| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,412,639 | T→A | 5.3% | intergenic (‑45/+38) | yfbU ← / ← yfbV | UPF0304 family protein/UPF0208 family inner membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,412,639 | 0 | T | A | 5.3% | 311.8 / 5.6 | 95 | intergenic (‑45/+38) | yfbU/yfbV | UPF0304 family protein/UPF0208 family inner membrane protein |
| Reads supporting (aligned to +/- strand): ref base T (43/47); new base A (3/2); total (46/49) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.71e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.39e-01 | |||||||||||
TTGTTTGCAGGCGACGGTAACGTTCAGCATTTGCCGGATCGAGCATAGTCATCATCTTGTACTGATTAGACAAAATAAGACGTTGCGCGTTGGTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAGGGGTCAATTACAAATCATCAAGGAAAGTTTTATCCAGTTGTTTGAAGGCGCGCTTAAGCGTGTCAGCTAATGCCTGGTAATCAGGCTTGCCTTCAACGGGTGCCAACACCT > NC_000913/2412492‑2412780 | ttGTTTGCAGGCGACGGTAACGTTCAGCATTTGCCGGATCGAGCATAGTCATCATCTTGTACTGATTAGACAAAATAAGACGTTGCGCGTTGGTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑AAAAAAAAGAAGGCt > 4:135600/1‑148 (MQ=255) aGGCGACGGTAACGTTCAGCATTTGCCGGATCGAGCATAGTCATCATCTTGTACTGATTAGACAAAATAAGACGTTGCGCGTTGGTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑AAAAAAAAGAAGGCTGAGTATGcc < 7:291915/149‑1 (MQ=255) aGGCGACGGTAACGTTCAGCATTTGCCGGATCGAGCATAGACATCATCTTGTACTGATTAGACAAAATAAGACGTTGCGCGTTGGTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑AAAAAAAAGACGGCTGAGTATgac > 5:8985/1‑147 (MQ=255) gCGACGGTAACGTTCAGCATTTGCCGGATCGAGCATAGTCATCATCTTGTACTGATTAGACAAAATAAGACGTTGCGCGTTGGTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑AAAAAAAAGAAGGCTGAGTATGCctt > 3:268339/1‑149 (MQ=255) cGACGGTAACGTTCAGCATTTGCCGGATCGAGCATAGTCATCATCTTGTACTGATTAGACAAAATAAGACGTTGCGCGTTGGTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑AAAAAAAAGAAGGCTGAGTATGCcttc < 3:140440/149‑1 (MQ=255) ggTAACGTTCAGCATTTTCCGGATCGAGCATAGTCATCATCTTGTACTGATTAGACAAAATAAGACTTTGCGCGTTGTTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑AAAAAAAAGAAGGCTGAGTATGCCTTCtttt < 1:386738/149‑1 (MQ=255) ggTAACGTTCAGCATTTGCCGGATCGAGCATAGTCATCATCTTGTACTGATTAGACAAAATAAGACGTTGCGCGTTGGTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑AAAAAAAAGAAGGCTGAGTATGCCTTCtttt < 7:101100/149‑1 (MQ=255) tAACGTTCAGCATTTGCCGGATCGAGCATAGTCATCATCTTGTACTGATTAGACAAAATAAGACGTTGCGCGTTGGTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTtat < 7:385978/149‑1 (MQ=255) tAACGTTCAGCATTTGCCGGATCGAGCATAGTCATCATCTTGTACTGATTAGACAAAATAAGACGTTGCGCGTTGGTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTta > 1:415072/1‑148 (MQ=255) aCGTTCAGCATTTGCCGGATCGAGCATAGTCATCATCTTGTACTGATTAGACAAAATAAGACGTTGCGCGTTGGTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑AAAAAAAAGAAGGCTGAGTATGCCTTCtttt < 1:25723/145‑1 (MQ=255) aCGTTCAGCATTTGCCGGATCGAGCATAGTCATCATCTTGTACTGATTAGACAAAATAAGACGTTGCGCGTTGGTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑AAAAAAAAGAAGGCTGAGTATGCCTTCtttt > 2:25723/1‑145 (MQ=255) aCGTTCAGCATTTGCCGGATCGAGCATAGTCATCATCTTGTACTGATTAGACAAAATAAGACGTTGCGCGTTGGTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTtata < 2:415072/148‑1 (MQ=255) aCGTTCAGCATTTGCCGGATCGAGCATAGTCATCATCTTGTACTGATTAGACAAAATAAGACGTTGCGCGTTGGTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTatat < 3:257020/149‑1 (MQ=255) aGCATTTGCCGGATCGAGCATAGTCATCATCTTGTACTGATTAGACAAAATAAGACGTTGCGCGTTGGTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTaa > 4:163194/1‑149 (MQ=255) aGCATTTGCCGGATCGAGCATAGTCATCATCTTGTACTGATTAGACAAAATAAGACGTTGCGCGTTGGTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTaa < 3:135600/149‑1 (MQ=255) gCATTTGCCGGATCGAGCATAGTCATCATCTTGTACTGATTAGACAAAATAAGACGTTGCGCGTTGGTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTAAt > 1:51705/1‑149 (MQ=255) gCCGGATCGAGCATAGTCATCATCTTGTACTGATTAGACAAAATAAGACGTTGCGCGTTGGTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAgggg > 1:37467/1‑149 (MQ=255) cGGATCGAGCATAGTCATCATCTTGTACTGATTAGACAAAATAAGACGTTGCGCGTTGGTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTGAAAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAGGGGt > 8:53856/1‑149 (MQ=255) aTAGTCATCATCTTGTACTGATTAGACAAAATAAGACGTTGCGCGTTGGTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAGGGGTCAATTACAAat > 1:325732/1‑149 (MQ=255) catcatCTTGTACTGATTAGACAAAATAAGACGTTGCGCGTTGGTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAGGGGTCAATTACAAatcatc > 6:55648/1‑148 (MQ=255) atcatcTTGTACTGATTAGACAAAATAAGACGTTGCGCGTTGGTCATTTCCATTGTTGACTCCTGTATCACTCTACTGCGGTG‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAGGGGTCAATTACAAAtcatca < 4:34060/148‑1 (MQ=255) atcatcTTGTACTGATTAGACAAAATAAGACGTTGCGCGTTGGTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTtata > 5:45513/1‑117 (MQ=255) atcatcTTGTACTGATTAGACAAAATAAGACGTTGCGCGTTGGTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTtata < 6:45513/117‑1 (MQ=255) atcatcTTGTACTGATTAGACAAAATAAGACGTTGCGCGTTGGTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAGGGGTCAATTACAAatcatc > 6:114545/1‑147 (MQ=255) atcatcTTGTACTGATTAGACAAAATAAGACGTTGCGCGTTGGTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAGGGGTCAATTACAAatcatc > 7:15978/1‑147 (MQ=255) tcatcTTGTACTGATTAGACAAAATAAGACGTTGCGCGTTGGTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAGGGGTCAATTACAAATCATCAAg < 7:20612/149‑1 (MQ=255) catcTTGTACTGATTAGACAAAATAAGACGTTGCGCGTTGGTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTta < 6:55391/113‑1 (MQ=255) catcTTGTACTGATTAGACAAAATAAGACGTTGCGCGTTGGTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTta > 5:55391/1‑113 (MQ=255) catcTTGTACTGATTAGACAAAATAAGACGTTGCGCGTTGGTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAGGGGTCAATTACAAATCATCAAg > 2:262628/1‑148 (MQ=255) cTGATTAGACAAAATAAGACGTTGCGCGTTGGTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAGGGGTCAATTACaa < 4:26734/130‑1 (MQ=255) cTGATTAGACAAAATAAGACGTTGCGCGTTGGTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAGGGGTCAATTACaa > 3:26734/1‑130 (MQ=255) cTGATTAGACAAAATAAGACGTTGCGCGTTGGTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAGGGGTCAATTACAAATCATCAAGGAAAGtttt < 8:349964/148‑1 (MQ=255) cTGATTAGACAAAATAAGACGTTGCGCGTTGGTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAGGGGTCAATTACAAATCATCAAGGAAAGTTTTa < 8:303581/149‑1 (MQ=255) ttAGACAAAATAAGACGTTGCGCGTTGGTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAGGGGTCAATTACAAATCATCAAGGAAAGTTTTATCCa < 1:262628/149‑1 (MQ=255) aGACAAAATAAGACGTTTAGAGTTGGTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑AAAAAAAAGAAGGCTGAGTATTCCTTCTTTTATATGAGTAATCAGGGGTCAATTACAAATCATCAAGGAAAGTTTTATCCAg < 8:194390/148‑1 (MQ=255) gACAAAATAAGACGTTGCGCGTTGGTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAggg < 5:307196/112‑1 (MQ=255) gACAAAATAAGACGTTGCGCGTTGGTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAggg > 6:307196/1‑112 (MQ=255) gACAAAATAAGACGTTGCGCGTTGGTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAGGGGTCAATTACAAATCATCAAGGAAAGTTTTATCCAgtt > 7:270842/1‑149 (MQ=255) gACAAAATAAGACGTTGCGCGTTGGTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAGGGGTCAATTACAAATCATCAAGGAAAGTTTTATCCAgtt > 7:249769/1‑149 (MQ=255) aaaaTAAGCCGTTGCGCGTTGGTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑AAAAAAAAGAAGGCATACTCAGCcttctt < 6:124346/91‑1 (MQ=38) aaaaTAAGCCGTTGCGCGTTGGTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑AAAAAAAAGAAGGCATACTCAGCcttctt > 5:124346/1‑91 (MQ=38) aaaaTAAGACGTTGCGCGTTGGTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGTTG‑AAAAAAAAGAAGGCATACTCAGCcttctt < 6:118844/91‑1 (MQ=38) aaaaTAAGACGTTGCGCGTTGGTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAGGGGTCAATTACAAATCATCAAGGAAAGTTTTATCCAgttgtt > 8:31259/1‑149 (MQ=255) aaaaTAAGACGTTGCGCGTTGGTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑AAAAAAAACAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAGGGGTCAATTACAAATCATCAAGGAAAGTTTTATCCAgttgtt > 2:301425/1‑149 (MQ=255) aaaaTAAGACGTTGCGCGTTGGTCATTTCCATTGTTGACTCCTGTATCACTCTACTAAGGTG‑AAAAAAAAGAAGGCATACTCAGCcttctt > 5:118844/1‑91 (MQ=38) aaaTAAGACGTTGCGCGTTGGTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAGGGGTCAATTACAAATCATCAAGGAAAGTTTTATCCAGTTGttt < 8:270842/149‑1 (MQ=255) tAAGACGTTGCGCGTTGGTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAGGGGTCAATTACAAatcatc > 1:264951/1‑122 (MQ=255) tAAGACGTTGCGCGTTGGTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAGGGGTCAATTACAAatcatc < 2:264951/122‑1 (MQ=255) tAAGACGTTGCGCGTTGGTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAGGGGTCAATTACAAATCATCAAGGAAAGTTTTATCCAGTTGTTTGaa < 8:59577/149‑1 (MQ=255) aGACGTTGCGCGTTGGTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAGGGGTCAATTACAAATCATCAAGGAAAGTTTTATCCAGTTGTTTGAAgg > 6:276127/1‑149 (MQ=255) aGACGTTGCGCGTTGGTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGAGTAATCAGGGGTCAATTACAAATCATCAAGGAAAGTTTTATCCAGTTGTTTGAAg < 8:304651/148‑1 (MQ=255) gTTGCGCGTTGGTCATTTCCATAGTTGACTCCTGTATCACTCTACTACGGTG‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAGGGGTCAATTACAAATCATCAAGGAAAGTTTTATCCAGTTGTTTGAAGgcgcg > 1:362437/1‑149 (MQ=255) cgcgTTGGTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAGGGGGCAATTACAAATCATCAAGGAAAGTTTTATCCAGTTGTTTGAAGGCGCGCTTa < 2:325732/149‑1 (MQ=255) gcgTTGGTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAGGGGTCAATTACAAATCATCAAGGAAAGTTTTATCCAGTTGTTTGAAGGCGCGCTTaa < 5:308352/149‑1 (MQ=255) gcgTTGGTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAGGGGTCAATTACAAATCATCAAGGAAAGTTTTATCCAGTTGTTTGAAGGCGCGCTTaa < 2:362437/149‑1 (MQ=255) gTTGGTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAGGGGTCAATTACAAATCATCAAGGAAAGTTTTATCCAGTTGTTTGAAGGCGCGCTTAAGc > 5:40833/1‑149 (MQ=255) ggTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAGGGGTCAATTACAAATCATCAAGGaaa > 5:347395/1‑113 (MQ=255) ggTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAGGGGTCAATTACAAATCATCAAGGaaa < 6:347395/113‑1 (MQ=255) ggTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAGGGGTCAATTACAAATCATCAAGGAAAGTTTTATCCAGTTGTTTGAAGGCGCGCTTAAGCgtg > 1:15286/1‑149 (MQ=255) ggTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAGGGGTCAATTACAAATCATCAAGGAAAGTTTTATCCAGTTGTTTGAAGGCGCGCTTAAGCgt < 8:249769/148‑1 (MQ=255) tCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAGGGGTCAATTACAAATCATCAAGGAAAGTTTTATCCAGTTGTTTGAAGGCGCGCTTAAGCgtgt > 2:104135/1‑148 (MQ=255) tCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAGGGGTCAATTACAAATCATCAAGGAAAGTTTTATCCAGTTGTTTGAAGGCGCGCTTAAGCGTGTc > 8:386605/1‑149 (MQ=255) ccATTGTTGACTCCTGTATCACTCTACTACGGTG‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAGGGGTCAATTACAAATCATCAAGGAAAGTTTTATCCAGTTGTTTGAAGGCGCGCTTAAGCGTGTCAGCTaa > 7:230220/1‑149 (MQ=255) ttgACTCCTGTATCACTCTACTACGGTG‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAGGGGTCAATTACAAATCATCAAGGAAAGTTTTATCCAGTTGTTTGAAGGCGCGCTTAAGCGTGTCAGCTAATGCCTg < 4:268339/149‑1 (MQ=255) cTCCTGTATCACTCTACTACGGTG‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAGGGGTCAATTACAAATCATCAAGGAAAGt > 5:212286/1‑97 (MQ=255) cTCCTGTATCACTCTACTACGGTG‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAGGGGTCAATTACAAATCATCAAGGAAAGt < 6:212286/97‑1 (MQ=255) tCCTGTATCACTCTACTACGGTG‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAGGGGTCAATTACAAATCATCAAGGAAAGTTTTATCCAGTTGTTTGAAGGCGCGCTTAAGCGTGTCAGCTAATGCCTGGTaa > 7:317447/1‑148 (MQ=255) cTGTATCACTCTACTACGGTG‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAGGGGTCAATTACAAATCATCAAGGAAAGTTTTATCCAgttgt < 1:243194/107‑1 (MQ=255) cTGTATCACTCTACTACGGTG‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAGGGGTCAATTACAAATCATCAAGGAAAGTTTTATCCAgttgt > 2:243194/1‑107 (MQ=255) cTGTATCACTCTACTACGGTG‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAGGGGTCAATTACAAATCATCAAGGAAAGTTTTATCCAGTTGTTTGaa < 1:298053/112‑1 (MQ=255) cTGTATCACTCTACTACGGTG‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAGGGGTCAATTACAAATCATCAAGGAAAGTTTTATCCAGTTGTTTGaa > 2:298053/1‑112 (MQ=255) cTGTATCACTCTACTACGGTG‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAGGGGTCAATTACAAATCATCAAGGAAAGTTTTATCCAGTTGTTTGAAGGCGCGCTTAAGCGTGTCAGCTAATGCCTGGTAAt > 3:138469/1‑147 (MQ=255) cTGTATCACTCTACTACGGTG‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAGGGGTCAATTACAAATCATCAAGGAAAGTTTTATCCAGTTGTTTGAAGGCGCGCTTAAGCGTGTCAGCTAATGCCTGGTAAt > 4:29811/1‑147 (MQ=255) aCTCTACTACGGTG‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAGGGGTCAATTACAAATCATCAAGGAAAGTTTTATCCAGTTGTTTGAAGGCGCGCTTAAGCGTGTCAGCTAATGCCTGGTAATCAGGCTTGc < 4:138469/149‑1 (MQ=255) aCTCTACTAAGTTG‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAGGTGTCAATTACAAATCATCAAGGAAAGTTTTATCCAGTTGTTTGAAGGCGCGCTTAAGCGTGTCAGCTAATGCCTGGTAATCAGGCTTGc < 3:88279/149‑1 (MQ=255) ctctACTACGGTGAAAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAGGGGTCAATTACAAATCATCAAGGAAAGTTTTATCCAGTTGTTTGAAGGCGCGCTTAAGCGTGTCAGCTAATGCCTGGTAATCAGGCTTGc < 7:53856/149‑1 (MQ=255) ctctAATACGGTG‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAGGGGTCAATTACAAATCATCAAGGAAAGTTGTATCCAGTTGTTTGAAGGCGCGCTTAAGCGTGTCAGCTAATGCCTGATTACCAGGcattag < 2:309478/149‑6 (MQ=255) tctACTACGGTG‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAGGGGTCAATTACAAATCATCAAGGAAAGTTTTATCCAGTTGTTTGAAGGCGCGCTTAAGCGTGTCAGCTAATGCCTGGTAATCAGGCTTGCCt > 1:122124/1‑149 (MQ=255) tactacTGTG‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAGGGGTCAATTACAAATCATCAAGGAAAGTTTTATCCAGTTGTTTGAAGGCGCGCTTAAGCGTGTCAGCTAATGCCTGGTAATCAGGCTTGCCTTc < 8:317447/149‑1 (MQ=255) tactacGGTG‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAGGGGTCAATTACAAATCATCAAGGAAAGTTTTATCCAGTTGTTTGAAGGCGCGCTTAAGCGTGTCAGCTAATGCCTGGTAATCAGGCTTGCCt < 8:348707/147‑1 (MQ=255) ctacGGTG‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAGGGGTCAATTACAAATCATCAAGGAAAGTTTTATCCAGTTGTTTGAAGGCGCGCTTAAGCGTGTCAGCTAATGCCTGGTAATCAGGCTTGCCTTCaa < 2:122124/149‑1 (MQ=255) ctacGGTG‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAGGGGTCAATTACAAATCATCAAGGAAAGTTTTATCCAGTTGTTTGAAGGCGCGCTTAAGCGTGTCAGCTAATGCCTGGTAATCAGGCTTGCCTTCaa < 8:15978/149‑1 (MQ=255) tacGGTG‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAGGGGTCAATTACAAATCATCAAGGAAAGTTTTATCCAGTTGTTTGAAGGCGCGCTTAAGCGTGTCAGCTAATGCCTGGTAATCAGGCTTGCCTTCAAc > 1:400124/1‑149 (MQ=255) cGGTG‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAGGGGTCAATTACAAATCATCAAGGAAAGTTTTATCCAGTTGTTTGAAGGCGCGCTTAAGCGTGTCAGCTAATGCCTGGTAATCAGGCTTGCCTTCAAc < 7:31259/147‑1 (MQ=255) cGGTG‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAGGGGTCAATTACAAATCATCAAGGAAAGTTTTATCCAGTTGTTTGAAGGCGCGCTTAAGCGTGTCAGCTAATGCCTGGTAATCAGGCTTGCCTTCAACgg < 5:114545/149‑1 (MQ=255) cGGTG‑AAAAAAAAGAAGGCTGAGTATGCCTGCTTTTATATGCGTAATCAGGGGTCAATTACAAATCATCAAGGAAAGTTTTATCCAGTTGTTTGAAGGCGCGCTTAAGCGTGTCAGCTAATGCCTGGTAATCAGGCTTGCCTTCAACgg > 5:181683/1‑149 (MQ=255) tG‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAGGGGTCAATTACAAATCATCAAGGAAAGTTTTATCCAGTTGTTTGAAGGCGCGCTTAAGCGTGTCAGCTAATGCCTGGTAATCAGGCTTGCCTTCAACGGGTg < 5:55648/149‑1 (MQ=255) aaaaaaaaGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAGGGGTCAATTACAAATCATCAAGGAAAGTTTTATCCAGTTGTTTGAAGGCGCGCTTAAGCGTGTCAGCTAATGCCTGGTAATCAGGCTTGCCTTCAACGGGTGc > 2:393340/1‑148 (MQ=255) aaaaaaaGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAGGGGTCAATTACAAATCATCAAGGAAAGTTTTATCCAGTTGTTTGAAGGCGCGCTTAAGCGTGTCAGCTAATGCCTGGTAATCAGGCTTGCCTTCAACGGGTGcc > 6:153047/1‑148 (MQ=255) aaaaaaGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAGGGGTCAATTACAAATCATCAAGGAAAGTTTTATCCAGTTGTTTGAAGgcgc > 8:216762/1‑94 (MQ=255) aaaaaaGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAGGGGTCAATTACAAATCATCAAGGAAAGTTTTATCCAGTTGTTTGAAGgcgc < 7:216762/94‑1 (MQ=255) aaaaaaGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAGGGGTCAATTACAAATCATCAAGGAAAGTTTTATCCAGTTGTTTGAAGGCGCGCTTAAGCGTGTCAGCTAATGCCTGGTAATCAGGCTTGCCTTCAACGGGTGCCaa < 1:393340/149‑1 (MQ=255) taaaaGAAGGCATACTTAGCCTTCTTTTATATGCGTAATCAGGGGTCAATTACAAATCATCAAGGAAAGTTTTATCCAGTTGTTTGAAGGCGCGCTTAAGCGTGTCAGCTAATGCCTGGTAATCAGGCTTGCCTTCAACGGGTGCCaa > 8:42760/2‑148 (MQ=255) aaaaaGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAGGGGTCAATTACAAATCATCAAGGAAAGTTTTATCCAGTTGTTTGAAGGCGCGCTTAAGCGTGTCAGCTAATGCCTGGTAATCAGGCTTGc > 7:113214/1‑132 (MQ=255) aaaaaGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAGGGGTCAATTACAAATCATCAAGGAAAGTTTTATCCAGTTGTTTGAAGGCGCGCTTAAGCGTGTCAGCTAATGCCTGGTAATCAGGCTTGc < 8:113214/132‑1 (MQ=255) agaagGCTGAGTATGCCTTCTTTTATATGCGTAATCAGGGGTCAATTACAAATCATCAAGGAAAGTTTTATCCAGTTGTTTGAAGGCGCGCTTAAGCGTGTCAGCTAATGCCTGGTAATCAGGCTTGCCTTCAACGGGTGCCAACACCt < 2:37467/149‑1 (MQ=255) | TTGTTTGCAGGCGACGGTAACGTTCAGCATTTGCCGGATCGAGCATAGTCATCATCTTGTACTGATTAGACAAAATAAGACGTTGCGCGTTGGTCATTTCCATTGTTGACTCCTGTATCACTCTACTACGGTG‑AAAAAAAAGAAGGCTGAGTATGCCTTCTTTTATATGCGTAATCAGGGGTCAATTACAAATCATCAAGGAAAGTTTTATCCAGTTGTTTGAAGGCGCGCTTAAGCGTGTCAGCTAATGCCTGGTAATCAGGCTTGCCTTCAACGGGTGCCAACACCT > NC_000913/2412492‑2412780 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |