| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,771,583 | C→T | 5.4% | L146L (CTG→TTG) | yfjT → | CP4‑57 prophage; putative periplasmic protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,771,583 | 0 | C | T | 5.4% | 239.2 / 2.6 | 74 | L146L (CTG→TTG) | yfjT | CP4‑57 prophage; putative periplasmic protein |
| Reads supporting (aligned to +/- strand): ref base C (35/35); new base T (2/2); total (37/37) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.81e-01 | |||||||||||
CATTCCCTCAACCCTTGGCTGGCGTAACGGAGATAATGCCTGGTTCAGCTTCATCATGGATATCCGTAAGGCCCGGCAGTTCGACGTCTACGTCAATGACCAGAAAGTTGGATCGTTTAACCCTGATGTTCGGAATGCACAAAAGGTCCTGCCAACATTAGCGGACTGCACTAACGACTGACGGCTGCGCCTTCCCTACCATAACAACCCTGATTGCCTCCGGCGGTCGGGGGTTTCTTTTTTCTCCTTAATCTCCAGAGGTAGGCCACGTACTTTCGAACGATGAGCGCAGTGG > NC_000913/2771435‑2771729 | cATTCCCTCAACCCTTGGCTGGCGTAACGGAGATAATGCCTGGTTCAGCTTCATCATGGATATCCGTAAGGCCCGGCAGTTCGACGTCTACGTCAATGACCAGAAAGTTGGATCGTTTAACCCTGATGTTCGGAATGCACAAAAGGTcc > 3:195434/1‑149 (MQ=255)cATTCCCTCAACCCTTGGCTGGCGTAACGGAGATAATGCCTGGTTCAGCTTCATCATGGATATCCGTAAGGCCCGGCAGTTCGACGTCTACGTCAATGACCAGAAAGTTGGATCGTTTAACCCTGATGTTCGGAATGCACAAAAGGTcc > 2:377552/1‑149 (MQ=255) cccTCAACCCTTGGCTGGCGTAACGGAGATAATGCCTGGTTCAGCTTCATCATGGATATCCGTAAGGCCCGGCAGTTCGACGTCTACGTCAATGACCAGAAAGTTGGATCGTTTAACCCTGATGTTCGGAATGCACAAAAGGTCCTGc < 8:83139/148‑1 (MQ=255) cTCAACCCTTGGCTGGCGTAACGGAGATAATGCCTGGTTCAGCTTCATCATGGATATCCGTAAGGCCCGGCAGTTCGACGTCTACGTCAATGACCAGAAAGTTGGATCGTTTAACCCTGATGTTCGGAATGCACAAAAGGTCCTGCCaa > 1:53243/1‑149 (MQ=255) aaCCCTTGGCTGGCGTAACGGAGATAATGCCTGGTTCAGCTTCATCATGGATATCCGTAAGGCCCGGCAGTTCGACGTCTACGTCAATGACCAGAAAGTTGGATCGTTTAACCCTGATGTTCGGAATGCACAAAAGGTCCTGCCAACAt < 4:100047/149‑1 (MQ=255) aaCCCTTGGCTGGCGTAACGGAGATAATGCCTGGTTCAGCTTCATCATGGATATCCGTAAGGCCCGGCAGTTCGACGTCTACGTCAATGAACAGAAAGTTGGATCGTTTAACCCTGATGTTCGGAATGCACAATAGGTCCTGCCAACAt < 2:269805/149‑1 (MQ=255) cccTTGGCTGGCGTAACGGAGATAATGCCTGGTTCAGCTTCATCATGGATATCCGTAAGGCCCGGCAGTTCGACGTCTACGTCAATGACCAGAAAGTTGGATCGTTTAACCCTGATGTTCGGAATGCACAAAAGGTCCTGCTAACATTa < 2:22623/149‑1 (MQ=255) cccTTGGCTGGCGTAACGGAGATAATGCCTGGTTCAGCTTCATCATGGATATCCGTAAGGCCCGGCAGTTCGACGTCTACGTCAATGACCAGAAAGTTGGATCGTTTAACCCTGATGTTCGGAATGCACAAAAGGTCCTGCCAACATTa < 4:195434/149‑1 (MQ=255) ccTTGGCTGGCGTAACGGAGATAATGCCTGGTTCAGCTTCATCATGGATATCCGTAAGGCCCGGCAGTTCGACGTCTACGTCAATGACCAGAAAGTTGGATCGTTTAACCCTGATGTTCGGAATGCACAAAAGGTCCTGCCAACATTAg > 8:294474/1‑149 (MQ=255) gcGTAACGGAGATAATGCCTGGTTCAGCTTCATCATGGATATCCGTAAGGCCCGGCAGTTCGACGTCTACGTCAATGACCAGAAAGTTGGATCGTTTAACCCTGATGTTCGGAATGCACAAAAGGTCCTGCCAACATTAGCGGACTg < 7:294474/147‑1 (MQ=255) aCGGAGATAATGCCTGGTTCAGCTTCATCATGGATATCCGTAAGGCCCGGCAGTTCGACGTCTACGTCAATGACCAGAAAGTTGGATCGTTTAACCCTGATGTTCGGAATGCACAAAAGGTCCTGCCAACATTAGCGGACTGCACTAAc < 1:135348/149‑1 (MQ=255) aCGGAGATAATGCCTGGTTCAGCTTCATCATGGATATCCGTAAGGCCCGGCAGTTCGACGTCTACGTCAATGACCAGAAAGTTGGATCGTTTAACCCTGATGTTCGGAATGCACAAAAGGTCCTGCCAACATTAGCGGACTGCACTAAc < 8:184496/149‑1 (MQ=255) ggAGATAATGCCTGGTTCAGCTTCATCATGGATATCCGTAAGGCCCGGCAGTTCGACGTCTACGTCAATGACCAGAAAGTTGGATCGTTTAACCCTGATGTTCGGAATGCACAAAAGGTCCTGCCAACATTAGCGGACTGCACTAACGa > 1:170559/1‑149 (MQ=255) ggAGATAATGCCTGGTTCAGCTTCATCATGGATATCCGTAAGGCCCGGCAGTTCGACGTCTACGTCAATGACCAGAAAGTTGGATCGTTTAACCCTGATGTTCGGAATGCACAAAAGGTCCTGCCAACATTAGCGGACTGCACTAACGa > 4:149913/1‑149 (MQ=255) ggAGATAATGCCTGGTTCAGCTTCATCATGGATATCCGTAAGGCCCGGCAGTTCGACGTCTACGTCAATGACCAGAAAGTTGGATCGTTTAACCCTGATGTTCGGAATGCACAAAAGGTCCTGCCAACATTAGCGGACTGCACTAACGa < 3:149913/149‑1 (MQ=255) aaTGCCTGGTTCAGCTTCATCATGGATATCCGTAAGGCCCGGCAGTTCGACGTCTACGTCAATGACCAGAAAGTTGGATCGTTTAACCCTGATGTTCGGAATGCACAAAAGGTCCTGCCAACATTAGCGGACTGCACTAACGACTGACg > 6:4689/1‑149 (MQ=255) tGCCTGGTTCAGCTTCATCATGGATATCCGTAAGGCCCGGCAGTTCGACGTCTACGTCAATGACCAGAAAGTTGGATCGTTTAACCCTGATGTTCGGAATGCACAAAAGGTCTTGCCAACATTAGCGGACTGCACTAACGACTGACGGc > 5:64899/1‑149 (MQ=255) cTGGTTCAGCTTCATCATGGATATCCGTAAGGCCCGGCAGTTCGACGTCTACGTCAATGACCAGAAAGTTGGATCGTTTAACCCTGATGTTCGGAATGCACAAAAGTTCCTGCCAACATTAGCGGACTGCAATAACGACTGACGGCTgc > 4:291144/1‑149 (MQ=255) cTGGTTCAGCTGCATCATGCATATCCGTAAGGCCCGGCAGTTCGCCCTCTACGTCAATGACCAGAAAGTTGGATCGTTTAACCCTGATGTTCGGACTGCACAACAGGGCCTGCCAACATTAGCGGACTGCACTAACGACTGACGGCTgc < 8:356454/149‑1 (MQ=255) gTTCAGCTTCATCATGGATATCCGTAAGGCCCGGCAGTTCGACGTCTACGTCAATGACCAGAAAGTTGGATCGTTTAACCCTGATGTTCGGAATGCACAAAAGGTCCTGCCAACATTAGCGGACTGCACTAACGACTGACGGCTgcgc < 7:313517/148‑1 (MQ=255) gCTTCATCATGGATATCCGTAAGGCCCGGCAGTTCGACGTCTACGTCAATGACCAGAAAGTTGGATCGTTTAACCCTGATGTTCGGAATGCACAAAAGGTCCTGCCAACATTAGCGGACTGCACTAACGACTGACGGCt > 8:392522/1‑139 (MQ=255) gCTTCATCATGGATATCCGTAAGGCCCGGCAGTTCGACGTCTACGTCAATGACCAGAAAGTTGGATCGTTTAACCCTGATGTTCGGAATGCACAAAAGGTCCTGCCAACATTAGCGGACTGCACTAACGACTGACGGCt < 7:392522/139‑1 (MQ=255) gCTTCATCATGGATATCCGTAAGGCCCGGCAGTTCGACGTCTACGTCAATGACCAGAAAGTTGGATCGTTTAACCCTGATGTTCGGAATGCACAAAAGGTCCTGCCAACATTAGCGGACTGCACTAACGACTGACGGCTGCGCCTTccc < 6:6086/149‑1 (MQ=255) catcatGGATATCCGTAAGGCCCGGCAGTTCGACGTCTACGTCAATGACCAGAAAGTTGGATCGTTTAACCCTGATGTTCGGAATGCACAAAAGGTCTTGCCAACATTAGCGGACTGCACTAACGACTGACGGCTGCGCCTTCCCTa < 6:64899/147‑1 (MQ=255) catGGATATCCGTAAGGCCCGGCAGTTCGACGTCTACGTCAATGACCAGAAAGTTGGATCGTTTAACCCTGATGTTCGGAATGCACAAAAGGTCCTGCCAAc > 7:374730/1‑102 (MQ=255) catGGATATCCGTAAGGCCCGGCAGTTCGACGTCTACGTCAATGACCAGAAAGTTGGATCGTTTAACCCTGATGTTCGGAATGCACAAAAGGTCCTGCCAAc < 8:374730/102‑1 (MQ=255) tGGATATCCGTAAGGCCCGGCAGTTCGACGTCTACGTCAATGACCAGAAAGTTGGATCGTTTAACCCTGATGTTCGGAATGCACAAAAGGTCCTGCCAACATTAGCGGACTGCACTAACGACTGACGGCTGCGCCTTCCCTACCATaa > 2:276543/1‑148 (MQ=255) tGGATATCCGTAAGGCCCGGCAGTTCGACGTCTACGTCAATGACCAGAAAGTTGGATCCTTTAACCCTGATGTTCGGAATGCACAAAAGGTCCTGCCAACATTAGCGGACTGCACTAACGACTGACGGCTGCGCCTTCCCTACCATaa > 7:11504/1‑148 (MQ=255) atCCGTAAGGCCCGGCAGTTCGACGTCTACGTCAATGACCAGAAAGTTGGATCGTTTAACCCTGATGTTCGGAATGCACAAAAGGTCCTGCCaa > 3:304626/1‑94 (MQ=255) atCCGTAAGGCCCGGCAGTTCGACGTCTACGTCAATGACCAGAAAGTTGGATCGTTTAACCCTGATGTTCGGAATGCACAAAAGGTCCTGCCaa < 4:304626/94‑1 (MQ=255) tCCGTAAGGCCCGGCAGTTCGACGTCTACGTCAATGACCAGAAAGTTGGATCGTTTAACCCTGATGTTCGGAATGCACAAAAGGTCCTGCCAACATTAGCGGACTGCACTAACGACTGACGGCTGCGCCTTCCCTACCATAACAACCCt < 5:4689/149‑1 (MQ=255) ccGTAAGGCCCGGCAGTTCGACGTCTACGTCAATGACCAGAAAGTTGGATCGTTTAACCCTGATGTTCGGAATGCACAAAAGGTCCTGCCAACATTAGCGGACTGCACTAACGACTGACGGCTGCGCCTTc > 1:338137/1‑131 (MQ=255) ccGTAAGGCCCGGCAGTTCGACGTCTACGTCAATGACCAGAAAGTTGGATCGTTTAACCCTGATGTTCGGAATGCACAAAAGGTCCTGCCAACATTAGCGGACTGCACTAACGACTGACGGCTGCGCCTTc < 2:338137/131‑1 (MQ=255) gTAAGGCCCGGCAGTTCGACGTCTACGTCAATGACCAGAAAGTTGGATCGTTTAACCCTGATGTTCGGAATGCAC‑AAAGGTCCTGCCAACATTAGCGGACTGCACTAACGACTGACGGCTGCGCCTTCCCTACCATAACAACCCTGAtt < 7:180620/149‑1 (MQ=255) tAAGGCCCGGCAGTTCGACGTCTACGTCAATGACCAGAAAGTTGGATCGTTTAACCCTGATGTTCGGAATGCACAAAAGGTCCTGCCAACATTAGCGGACTGCACTAACGACTGACGGCTGCGCCTTCCCTACCATAACAACCCTGAtt < 1:377552/149‑1 (MQ=255) gCCCGGCAGTTCGACGTCTACGTCAATGACCAGAAAGTTGGATCGTTTAACCCTGATGTTCGGAATGCACAAAAGGTCCTGCCAACATTAGCGGACTGCACTAACGACTGACGGCTGCGCCTTCCCTACCATAACAACCCTGATTGCCt > 1:300070/1‑149 (MQ=255) cccGGCAGTTCGACGTCTACGTCAATGACCAGAAAGTTGGATCGTTTAACCCTGATGTTCGGAATGCACAAAAGGTCCTGCCAACATTAGCGGACTGCACTAACGACTGACGGCTGCGCCTTCCCTACCATAACAACCCTGATTGCCTc < 8:5235/149‑1 (MQ=255) cGGCAGTTCGACGTCTACGTCAATGACCAGAAAGTTGGATCGTTTAACCCTGATGTTCGGAATGCACAAAAGGTCCTGCCAACATTAGCGGACTGCACTAACGACTGACGGCTGCGCCTTCCCTACCATAACAACCCTGATTGCCTCcg > 4:365315/1‑149 (MQ=255) gCAGTTCGACGTCTACGTCAATGACCAGAAAGTTGGATCGTTTAACCCTGATGTTCGGAATGCACAAAAGGTCCTGCCAACATTAGCGGACTGCACTAACGACTGACGGCTGCGCCTTCCCTACCATAACAACCCTGATTGCCTCcggc > 4:371639/1‑149 (MQ=255) ttCGACGTCTACGTCAATGACCAGAAAGTTGGATCGTTTAACCCTGATGTTCGGAATGCACAAAAGGTCCTGCCAACATTAGCGGACTGCACTAACGACTGACGGCTGCGCCTTCCCTACCATAACAACCCTGATTGCCTCCGGCGGTc > 5:391902/1‑149 (MQ=255) gACGTCTACGTCAATGACCAGAAAGTTGGATCGTTTAACCCTGATGTTCGGAATGCACAAAAGGTCCTGCCAACATTAGCGGACTGCACTAACGACTGCCGGCGGCGCCTTCCCTACCATAACAACCCTGATTGCCTCCGGCGGTCgg < 1:276543/148‑1 (MQ=255) aCGTCTACGTCAATGACCAGAAAGTTGGATCGTTTAACCCTGATGTTCGGAATGCACAAAAGGTCCTGCCAACATTAGCGGACTGCACTAACGACTGACGGCTGCGCCTTCCCTACCATAACAACCCTGATTGCCTCCGGCGGTCgggg < 2:53243/149‑1 (MQ=255) tCTACGTCAATGACCAGAAAGTTGGATCGTTTAACCCTGATGTTCGGAATGCACAAAAGGTCCTGCCAACATTAGCGGACTGCACTAACGACTGACGGCTGCGCCTTCCCTACCATAACAACCCTGATTGCCTCCGGCGGTCGGGGGtt > 5:9759/1‑149 (MQ=255) tACGTCAATGACCAGAAAGTTGGATCGTTTAACCCTGATGTTCGGAATGCACAAAAGGTCCTGCCAACATTAGCGGACTGCACTAACGACTGACGGCTGCGCCTTCCCTACCATAACAACCCTGATTGCCTCCGGCGGTCGGGGGTTTc > 5:224454/1‑149 (MQ=255) tACGTCAATGACCAGAAAGTTGGATCGTTTAACCCTGATGTTCGGAATGCACAAAAGGTCCTGCCAACATTAGCGGACTGCACTAACGACTGACGGCTGCGCCTTCCCTACCATAACAACCCTGATTGCCTCCGGCGGTCGGGGGTTTc > 5:401774/1‑149 (MQ=255) aCGTCAATGACCAGAAAGTTGGATCGTTTAACCCTGATGTTCGGAATGCACAAAAGGTCCTGCCAACATTAGCGGACTGCACTAACGACTGACGGCTGCGCCTTCCCTACCATAACAACCCTGATTGCCTCCGGCGGTCGGGGGTTTCt > 6:209610/1‑149 (MQ=255) gTCAATGACCAGAAAGTTGGATCGTTTAACCCTGATGTTCGGAATGCACAAAAGGTCCTGCCAACATTAGCGGACTGCACTAACGACTGACGGCTGCGCCTTCCCTACCATAACAACCCTGATTGCCTCCGGCGGTCGGGGGTTTCttt < 2:170559/149‑1 (MQ=255) tCAATGACCAGAAAGTTGGATCGTTTAACCCTGATGTTCGGAATGCACAAAAGGTCCTGCCAACATTAGCGGACTGCACTAACGACTGACGGCTGCGCCTTCCCTACCATAACAACCCTGATTGCCTCCGGCGGTCGGGGGTTTCtttt < 5:209610/149‑1 (MQ=255) tGACCAGAAAGTTGGATCGTTTAACCCTGATGTTCGGAATGCACAAAAGGTCCTGCCAACATTAGCGGACTGCACTAACGACTGACGGCTGCGCCTTCCCTACCATAACAACCCTGATTGCCTCCGCCGGTCGGGGGTTTCATTTTtct > 7:208879/1‑149 (MQ=255) aCCAGAAAGTTGGATCGTTTAACCCTGATGTTCGGAATGCACAAAAGGTCCTGCCAACATTAGCGGACTGCACTAACGACTGACGGCTGCGCCTTCCCTACCATAACAACCCTGATTGCCTCCGGCGGTCGGGGGTTTCTTTTTtctc < 6:391902/148‑1 (MQ=255) cAGAAAGTTGGATCGTTTAACCCTGATGTTCGGAATGCACAAAAGGTCTTGCCAACATTAGCGGACTGCACTAACGACTGACGGCTGCGCCTTCCCTACCATAACAACCCTGATTGCCTCCGGCGGTCGGGGGTTTCttt < 1:172038/140‑1 (MQ=255) cAGAAAGTTGGATCGTTTAACCCTGATGTTCGGAATGCACAAAAGGTCTTGCCAACATTAGCGGACTGCACTAACGACTGACGGCTGCGCCTTCCCTACCATAACAACCCTGATTGCCTCCGGCGGTCGGGGGTTTCttt > 2:172038/1‑140 (MQ=255) cAGAAAGTTGGATCGTTTAACCCTGATGTTCGGAATGCACAAAAGGTCCTGCCAACATTAGCGGACTGCACTAACGACTGACGGCTGCGCCTTCCCTACCATAACAACCCTGATTGCCTCCGGCGGTCGGGGGTTTCt < 3:182009/138‑1 (MQ=255) cAGAAAGTTGGATCGTTTAACCCTGATGTTCGGAATGCACAAAAGGTCCTGCCAACATTAGCGGACTGCACTAACGACTGACGGCTGCGCCTTCCCTACCATAACAACCCTGATTGCCTCCGGCGGTCGGGGGTTTCt > 4:182009/1‑138 (MQ=255) gAAAGTTGGATCGTTTAACCCTGATGTTCGGAATGCACAAAAGGTCCTGCCAACATTAGCGGACTGCACTAACGACTGACGGCTGCGCCTTCCCTACCATAACAACCCTGATTGCCTCCGGCGGTCGGGGGTTTCTTTTTTCTCCTTaa > 7:230088/1‑149 (MQ=255) gATCGTTTAACCCTGATGTTCGGAATGCACAAAAGGTCCTGCCAACATTAGCGGACTGCACTAACGACTGACGGCTGCGCCTTCCCTACCATAACAACCCTGATTGCCTCCGGCGGTCGGGGGTTTCTTTTTTCTCCTTAATCTCCag < 6:224454/148‑1 (MQ=255) tttAACCCTGATGTTCGGAATGCACAAAAGGTCCTGCCAACATTAGCGGACTGCACTAACGACTGACGGCTGCGCCTTCCCTACCATAACAACCCTGATTGCCTCCGGCGGTCGGGGGTTTCTTTTTTCTCCTTAATCTCCAGAGGTAg < 3:365315/149‑1 (MQ=255) tttAACCCTGATGTTCGGAATGCACAAAAGGTCCTGCCAACATTAGCGGACTGCACTAACGACTGACGGCTGCGCCTTCCCTACCATAACAACCCTGATTGCCTCCGGCGGTCGGGGGTTTCTTTTTTCTCCTTAATCTCCAGAGGTAg > 5:282197/1‑149 (MQ=255) tttAACCCTGATGTTCGGAATGCACAAAAGGTCCTGCCAACATTAGCGGACTGCACTAACGACTGACGGCTGCGCCTTCACTACCATAACAACCCTGATTGCCTCCGGCGGTCGGGGGTTTCTTTTTTCTCCTTAATCTCCAGAGGTAg > 2:302810/1‑149 (MQ=255) cccTGATGTTCGGAATGCACAAAAGGTCCTGCCAACATTAGCGGACTGCACTAACGACTGACGGCTGCGCCTTCCCTACCATAACAACCCTGATTGCCTCCGGCGGTCGGGGGTTTCTTTTTTCTCCTTAATCTCCAGAGGTAGGCCAc > 6:183864/1‑149 (MQ=255) ccTGATGTTCGGAATGCACAAAAGGTCCTGCCAACATTATCGGACTGCACTAACGACTGACGGCTGCGCCTTCCCTACCATAACAACCCTGATTGCCTCCGGCGGTCGGGGGTTTCTTTTTTCTCCTTAATCTCCAGAGGTAGGCCAc > 5:187973/1‑148 (MQ=255) ccTGATGTTCGGAATGCACAAAAGGTCCTGCCAACATTAGCGGACTGCACTAACGACTGACGGCTGCGCCTTCCCTACCATAACAACCCTGATTGCCTCCGGCGGTCGGGGGTTTCTTTTTTCTCCTTAAtctc < 5:6054/134‑1 (MQ=255) ccTGATGTTCGGAATGCACAAAAGGTCCTGCCAACATTAGCGGACTGCACTAACGACTGACGGCTGCGCCTTCCCTACCATAACAACCCTGATTGCCTCCGGCGGTCGGGGGTTTCTTTTTTCTCCTTAAtctc > 6:6054/1‑134 (MQ=255) tGATGTTCGGAATGCACAAAAGGTCCTGCCAACATTAGCGGACTGCACTAACGACTGACGGCTGCGCCTTCCCTACCATAGCAACCCTGATTGCCTCCGGCGGTCGGGGGTTTCTTTTTTCTCCTTAATCTCCAGAGGTAGGCCACGTa > 6:289025/1‑149 (MQ=255) aTGTTCGGAATGCACAAAAGGTCCTGCCAACATTAGCGGACTGCACTAACGACTGACGGCTGCGCCTTCCCTACCATAACAACCCTGATTGCCTCCGGCGGTCGGGGGTTTCTTTTTTCTCCTTAATCTCCAGAGGTAGGCCACGTACt < 5:183864/149‑1 (MQ=255) gTTCGGAATGCACAAAAGGTCCTGCCAACATTAGCGGACTGCACTAACGACTGACGGCTGCGCCTTCCCTACCATAACAACCCTGATTGCCTCCGGCGGTCGGGGGTTTCTTTTTTCTCCTTAATCTCCAGAGGTAGGCCACGTACttt > 5:86591/1‑149 (MQ=255) ggAATGCACAAAAGGTCCTGCCAACATTAGCGGACTGCACTAACGACTGACGGCTGCGCCTTCCCTACCATAACAACCCTGATTGCCTCCGGCGGTCGGGGGTTTCTTTTTTCTCCTTAATCTCCAGAGGTAGGCCACGTACTTTCGaa < 8:11504/149‑1 (MQ=255) cacaAAAGGTCCTGCCAACATTAGCGGACTGCACTAACGACTGACGGCTGCGCCTTCCCTACCATAACAACCCTGATTGCCTCCGGCGGTCGGGGGTTTCTTTTTTCTCCTTAATCTCCAGAGGTAGGCCACGTACTTTCGAACGAt > 5:78054/1‑147 (MQ=255) cacaAAAGGTCCTGCCAACATTAGCGGACTGCACTAACGACTGACGGCTGCGCCTTCCCTACCATAACAACCCTGATTGCCTCCGGCGGTCGGGGGTTTCTTTTTTCTCCTTAATCTCCAGAGGTAGGCCACGTACTTTCGAACGATGa < 3:371639/149‑1 (MQ=255) acaAAAGGTCCTGCCAACATTAGCGGACTGCACTAACGACTGACGGCTGCGCCTTCCCTACCATAACAACCCTGATTGCCTCcgg > 1:314547/1‑85 (MQ=255) acaAAAGGTCCTGCCAACATTAGCGGACTGCACTAACGACTGACGGCTGCGCCTTCCCTACCATAACAACCCTGATTGCCTCcgg < 2:314547/85‑1 (MQ=255) caAAAGGTCCTGCCAACATTAGCGGACTGCACTAACGACTGACGGCTGCGCCTTCCCTACCATATCAACCCTGATTGCCTCCGGCGGTCGGGGGTTTCTTTTTTCTCCTTAATCTCCAGAGGTAGGCCACGTACttt < 5:196133/137‑1 (MQ=255) caAAAGGTCCTGCCAACATTAGCGGACTGCACTAACGACTGACGGCTGCGCCTTCCCTACCATATCAACCCTGATTGCCTCCGGCGGTCGGGGGTTTCTTTTTTCTCCTTAATCTCCAGAGGTAGGCCACGTACttt > 6:196133/1‑137 (MQ=255) aaaaGGTCCTGCCAACATTAGCGGACTGCACTAACGACTGACGGCTGCGCCTTCCCTACCATAACAACCCTGATTGCCTCCGGCGGTCGGGGGTTTCTTTTTTCTCCTTAATCTCCAGAGGTAGGCCACGTACTTTCGAACGATGAgcg > 1:375817/1‑149 (MQ=255) gTCCTGCCAACATTAGCGGACTGCACTAACGACTGACGGCTGCGCCTTCCCTACCATAACAACCCTGATTGCCTCCGGCGGTCGGGGGTTTCTTTTTTCTCCTTAATCTCCAGAGGTAGGCCACGTACTTTCGAACGATGAGCGCAGTg < 6:187973/149‑1 (MQ=255) tCCTGCCAACATTAGCGGACTGCACTAACGACTGACGGCTGCGCCTTCCCTACCATAACACCCCTGATTGCCTCCGGCGGTCGGGGGTTTCTTTTTTCTCCTTAATCTCCAGAGGTAGGCCACGTACTTTCGAACGATGAGCGCAGTgg > 4:32873/1‑149 (MQ=255) | CATTCCCTCAACCCTTGGCTGGCGTAACGGAGATAATGCCTGGTTCAGCTTCATCATGGATATCCGTAAGGCCCGGCAGTTCGACGTCTACGTCAATGACCAGAAAGTTGGATCGTTTAACCCTGATGTTCGGAATGCACAAAAGGTCCTGCCAACATTAGCGGACTGCACTAACGACTGACGGCTGCGCCTTCCCTACCATAACAACCCTGATTGCCTCCGGCGGTCGGGGGTTTCTTTTTTCTCCTTAATCTCCAGAGGTAGGCCACGTACTTTCGAACGATGAGCGCAGTGG > NC_000913/2771435‑2771729 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |