGTCGAGATCCAGCTCCTGATGAATATGACCGCACAGCAAGTATTTGACGTGCGGAAACTTCGCCAGCACGGTATCCAGTTCGCCCGCGTTACGCAGACTGTGTTGATCGAGCCAACTAAAACCCGCAg < 2:32231/149‑1 (MQ=255) cagcagGCGGCGACCATTCCAGTCGAGATCCAGCTCCTGATGAATATGACCGCACAGCAAGTATTTGACGTGCGGAAACTTCGCCAGCACGGTATCCAGTTCGCCCGCGTTACGCAGACTGTGTTGATCGAGCCAACTAAAACCCGCAg < 5:463889/149‑1 (MQ=255) agcagGCGGCGACCATTCCAGTCGAGATCCAGCTCCTGATGAATATGACCGCACAGCAAGTATTTGACGTGCGGAAACTTCGCCAGCACGGTATCCAGTTCGCCCGCGTTACGCAGACTGTGTTGATCGAGCCAACTAAAACCCGCAgg > 6:315902/1‑149 (MQ=255) agGCGGCGACCATTCCAGTCGAGATCCAGCTCCTGATGAATATGACCGCACAGCAAGTATTTGACGTGCGGAAACTTCGCCAGCACGGTATCCAGTTCGCCCGCGTTACGCAGACTGTGTTGATCGAGCCAACTAAAACCCGCAGGTAg > 8:146341/1‑149 (MQ=255) gcggcgACCATTCCAGTCGAGATCCAGCTCCTGATGAATATGACCGCACAGCAAGTATTTGACGTGCGGAAACTTCGCCAGCACGGTATCCAGTTCGCCCGCGTTACGCAGACTGTGTTGATCGAGCCAACTACAACCCGCAGGTAGCg < 2:323363/149‑1 (MQ=255) ggcgACCATTCCAGTCGAGATCCAGCTCCTGATGAATATGACCGCACAGCAAGTATTTGACGTGCGGAAACTTCGCCAGCACGGTATCCAGTTCGCCCGCGTTACGCAGACTGTGTTGATCGAGCCAACTACAACCCGCAGGTAGc < 4:437542/146‑1 (MQ=255) ggcgACCATTCCAGTCGAGATCCAGCTCCTGATGAATATGACCGCACAGCAAGTATTTGACGTGCGGAAACTTCGCCAGCACGGTATCCAGTTCGCCCGCGTTACGCAGACTGTGTTGATCGAGCCAACTACAACCCGCAGGTAGc > 3:437542/1‑146 (MQ=255) cgACAATTCCAGTCGAGATCCAGCTACTGATGAATATGACCGCACAGCAAGTATTTGACGTGCGGAAACTTCGCAAGCACGGTATCCAGTTCGCCCGCGTTACGCAGACTGTGTTGATCGAGCCAACTAAAACACGCAGGTAGCTgat > 8:418527/1‑148 (MQ=255) aTTCCAGTCGAGATCCAGCTCCTGATGAATATGACCGCACAGCAAGTATTTGACGTGCGGAAACTTCGCCAGCACGGTATCCAGTTCGCCCGCGTTACGCAGACTGTGTTGATCGAGCCAACTAAAACCCGCAGGTAGCGgatgatgat < 7:42624/149‑1 (MQ=255) ttCCAGTCGAGATCCAGCTCCTGATGAATATGACCGCACAGCAAGTATTTGACGTGCGGAAACTTCGCCAGCACGGTATCCAGTTCGCCCGCGTTACGCAGACTGTGTTGATCGAGCCAACTAAAACCCGCAGGTAGCGGatgatgatg < 6:192867/149‑1 (MQ=255) ttCCAGTCGAGATCCAGCTCCTGATGAATATGACCGCACAGCAAGTATTTGACGTGCGGAAACTTCGCCAGCACGGTATCCAGTTCGCCCGCGTTACGCAGACTGTGTTGATCGAGCCAACTAAAACCCGCAGGTAGCGGatgatgatg < 1:135281/149‑1 (MQ=255) aGTCGAGATCCATCTCCT‑ATGAATATGACCGCACAGCAAGTATTTGACGTGCGGAAACTTCGCCAGCACGGTATCCAGTTCGCCCGCGTTACGCAGACTGTGTTGATCGAGCCAACTACAACCCGCAGGTAGc < 1:136267/133‑1 (MQ=255) aGTCGAGATCCAGCTCCT‑ATGAATATGACCGCACAGCAAGTATTTGACGTGCGGAAACTTCGCCAGCACGGTATCCAGTTCGCCCGCTTTACGCAGAATGTGTTGATCTAGCAAACTACAACCCGCAGGTAGc > 2:136267/1‑133 (MQ=255) cGAGATCCAGCTCCTGATGAATATGACCGCACAGCAAGTATTTGACGTGCGGAAACTTCGCCAGCACGGTATCCAGTTCGCCCGCGTTACGCAGACTGTGTTGATCGAGCCAACTAAAACCCGCAgg < 7:199085/127‑1 (MQ=255) cGAGATCCAGCTCCTGATGAATATGACCGCACAGCAAGTATTTGACGTGCGGAAACTTCGCCAGCACGGTATCCAGTTCGCCCGCGTTACGCAGACTGTGTTGATCGAGCCAACTAAAACCCGCAgg > 8:199085/1‑127 (MQ=255) gagaTCCAGCTCCTGATGAATATGACCGCACAGCAAGTATTTGACGTGCGGAAACTTCGCCAGCACGGTATCCAGTTCGCCCGCGTTACGCAGACTGTGTTGATCGAGCCAACTACAACCCGCAGGTAGCGGATGATGATgcagcag > 3:188701/1‑147 (MQ=255) gagaTCCAGCTCCTGATGAATATGACCGCACAGCAAGTATTTGACGTGCGGAAACTTCGCCAGCACGGTATCCAGTTCGCCCGCGTTACGCAGACTGTGTTGATCGAGCCAACTAAAACCCGCAGGTAGCGGATGATGATgcagcag > 6:376721/1‑147 (MQ=255) gaTCCAGCTCCTGATGAATATGACCGCACAGCAAGTATTTGACGTGCGGAAACTTCGCCAGCACGGTATCCAGTTCGCCCGCGTTACGCAGACTGTGTTGATCGAGCCAACTACAACCCGCAGGTAGCGGATGATGATgcagcagcag > 3:298366/1‑148 (MQ=255) gaTCCAGCTCCTGATGAATATGACCGCACAGCAAGTATTTGACGTGCGGAAACTTCGCCAGCACGGTATCCAGTTCGCCCGCGTTACGCAGACTGTGTTGATCGAGCCAACTACAACCCGCAGGTAGCGGATGATGATgcagcagcag > 8:273965/1‑148 (MQ=255) gaTCCAGCTCCTGATGAATATGACCGCACAGCAAGTATTTGACGTGCGGAAACTTCGCCAGCACGGTATCCAGTTCGCCCGCGTTACGCAGACTGTGTTGATCGAGCCAACTAAAACCCGCAGGTAGCGGATGATGATgcagcagcag > 2:243669/1‑148 (MQ=255) aTCCAGCTCCTGATGAATATGACCGCACAGCAAGTATTTGACGTGCGGAAACTTCGCCAGCACGGTATCCAGTTCGCCCGCGTTACGCAGACTGTGTTGATCGAGCCAACAACAACACGCAGGTATCGGATGATGATgcagcagcagc > 4:159688/1‑148 (MQ=255) cAGCTCCTGATGAATATGACCGCACAGCAAGTATTTGACGTGCGGAAACTTCGCCAGCGCGGTATCCAGTTCGCCCGCGTTACGCAGACTGTGTTGATCGAGCCAACTAAAACCCGCAGGTAGCGGATGATGATGCAGCAGCAGCAACg > 2:78110/1‑149 (MQ=255) aGCTCCTGATGAATATGACCGCACAGCAAGTATTTGACGTGCGGAAACTTCGCCAGCACGGTATCCAGTTCGCCCGCGTTACGCAGACTGTGTTTATCGAGCCAACTAAAACCCGCAGGTAGCGGATGATGATGCAGCAGCAGCAACg > 8:448657/1‑148 (MQ=255) ccTGATGAATATGACCGCACAGCAAGTATTTGACGTGCGGAAACTTCGCCAGCACGGTATCCAGTTCGCCCGCGTTACGCAGACTGTGTTGATCGAGCAAACTACAACCCGCAGAAAGCGGATGATGATGCAGCAGCAGCAACGTATgg > 4:429593/1‑149 (MQ=255) cTGATGAATATGACCGCACAGCAAGTATTTGACGTGCGGAAACTTCGCCAGCGCGGTATCCAGTTCGCCCGCGTTACGCAGACTGTGTTGATCGAGCCAACTAAAACCCGCAGGTAGCGGATGATGATGCAGCAGCAGCAACGTATgg < 1:78110/148‑1 (MQ=255) cTGATGAATATGACCGCACAGCAAGTATTTGACGTGCGGAAACTTCGCCAGCACGGTATCCAGTTCGCCCGCGTTACGCAGACTGTGTTGATCGAGCCAACTAAAACCCGCAGGTAGCGGATGATGATGCAGCAGCAGCAACGTATgg < 7:171198/148‑1 (MQ=255) cTGATGAATATGACCGCACAGCAAGTATTTGACGTGCGGAAACTTCGCCAGCACGGTATCCAGTTCGCCCGCGTTACGCAGACTGTGTTGATCGAGCCAACTAAAACCCGCAGGTAGCGGATGATGATGCAGCAGCAGCAACGTATg < 1:243669/147‑1 (MQ=255) cTGATGAATATGACCGCACAGCAAGTATTTGACGTGCGGAAACTTCGCCAGCACGGTATCCAGTTCGCCCGCGTTACGCAGACTGTGTTGATCGAGCCAACTAAAACCCGCAGGTAGCGGATGATGATGCAGCAGCAGCAACGTATGGc < 3:334052/149‑1 (MQ=255) tgatgaATATGACCGCACAGCAAGTATTTGACGTGCGGAAACTTCGCCAGCACGGTATCCAGTTCGCCCGCGTTACGCAGACTGTGTTGATCGAGCCAACTAAAACCCGCAGGTAGCGGATGATGATGCAGCAGCAGCAACGTATGGCg > 7:3353/1‑149 (MQ=255) gatgaATATGACCGCACAGCAAGTATTTGACGTGCGGAAACTTCGCCAGCACGGTATCCAGTTCGCCCGCGTTACGCAGACTGTGTTGATCGAGCCAACTACAACCCGCAGGTAGCGGATGATGATgcagcag > 5:169610/1‑133 (MQ=255) gatgaATATGACCGCACAGCAAGTATTTGACGTGCGGAAACTTCGCCAGCACGGTATCCAGTTCGCCCGCGTTACGCAGACTGTGTTGATCGAGCCAACTACAACCCGCAGGTAGCGGATGATGATgcagcag < 6:169610/133‑1 (MQ=255) atgaATATGACCGCACAGCAAGTATTTGACGTGCGGAAACTTCGCCAGCACGGTATCCAGTTCGCCCGCGTTACGCAGACTGTGTTGATCGAGCCAACTACAACCCGCAGGTAGCGGATGATGATGCAGCAGCAGCAACGTATGGCGtt > 7:129292/1‑149 (MQ=255) atgaATATGACCGCACAGCAAGTATTTGACGTGCGGAAACTTCGCCAGCACGGTATCCAGTTCGCCCGCGTTACGCAGACTGTGTTGATCGAGCCAACTAAAACCCGCAGGTAGCGGATGATGATGCAGCAGCAGCAACGTATGGCGtt > 1:300107/1‑149 (MQ=255) tgaATATGACCGCACAGCAAGTATTTGACGTGCGGAAACTTCGCCAGCACGGTATCCAGTTCGCCCGCGTTACGCAGACTGTGTTGATCGAGCCAACTAAAACCCGCAGGTAGCGGATGATGATGCAGCAGCAGCAACGTATGGCg > 7:166071/1‑146 (MQ=255) tgaATATGACCGCACAGCAAGTATTTGACGTGCGGAAACTTCGCCAGCACGGTATCCAGTTCGCCCGCGTTACGCAGACTGTGTTGATCGAGCCAACTAAAACCCGCAGGTAGCGGATGATGATGCAGCAGCAGCAACGTATGGCg < 8:166071/146‑1 (MQ=255) gaATATGACCGCACAGCAAGTATTTGACGTGCGGAAACTTCGCCAGCACGGTATCCAGTTCGCCCGCGTTACGCAGACTGTGTTGATCGAGCCAACTAAAACCCGCAGGTAGCGGATGATGATGCAGCAGCAGCAACGTATGGCGTTCt > 1:120859/1‑149 (MQ=255) atatGACCGCACAGCAAGTATTTGACGTGCGGAAACTTCGCCAGCACGGTATCCAGTTCGCCCGCGTTACGCAGACTGTGTTGATCGAGCCAACTACAACCCGCAGGTAGCGGATGATGATGCAGCAGCAGCAACGTATGGCGTTCTgg < 8:129292/149‑1 (MQ=255) gACCGCACAGCAAGTATTTGACGTGCGGAAACTTCGCCAGCACGGTATCCAGTTCGCCCGCGTTACGCAGACTGTGTTGATCGAGCCAACTACAACCCGCAGGTAGCGGATGATGATGCAGCAGCAGCAACGTATGGCGTTCTGGCGCa > 8:379772/1‑149 (MQ=255) aCCGCACAGCAAGTATTTGACGTGCGGAAACTTCGCCAGCACGGTATCCAGTTCGCCCGCGTTACGCAGACTGTGTTGATCGAGCCAACTACAACCCGCAGGTAGCGGATGATGATGCAGCAGCAGCAACGTATGGCGTTCTGGCGCAt < 4:188701/149‑1 (MQ=255) aCCGCACAGCAAGTATTTGACGTGCGGAAACTTCGCCAGCACGGTATCCAGTTCGCCCGCGTTACGCAGACTGTGTTGATCGAGCCAACTAAAACCCGCAGGTAGCGGATGATGATGCAGCAGCAGCAACGTATGGCGTTCTGGCGCAt > 1:367355/1‑149 (MQ=255) ccGCACAGCAAGTATTTGACGTGCGGAAACTTCGCCAGCACGGTATCCAGTTCGCCCGCGTTACGCAGACTGTGTTGATCGAGCCAACTAAAACCCGCAGGTAGCGGATGATGATGCAGCAGCAGCAACGTATGGCGTTCTGGCGCATc < 1:380053/149‑1 (MQ=255) ccGCACAGCAAGTATTTGACGTGCGGAAACTTCGCCAGCACGGTATCCAGTTCGCCCGCGTTACGCAGACTGTGTTGATCGAGCCAACTAAAACCCGCAGGTAGCGGATGATGATGCAGCAGCAGCAACGTATGGCGTTCTGGCGCATc > 7:498864/1‑149 (MQ=255) gCACAGCAAGTATTTGACGTGCGGAAACTTCGCCAGCACGGTATCCAGTTCGCCCGCGTTACGCAGACTGTGTTGATCGAGCCAACTACAACCCGCAGGTAGCGGATGATGATGCAGCAGCAGCAAc > 3:99636/1‑127 (MQ=255) gCACAGCAAGTATTTGACGTGCGGAAACTTCGCCAGCACGGTATCCAGTTCGCCCGCGTTACGCAGACTGTGTTGATCGAGCCAACTAAAACCCGCAGGTAGCGGATGATGATGCAGCAGCAGCAACGTATGGCGTTCTGGCGCATCgg < 8:100741/149‑1 (MQ=255) cacaGCAAGTATTTGACGTGCGGAAACTTCGCCAGCACGGTATCCAGTTCGCCCGCGTTACGCAGACTGTGTTGATCGAGCCAACTACAACCCGCAGGTAGCGGATGATGATGCAGCAGCAGCAACGTATGGCGTTCTGGCGCATCGGc < 3:291326/149‑1 (MQ=255) acaGCAAGTATTTGACGTGCGGAAACTTCGCCAGCACGGTATCCAGTTCGCCCGCGTTACGCAGACTGTGTTGATCGAGCCAACTAAAACCCGCAGGTAGCGGATGATGATGCAGCAGCAGCAACGTATGGCGTTCTGGCGCATCGGcc < 8:3353/149‑1 (MQ=255) caGCAAGTATTTGACGTGCGGAAACTTCGCCAGCACGGTATCCAGTTCGCCCGCGTTACGCAGACTGTGTTGATCGAGCCAACTACAACCCGCAGGTAGCGGATGATGATGCAGCAGCAGCAACGTATGGCGTTCTGGCGCATCGGCCa < 2:29463/149‑1 (MQ=255) cAAGTATTTGACGTGCGGAAACTTCGCCAGCACGGTATCCAGTTCGCCCGCGTTACGCAGACTGTGTTGATCGAGCCAACTACAACCCGCAGGTAGCGGATGATGATGCAGCAGCAGCAACGTATGGCGTTCTGgc > 5:276415/1‑136 (MQ=255) cAAGTATTTGACGTGCGGAAACTTCGCCAGCACGGTATCCAGTTCGCCCGCGTTACGCAGACTGTGTTGATCGAGCCAACTACAACCCGCAGGTAGCGGATGATGATGCAGCAGCAGCAACGTATGGCGTTCTGgc < 6:276415/136‑1 (MQ=255) cAAGTATTTGACGTGCGGAAACTTCGCCAGCACGGTATCCAGTTCGCCCGCGTTACGCAGACTGTGTTGATCGAGCCAACTAAAACCCGCAGGTAGCGGATGATGATGCAGCAGCAGCAACGTATGGCGTTCTGGCGCATCGGCCAGtt < 7:146341/149‑1 (MQ=255) aaGTATTTGACGTGCGGAAACTTCGCCAGCACGGTATCCAGTTCGCCCGCGTTACGCAGACTGTGTTGATCGAGCCAACTACAACCCGCAGGTAGCGGATGATGATGCAGCAGCAGCAACGTATGGCGTTCTGGCGCATCg > 2:398811/1‑141 (MQ=255) aaGTATTTGACGTGCGGAAACTTCGCCAGCACGGTATCCAGTTCGCCCGCGTTACGCAGACTGTGTTGATCGAGCCAACTACAACCCGCAGGTAGCGGATGATGATGCAGCAGCAGCAACGTATGGCGTTCTGGCGCATCg < 1:398811/141‑1 (MQ=255) aGTATTTGACGTGCGGAAACTTCGCCAGCACGGTATCCAGTTCGCCCGCGTTACGCAGACTGTGTTGATCGAGCCAACTAAAACCCGCAGGTAGCGGATGATGATGCAGCAGCAGCAACGTATGGCGTTCTGGCGCATCGGCCAGTTTa < 5:376721/149‑1 (MQ=255) tATTTGACGTGCGGAAACTTCGCCAGCACGGTATCCAGTTCGCCCGCGTTACGCAGACTGTGTTGATAGAGCCAACTAAAACCCGCAGGTAGCGGATGATGATTCAGCAGCAGCAACGTATGGCGTTCTGGCGCATCGGCGAGTTTACg < 2:84413/149‑1 (MQ=255) aCGTGCGGAAACTTCGCCAGCACGGTATCCAGTTCGCCCGCGTTACGCAGACTGTGTTGATCGAGCCAACTACAACCCGCAGGTAGCGGATGATGATGCAGCAGCAGCAACGTATGGCGTTCTGGCGCATCGGCCAGTTTACGTTCCa < 7:273965/148‑1 (MQ=255) aCGCGCGGAAACTTCGCCAGCACGGTATCCAGTTCGCCCGCGTTACGCAGACGGTGTTGAGCGAGCCACCTACACCCCGCAGGTAGCGGCTGATGATGCAGCAGCAGCAACGTATGGCGTTCTGGCGCATCGGCCAGTTTACGTTCCa < 6:308817/148‑1 (MQ=255) tGCGGAAACTTCGCCAGCACGGTATCCAGTTCGCCCGCGTTACGCAGACTGTGTTGATCGAGCCAACTAAAACCCGCAGGTAGCGGATGATGATGCAGCAGCAGCAACGTATGGCGTTCTGGCGCATCGGCCAGTTTACGTTCCAGCCa < 5:315902/149‑1 (MQ=255) tGCGGAAACTTCGCCAGCACGGTATCCAGTTCGCCCGCGTTACGCAGACTGTGTTGATCGAGCCAACTAAAACCCGCAGGTAGCGGATGATGATGCAGCAGCAGCAACGTATGGCGTTCTGGCGCATCGGCCAGTTTACGTTCCAGCCa < 2:367355/149‑1 (MQ=255) ggAAACTTCGCTAGCACTGTATCCAGTTCGCCCGCTTTACGCAGACTTTGTTGATAGAGCCAACTAAAACCCGCAGGTAGCGGATGATGATGCAGCAGCAGCAACGTATTGCGTTCTGGCGCATCGTCCAGTTTACGTTCCAGCCACTc < 7:418527/149‑1 (MQ=255) gAAACTTCGCCAGCACGGTATCCAGTTCGCCCGCGTTACGCAGACTGAGTTGATCGAGCCAACTAAAACCCGCAGGTAGCGGATGATGATGCAGCAGCAGCAACGTATGGCGTTCTGGCGCATCGGCCAGTTTACGTTCCAGCCACTc > 6:89987/1‑148 (MQ=255) ccAGCACGGTATCCAGTTCGCCCGCGTTACGCAGACTGTGTTGATCGAGCCAACTACAACCCGCAGGTAGCGGATGATGATGCAGCAGCAGCAACGTATGGCGTTCTGGCGCATCGGCCAGTTTACGTTCCAGCCACTCAAGCTGAAAc < 4:298366/149‑1 (MQ=255) aGCACGGTATCCAGTTCGCCCGCGTTACGCAGACTGTGTTGATCGAGCCAACTACAACCCGCAGGTAGCGGATGATGATGCAGCAGCAGCAACGTATGGCGTTCTGGCGCATCGGCCAGTTTACGTTCCAGCCACTCAAGCTGAAACTc > 1:288385/1‑149 (MQ=255) cGGTATCAAGTTCGCCCGCGTTACGCAGACTGTGTTGATCGAGCCAACTACAACCCGCAGGTAGCGGATGATGATGCAGCATCAGCAACGTATGGCGTTCTGGCGCATCGGCCAGTTTACGTTCCAGCCACTCAAGCTGAAACTCgctc < 3:429593/149‑1 (MQ=255) ggTATCCAGTTCGCCCGCGTTACGCAGACTGTGTTGATCGAGCCAACTAAAACCCGCAGGTAGCGGATGATGATGCAGCAGCAGCAACGTATGGCGTTCTGGCGCATCGGCCAGTTTACGTTCCAGCCACTCAAGCTGAAACTCgct > 6:100452/1‑147 (MQ=255) ggTATCCAGTTCGCCCGCGTTACGCAGACTGTGTTGATCGAGACAACTACAACCCGCAGGTAGCGGATGATGATGAAGAAGCAGCAACGTATGGCGTTCTGTCGCATCGGCCAGTTTACGTTCCAGCCACTCAAGCTGAAACTCgctca > 1:124549/1‑149 (MQ=255) aGTTCGCCCGCGTTACGCAGACTGTGTTGATCGAGCCAACTACAACCCGCAGGTAGCGGATGATGATGCAGCAGCAGCAACGTATGGCGTTCTGGCGCCTCGGCCAGTTTACGTTCCCGCCACTCAAGCTGAAACTCGCTCAGCTcccc > 7:215776/1‑149 (MQ=255) aGTTCGCCCGCGTTACGCAGACTGTGTTGATCGAGCCAACTACAACCCGCAGGTAGCGGATGATGATGCAGCAGCAGCAACGTATGGCGTTCTGGCGCATCGGCCAGTTTACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCAcc > 1:57458/1‑149 (MQ=255) aGTTCGCCCGCGTTACGCAGACTGTGTTGATCGAGCCAACTAAAACCCGCAGGTAGCGGATGATGATGCAGCAGCAGCAACGTATGGCGTTCTGGCGCATCGGCCAGTTTACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCAcc < 8:498864/149‑1 (MQ=255) gTTCGCCCGCGTTACGCAGACTGTGTTGATCGAGCCAACTAAAACCCGCAGGTAGCGGATGATGATGCAGCAGCAGCAACGTATGGCGTTCTGGCGCATCGGCCAGTTTACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCg < 2:300107/149‑1 (MQ=255) gCCCGCGTTACGCAGACTGTGTTGATCGAGCCAACTACAACCCGCAGGTAGCGGATGATGATGCAGCAGCAGCAACGTATGGCGTTCTGGCGCATCGGCCAGTTTACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGTGCg < 7:379772/149‑1 (MQ=255) gCCCGCGTTACGCAGACTGTGTTGATCGAGCCAACTACAACCCGCAGGTAGCGGATGATGATGCAGCAGCAGCAACGTATGGCGTTCTGGCGCATCGGCCAGTTTACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGTGCg > 8:252668/1‑149 (MQ=255) gCCCGCGTTACGCAGACTGTGTTGATCGAGCCAACTAAAACCCGCAGGTAGCGGATGATGATGCAGCAGCAGCAACGTATGGCGTTCTGGCGCATCGGCCAGt < 1:147477/103‑1 (MQ=255) gCCCGCGTTACGCAGACTGTGTTGATCGAGCCAACTAAAACCCGCAGGTAGCGGATGATGATGCAGCAGCAGCAACGTATGGCGTTCTGGCGCATCGGCCAGt > 2:147477/1‑103 (MQ=255) gCCCGCGTTACGCAGACTGTGTTGATCGAGCCAACTAAAACCCGCAGGTAGCGGATGATGATGCAGCAGCAGCAACGTATGGCGTTCTGGCGCATCGGCCAGTTTACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGTGc < 6:169491/148‑1 (MQ=255) gCCCGCGTTACGCAGACTGTGTTGATCGAGCCAACTAAAACCCGCAGGTAGCGGATGATGATGCAGCAGCAGCAACGTATGGCGTTCTGGCGCATCGGCCAGTTTACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGTGCg < 4:446331/149‑1 (MQ=255) ccGCGTTACGCAGACTGTGTTGATCGAGCCAACTAAAACCCGCAGGTAGCGGATGATGATGCAGCAGCAGCAACGTATGGCGTTCTGGCGCATCGGCCAGTTTACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGTGCgg > 7:488304/1‑148 (MQ=255) gcgTTACGCAGACTGTGTTGATCGAGCCAACTACAACCCGCAGGTAGCGGATGATGATGCAGCAGCAGCAACGTATGGCGTTCTg < 7:197332/85‑1 (MQ=255) gcgTTACGCAGACTGTGTTGATCGAGCCAACTACAACCCGCAGGTAGCGGATGATGATGCAGCAGCAGCAACGTATGGCGTTCTg > 8:197332/1‑85 (MQ=255) gCAGACTGAGTTGATCGAGCCAACTAAAACCCGCAGGTAGCGGATGATGATGCAGCAGCAGCAACGTATGGCGTTCTGGCGCATCGGCCAGTTTACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGTGCGGCACGCCAAac > 4:371878/1‑149 (MQ=255) aCTGAGTTGATCGAGCCAACTAAAACCCGCAGGTAGCGGATGATGATGCAGCAGCAGCAACGTATGGCGTTCTGGCGCATCGGCCAGTTTACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGTGCGGCACGCCAAACACCt < 5:89987/149‑1 (MQ=255) cTGTGTTGATCGAGCCAACTACAACCCGCAGGTAGCGGATGATGATGCAGCAGCAGCAACGTATGGCGTTCTGGCGCATCGGCCAGTTTACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGTGCGGCACGCCAAACACCTg < 2:240259/149‑1 (MQ=255) cTGTGTTGATCGAGCCAACTACAACCCGCAGGTAGCGGATGATGATGCAGCAGCAGCAACGTATGGCGTTCTGGCGCATCGGCCAGTTTACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGTGCGGCACGCCAAACACCTg < 7:66471/149‑1 (MQ=255) tgtgTTGATCGAGCCAACTAAAACCCGCAGGTAGCGGATGATGATGCAGCAGCAGCAACGTATGGCGTTCTGGCGCATCGGCCAGTTTACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGTGCGGCACGCCAAACACCTgg < 7:448657/149‑1 (MQ=255) gtgtTGATCGAGCCAACTAAAACCCGCAGGTAGCGGATGATGATGCAGCAGCAGCAACGTATGGCGTTCTGGCGCATCGGCCa < 2:254094/83‑1 (MQ=255) gtgtTGATCGAGCCAACTAAAACCCGCAGGTAGCGGATGATGATGCAGCAGCAGCAACGTATGGCGTTCTGGCGCATCGGCCa > 1:254094/1‑83 (MQ=255) tgtTGATCGAGCCAACTACAACCCGCAGGTAGCGGATGATGATGCAGCAGCAGCAACGTATGGCGTTCTGGCGCATCGGCCAGTTTACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGTGCGGCACGCCAAACACCTgg < 2:57458/147‑1 (MQ=255) ttGATCGAGCCAACTAAAACCCGCAGGTAGCGGATGATGATGCAGCAGCAGCAACGTATGGCGTTCTGGCGCATCGGCCAGTTTACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGTGCGGCACGCCAAACACCTGGCTAt > 8:250760/1‑149 (MQ=255) gATCGAGCCAACTACAACCCGCAGGTAGCGCAACAACATCCAGCAGCACCAACGTAAAGCGTACTGCCGCATCGCCCAGAATACCAACCAGCCACACAAGCTAAAACTCCCACACCACACCCACCGCCACCCCAAACACCACGCTAAcc > 6:273515/1‑149 (MQ=255) aTCGAGCCAACTACAACCCGCAGGTAGCTGATGATGATGCAGCAGCAGCAACGTATGGCGTTCTGGCGCATAGGCCAGTTTACGTTCCAGAAACTCAAGCTGAAACTCgc > 6:177781/1‑110 (MQ=255) ccAACTAAAACCCGCAGGTAGCGGATGATGATGCAGCAGCAGCAACGTATGGCGTTCTGGCGCATCGGCCAGTTTACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGTGCGGCACGCCAAACACCTGGCTATCCAGCAACa < 5:121073/149‑1 (MQ=255) ccAACTAAAACCCGCAGGTAGCGGATGATGATGCAGCAGCAGCAACGTATGGCGTGCTGGCGCATCGGCCAGTTTACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGTGCGGCACGCCAAACACCTGGCTATCCAGCAACa < 2:120859/149‑1 (MQ=255) cAACTACAACCCGCAGGTAGCGGATGATGATGCAGCAGCAGCAACGTATGGCGTTCTGGCGCATCGGCCAGTTTACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGTGCGGCACGCCAAACACCTGGCTATCCAGCAACAg > 1:406183/1‑149 (MQ=255) cAACTAAAACCCGCAGGTAGCGGATGATGATGCAGCAGCAGCAACGTATGGCGTTCTGGCGCATCGGCCAGTTTACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGTGCGGCACGCCAAACACCTGGCTATCCAGCAACAg > 2:411221/1‑149 (MQ=255) cTACAACCCGCAGGTAGCGGATGATGATGCAGCAGCAGCAACGTATGGCGTTCTGGCGCATCGGCCAGTTTACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGTGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGAt > 2:158145/1‑149 (MQ=255) | GGCGTTGCCAGCAGGCGGCGACCATTCCAGTCGAGATCCAGCTCCTGATGAATATGACCGCACAGCAAGTATTTGACGTGCGGAAACTTCGCCAGCACGGTATCCAGTTCGCCCGCGTTACGCAGACTGTGTTGATCGAGCCAACTACAACCCGCAGGTAGCGGATGATGATGCAGCAGCAGCAACGTATGGCGTTCTGGCGCATCGGCCAGTTTACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGTGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGAT > NC_000913/3176172‑3176464 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |