| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,819,816 | A→C | 5.2% | L452R (CTT→CGT) | ligB ← | DNA ligase, NAD(+)‑dependent |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,819,816 | 0 | A | C | 5.2% | 262.4 / 3.4 | 86 | L452R (CTT→CGT) | ligB | DNA ligase, NAD(+)‑dependent |
| Reads supporting (aligned to +/- strand): ref base A (39/42); new base C (2/3); total (41/45) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
AGCGCCGCCCGGGTTAGCGGTATTCCCATTGCCATCACCCAGCGAGTAAAAGGCTGCTTACGAGCCAGATTAAACTGATGCCATAGCTGCGCACTTTTACTTTTCGCGATCCCCGGCGTGTTCTGTAATTGCTCTGGCGTTAATAAAAGCCAGGAAAAGATATGTTCAAAGCGATGAGTCTGATGCAGCGCGCGCCAACCGGCCTCACCAATGCCATCCAGCCCAAGAACCTGTTTTGCCCCCAGCCAGACTAAGCGTGAAATGAACTGTTCCTGACAAACATCAGAAGCAAAGT > NC_000913/3819669‑3819963 | aGCGCCGCCCGGGTTAGCGGTATTCCCATTGCCATCACCCAGCGAGTAAAAGGCTGCTTACGAGCCAGATTAAACTGATGCCATAGCTGCGCACTTTTACTTTTCGCGATCCCCGGCGTGTTCTGTAATTGCTCTGGCGTTAATaaaa < 6:190914/148‑1 (MQ=255)aGCGCCGCCCGGGTTAGCGGTATTCCCATTGCCATCACCCAGCGAGTAAAAGGCTGCTTACGAGCCAGATTAAACTGATGCCATAGCTGCGCACTTTTACTTTTCGCGATCCCCGGCGTGTTCTGTAATTGCTCTGGCGTTAATaaaa < 4:100399/148‑1 (MQ=255) gcgcCGCCCGGGTTAGCGGTATTCCCATTGCCATCACCCAGCGAGTAAAAGGCTGCTTACGAGCCAGATTAAACTGATGCCATAGCTGCGCACTTTTACTTTTCGCGATCCCCGGCGTGTTCTGTAATTGCTCTGGCGTTAATAAAAGc < 5:41683/149‑1 (MQ=255) ccgccCGGGTTAGCGGTATTCCCATTGCCATCACCCAGCGAGTAAAAGGCTGCTTACGAGCCAGATTAAACTGATGCCATAGCTGCGCACTTTTACTTTTCGCGATCCCCGGCGTGTTCTGTAATTGCTCTGGCGTTAATAAAAGCCAg < 5:218112/149‑1 (MQ=255) ccgccCGGGTTAGCGGTATTCCCATTGCCATCACCCAGCGAGTAAAAGGCTGCTTACGAGCCAGATTAAACTGATGCCATAGCTGCGCACTTTTACTTTTCGCGATCCCCGGCGTGTTCTGTAATTGCTCTGGCGTTAATAAAAGCCAg < 6:52478/149‑1 (MQ=255) cGGGTTAGCGGTATTCCCATTGCCATCACCCAGCGAGTAAAAGGCTGCTTACGAGCCAGATTAAACTGATGCCATAGCTGCGCACTTTTACTTTTCGCGATCCCCGGCGTGTTCTGTAATTGCTCTGGCTTTTATTAACGCCAgagcaa < 7:59447/149‑6 (MQ=255) gTTAGCGGTATTCCCATTGCCATCACCCAGCGAGTAAAAGGCTGCTTACGAGCCAGATTAAACTGATGCCATAGCTGCGCACTTTTACTTTTCGCGATCCCCGGCGTGTTCTGTAATTGCTCTGGCGTTAATAAAAGCCAGGAAAAGat < 7:146854/149‑1 (MQ=255) gTTAGCGGTATTCCCATTGCCATCACCCAGCGAGTAAAAGGCTGCTTACGAGCCAGATTAAACTGATGCCATAGCTGCGCACTTTTACTTTTCGCGATCCCCGGCGTGTTCTGTAATTGCTCTGGCGTTAATAAAAGCCAGGAAAAGa > 7:293476/1‑148 (MQ=255) gCGGTATTCCCATTGCCATCACCCAGCGAGTAAAAGGCTGCTTACGAGCCAGATTAAACTGATGCCATAGCTGCGCACTTTTACTTTTCGCGATCCCCGGCGTGTTCTGTAATTGCTCTGGCGTTAATAAAAGCCAGGAAAAGATATGt < 8:293476/149‑1 (MQ=255) ttCCCATTGCCATCACCCAGCGAGTAAAAGGCTGCTTACGAGCCAGATTAAACTGATGCCATAGCTGCGCACTTTTACTTTTCGCGATCCCCGGCGTGTTCTGTAATTGCTCTGGCGTTAATAAAAGCCAGGAAAAGATATGTTCAAAg < 8:32001/149‑1 (MQ=255) ccATTGCCATCACCCAGCGAGTAAAAGGCTGCTTACGAGCCAGATTAAACTGATGCCATAGCTGCGCACTTTTACTTTTCGCGATCCCCGGCGTGTTCTGTAATTGCTCTGGCGTTAATaaaa > 1:53835/1‑123 (MQ=255) ccATTGCCATCACCCAGCGAGTAAAAGGCTGCTTACGAGCCAGATTAAACTGATGCCATAGCTGCGCACTTTTACTTTTCGCGATCCCCGGCGTGTTCTGTAATTGCTCTGGCGTTAATaaaa < 2:53835/123‑1 (MQ=255) ccATTGCCATCACCCAGCGAGTAAAAGGCTGCTTACGAGCCAGATTAAACTGATGCCATAGCTGCGCACTTTTACTTTTCGCGATCCCCGGCGTGTTCTGTAATTGCTCTGGCGTTAATAAAAGCCa < 8:294360/127‑1 (MQ=255) ccATTGCCATCACCCAGCGAGTAAAAGGCTGCTTACGAGCCAGATTAAACTGATGCCATAGCTGCGCACTTTTACTTTTCGCGATCCCCGGCGTGTTCTGTAATTGCTCTGGCGTTAATAAAAGCCa > 7:294360/1‑127 (MQ=255) ccATTGCCATCACCCAGCGAGTAAAAGGCTGCTTACGAGCCAGATTAAACTGATGCCATAGCTGCGCACTTTTACTTTTCGCGATCCCCGGCGTGTTCTGTAATTGCTCTGGCGTTAATAAAAGCCAGGAAAAGATATGTTc < 6:189325/142‑1 (MQ=255) ccATTGCCATCACCCAGCGAGTAAAAGGCTGCTTACGAGCCAGATTAAACTGATGCCATAGCTGCGCACTTTTACTTTTCGCGATCCCCGGCGTGTTCTGTAATTGCTCTGGCGTTAATAAAAGCCAGGAAAAGATATGTTc > 5:189325/1‑142 (MQ=255) ccATTGCCATCACCCAGCGAGTAAAAGGCTGCTTACGAGCCAGATTAAACTGATGCCATAGCTGCGCACTTTTACTTTTCGCGATCCCCGGCGTGTTCTGTAATTGCTCTGGCGTTAATAAAAGCCAGGAAAAGATATGTTCAAAGCGa > 4:370093/1‑149 (MQ=255) aTTGCCATCACCCAGCGAGTAACAGGCTGCTTACGAGCCAGATTAAACTGATGCCATAGCTGCGCACTTTTACTTTTCGCGATCCCCGGCGTGTTCTGTAATTGCTCTGGCGTTAATAAAAGCCAGGAAAAGATATGTTCAAAGCGATg < 6:81007/149‑1 (MQ=255) cATCACCCAGCGAGTAAAAGGCTGCTTACGAGCCAGATTAAACTGATGCCATAGCTGCGCACTTTTACTTTTCGCGATCCCCGGCGTGTTCTGTAATTGCTCTGGCGTTAATAAAAGCCAGGAAAAGATATGTTCAAAGCGATGAGTCt > 2:124970/1‑149 (MQ=255) tCACCCAGCGAGTAAAAGGCTGCTTACGAGCCAGATTAAACTGATGCCATAGCTGCGCACTTTTACTTTTCGCGATCCCCGGCGTGTTCTGTAATTGCTCTGGCGTTAATAAAAGCCAGGAAAAGATATGTTCAAAGCGATGAGTCTGa < 3:206675/149‑1 (MQ=255) aCCCAGCGAGTAAAAGGCTGCTTACGAGCCAGATTAAACTGATGCCATAGCTGCGCACTTTTACTTTTCGCGATCCCCGGCGTGTTCTGTAATTGCTCTGGCGTTAATAAAAGCCAGGAAAAGATATGTTCAAAGCGATGAGTCTGATg > 5:365853/1‑149 (MQ=255) ccAGCGAGTAAAAGGCTGCTTACGAGCCAGATTAAACTGATGCCATAGCTGCGCACTTTTACTTTTCGCGATCCCCGGCGTGTTCTGTAATTGCTCTGGCGTTAATAAAAGCCAGGAAAAGATATGTTCAAAGCGATGAGTCTGATGCa < 5:368299/149‑1 (MQ=255) catcGAGTAAAAGTCTGCTTACGAGCCAGATTAAACTGATGCCATAGCTGCGCACTTTTACTTTTCGCTATCCACGGCGTTTTCTGTAATTGCTCTGGCGTTAATAAAATCCAGGAAAAGATATGTTCAAAGCGATGAGTCTGATGCAg < 5:339212/146‑1 (MQ=255) cAGCGAGTAAAAGGCTGCTTACGAGCCAGATTAAACTGATGCCATAGCTGCGCACTTTTACTTTTCGCGATCCCCGGCGTGTTCTGTAATTGCTCTGGCGTTAATAAAAGCCAGGAAAAGATATGTTCAAAGCGATGAGTCTGATGCAg > 7:248178/1‑149 (MQ=255) aaaGGCTGCTTACGAGCCAGATTAAACTGATGCCATAGCTGCGCACTTTTACTTTTCGCGATCCCCGGCGTGTTCTGTAATTGCTCTGGCGTTAATAAAAGCCAGGAAAAGATATGTTCAAAGCGATGAGTCTGATGCa > 4:360284/1‑139 (MQ=255) aaaGGCTGCTTACGAGCCAGATTAAACTGATGCCATAGCTGCGCACTTTTACTTTTCGCGATCCCCGGCGTGTTCTGTAATTGCTCTGGCGTTAATAAAAGCCAGGAAAAGATATGTTCAAAGCGATGAGTCTGATGCa < 3:360284/139‑1 (MQ=255) aaGGCTGCTTACGAGCCAGATTAAACTGATGCCATAGCTGCGCACTTTTACTTTTCGCGATCCCCGGCGTGTTCTGTAATTGCTCTGGCTTTTATTAACGCCAgagcaa > 8:218864/1‑104 (MQ=255) aaGGCTGCTTACGAGCCAGATTAAACTGATGCCATAGCTGCGCACTTTTACTTTTCGCGATCCCCGGCGTGTTCTGTAATTGCTCTGGCTTTTATTAACGCCAgagcaa < 7:218864/109‑6 (MQ=255) agctTACGAGCAAGATTAAACTGATTACATAGCTCAGCACTTTTACATATCGCGATACACCTACTGATCTGTAATAGAACTGGCGTTAATAAAAGACAGGAAAAGATATGTTCAAAGCGATCAGTCTGAAGCAGCTCGCGACACCCGGc > 6:184754/2‑149 (MQ=255) ctTACGAGCCAGATTAAACTGATGCCATAGCTGCGCACTTTTACTTTTCGCGATCCCCGGCGTGTTCTGTAATTGCTCTGGCGTTAATAAAAGCCAGGAAAAGATATGTTCAAAGCGATGAGTCTGATGCAGCGCGCGCCAACCGGc < 6:366457/147‑1 (MQ=255) ctTACGAGCCAGATTAAACT‑ATGCCATAGCTGCGCACTTTTACTTTTCGCGATCCCCGGCGTGTTCTGTAATTGCTCTGGCGTTAATAAAAGCCAGGAAAAGATATGTTCAAAGCGATGAGTCTGATGCAGCGCGCGCCAACCGGc < 7:267142/146‑1 (MQ=255) ctTACGAGCCAGATTAAACT‑ATGCCATAGCTGCGCACTTTTACTTTTCGCGATCCCCGGCGTGTTCTGTAATTGCTCTGGCGTTAATAAAAGCCAGGAAAAGATATGTTCAAAGCGATGAGTCTGATGCAGCGCGCGCCAACCGGc > 8:267142/1‑146 (MQ=255) ttACGAGCCAGATTAAACTGATGCCATAGCTGCGCACTTTTACTTTTCGCGATCCCCGGCGTGTTCTGTAATTGCTCTGGCGTTAATAAAAGCCAGGAAAAGATATGTTCAAAGCGATGAGTCTGATGCAGCGCGCGCCAACCGGCCt > 4:81347/1‑148 (MQ=255) gCCAGATTAAACTGATGCCATAGCTGCGCACTTTTACTTTTCGCGATCCCCGGCGTGTTCTGTAATTGCTCTGGCGTTAATAAAAGCCAGGAAAAGATATGTTCAAAGCGATGAGTCTGATGCAGCGCGCGCCAACCGGCCTCACCAAt > 8:175988/1‑149 (MQ=255) cAGATTAAACTGATGCCATAGCTGCGCACTTTTACTTTTCGCGATCCCCGGCGTGTTCTGTAATTGCTCTGGCGTTAATAAAAGCCAGGAAAAGATATGTTCAAAGCGATGAGTCTGATGCAGCGCGCGCCAACCGGCCTCACCAATGc < 8:248178/149‑1 (MQ=255) gATTAAACTGATGCCATAGCTGCGCACTTTTACTTTTCGCGATCCCCGGCGTGTTCTGTAATTGCTCTGGCGTTAATAAAAGCCAGGAAAAGATATGTTCAAAGCGATGAGTCTGATGCAGCGCGCGCCAACCGGCCTCACCAATGCCa > 5:269566/1‑149 (MQ=255) ttAAACTGATGCCATAGCTGCGCACTTTTACTTTTCGCGATCCCCGGCGTGTTCTGTAATTGCTCTGGCGTTAATAAAAGCCAGGAAAAGATATGTTCAAATCGATGAGTCTGATGCAGCGCGCGCCAACCGGCCTCACCAATGCCATc > 7:190383/1‑149 (MQ=255) tAAACTGATGCCATAGCTGCGCACTTTTACTTTTCGCGATCCCCGGCGTGTTCTGTAATTGCTCTGGCGTTAATAAAAGCCAGGAAAAGATATGTTCAAAGCGATGAGTCTGATGCAGCGCGCGCCAACCGGCCTCACCAATGCCATc > 8:235411/1‑148 (MQ=255) aaaCTGATGCCATAGCTGCGCACTTTTACTTTTCGCGATCCCCGGCGTGTTCTGTAATTGCTCTGGCGTTAATAAAAGCCAGGAAAAGATATGTTCAAAGCGATGAGTCTGATGCAGCGCGCGCCAACCGGCCTCACCAATGCCATc > 8:374237/1‑147 (MQ=255) aTGCCATAGCTGCGCACTTTTACTTTTCGCGATCCCCGGCGTGTTCTGTAATTGCTCTGGCGTTAATAAAAGCCAGGAAAAGATATGTTCAAAGCGATGAGTCTGATGCAGCGCGCGCCAACCGGCCTCACCAATGCCATCCAGccc > 5:389358/1‑147 (MQ=255) aTGCCATAGCTGCGCACTTTTACTTTTCGCGATCCCCGGCGTGTTCTGTAATTGCTCTGGCGTTAATAAAAGCCAGGAAAAGATATGTTCAAAGCGATGAGTCTGATGCAGCGCGCGCCAACCGGCCTCACCAATGCCATCCAGCCCa < 8:413103/148‑1 (MQ=255) tGCCATAGCTGCGCACTTTTACTTTTCGCGATCCCCGGCGTGTTCTGTAATTGCTCTGGCGTTAATAAAAGCCAGGAAAAGATATGTTCAAAGCGATGAGTCTGATGCAGCGCGCGCCAACCGGCCTCACCAATGCCATCCAGccc > 8:326760/1‑146 (MQ=255) gCCATAGCTGCGCACTTTTACTTTTCGCGATCCCCGGCGTGTTCTGTAATTGCTCTGGCGTTAATAAAAGCCAGGAAAAGATATGTTCAAAGCGATGAGTCTGATGCAGCGCGCGCCAACCGGCCTCACCAATGCCATCCAGCCCAAg > 1:311308/1‑148 (MQ=255) cATAGCTGCGCACTTTTACTTTTCGCGATCCCCGGCGTGTTCTGTAATTGCTCTGGCGTTAATAAAAGCCAGGAAAAGATATGTTCAAAGCGATGAGTCTGATGCAGCGCGCGCCAACCGGCCTCACCAATGCCATCCAGCCCAAGAAc > 2:193726/1‑149 (MQ=255) aTAGCTGCGCACTTTTACTTTTCGCGATCCCCGGCGTGTTCTGTAATTCCTCTGGCGTTAATAAAAGCCAGGAAAAGATATGTTCAAAGCGATGAGTCTGATGCAGCGCGCGCCAACCGGCCTCACCAATGCCATCCAGCCCAAGAAcc > 4:321109/1‑149 (MQ=255) tAGCTGCGCACTTTTACTTTTCGCGATCCCCGGCGTGTTCTGTAATTGCTCTGGCGTTAATAAAAGCCAGGAAAAGATATGTTCAAAGCGATGAGTCTGATGCAGCGCGCGCCAACCGGCCTCACCAATGACATCCAGCCCAAGAACCt > 3:19937/1‑149 (MQ=255) gCTGCGCACTTTTACTTTTCGCGATCCCCGGCGTGTTCTGTAATTGCTCTGGCGTTAATAAAAGCCAGGAAAAGATATGTTCAAAGCGATGAGTCTGATGCAGCGCGCGCCAACCGGCCTCACCAATGCCATCCAGCCCAAGAACCTGt > 1:389863/1‑149 (MQ=255) gCTGCGCACTTTTACTTTTCGCGATCCCCGGCGTGTTCTGTAATTCCTCTGGCGTTAATAAAAGCCAGGAAAAGATATGTTCAAAGCGATGAGTCTGATGCAGCGCGCGCCAACCGGCCTCACCAATGCCATCCAGCCCAAGAACCTGt < 3:321109/149‑1 (MQ=255) tGCGCACTTTTACTTTTCGCGATCCCCGGCGTGTTCTGTAATTGCTCTGGCGTTAATAAAATCCAGGAAAAGATATGTTCAAATCGATGAGTCTGATGCAGCGCGCGCCAACCTGCCTCACAAATGCCATCCAGCCCAAGAAACTGttt > 6:175551/1‑149 (MQ=255) cgcACTTTTACTTTTCGCGATCCCCGGCGTGTTCTGTAATTGCTCTGGCGTTAATAAAAGCCAGGAAAAGATATGTTCAAAGCGATGAGTCTGATGCAGCGCGCGCCAACCGGCCTCACCAATGCCATCCAGCCCAAGAACCTGttt < 6:269566/147‑1 (MQ=255) ttacttttCGCGATCCCCGGCGTGTTCTGTAATTGCTCTGGCGTTAATAAAAGCCAGGAAAAGATATGTTCAAAGCGATGAGTCTGATGCAGCGCGCGCCAACCGGCCTCACCAATGCCATCCAGCCCAAGAACCTGTTTTGccc > 7:68792/1‑145 (MQ=255) ttacttttCGCGATCCCCGGCGTGTTCTGTAATTGCTCTGGCGTTAATAAAAGCCAGGAAAAGATATGTTCAAAGCGATGAGTCTGATGCAGCGCGCGCCAACCGGCCTCACCAATGCCATCCAGCCCAAGAACCTGTTTTGccc < 8:68792/145‑1 (MQ=255) ttttCGCGATCCCCGGCGTGTTCTGTAATTGCTCTGGCGTTAATAAAAGCCAGGAAAAGATATGTTCAAAGCGATGAGTCTGATGCAGCGCGCGCCAACCGGCCTCACCAATGCCATCCAGCCCAAGAACCTGTTTTGCCCccagc > 3:288519/1‑146 (MQ=255) agcgATCCCAGGAGTGTTCTGTAATGTCTCTGGCGTTAATAAAAGCCAGGAAAAGAAATGTTCAAAGCGATGAGTCTGATGCAGCGCGCGCCAACCGGCCTCACCAATGCCATCCAGCCCAAGAACCTGTTTTGCCCACAGCCAGACt < 5:175551/147‑1 (MQ=255) gcgATCCCCGGCGTGTTCTGTAATTGCTCTGGCGTTAATAACAGCCAGGAAAAGATATGTTCAAAGCGATGAGTCTGATGCAGCGCGCGCCACCCGGCCTCACCAATGCCAACCAGCCCAAGAACCTGTTTTGCCCCCAGCCAGACt > 3:56214/1‑147 (MQ=255) gcgATCCCCGGCGTGTTCTGTAATTGCTCTGGCGTTAATAAAAGCCAGGAAAAGATATGTTCAAAGCGATGAGTCTGATGCAGCGCGCGCCAACCGGCCTCACCAATGCCATCCAGCCCAAGAACCTGTTTTGCCCCCAGCCAGACt > 1:218263/1‑147 (MQ=255) gcgATCCCCGGCGTGTTCTGTAATTGCTCTGGCGTTAATAAAAGCCAGGAAAAGATATGTTCAAAGCGATGAGTCTGATGCAGCGCGCGCCAACCGGCCTCACCAATGCCATCCAGCCCAAGAACCTGTTTTGCCCCCAGCCAGACTaa > 7:217826/1‑149 (MQ=255) cccGGCGTGTTCTGTAATTGCTCTGGCGTTAATAAAAGCCAGGAAAAGATATGTTCAAAGCGATGAGTCTGATGCAGCGCGCGCCAACCGGCCTCACCAATGCCATCCAGCCCAAGAACCTGTTTTGCCCCCAGCCAGACTAAGCGTg < 1:193726/148‑1 (MQ=255) cccGGCCTGTTCCGTAATTGCTCTGGCGTTAATAAAAGCCAGGAAAAGATATGTTCAAAGCGATGAGTCTGATGCAGCGCGCGCCAACCGGCCTCACCAATGCCATCCAGCCCAAGAACCTGTTTTGCCCCGAGCCAGACTAAGCGTg < 6:336874/148‑1 (MQ=255) tgtTCTGTAATTGCTCTGGCGTTAATAAAAGCCAGGAAAAGATATGTTCAAAGCGATGAGTCTGATGCAGCGCGCGCCAACCGGCCTCACCAATGCCATCCAGCCCAAGAACCTGTTTTGCCCCCAGCCAGACTAAGCGTGAAATGAAc < 2:311308/149‑1 (MQ=255) cTGTAATTGCTCTGGCGTTAATAAACGCCAGGAAAAGATATGTTCAAAGCGATGAGTCTGATGCAGCGCGCGCCAACCGGCCTCACAAATGCCATCCAGCCCAAGAACCTGTTTTGCCCCCAGCCAGACTAAGCGTGAAATGAACTGtt > 5:205184/1‑149 (MQ=255) tGTAATTGCTCTGGCGTTAATAAAAGCCAGGAAAAGATATGTTCAAAGCGATGAGTCTGATGCAGCGCGCGCCAACCGGCCTCAc > 6:173779/1‑85 (MQ=255) tGTAATTGCTCTGGCGTTAATAAAAGCCAGGAAAAGATATGTTCAAAGCGATGAGTCTGATGCAGCGCGCGCCAACCGGCCTCAc > 6:179683/1‑85 (MQ=255) tGTAATTGCTCTGGCGTTAATAAAAGCCAGGAAAAGATATGTTCAAAGCGATGAGTCTGATGCAGCGCGCGCCAACCGGCCTCAc < 5:179683/85‑1 (MQ=255) tGTAATTGCTCTGGCGTTAATAAAAGCCAGGAAAAGATATGTTCAAAGCGATGAGTCTGATGCAGCGCGCGCCAACCGGCCTCAc < 5:173779/85‑1 (MQ=255) gTAATTGCTCTGGCGTTAATAAAAGCCAGGAAAAGATATGTTCAAAGCGATGAGTCTGATGCAGCGCGCGCCCACCGGCCTCCCCAATGCCATCCAGCCCAAGAACCTGTTTTGCCCCCAGCCAGACTAAGCGTGAAATGAACTGTTcc > 6:163597/1‑149 (MQ=255) tAATTTCTCTGGCGTTAATAAACGCCAGGAAAAGATATGTTCAAAGCGATGAGTCTGATGCAGCGCGCGCCAACCGGCCTCACCAATGCCATCCAGCCCAAGAACCTGTTTTGCCCCCAGCCAGACt < 7:290404/127‑1 (MQ=255) tAATTGCTCTGGCGTTAATAAAAGCCAGGAAAAGATATGTTCAAAGCGATGAGTCTGATGCAGCGCGCGCCAACCGGCCTCCCCAATGCCATCCAGCCCAAGAACCTCATATGCAACCAGCCAGACt > 8:290404/1‑127 (MQ=255) tAATTGCTCTGGCGTTAATAAAAGCCAGGAAAAGATATGTTCAAAGCGATGAGTCTGATGCAGCGCGCGCCAACCGGCCTCACCAATGCCATCCAGCCCAAGAACCTGTTTTGCCCCCAGCCAGACTAAGCGTGAAATGAACTGTTc < 7:235411/147‑1 (MQ=255) tAATTGCTCTGGCGTTAATAAAAGCCAGGAAAAGATATGTTCAAAGCGATGAGTCTGATGCAGCGCGCGCCAACCGGCCTCACCAATGCCATCCAGCCCAAGAACCTGTTTTGCCCCCAGCCAGACTAAGCGTGAAATGAACTGTTc < 5:142944/147‑1 (MQ=255) tAATTGCTCTGGCGTTAATAAAAGCCAGGAAAAGATATGTTCAAAGCGATGAGTCTGATGCAGCGCGCGCCAACCGGCCTCACCAATGCCATCCAGCCCAAGAACCTGTTTTGCCCCCAGCCAGACTAAGCGTGAAATGAACTGTTc < 7:326760/147‑1 (MQ=255) tAATTGCTCTGGCGTTAATAAAAGCCAGGAAAAGATATGTTCAAAGCGATGAGTCTGATGCAGCGCGCGCCAACCGGCCTCACCAATGCCATCCAGCCCAAGAACCTGTTTTGCCCCCAGCCAGACTAAGCGTGAAATGAACTGTTc < 7:374237/147‑1 (MQ=255) tAATTGCTCTGGCGTTAATAAAAGCCAGGAAAAGATATGTTCAAAGCGATGAGTCTGATGCAGCGCGCGCCAACCGGCCTCACCAATGCCATCCAGCCCAAGAACCTGTTTTGCCCCCAGCCAGACTAAGCGTGAAATGAACTGTTCCt < 8:190383/149‑1 (MQ=255) tAATTGCTCTGGCGTTAATAAAAGCCAGGAAAAGATATGTTCAAAGCGATGAGTCTGATGCAGCGCGCGCCAACCGGCCTCACCAATGCCATCCAGCCCAAGAACCTGTTTTGCCCCCAGCCAGACTAAGCGTGAAATGAACTGTTCCt < 2:218263/149‑1 (MQ=255) aTTGCTCTGGCGTTAATAAAAGCCAGGAAAAGATATGTTCAAAGCGATGAGTCTGATGCAGCGCGCGCCAACCGGCCTCACCAATGCCATCCAGCCCAAGAACCTGTTTTGCCCCCAGCCAGACTAAGCGTGAAATGAACTGTTCCTGa > 1:318880/1‑149 (MQ=255) ttGCTCTGGCGTTAATAAAAGCCAGGAAAAGATATGTTCAAAGCGATGAGTCTGATGCGGCGCGCGCCAACCGGCCTCACCAATGCCATCCAGCCCAAGAACCTGTTTTGCCCccagcca < 7:281913/120‑1 (MQ=255) ttGCTCTGGCGTTAATAAAAGCCAGGAAAAGATATGTTCAAAGCGATGAGTCTGATGCCGCGCGCGCCAACCGGCCTCACCAATGCCATCCAGCCCAAGAACCTGTTTTGCCCccagcca > 8:281913/1‑120 (MQ=255) ttGATCTGGCGTTAATAAAAGCCAGGAAAAGATATGTTCAAAGCGATGAGTCTGATGCAGCGCGCGCCAACCGGCCTCACCAATGCCATCCAGCCCAAGAACCTGTTTTGCCCCCAGCCAGACTAAGCGTGAAATGAACTGTTCCTGAc < 5:184754/149‑1 (MQ=255) gCGTTAATAAAAGCCAGGAAAAGATATGTTCAAAGCGATGAGTCTGATGCAGCGCGCGCCAACCGGCCTCACCAATGCCATCCAGCCCAAGAACCTGTTTTGCCCCCAGCCAGACTAAGCGTGAAATGAACTGTTCCTGACAAACATc < 3:81347/148‑1 (MQ=255) gCGTTAATAAAAGCCAGGAAAAGATATGTTCAAAGCGATGAGTCTGATGCAGCGCGCGCCAACCGGCCTCACCAATGCCATCCAGCCCAAGAACCTGTTTTGCCCCCAGCCAGACTAAGCGTGAAATGAACTGTTACTTACAAACATCa < 8:217826/149‑1 (MQ=255) gCGTTAATAAAAGCCAGGAAAAGATATGTTCAAAGCCATGAGTCTGATGCAGCGCGCGCCAACCGGCCTCACCAATCCCATCCAGCCCAAGAACCTGTTATGCCCCCAGCCAGACTAAGCGTGAAATGAACTGTTCCTGACAAACATc < 1:124970/148‑1 (MQ=255) taataaAAGCCAGTAAAAGATCTGTTCAAAGCGATGAGTCTGATGCAGCGCGCGCCAACCGGCCTCACCAATGCCATCCAGCCCAAGAACCTTTTTTGCCCCCAGCCAGACTAAGCGTGAAATGAACTGTTCCTGACAAACATCAGaa < 6:205184/148‑1 (MQ=255) aataaAAGCCAGGAAAAGATATGTTCAAAGCGATGAGTCTGATGCAGCGCGCGCCAACCGGCCTCACCAATGCCATCCAGCCCAAGAACCTGTTTTGCCCccagc > 5:123152/1‑105 (MQ=255) aataaAAGACAGGAAAAGATATGTTCAAAGAGATGAGTCTGATGCAGCTCGCGCCAACCGGCCTCACCAATGCCATCCAGCCCAAGAACCTGTTTTGCCCccagc < 6:123152/105‑1 (MQ=255) ataaAAGCCAGGAAAAGATATGTTCAAAGCGATGAGTCTGATGCAGCGCGCGCCAACCGGCCTCACCAAt < 7:367296/70‑1 (MQ=255) ataaAAGCCAGGAAAAGATATGTTCAAAGCGATGAGTCTGATGCAGCGCGCGCCAACCGGCCTCACCAAt > 8:367296/1‑70 (MQ=255) ataaAAGCCAGGAAAAGATATGTTCAAAGCGATGAGTCTGATGCAGCGCGCGCCAACCGGCCTCACCAATGCCATCCAGCCCAAGAACCTGTTTTGCCCCCAGCCAGACTAAGCGTGAAATGAACTGTTc > 2:413713/1‑130 (MQ=255) ataaAAGCCAGGAAAAGATATGTTCAAAGCGATGAGTCTGATGCAGCGCGCGCCAACCGGCCTCACCAATGCCATCCAGCCCAAGAACCTGTTTTGCCCCCAGCCAGACTAAGCGTGAAATGAACTGTTc < 1:413713/130‑1 (MQ=255) taaAAGCCAGGAAAAGATATGTTCAAAGCGATGAGTCTGATGCAGCGCGCGCCAACCGGCCTCACCAATGCCATCCAGCCCAAGAACCTGTTTTGc > 5:224728/1‑96 (MQ=255) taaAAGCCAGGAAAAGATATGTTCAAAGCGATGAGTCTGATGCAGCGCGCGCCAACCGGCCTCACCAATGCCATCCAGCCCAAGAACCTGTTTTGc < 6:224728/96‑1 (MQ=255) aaaGCCAGGAAAAGATATGTTCAAAGCGATGAGTCTGATGCAGCGCTCGCCAACCGGCCTCACCAATGCCATCCAGCCCAAGAACCTGTTTTGCCCCCAGCCAGACTAAGCGTGAAATGAACTGTTCCTGACAAACATCAGAAGCAAAg < 6:389358/149‑1 (MQ=255) aaGCCAGGAAAAGATATGTTCAAAGCGATGAGTCTGATGCAGCGCGCGCCAACCGGCCTCACCAATGCCATCCAGCCCAAGAACCTGTTTTGCCCCCAGCCAGACTAAGCGTGAAATGAACTGTTCCTGACAAACATCAGAAGCAAAGt < 2:318880/149‑1 (MQ=255) | AGCGCCGCCCGGGTTAGCGGTATTCCCATTGCCATCACCCAGCGAGTAAAAGGCTGCTTACGAGCCAGATTAAACTGATGCCATAGCTGCGCACTTTTACTTTTCGCGATCCCCGGCGTGTTCTGTAATTGCTCTGGCGTTAATAAAAGCCAGGAAAAGATATGTTCAAAGCGATGAGTCTGATGCAGCGCGCGCCAACCGGCCTCACCAATGCCATCCAGCCCAAGAACCTGTTTTGCCCCCAGCCAGACTAAGCGTGAAATGAACTGTTCCTGACAAACATCAGAAGCAAAGT > NC_000913/3819669‑3819963 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |