| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,806,430 | C→A | 9.0% | R213L (CGC→CTC) | waaG ← | UDP‑glucose:(heptosyl)lipopolysaccharide alpha‑1,3‑glucosyltransferase; lipopolysaccharide core biosynthesis protein; lipopolysaccharide glucosyltransferase I |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,806,430 | 0 | C | A | 9.0% | 309.0 / 7.4 | 101 | R213L (CGC→CTC) | waaG | UDP‑glucose:(heptosyl)lipopolysaccharide alpha‑1,3‑glucosyltransferase; lipopolysaccharide core biosynthesis protein; lipopolysaccharide glucosyltransferase I |
| Reads supporting (aligned to +/- strand): ref base C (57/34); new base A (2/8); total (59/42) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.52e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 103 total aligned reads displayed.
ATTGCGACCGGAGAAGAAATGCACATTGCTCCGCACGCCGAGTTTTTCTGCCAGCGCTTCAAATTTTCGCGGCTTATCCTGACCAACAACAAATAAAAGCGTATTGTGACGTAATGATTCCGGTAACGATGCCAAAGCTTCAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTTTGTTGCTCTTTTATGCCATTTTTCTGGCGATAAATTTCACGGCTGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAAT > NC_000913/3806282‑3806578 | atTGCGACCGGAGAAGAAATGCACATTGCTCCGCACGCCGAGTTTTTCTGCCAGCGCTTCAAATTTTCGCGGCTTATCCTGACCAACAACAAATAAACGCGTATTGTGCCGTAATGCTTCCGGTACCGCTGCCAAAGCTTCAATTGAGc > 5:301871/1‑149 (MQ=255) cGACCGGAGAAGAAATGCACATTGCTCCGCACGCCGAGTTTTTCTGCCAGCGCTTCAAATTTTCGCGGCTTATCCTGACCAACAACAAATAAAAGCGTATTGTGACGTAATGGTTCCGGTAACGATGCCAAAGCTTCAATTGAGCGATc < 8:238849/149‑1 (MQ=255) cGACCGGAGAAGAAATGCACATTGCTCCGCACGCCGAGTTTTTCTGCCAGCGCTTCAAATTTTCGCGGCTTATCCTGACCAACAACAAATAAAAGCGTATTGTGACGTAATGATTCCGGTAACGATGCCAAAGCTTCAATTGAGCGAt < 3:193555/148‑1 (MQ=255) cGACCGGAGAAGAAATGCACATGGCTCCGCACGCCGAGATTTTCTGCCAGCGCCTCAAATTTTCGCGGCTTATCCTGACCAACAACAACTAAAAGCGTATTGTGACGTAATGATTCCGGTAACGATGCCAAAGCTTCAATTGAGCGAt < 2:84121/148‑1 (MQ=255) gCACATTGCTCCGCACGCCGAGTTTTTCTGCCAGCGCTTCAAATTTTCGCGGCTTATACTGACAAACAAAAAATAAAAGCGTATTGTGACGTAATGATTCCGGTAAAGATGCCAAAGCTTCAATTGAGAGATCTACACCTTTACGGcc > 5:372835/1‑148 (MQ=255) acaTTGCTCCGCACGCCGAGTTTTTCTGCCAGCGCTTCAAATTTTCGCGGCTTATCCTGACCAACAACAAATAAAAGCGTATTGTGACGTAATGATTCCGGTAACGATGCCAAAGCTTCAATTGAGCGATCTACACCTTTACGGCCaa > 2:327822/1‑148 (MQ=255) aatGCTCCGCACCCCGAGTGTTTCTGCCAGCTCCTCCAATTTTCGCGGCTTATCCTGACCCACAACAATTAAAAGCGTTTTGTGACGTATTGATTTTTTTTTTTTTTTGATAGGGTGAATTGAGAGATCTACACCTTTACGGCCAAAAt < 6:28372/147‑1 (MQ=255) aTTGCTCCGCACGCCGAGTTTTTCTGCCAGCGCTTCAAATTTTCGCGGCTTATCCTGACCAACAACAAATAAAAGCGTATTGTGACGTAATGATTCCGGTAACGATGCCAAAGCTTCAATTGAGCGATCTACACCTTTACGGCCAAAAt > 8:195267/1‑149 (MQ=255) aTTCCTCCGCAAGCCGAGATTTTCTGCCAGCGCTACAAATTTTCGCGGCTTATCCAGACAAACAACAAATAAAAGCGTATTATGACCTAATGAATCAGGTAACGATGCCAAAGATACAATTGAGCGATCTACACCTTTACGGCCaaaa > 6:85386/1‑148 (MQ=255) ttGCTCCGCACGCCGAGTTATTCTGCCATCGCTTCAAATTTACCCGGCTTATCCTGACCAACAACAAATAAAACCGTAATGTGACGTAATGATTCCTGTAACGATGCCAAAGCTTCAATTGAGCGATCTACACCTTTACGGCCAAAATc > 8:100726/1‑149 (MQ=255) cTCCGCACGCCGAGTTTTTGTGCCAGAGATTCAAATTTTCGCGGCTTATCCTGACCAACAACAAATAAAAGCGTATTGTTACTTAATGATTCCGGTAACGATGCCAAAGCTTCAATTGAGCGATCTACACCTTTACGGCCAAAATCTGa < 1:253615/149‑1 (MQ=255) tCCGCACGCCGAGTTTTTCTGCCAGCGCTTCAAATTTTCGCGGCTTATCCTGACCAACAACAAATAAAAGCGTATTGTGACGTAATGATTCCGGTAACGATGCCAAAGCTTCAATTGAGCGATCTACACATTTACGTCCAAAATCTGa > 3:221675/1‑148 (MQ=255) gCCGAGTTTTTCTGCCAGCGCTTCAAATTTTCGCGGCTTATCCTGACCAACAACAAATAAAAGCGTATTGTGACGTAATGATTCCGGTAACGATGCCAAAGCTTCAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCt > 8:8402/1‑149 (MQ=255) gCCGAGTTTTTCTGCCAGCGCTTCAAATTTTCGCGGCTTATCCTGACCAACAACAAATAAAAGCGTATTGTGACGTAATGATTCCGGTAACGATGCCAAAGCTTCAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCt > 8:315432/1‑149 (MQ=255) gCCGAGTTTTTCTGCCAGCGCTTCAAATTTTCGCGGCTTATCCTGACCAACAACAAATAAAAGCGTATTGTGACGTAATGATTCCGGTAACGATGCCAAAGCTTCAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCt > 8:153195/1‑149 (MQ=255) gAGTTTTTCTGCCAGCGCTTCAAATTTTCGCGGCTTATCCTGACCAACAACAAATTAAAGCGTATTGTGACGTAATGATTCCGGTAACGATGCCAAAGCTTCAATTGACCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCa < 5:85386/149‑1 (MQ=255) gTTTTTCTGCCAGCGCTTCAAATTTTCGCGGCTTATCCTGACCAACAACAAATAAAAGTGTATTGTGACGTAATGATTCCGGTAACGATGCCAAAGCTTCAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAg > 8:15530/1‑148 (MQ=255) cTGCCAGCGCTTCAAATTTTCGCGGCTTATCCTGACCAACAACAAATAAAAGCGTATTGTGACGTAATGATTCCGGTAACGATGCCAAAGCTGCAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGtaataa < 3:111240/148‑1 (MQ=255) ccAGCGCTTCAAATTTTCGCGGCTTATCCTGACCAACAACAAATAAAAGTGTATTGTGACGTAATGATTCCGGTAACGATGCCAAAGCTTCAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGttt < 7:15530/149‑1 (MQ=255) cAGCGCTTCAAATTTTCGCGGCTTATCCTGACCAACAACAAATAAAAGCGTATTGTGACGTAATGATTCCGGTAACGATGCCAAAGCTTCAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGtttt > 2:195071/1‑149 (MQ=255) aGCGCTTCAAATTTTCGCGGCTTATCCTGACCAACAACAAATAAAAGCGTATTGTGACGTAATGATTCCGGTAACGATGCCAAAGCTTCAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGtttgg > 3:278738/1‑147 (MQ=255) gcgcTTCAAATTTTCGCGGCTTATCCTGACCAACAACAAATAAAAGCGTATTGTGACGTAATGATTCCGGTAACGATGCCAAAGCTTCAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTttgt < 7:153195/149‑1 (MQ=255) gagcTTCAAATTTTCGCGGCTTATCCTGACCAACAACAAATAAAAGCGTATTGTGACGTAATGATTCCGGTAACGATGCCAAAGCTTCAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTttgt < 1:327822/147‑1 (MQ=255) ttCAAATTTTCGCGGCTTATCCTGACCAACAACAAATAAAAGCGTATTGTTACGTAATGATTCCGGTAACGATGCCAAAGCTTCAATTGAGAGATCTCCACCTTTACGGCCAAAATCTGAAACAACCTGAAGTAATAAGTTttgtttc > 4:24265/1‑146 (MQ=255) tCAAATTTTCGCGGCTTATCCTGACCAACAACAAATAAAAGCGTATTGTGACGTAATGATTCCGGTAACGATGCCAAAGCTTCAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGtaat > 6:250856/1‑135 (MQ=255) tCAAATTTTCGCGGCTTATCCTGACCAACAACAAATAAAAGCGTATTGTGACGTAATGATTCCGGTAACGATGCCAAAGCTTCAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGtaat < 5:250856/135‑1 (MQ=255) tCAAATTTTCGCGGCTTATCCTGACCAACAACAAATAAAAGCGTATTGTGACGTAATGATTCCGGTAACGATGCCAAAGCTTCAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTCCACTAATAAGTGTTGTTtctc > 6:19826/1‑149 (MQ=255) aaTTTTCGCGGCTTATCCTGACCAACAACAAATAAAAGCGTATTGTGACGTAATGATTCCGGTAACGATGCCAAAGCTTCAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTTTGTTGCTCttt < 7:98940/149‑1 (MQ=255) aaTTTTCGCGGCATATCCTGACCAACAACAAATAAAAGCGTATTGAGACGTAATGATTCCGGTAACGATGCCAAAGCTTCAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTTTGTTGCTCttt > 6:220532/1‑149 (MQ=255) ttttCGCGGCTTATCCTGACCAACAACAAATAAAAGCGTATTGTGACGTAATGATTCCGGTAACGATGCCAAAGCTTCAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTttg < 7:375969/138‑1 (MQ=255) ttttCGCGGCTTATCCTGACCAACAACAAATAAAAGCGTATTGTGACGTAATGATTCCGGTAACGATGCCAAAGCTTCAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTttg > 8:375969/1‑138 (MQ=255) cTTATCCTGACCAACAACAAATAAAAGCGTATTGTGACGTAATGATTCCGGTAACGATGCCAAAGCTTCAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAAc > 3:310976/1‑111 (MQ=255) tCCTGACCAACAACAAATAACAGCGTATTGTGACGTAATGATTCCGGTAACGATGCCAAAGCTTCAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTTTGTTGCTCTTTTATGCCATTTTTCTg < 7:369616/149‑1 (MQ=255) tCCTGACCAACAACAAATAAAAGCGTATTGTGACGTAATGATTCCGGTAACGATGCCAAAGCTTCAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTTTGTTGCTCTTTTATGCCATTTTTCTg > 4:141844/1‑149 (MQ=255) tCCTGACAAACAACAAATAAAATCGTATTGTGACGTAATGATTTTTTTTTTTTTTTGATAGGTTGAATTGAGAGATATACACCTTTACGGCCAAAATCTGATCAAACGTGCAGTAATAAGTTTTGTTGCTCTTTTATGCCATTTTTCt < 4:216042/148‑1 (MQ=255) ccTGACCAACAACAAATAAAAGCGTATTGTGACGTAATGATTCCGGTAACGATGCCAAAGCTTCAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTTTGTTGCTCTTTTATGCCATTTTTCTgg > 7:333288/1‑149 (MQ=255) cTGACCAACAACAAATAAAAGCGTATTGTGACGTAATGATTCCGGTAACGATGCCAAAGCTTCAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTTTGTTGCTCTTTTATGCCATTTTTCTgg < 7:315432/148‑1 (MQ=255) cTGACCAACAACAAATAAAAGCGTATTGTGACGTAATGATTCCGGTAACGATGCCAAAGCTTCAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTTTGTTGCTCTTTTATGCCATTTTTCTGGc > 7:80512/1‑149 (MQ=255) tGACCAACAACAAATAAAAGCGTATTGTGACGTAATGATTCCGGTAACGATGCCAAAGCTTCAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTTTGTTGCTCTTTTATGCCATTTTTCTg > 2:299554/1‑146 (MQ=255) tGACCAACAACAAATAAAAGCGTATTGTGACGTAATGATTCCGGTAACGATGCCAAAGCTTCAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTTTGTTGCTCTTTTATGCCATTTTTCTg < 1:299554/146‑1 (MQ=255) tGACCAACAACAAATAAAAGCGTATTGTGACGTAATGATTCCGGTAACGATGCCAAAGCTTCAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTTTGTTGCTATTTTATGCCATTTTTCTGGc > 5:305973/1‑148 (MQ=255) tGACCAACAACAAATAAAAGCGTATTGTGACGTAATGATTCCGGTAACGATGCCAAAGCTTCAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTATGTTGCTCTTTTATGCCATTTTTCTGGc > 1:139876/1‑148 (MQ=255) tGACCAACAACAAATAAAAGCGTATTGTGACGTAATGATTACGGTAACGATGCCAAAGCTTCAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTTTGTTGCTCTTTTATGCCATTTTTCTGGc > 7:180137/1‑148 (MQ=255) cctatcgcaacaaATAACAGCGTATTGTGACGTAATGATTTGTTTTTTTTTTTGATAGGTTGAATTGAGAGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTTTGTTGCTCTTTTATGCCATTTTTCTg < 2:261365/139‑1 (MQ=255) aacaacaaATAAAAGCGTATTGTGACGTAATGATTCCGGTAACGATGCCAATGCTTCAATTGAGCGATCTac < 6:29832/72‑1 (MQ=255) aacaacaaATAAAAGCGTATTGTGACGTAATGATTCCGGTAACGATGCCAAGGCTTCAATTGAGCGATCTac > 5:29832/1‑72 (MQ=255) aacaacaaATAAAAGCGTATTGTGACGTAATGATTCCGGTAACGATGCCAAAGCTTCAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTTTGTTGCTCTTTTATGCCATTTTTCTGGCGATaaa < 7:8402/149‑1 (MQ=255) aacaaATAAAAGCGTATTGTGACGTAATGATTCCGGTAACGATGCCAAAGCTTCAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTTTGTTGCTCTTTTATGCCATTTTTCTGGCGATAAAttt > 6:222042/1‑149 (MQ=255) aacaaATAAAAGCGTATTGTGACGTAATGATTCCGGTAACGATGCCAAAGCTTCAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTTTGTTGCTCTTTTATGCCATTTTTCTGGAGATaggaag > 1:261365/1‑144 (MQ=255) acaaATAAAAGCGTATTGTGACGTAATGATTCCGGTAACGATGCCAAAGCTTCAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTTTGTTGCTCTTTTATGCCATTTTTCTGGCGATAAAttt > 8:187273/1‑148 (MQ=255) acaaATAAAAGCGTATTGTGACGTAATGATTCCGGTAACGATGCCAAAGCTTCAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTTTGTTGCTCTTTTATGCCATTTTTCTGGCGATAAATTTc < 3:224150/149‑1 (MQ=255) aTAAAAGCGTATTGTGACGTAATGATTCCGGTAACGATGCCAAAGCTTCAATTGAGCGATCTACACCTTTACGGACAAAATCTGATCCAACCTGCAGTAATATGTTTTGTTGCTCTTTTATGCCATTTTTCTGGCGATAAATTTCACgg > 6:319028/1‑149 (MQ=255) tAAAAGCGTATTGTGACGTAATGATTCTTTTATAGATTTGAAAGCTTGAATTGAGAGATCTACACCTTTACGGCCAAAATCTGATCCAACCTg < 2:118427/93‑1 (MQ=255) tAAAAGCGTATTGTGACGTAATGATTCCGGTAACGATGCCAAAGCTTCAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTg > 1:118427/1‑93 (MQ=255) aaaaGCGTATTGTGACGTAATGCTTCCGGTAACGATGCCAAAGCTTCAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTTTGTTGCTCTTTTATGCCATTTTTCTGGCGATAAATTTGACGGCt > 3:238621/1‑149 (MQ=255) aaaaGCGTATTGTGACGTAATGATTCCGGTAACGATGCCAAAGCTTCAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTTTGTTGCTCTTTTATGCCATTTTTCTGGCGATAAATTTCACGGCt > 7:111600/1‑149 (MQ=255) aaaGCGTATTGTGACGTAATGATTCCGGTAACGATGCCAAAGCTTCAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTTTGTTGCTCtttt < 3:66616/116‑1 (MQ=255) aaaGCGTATTGTGACGTAATGATTCCGGTAACGATGCCAAAGCTTCAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTTTGTTGCTCtttt > 4:66616/1‑116 (MQ=255) aGCGTATTGTGACGTAATGATTCCGGTAACGATGCCAAAGCTTCAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTTTGTTGCTCTTTTATGCCATTTTTCTGGCGATAAATTTCACGGCTGtt > 6:245293/1‑149 (MQ=255) ttGTGACGTAATGATTCCGGTAACGATGCCAAAGCTTCAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTTTGTTGCTCTTTTATGCCATTTTGCTGGCGATAAATTTCACGGCTGTTTGGGa < 1:195071/148‑1 (MQ=255) tgACGTAATGATTCCGGTAACGATGCCAAAGCTTCAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTTTGTTGCTCTTTTATGCCATTTTTCTGGCGATAAATTTCACGGCTGTTTGGGATTTg < 5:245293/149‑1 (MQ=255) gccGTAATGATTCCGGTAACGATGCCAAAGCTTCAATTGAGCGATCTACACCTTTACGGCAAAAATCTGATCCAACGTGCAGTAATAAGTTTTGTTGCTCTTTTATGCCATTTTTCTGGCGATAAATTTCACGGCTGTTTGGGATTTGc > 7:268448/3‑149 (MQ=255) gTAATGATTCCGGTAACGATGCCAAAGCTTCAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTTTGTTGCTCTTTTATGCCATTTTTCTGGCGATAAATTTCACGGCTGTTTGGGATTTGCTCa > 3:97358/1‑149 (MQ=255) gTAATGATTCCGGTAACGATGCCAAAGCTTCAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTTTGTTGCTCTTTTATGCCATTTTTCTGGCGATAAATTTCACGGCTGTTTGGGATTTGCTCa > 2:319073/1‑149 (MQ=255) tAATGATTCCGGTAACGATGCCAAAGCTTCAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTTTGTTGCTCTTTTATGCCATTTTTCTGGCGATAAATTTCACGGCTGTTTgg < 5:97695/138‑1 (MQ=255) tAATGATTCCGGTAACGATGCCAAAGCTTCAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTTTGTTGCTCTTTTATGCCATTTTTCTGGCGATAAATTTCACGGCTGTTTgg > 6:97695/1‑138 (MQ=255) aaTGATTCCGGTAACGATGCCAAAGCTTCAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTTTGTTGCTCTTTTATGCCATTTTTCTGGCGATAAATTTCACGGCTGTTTGGGATTTGCTCACt > 6:154662/1‑149 (MQ=255) aaTGATTCCGGTAACGATGCCAAAGCTTCAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTTTGTTGCTCTTTTATGCCATTTTTCTGGCGATAAATTTCACGGCTGTTTGGGATTTGCTCACt > 2:374632/1‑149 (MQ=255) aaTGATTCCGGTAACGATGCCAAAGCTTCAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTTTGTTGCTCTTTTATGCCATTTTTCTGGCGATAAATTTCACGGCTGTTTGGGATTTGCTCACt > 8:3710/1‑149 (MQ=255) aTGATTCCGGTAACGATGCCAAAGCTTCAATTGAGCGATCTACACCTTTACGGCCTAAATCTTATCCAACCTGCAGTAATAAGTTTTGTTGCGCTTTTCTGCCATTTTTCTGGCGATAAATTTCACGGCTGTTTGGGATTTGCTCACt < 7:100726/148‑1 (MQ=255) aTTCCGGTAACGATGCCAAAGCTTCAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTTTGTTGCTCTTTTATGCCATTTTTCTGGCGATAAATTTCACGGCTGTTTGGGATTTGCTCACTGTAt > 5:1198/1‑149 (MQ=255) tggTAACGATGCCAAAGCTTCAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTttgt > 8:372888/2‑82 (MQ=255) tggTAACGATGCCAAAGCTTCAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTttgt < 7:372888/81‑1 (MQ=255) gTAACGATGCCAAAGCTTCAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTTTGTTGCTCTTTTATGCCATTTTTCTGGCGATAAATTTCACGGCTGTTTGGGATTTGCTCACTGTATTTTCTg > 7:340769/1‑149 (MQ=255) gTAACGATGCCAAAGCTTCAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTTTGTTGCTCTTTTATGCCATTTTTCTGGCGATAAATTTCACGGCTGTTTGGGATTTGCTCACTGTATTTTCTg > 3:196525/1‑149 (MQ=255) ctattccAAAGGTTGAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTTTGTTGCTCTTTTATGCCATTTTTCTGGCGATAAATTTCACGGCTGTTTGGGATTTGCTCACTGTATTTTCTGTcc < 8:268448/143‑1 (MQ=255) gATGCCAAAGCTTCAATTGAGCGATCTACTCCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTTTGTTGCTCTTTTATGCCATTTTTCTGGCGATAAATTTCACGGCTGTTTGGGATTTGCTCACTGTATTTTCTGTCCg > 1:182695/1‑148 (MQ=255) gATGCCAAAGCTTCAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTTTGTTGCGCTTGTATGCCAGTTTTCTGGCGATAAATTTCACGGCTGTTTGGGATTTGCTCACTGTATTTTCTGTCCg > 5:327148/1‑148 (MQ=255) cAAAGCTTCAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTTTGTTGCTCTTTTATGCCATTTTTCTGGCGATAAATTTCACGGCTGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATaaa > 7:161170/1‑149 (MQ=255) cAAAGCTTCAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTTTGTTGCTCTTTTATGCCATTTTTCTGGCGATAAATTTCACGGCTGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATaaa > 6:249970/1‑149 (MQ=255) cAAAGCTTCAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTTTGTTGCTCTTTTATGCCATTTTTCTGGCGATAAATTTCACGGCAGTTTGGGATTTGCTCACTGTAATTTCTGTCCGGATaaa > 8:326324/1‑149 (MQ=255) aaaGCTTCAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTTTGTTGCTCTTTTATGCCATTTTTCTGGCGATAAATTTCACGGCTGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATaaa > 6:256975/1‑148 (MQ=255) taGCTTGAATTGAGAGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTTTGTTGCTCTTTTATGCCATTTTTCTGGCGATAAATTTCACGGCTGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATa < 4:278738/148‑1 (MQ=255) aGCTTCAATTGAGAGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTTTGTTGCTCTTTTATGCCATTTTTCTGGCGATAAATTTCACGGCTGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATAc < 8:333288/149‑1 (MQ=255) gCTTCAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTTTGTTGCTCTTTTATGCCATTTTTCTGGCGATAAATTTCACGGCTGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATAcc < 5:154662/149‑1 (MQ=255) cTTCAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGAAATAAGTTTTGTTGCTCTTTTATGCCATTTTTCTGGCGATAAATTTCACGGCTGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCg < 5:19826/149‑1 (MQ=255) ttgaaTTGAGAGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTTTGTTGCTCTTTTATGCCATTTTTCTGGCGATAAATTTCACGGCTGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCg < 6:372835/145‑1 (MQ=255) ttCAATTGAGCGATCTACACCTTTACGGACAAAATATGATCCAACCTGAAGTAATAAGTTTTGTTGCTCTTTTATGCCATTTTTCTGTCGATAAATTTAACGGATGTTTGGGATTTGATCACTGTATTTTCTGTCCGGATAAATACCgg > 7:333498/1‑149 (MQ=255) cAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTTTGTTGCTCTTTTATGCCATTTTTCTGGCGATAAATTTCACGGCTGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCggg < 7:3710/148‑1 (MQ=255) aaTTGAGCGATCTACACCTTTATGGCCAAAATCTGTTACAAACTGCAGTAATAAGTTTTGTTGGTCTTTTATGCCATTTTTCTGGCGATAAATTTCACGGCTGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGCTAAATACCGgga < 3:24265/148‑1 (MQ=255) aaTTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTTTGTTGCTCTTTTATGCCATTTTTCTGGCGATAAATTTCACGGCTGTTTgg < 2:232953/108‑1 (MQ=255) aaTTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTTTGTTGCTCTTTTATGCCATTTTTCTGGCGATAAATTTCACGGCTGTTTgg > 1:232953/1‑108 (MQ=255) aaTTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTTTGTTGCTCTTTTATGCCATTTTTCTGGCGATAAATTTCACGGCTGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGggag < 5:220532/149‑1 (MQ=255) aaTTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTTTGTTGCTCTTTTATGCCATTTTTCTGGCGATAAATTTCACGGCTGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGggag < 7:187273/149‑1 (MQ=255) aaTTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTTTGTTGCTCTTTTATGCCATTTTTCTGGCGATAAATTTCACGGCTGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGgga < 6:1198/148‑1 (MQ=255) aTTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTTTGTTGCTCTTTTATGCCATTTTTCTGGCGATAAATTTCACGGCTGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGggag > 2:249256/1‑148 (MQ=255) aTTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTTTGTTGCTCTTTTATGCCATTTTTCTGGCGATAAATTTCACGGCTGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGggag > 6:23272/1‑148 (MQ=255) aGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTTTGTTGCTCTTTTATGCCATTTTTc < 8:289816/77‑1 (MQ=255) aGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTTTGTTGCTCTTTTATGCCATTTTTc > 7:289816/1‑77 (MQ=255) cGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTTTGTTGCTCTTTTATGCCATTTTTCTGGCGATAAATTTCACGGCTGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAAt < 5:222042/149‑1 (MQ=255) | ATTGCGACCGGAGAAGAAATGCACATTGCTCCGCACGCCGAGTTTTTCTGCCAGCGCTTCAAATTTTCGCGGCTTATCCTGACCAACAACAAATAAAAGCGTATTGTGACGTAATGATTCCGGTAACGATGCCAAAGCTTCAATTGAGCGATCTACACCTTTACGGCCAAAATCTGATCCAACCTGCAGTAATAAGTTTTGTTGCTCTTTTATGCCATTTTTCTGGCGATAAATTTCACGGCTGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAAT > NC_000913/3806282‑3806578 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |