| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3226187 | 104 (1.190) | 3 (0.040) | 3/240 | NT | 3.0% | intergenic (+16/‑47) | ebgC/ygjI | evolved beta‑D‑galactosidase, beta subunit; cupin superfamily/putative transporter |
| ? | NC_000913 | = 3226192 | 99 (1.210) | intergenic (+21/‑42) | ebgC/ygjI | evolved beta‑D‑galactosidase, beta subunit; cupin superfamily/putative transporter | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
CGGAGAAACCGTTGAGGTCCACGAAGGGCAAATCGTTATTTGCGATATCCATGAAGCGTATCGGTTTATCTGCAATAACGCGGTCAAAAAAGTGGTTCTCAAAGTCACCATCGAAGATGGTTATTTCCATAACAAATAACAACTACGGCGGCAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3226033‑3226187‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcggcaaaCTCCTTTTGCCGCCGTAGTTGTTATTTGTTATGGAAATAACCATCTTCGATGGTGACTTTGAGAACCACTTTTTTGACCGCGTTATTGCAGATAAACCGATACGCTTCATGGATATCGCAAATAACGATTTGCCCTTCGTGGA < NC_000913/3226192‑3226050 CGGAGAAACCGTTGAGGTCCACGAAGGGCAAATCGTTATTTGCGATATCCATGAAGCGTATCGGTTTATCTGCAATAACGCGGTCAAAAAAGTGGTTCTCAAAGTCACCATCGAAGATGGTTATTTCCATAACAAATAACAACTACGGC < 7:329005/149‑1 AGAAACCGTTGAGGTCCACGAAGGGCAAATCGTTATTTGCGATATCCATGAAGCGTATCGGTTTATCTGCAATAACGCGGTCAAAAAAGTGGTTCTCAAAGTCACCATCGAAGATGGTTATTTCCATAACAAATAACAACTACGGCGGC < 4:289803/149‑1 AAACCGTTGAGGTCCACGAAGGGCAAATCGTTATTTGCGATATCCATGAAGCGTATCGGTTTATCTGCAATAACGCGGTCAAAAAAGTGGTTCTCAAAGTCACCATCGAAGATGGTTATTTCCATAACAAATAACAACTACGGCGGCA > 5:145261/1‑148 AAACCGTTGAGGTCCACGAAGGGCAAATCGTTATTTGCGATATCCATGAAGCGTATCGGTTTATCTGCAATAACGCGGTCAAAAAAGTGGTTCTCAAAGTCACCATCGAAGATGGTTATTTCCATAACAAATAACAACTACGGCGGCA > 5:97895/1‑148 CATCGAAGATGGTTATTTCCATAACAAATAACAACTACGGCGGCAAAAGGAGTTTGCCGCCGTAGTTGTTATTTGTTATGGAAATAACCATCTTCGATGGTGACTTTGAGAACCACTTTTTTGACCGCGTTATTGCAGATAAACCGATA > 6:360539/1‑149 ACAAATAACAACTACGGCGGCAAAAGGAGTTTGCCGCCGTAGTTGTTATTTGTTATGGAAATAACCATCTTCGATGGTGACTTTGAGAACCACTTTT < 5:121609/97‑1 ACAAATAACAACTACGGCGGCAAAAGGAGTTTGCCGCCGTAGTTGTTATTTGTTATGGAAATAACCATCTTCGATGGTGACTTTGAGAACCACTTTT > 6:121609/1‑97 GCGGCAAACTCCTTTTGCCGCCGTAGTTGTTATTTGTTATGGAAATAACCATCTTCGATGGTGACTTTGAGAACCACTTTTTTGACCGCGTTATTGCAGATAAACCGATACGCTTCATGGATATCGCAAATAACGATTTGCCCTTCGTG < 3:50238/149‑1 GGCAAACTCCTTTTGCCGCCGTAGTTGTTATTTGTTATGGAAATAACCATCTTCGATGGTGACTTTGAGAACCACTTTTTTGACCGCGTTATTGCAGATAAACCGATACGCTTCATGGATATCGCAAATAACGATTTGCCCTTC > 7:276482/1‑144 GGCAAACTCCTTTTGCCGCCGTAGTTGTTATTTGTTATGGAAATAACCATCTTCGATGGTGACTTTGAGAACCACTTTTTTGACCGCGTTATTGCAGATAAACCGATACGCTTCATGGATATCGCAAATAACGATTTGCCCTTC < 8:276482/144‑1 GGCAAACTCCTTTTGCCGCCGTAGTTGTTATTTGTTATGGAAATAACCATCTTCGATGGTGACTTTGAGAACCACTTTTTTGACCGCGTTATTGCAGATAAACAGATACGCTTCATGGATATAGCAAATAACGATTTGCCATTCGTGGA > 7:411323/1‑149 CGGAGAAACCGTTGAGGTCCACGAAGGGCAAATCGTTATTTGCGATATCCATGAAGCGTATCGGTTTATCTGCAATAACGCGGTCAAAAAAGTGGTTCTCAAAGTCACCATCGAAGATGGTTATTTCCATAACAAATAACAACTACGGCGGCAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3226033‑3226187‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcggcaaaCTCCTTTTGCCGCCGTAGTTGTTATTTGTTATGGAAATAACCATCTTCGATGGTGACTTTGAGAACCACTTTTTTGACCGCGTTATTGCAGATAAACCGATACGCTTCATGGATATCGCAAATAACGATTTGCCCTTCGTGGA < NC_000913/3226192‑3226050 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |