| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,666,510 | T→A | 5.1% | L359* (TTA→TAA) | csiE → | stationary phase inducible protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,666,510 | 0 | T | A | 5.1% | 293.0 / 3.7 | 91 | L359* (TTA→TAA) | csiE | stationary phase inducible protein |
| Reads supporting (aligned to +/- strand): ref base T (39/47); new base A (2/3); total (41/50) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TACGGCGTCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCATGAAAAACAGATTATTCTTCTTACCGGGAATGATAGCGAGCGAGAAGCGCAGATTGAGCAGCAGTTACGCGAACTAACGTTACTGCCGCTCAACATTAAGCATATGTCGGTAAAGGCATTTTTGCAGACAGGCGCTCCGCGTGGCGCGGCACTGATTATTGCGCCTTATACCATGCCATTACCGCTCTTTTCACCACCGCTGATCTATACG > NC_000913/2666362‑2666655 | tACGGCGTCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCATGAAAAACAGATTATTCTTCTTACCGGGAATGATAGCGAGCGAGAAGCGCAGATTGAGCAGCAGtt < 7:298498/149‑1 (MQ=255) tCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCATGAAAAACAGATTATTCTTCTTACCGGGAATGATAGCGAGCGAGAAGCGGAGATTGAGCAGCAGTTACGCGaa < 6:349970/149‑1 (MQ=255) tCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCATGAAAAACAGATTATTCTTCTTACCGGGAATGATAGCGAGCGAGAAGCGCAGATTGAGCAGCAGTTACGCGaa < 1:97718/149‑1 (MQ=255) tCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCATGAAAAACAGATTATTCTTCTTACCGGGAATGATAGCGAGCGAGAAGCGCAGATTGAGCAGCAGTTACGCGaa < 1:336374/149‑1 (MQ=255) acATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCATGAAAAACAGATTATTCTTCTTACCGGGAATGATAGCGAGCGAGAAGCGCAGATTGAGCAGCAGTTACGCGAAc > 2:399844/2‑149 (MQ=255) tCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCATGAAAAACAGATTATTCTTCTTACCGGGAATGATAGCGAGCGAGAAGCGCAGATTGAGCAGCAGTTACGCGAACTaa > 7:94957/1‑149 (MQ=255) tttCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCATGAAAAACAGATTATTCTTCTTACCGGGAATGATAGCGAGCGAGAAGCGCAGATTGAGCAGCAGTTACGCGAACTAACg > 7:270491/1‑149 (MQ=255) tttCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCATGAAAAACAGATTATTCTTCTTACCGGGAATGATAGCGAGAGAGAAGCGCAGATTGAGCAGCAGTAACGCGAACTAACg > 1:57910/1‑149 (MQ=255) tCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCATGAAAAACAGATTATTCTTCTTACCGGGAATGATAGCGAGCGAGAAGCGCAGATTGAGCAGCAGTTACGCGAACTAAc < 8:257034/146‑1 (MQ=255) tCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCATGAAAAACAGATTATTCTTCTTACCGGGAATGATAGCGAGCGAGAAGCGCAGATTGAGCAGCAGTTACGCGAACTAACGt < 7:328938/148‑1 (MQ=255) tgatgaGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCATGAAAAACAGATTATTCTTCTTACCGGGAATGATAGCGAGCGAGAAGCGCAGATTGAGCAGCAGTTACGCGAACTAACGTTAc > 3:183060/1‑149 (MQ=255) tgatgaGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCATGAAAAACAGATTATTCTTCTTACCGGGAATGATAGCGAGCGAGAAGCGCAGATTGAGCAGCAGTTACGCGAACTAACGTTAc > 2:161374/1‑149 (MQ=255) atgaGGAAAGTGGTCTGGTGGCGGTGATTTTCGGGGCCTGGCTAATGCAGGAAAACGATCTGCATGAAAAACAGATTATTCTTGTTACCGGGAATGATAGCGAGCGAGTAGCGCAGATTGAGCAGCAGTTACGCGAACTAACGTTACt < 8:290163/148‑1 (MQ=255) atgaGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCATGAAAAACAGATTATTCTTCTTACCGGGAATGATAGCGAGCGAGAAGCGCAGATTGAGCAGCAGTTACGCGAACTAACGTTACt < 1:115911/148‑1 (MQ=255) atgaGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCATGAAAAACAGATTATTCTTCTTACCGGGAATGATAGCGAGCGAGAAGCGCAGATTGAGCAGCAGTTACGCGAACTAACGTTACTg > 1:236823/1‑149 (MQ=255) aggcggAACGTGGTCTGGGGGCGGTGAGTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCATGAAAAACAGATTATTCTTCTTACCGGGAATGATAGCGAGCGAGAAGCGCAGATTGAGCAGCAGTTACGCGAACTAACGTTACt < 8:290167/144‑1 (MQ=255) gaGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCATGAAAAACAGATTATTCTTCTTACCGGGAATGATAGCGAGCGAGAAGCGCAGATTGAGCAGCACTTACGCGAACTAACGTTACTGcc > 3:112746/1‑149 (MQ=255) aGGAAAGGGGTCTGGGCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCATGAAAAACAGATTATTCTTCTTACCGGGAATGATAGCGAGCGAGAAGCGCAGATTGAGCAGCAGTTACGCGAACTAACGTTACTGcc < 8:306546/148‑1 (MQ=255) ggAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCATGAAAAACAGATTATTCTTCTTACCGGGAATGATAGCGAGCGAGAAGCGCAGATTGAGCAGCAGTTACGCGAACTAACGTTACTGCCGc < 5:224960/149‑1 (MQ=255) tctggtcGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCATGAAAAACAGATTATTCTTCTTACCGGGAATGATAGCGAGCGAGAAGCGCAGATTGAGCGGCAGTAACGTTAGTTCGCGTAACTGCTGCTCaatctgc < 1:76640/149‑6 (MQ=37) tctggtcGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCATGAAAAACAGATTATTCTTCTTACCGGGAATGATAGCGAGCGAGAAGCGCAGATTGAGCGGCAGTAACGTTAGTTCGCGTAACTGCTGCTCaatctgc < 7:189522/149‑6 (MQ=37) gtcGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCATGAAAAACAGATTATTCTTCTTACCGGGAATGATAGCGAGCGAGAAGCGCAGATTGAGCAGCAGTTACGCGAACTAACGTTACTGCCGCTCAACATTAAGc < 4:183060/148‑1 (MQ=255) gtcGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCATGAAAAACAGATTATTCTTCTTACCGGGAATGATAGCGAGCGAGAAGCGCAGATTGAGCAGCAGTTACGCGAACTAACGTTACTGCCGCTCAACATTAAGc < 1:95326/148‑1 (MQ=255) gcgGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCATGAAAAACAGATTATTCTTCTTACCGGGAATGATAGCGAGCGAGAAGCGCAGATTGAGCAGCAGTTACGCGAACTAACGTTACTGCCGCTCAACATTAAGCatat < 6:316724/149‑1 (MQ=255) cgGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCATGAAAAACAGATTATTCTTCTTACCGGGAATGATAGCGAGCGAGAAGCGCAGATTGAGCAGCAGTTACGCGAACTAACGTTACTGCCGCTCAACATTAAGCATATg > 3:369066/1‑149 (MQ=255) ggTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCATGAAAAACAGATTATTCTTCTTACCGGGAATGATAGCGAGCGAGAAGCGCAGATTGAGCAGCAGTTACGCGAACTAACGTTACTGCCGCTCAACATTAAGCATATGt > 3:28829/1‑149 (MQ=255) ggTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCATGAAAAACAGATTATTCTTCTTACCGGGAATGATAGCGAGCGAGAAGCGCAGATTGAGCAGCAGTTACGCGAACTAACGTTACTGCCGCTCAACATTAAGCATATGt > 8:115296/1‑149 (MQ=255) gTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCATGAAAAACAGATTATTCTTCTTACCGGGAATGATAGCGAGCGAGAAGCGCAGATTGAGCAGCAGTTACGCGAACTAACGTTACTGCCGCTCAACATTAAGCATATGTc > 6:270290/1‑149 (MQ=255) cGGTGCCTGGCTAATGCAGGAAAACGATCTGCATGAAAAACAGATTATTCTTCTTACCGGGAATGATAGCGAGCGAGAAGCGCAGATTGAGCAGCAGTTACGCGAACTAACGTTACTGCCGCTCAACATTAAGCATATGTCGGTAAAgg > 8:278398/1‑149 (MQ=255) cGGTGAATGGCTAATTCAGGAAAACGATCTGCATTAAAAACAGATTATTCTTGTTACCGGGAATGATTGCGAGCTAGTAGATCAGATTGAGCAGCAGTTTCGCGAACTAACGTTACTGCCGCTTAACATTAATCATATGTGGTTAAAg < 2:57910/148‑1 (MQ=255) ccTGGCTAATGCAGGAAAACGATCTGCATGAAAAACAGATTATTCTTCTTACCGGGAATGATAGCGAGCGAGAAGCGCAGATTGAGCAGCAGTTACGCGAACTAACGTTACTGCCGCTCAACATTAAGCATATGTCGGTAAAGGCAttt > 5:183507/1‑149 (MQ=255) cTGGCTAATGCAGGAAAACGATCTGCATGAAAAACAGATTATTCTTCTTACCGGGAATGATAGCGAGCGAGAAGCGCAGATTGAGCGGCAGTAACGTTAGTTCGCGTAACTGCTGCTCaat < 3:122571/121‑2 (MQ=25) cTGGCTAATGCAGGAAAACGATCTGCATGAAAAACAGATTATTCTTCTTACCGGGAATGATAGCGAGCGAGAAGCGCAGATTGAGCGGCAGTAACGTTAGTTCGCGTAACTGCTGCTCaat > 4:122571/1‑120 (MQ=25) cTGGCTAATGCAGGAAAACGATCTGCATGAAAAACAGATTATTCTTCTTACCGGGAATGATAGCGAGCGAGAAGCGCAGATTGAGCAGCAGTTACGCGAACTAACGTTACTGCAGCTCAACATTAAGCATATGTCGGTAAAGGCAtttt > 4:135644/1‑149 (MQ=255) ggCTAATGCAGGAAAACGATCTGCATGAAAAACAGATTATTCTTCTTACCGGGAATGATAGCGAGCGAGAAGCGCAGATTGAGCAGCAGTTACGCGAACTAACGTTACTGCCGCTCAACATTAAGCATATGTCGGTAAAGGCATTTTTg < 3:301719/149‑1 (MQ=255) gCTAATGCAGGAAAACGATCTGCATGAAAAATAGATTATTCTTCTTACCGGGAATGATAGCGAGCGAGAAGCGCAGATTGAGCAGCAGTTACGCGAACTAACGTTACTGCCGCTCAACATTAAGCATATGTCGGTAAAGGCAttttt < 7:279423/147‑1 (MQ=255) cTAATGCAGGAAAACGATCTGCATGAAAAACAGATTATTCTTCTTACCGGGAATGATAGCGAGCGAGAAGCGCAGATTGAGCAGCAGTTACGCGAACTAACGTTACTGCCGCTCAACATTAAGCATATGTCGGTAAAGGCATTTTTGCa < 7:278398/149‑1 (MQ=255) cTAATGCAGGAAAACGATCTGCATGAAAAACAGATTATTCTTCTTACCGGGAATGATAGCGAGCGAGAAGCGCAGATTGAGCAGCAGTTACGCGAACTAACGTTACTGCCGCTCAACATTAAGCATATGTCGGTAAAGGCATTTTTGCa < 8:94957/149‑1 (MQ=255) cAGGAAAACGATCTGCATGAAAAACAGATTATTCTTCTTACCGGGAATGATAGCGAGCGAGAAGCGCAGATTGAGCAGCAGTTACGCGAACTAACGTTACTGCCGCTCAACATTAAGCATATGTCGGTAAAGGCATTTTTGCAGACAgg > 3:310683/1‑149 (MQ=255) cAGGAAAACGATCTGCATGAAAAACAGATTATTCTTCTTACCGGGAATGATAGCGAGCGAGAAGCGCAGATTGAGCAGCAGTTACGCGAACTAACGTTACTGCCGCTCAACATTAAGCATATGTCGGTAAAGGCATTTTTGCAGACAgg > 4:235921/1‑149 (MQ=255) cAGGAAAACGATCTGCATGAAAAACAGATTATTCTTCTTACCGGGAATGATAGCGAGCGAGAAGCGCAGATTGAGCAGCAGTTACGCGAACTAACGTTACTGCCGCTCAACATTAAGCATATGTCGGTAAAGGCATTTTTGCAGACAg < 8:377971/148‑1 (MQ=255) ggAAAACGATCTGCATGAAAAACAGATTATTCTTCTTACCGGGAATGATAGCGAGCGAGAAGCGCAGATTGAGCAGCAGTTACGCGAACTAACGTTACTGCCGCTCAACATTAAGCATATGTCGGTAAAGGCATTTTTGCAGACAGgcg > 7:48885/1‑149 (MQ=255) cGATCTGCATGAAAAACAGATTATTCTTCTTACCGGGAATGATAGCGAGCGAGAAGCGCAGATTGAGCAGCAGTTACGCGAACTAACGTTACTGCCGCTCAACATTAAGCATATGTCGGTAAAGGCATTTTTGCAGACAGGCGCTCcgc < 1:238030/149‑1 (MQ=255) gATCTGCATGAAAAACAGATTATTCTTCTTACCGGGAATGATAGCGAGCGAGAAGCGCAGATTGAGCAGCAGTTACGCGAACTAACGTTACTGCCGCTCAACATTAAGCATATGTCGGTAAAGGCATTTTTGCAGACAGGCGCTCcgcg > 1:344970/1‑149 (MQ=255) cATGAAAAACAGATTATTCTTCTTACCGGGAATGATAGCGAGCGAGAAGCGCAGATTGAGCAGCAGTTACGCGAACTAACGTTACTGCCGCTCAACATTAAGCATATGTCGGTAAAGGCAt > 6:281296/1‑121 (MQ=255) cATGAAAAACAGATTATTCTTCTTACCGGGAATGATAGCGAGCGAGAAGCGCAGATTGAGCAGCAGTTACGCGAACTAACGTTACTGCCGCTCAACATTAAGCATATGTCGGTAAAGGCAt < 5:281296/121‑1 (MQ=255) cATGAAAAACAGATTATTCTTCTTACCGGGAATGATAGCGAGCGAGAAGCGCAGATTGAGCAGCAGTTACGCGAACTAACGTTACTGCCGCTCAACATTAAGCATATGTCGGTAAAGGCATTTTTGCAGACAGGCGCTCCGCGTGgcgc > 8:324984/1‑149 (MQ=255) aTGAAAAACAGATTATTCTTCTTACCGGGAATGATAGCGAGCGAGCAGCGCAGATTGAGCAGCAGTTACGCGAACTAACGTTACTGCCGCTCAACATTAAGCATATGTCGGTAAAGGCATTTTTGCAGACAGGCGCTCCGCGTGGcgcg < 6:247175/149‑1 (MQ=255) aTGAAAAACAGATTATTCTTCTTACCGGGAATGATAGCGAGCGAGAAGCGCAGATTGAGCAGCAGTTACGCGAACTAACGTTACTGCCGCTCAACATTAAGCATATGTCGGTAAAGGCATTTTTGCAGACAg < 2:235938/132‑1 (MQ=255) aTGAAAAACAGATTATTCTTCTTACCGGGAATGATAGCGAGCGAGAAGCGCAGATTGAGCAGCAGTTACGCGAACTAACGTTACTGCCGCTCAACATTAAGCATATGTCGGTAAAGGCATTTTTGCAGACAg > 1:235938/1‑132 (MQ=255) gAAAAACAGATTATTCTTCTTACCGGGAATGATAGCGAGCGAGAAGCGCAGATTGAGCAGCAGTTACGCGAACTAACGTTACTGCCGCTCAACATTAAGCATATGTCGGTAAAGGCATTTTTGCAGACAGGCGCTCCGCGTGGCGCgg > 1:40724/1‑148 (MQ=255) gAAAAACAGATTATTCTTCTTACCGGGAATGATAGCGAGCGAGAAGCGCAGATTGAGCAGCAGTTACGCGAACTAACGTTACTGCCGCTCAACATTAAGCATATGTCGGTAAAGGCATTTTTGCAGACAGGCGCTCCGCGTGGCGCgg > 4:167237/1‑148 (MQ=255) aaaaaCAGATTATTCTTCTTACCGGGAATGATAGCGAGCGAGAAGCGCAGATTGAGCAGCAGTTACGCGAACTAACGTTACTGCCGCTCAACATTAAGCATATGTCGGTAAAGGCATTTTTGCAGACAGGCGCTCCGCGTGGCGCGGCa > 4:280207/1‑149 (MQ=255) aacaCAGCTTCTTCTGCTTCCCGGGAATGCTCGCGAGCGAGACGCGCAGATTGATCAGCCTTTACGCGAACTAACGGTACTGCCGCTCAACATTACGCATATGTCGGTAAAGGAATTTTTGCAGACAGGCGCTCCGCGTGGCGCGGCAc < 8:358650/146‑1 (MQ=255) aaCAGATTATTCTTCTTACCGGGAATGATAGCGAGCGAGAAGCGCAGATTGAGCAGCAGTTACGCGAACTAACGTTACTGCCGCTCAACATTAAGCATATGTCGGTAAAGGCATTTTTGCAGa < 6:394066/123‑1 (MQ=255) attattCTTCTTACCGGGAATGATAGCGAGCGAGAAGCGCAGATTGAGCAGCAGTTACGCGAACTAACGTTACTGCCGCTCAACATTAAGCATATGTCGGTAAAGGCATTTTTGCAGACAGGCGCTCCGCGTGGCGCGGCACTGattat > 7:5632/1‑149 (MQ=255) attattCTTCTTACCGGGAATGAGAGCGAGCGAGAAGCGCAGATTGAGCAGCAGTTACGCGAACTAACGTTACTGCCGCTCAACATTAATCATATGTCGGTAAAGGCATTTTTGCAGACAGGCGCTCCGCGTGGCGCGGCACTGattat < 4:106103/149‑1 (MQ=255) attCTTCTTACCGGGAATGATAGCGAGCGAGAAGCGCAGATTGAGCAGCAGTTACGCGAACTAACGTTACTGCCGCTCAACATTAAGCATATGTCGGTAAAGGCATTTTTGCAGACAGGCGCTCCGCGTGGCGCGGCACTGATTATTgc > 6:15075/1‑149 (MQ=255) ttcttcTTACCGGGAATGATAGCGAGCGAGAAGCGCAGATTGAGCAGCAGTTACGCGAACTAACGTTACTGCCGCTCAACATTAAGCATATGTCGGTAAAGGCATTTTTGCAGACAGGCGCTCCGCGTGGCGCGGCACTGATTATTgcg > 5:131366/1‑149 (MQ=255) ttcttcTTACCGGGAATGATAGCGAGCGAGAAGCGCAGATTGAGCAGCAGTTACGCGAACTAACGTTACTGCCGCTCAACATTAAGCATATGTCGGTAAAGGCATTTTTGCAGACAGGCGCTCCGCGTGGCGCGGCACTGATTATTgc < 4:369066/148‑1 (MQ=255) ttcttcTTACCGGGAATGATAGCGAGCGAGAAGCGCAGATTGAGCAGCAGTTACGCGAACTAACGTTACTGCCGCTCAACATTAAGCATATGTCGGTAAAGGCATTTTTGCAGACAGGCGCTCCGCGTGGCGCGGCACTGATTATTgc < 6:183507/148‑1 (MQ=255) cttcttACCGGGAATGATAGCGAGCGAGAAGCGCAGATTGAGCAGCAGTTACGCGAACTAACGTTACTGCCGCTCAACATTAAGCATATGTCGGTAAAGGCATTTTTGCAGACAGGCGCTCCGCGTGGCGCGGCACTGATTATTgcgc < 4:28829/148‑1 (MQ=255) ttcttACCGGGAATGATAGCGAGCGAGAAGCGCAGATTGAGCAGCAGTTACGCGAACTAACGTTACTGCCGCTCAACATTAAGCATATGTCGGTAAAGGCATTTTTGCAGACAGGCGCTCCGCGTGGCGCGGCACTGATTATTGCGCCt > 4:115664/1‑149 (MQ=255) cttACCGGGAATGATAGCGAGCGAGAAGCGCAGATTGAGCAGCAGTTACGCGAACTAACGTTACTGCCGCTCAACATTAAGCATATGTCGGTAAAGGCATTTTTGCAGACAGGCGCTCCGCGTGGCGCGGCACTGATTATTGCGcc < 4:310683/146‑1 (MQ=255) cttACCGGGAATGATAGCGAGCGAGAAGCGCAGATTGAGCAGCAGTTACGCGAACTAACGTTACTGCCGCTCAACATTAAGCATATGTCGGTAAAGGCATTTTTGCAGACAGGCGCTCCGCGTGGCGCGGCACTGATTATTGCGCCtt < 8:270491/148‑1 (MQ=255) cttACCGGGAATGATAGCGAGCGAGAAGCGCAGATTGAGCAGCAGTTACGCGAACTAACGTTACTGCCGCTCAACATTAAGCATATGTCGGTAAAGGCATTTTTGCAGACAGGCGCTCCGCGTGGCGCGGCACTGATTATTGCGCCtt < 8:48885/148‑1 (MQ=255) aCCGGGAATGATAGCGAGCGAGAAGCGCAGATTGAGCAGCAGTTACGCGAACTAACGTTACTGCCGCTCAACATTAAGCATATGTCGGTAAAGGCATTTTTGCAGACAGGCGCTCCGCGTGGCGCGGCACTGATTATTGCGCCTta < 2:236823/146‑1 (MQ=255) ccGGGAATGATAGCGAGCGAGAAGCGCAGATTGAGCAGCAGTTACGCGAACTAACGTTACTGCCGCTCAACATTAAGCATATGTCGGTAAAGGCATTTTTGCAGACAGGCGCTCCGCGTGGCGCGGCACTGATTATTGCGCCTTATAcc < 5:270290/149‑1 (MQ=255) cGGGAATGATAGCGAGCGAGAAGCGCAGATTGAGCAGCAGTTACGCGAACTAACGTTACTGCCGCTCAACATTAAGCATATGTCGGTAAAGGCATTTTTGCAGACAGGCGCTCCGCGTGGCGCGGCACTGATTATTGCGCCTTATACCa > 8:32285/1‑149 (MQ=255) gggAATGATAGCGAGCGAGAAGCGCAGATTGAGCAGCAGTTACGCGAACTAACGTTACTGCCGCTCAACATTAAGCATATGTCGGTAAAGGCATTTTTGCAGACAGGCGCTCCGCGTGGCGCGGCACTGATTATTGCGCCTTATACCAt < 2:344970/149‑1 (MQ=255) gggAATGATAGCGAGCGAGAAGCGCAGATTGAGCAGCAGTTACGCGAACTAACGTTACTGCCGCTCAACATTAAGCATATGTCGGTAAAGGCATTTTTGCAGACAGGCGCTCCGCGTGGCGCGGCACTGATTATTGCGCCTTATACCAt > 4:31193/1‑149 (MQ=255) ggAATGATAGCGAGCGAGAAGCGCAGATTGAGCACCAGTTACGCGAACTAACGTTACTGCCGCTCAACATTAAGCATATGTCGGTAAAGGCATTTTTGCAGACAGGCGCTCCGCGTGGCGCGGCACTGATTATTGCGCCTTATACCATg > 4:274436/1‑149 (MQ=255) aTAGCGAGCGAGAAGCGCAGATTGAGCAGCAGTTACGCGAACTAACGTTACTGCCGCTCAACATTAAGCATATGTCGGTAAAGGCATTTTTGCAGACAGGCGCTCCGCGTGGCGCGGCACTGATTATTGCGCCTTATACCATGCCATTa < 7:324984/149‑1 (MQ=255) tAGCGAGCGAGAAGCGCAGATTGAGCAGCAGTTACGCGAACTAACGTTACTGCCGCTCAACATTAAGCATATGTCGGTAAAGGAATTTTTGCAGACAGGCGCTCCGCGTGGCGCGGCACTGATTATTGCGCCTTATACCATGCCATTAc > 5:149026/1‑149 (MQ=255) gcgagcgaGAAGCGCAGATTGAGCAGCAGTTACGCGAACTAACGTTACTGCCGCTCAACATTAAGCATATGTCGGTAAAGGCATTTTTGCAGACAGGCGCTCCGCGTGGCGCGGCACTGATTATTGCGCCTTATACCATGCCATTACCg < 2:40724/149‑1 (MQ=255) agcgagAAGCGCAGATTGAGCAGCAGTTACGCGAACTAACGTTACTGCCGCTCAACATTAAGCATATGTCGGTAAAGGCATTTTTGCAGACAGGCGCTCCGCGTGGCGCGGc < 7:243374/112‑1 (MQ=255) agcgagAAGCGCAGATTGAGCAGCAGTTACGCGAACTAACGTTACTGCCGCTCAACATTAAGCATATGTCGGTAAAGGCATTTTTGCAGACAGGCGCTCCGCGTGGCGCGGc > 8:243374/1‑112 (MQ=255) cgagAAGCGCAGATTGAGCAGCAGTTACGCGAACTAACGTTACTGCCGCTCAACATTAAGCATATGTCGGTAAAGGCATTTTTGCAGACAGGCGCTCCGCGTGGCGCGGCACTGATTATTGCGCCTTATACCATGCCATTACCGCTCtt < 3:31193/149‑1 (MQ=255) gagaAGCGCAGATTGAGCAGCAGTTACGCGAACTAACGTTACTGCCGCTCAACATTAAGCATATGTTGGt > 2:196066/1‑70 (MQ=255) gagaAGCGCAGATTGAGCAGCAGTTACGCGAACTAACGTTACTGCCGCTCAACATTAAGCATATGTTGGt < 1:196066/70‑1 (MQ=255) gagaAGCGCAGATTGAGCAGCAGTTACGCGAACTAACGTTACTGCCGCTCAACATTAAGCATATGTCGGTAAAGGCATTTTTGCAGACAGGCGCTCCGCGTGGCGCGGCACTGATTATTGCGCCTTATACCATGCCATTACCGCTCttt > 4:131274/1‑149 (MQ=255) aGCGCAGATTGAGCAGCAGTTACGCGAACTAACGTTACTGCCGCTCAACATTAAGCATATGTCGGTAAAGGCATTTTTGCAGACAGGCGCTCCGCGTGGCGCGGCACTGATTATTGCGCCTTATACCATGCCATTACCGCTCTTTTcac < 3:280207/149‑1 (MQ=255) aGCGCAGATTGAGCAGCAGTTACGCGAACTAACGTTACTGCCGCTCAACATTAAGCATATGTCGGTAAAGGCATTTTTGCAGACAGGCGCTCCGCGTGGCGCGGCACTGATTATTGCGCCTTATACCATGCCATTACCGCTCTTTTcac < 1:399844/149‑1 (MQ=255) gcAGATTGAGGAGCAGTTACGAGAACTTACGTTACTGCATCTCAACATTAAGCATATGTCGGTAAAGGCATTTTTGCAGACAGGCGCGCCGAGTGGCGCGGCACTGATTATTTCGCCTTATACCATGGCATTACAGCTCTTTTcacca < 6:149026/148‑1 (MQ=255) cAGATTGAGCAGCAGTTACGCGAACTAACGTTACTGCCGCTCAACATTAAGCATATGTCGGTAAAGGCATTTTTGCAGACAGGCGCTCCGCGTGGCGCGGCACTGATTATTGCGCCTTATACCATGCCATTACCGCTCTTTTCaccacc < 3:115664/149‑1 (MQ=255) aTTGAGCAGCAGTTACGCGAACTAACGTTACTGCCGCTCAACATTAAGCATATGTCGGTAAAGGCATTTTTGCAGACAGGCGCTCCGCGTGGCGCGGCACTGa > 3:129360/1‑103 (MQ=255) aTTGAGCAGCAGTTACGCGAACTAACGTTACTGCCGCTCAACATTAAGCATATGTCGGTAAAGGCATTTTTGCAGACAGGCGCTCCGCGTGGCGCGGCACTGa < 4:129360/103‑1 (MQ=255) agcagcAGTTACGCGAACTAACGTTACTGCCGCTCAACATTAAGCATATGTCGGTAAAGGCATTTTTGCAGACAGGCGCTCCGCGTGGCGCGGCACTGATTATTGCGCCTTATACCATGCCATTACCGCTCTTTTCACCACCGCTGAt < 3:135644/148‑1 (MQ=255) gcagcaGTTACGCGAACTAACGTTACTGCCGCTCAACATTAAGCATATGTCGGTAAAGGCATTTTTGCAGACAGGCGCTCCGCGTGGCGCGGCACTGATTATTGCGCCTTATACCATGCCATTACCGCTCTTTTCACCACCGCTGATc > 6:311969/1‑148 (MQ=255) agTTACGCGAACTAACGTTACTGCCGCTCAACATTAAGCATATGTCGGTAAAGGCATTTTTGCAGACAGGCGCTCCGCGTGGCGCGGCACTGATTATTGCGCCTTATACCATGCCATTACCGCTCTTTTc > 2:309523/1‑130 (MQ=255) agTTACGCGAACTAACGTTACTGCCGCTCAACATTAAGCATATGTCGGTAAAGGCATTTTTGCAGACAGGCGCTCCGCGTGGCGCGGCACTGATTATTGCGCCTTATACCATGCCATTACCGCTCTTTTc < 1:309523/130‑1 (MQ=255) gTTACGCGAACTAACGTTACTGCCGCTCAACATTAAGCATATGTCGGTAAAGGCATTTTTGCAGACAGGCGCTCCGCGTGGCGCGGCACTGATTATTGCGCCTTATACCATGCCATTACCGCTCTTTTCACCACCGCTGATCTATACg > 8:252314/1‑148 (MQ=255) | TACGGCGTCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCATGAAAAACAGATTATTCTTCTTACCGGGAATGATAGCGAGCGAGAAGCGCAGATTGAGCAGCAGTTACGCGAACTAACGTTACTGCCGCTCAACATTAAGCATATGTCGGTAAAGGCATTTTTGCAGACAGGCGCTCCGCGTGGCGCGGCACTGATTATTGCGCCTTATACCATGCCATTACCGCTCTTTTCACCACCGCTGATCTATACG > NC_000913/2666362‑2666655 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |