New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3429885	29 (0.890)	4 (0.140)	4/224	3.5	11.4%	coding (139/258 nt)	yrdB	DUF1488 family protein
	?	NC_000913	= 3429896	36 (1.220)					coding (128/258 nt)	yrdB	DUF1488 family protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GAATATCTGGATCAGGGTAACCAGACCCAGCCTTGATCATCTTCACTTTGTTCCTGAATTAAGTTTTCCGCTTCTTCTTCCAGGTCCCAGCGATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCATACCATTCACGAGAGCGGGAAAACATACACATTTTTTATTCTCGTCCCACTCTTCCCTGTCCGGAAACTGGATGGCCTGATTCACGCGGACAATTCCTCCTGC  >  NC_000913/3429755‑3430041                                                                                                                                              |                                                                                                                                                  gAATATCTGGATCAGGGTAACCAGACCCAGCCTTGATCATCTTCACTTTGTTCCTGAATTAAGTTTTCCGCTTCTTCTTCCAGGTCCCAGCGATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGAt                                                                                                                                                <  1:146097/145‑1 (MQ=255) gAATATCTGGATCAGGGTAACCAGACCCAGCCTTGATCATCTTCACTTTGTTCCTGAATTAAGTTTTCCGCTTCTTCTTCCAGGTCCCAGCGATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGAt                                                                                                                                                >  2:146097/1‑145 (MQ=255)               gggTAACCAGACCCAGCCTTGATCATCTTCACTTTGTTCCTGAATTAAGTTTTCCGCTTCTTCTTCCAGGTCCCAGCGATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGc                                                                                                                                 >  6:63455/1‑146 (MQ=255)                                    atcatcTTCACTTTGTTCCTGAATTAAGTTTTCCGCTTCTTCTTCCAGGTCCCAGCGATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCa                                                                                                         <  5:63455/149‑1 (MQ=255)                                          ttCACTTTGTTCCTGAATTAAGTTTTCCGCTTCTTCTTCCAGGTCCCAGCGATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCa                                                                                                                    >  5:111179/1‑132 (MQ=255)                                          ttCACTTTGTTCCTGAATTAAGTTTTCCGCTTCTTCTTCCAGGTCCCAGCGATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCa                                                                                                                    <  6:111179/132‑1 (MQ=255)                                              cTTTGTTCCTGAATTAAGTTTTCCGCTTCTTCTTCCAGGTCCCAGCGATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCATACCATTCAc                                                                                               <  1:128722/149‑1 (MQ=255)                                                      cTGAATTAAGTTTTCCGCTTCTTCTTCCAGGTCCCAGCGATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCATACCATTCACGAGAGCgg                                                                                       >  5:70554/1‑149 (MQ=255)                                                           ttAAGTTTTCCGCTTCTTCTTCCAGGTCCCAGCGATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCa                                                                                                                    >  4:75343/1‑115 (MQ=255)                                                           ttAAGTTTTCCGCTTCTTCTTCCAGGTCCCAGCGATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCa                                                                                                                    <  3:75343/115‑1 (MQ=255)                                                                      gCTTCTTCTTCCAGGTCCCAGCGATGCTGACGAAAACTCGCTAACCACTGTTATGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCATACCATTCACGAGAGCGGGAAAACATACACAttt                                                                       >  5:22877/1‑149 (MQ=255)                                                                         tcttcttcCAGGTCCCAGCGATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATa                                                                                                                                               <  2:2722/74‑1 (MQ=255)                                                                          cttcttcCAGGTCCCAGCGATGCTGACGAAAACTCGCAAACCACTCTTCTGGAGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGCTCGCGCATGTCAGTATCATACCATTCACGAGACCGGGAAAACAAACACAATTtata                                                                   >  6:130017/1‑149 (MQ=255)                                                                                       ccAGCGATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGc                                                                                                          <  2:111108/97‑1 (MQ=255)                                                                                       ccAGCGATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGc                                                                                                          >  1:111108/1‑97 (MQ=255)                                                                                        cAGCGATGCTGACGAAATCTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCATACCATTCACGAGAGCGGGAAAACATACACATTTTTTATTCTCGTCCCActc                                                     >  2:180128/1‑149 (MQ=255)                                                                                                       aaaCTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCATACCATTCACGAGAGCGGGAAAAc                                                                                 <  1:180317/106‑1 (MQ=255)                                                                                                       aaaCTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCATACCATTCACGAGAGCGGGAAAAc                                                                                 >  2:180317/1‑106 (MQ=255)                                                                                                       aaaCTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCATACCATTCACGAGAGCGGGAAAACATACACATTTTTTATTCTCGTCCCACTCTTCCCTGTCCGGaaa                                      <  6:70554/149‑1 (MQ=255)                                                                                                           tCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCATACCATTCACGAGAGCGGGAAAACATACACATTTTTTATTCTCGTCCCACTCTTCCCTGTCCGGAAACTg                                   >  3:52081/1‑148 (MQ=255)                                                                                                                  ccACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCATACCATTCACGAGAGCGGGAAAACATACACATTTTTTATTCTCGTCCCACTCTTCCCTGTCCGGAAACTGGATGGCCt                           >  4:82154/1‑149 (MQ=255)                                                                                                                    aCTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCATACCATTCACGAGAGCGGGAAAACATACACATTTTTTATTCTCGTCCCACTCTTCCCTGTCCGGAAACTGGATGGCCTGa                         <  6:22877/149‑1 (MQ=255)                                                                                                                     cTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCATACCATTCACGAGAGCGGGAAAACATACACATTTTTTATTCTCGTCCCACTCTTCCCTGTCCGGAAACTGGATGGCCTGAt                        >  7:37526/1‑149 (MQ=255)                                                                                                                      tGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCATACCATTCACGAGAGCGGGAAAACATACACATTTTTTATTCTCGTCCCACTCTTCCCTGTCCGGAAACTGGATGGCCTGAtt                       >  2:118752/1‑149 (MQ=255)                                                                                                                             gCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCATACCATTCACGAGAGCGGGAAAACATACACATTTTTTATTCTCGTCCCACTCTTCCCTGTCCGGAAACTGGATGGCCTGATTCAcgcg                 <  4:52081/148‑1 (MQ=255)                                                                                                                             gCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCATACCATTCACGAGAGCGGGAAAACATACACATTTTTTATTCTCGTCCCACTCTTCCCTGTCCGGAAACTGGATGGCCTGATTCAcgcg                 <  1:180128/148‑1 (MQ=255)                                                                                                                             gCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCATACCATTCACGAGAGCGGGAAAACATACACATTTTTTATTCTCGTCCCACTCTTCCCTGTCCGGAAACTGGATGGCCTGATTCAcgc                  <  3:82154/147‑1 (MQ=255)                                                                                                                                tATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCATACCATTCACGAGAGCGGGAAAACATACACATTTTTTATTCTCGTCCCACTCTTCCCTGTCCGGAAACTGGATGGCCTGATTCACGCGGAc              >  1:4723/1‑148 (MQ=255)                                                                                                                                    tacAGTAAAGCGATACGCCAGACTCTCTCCAGAGATCGCGCATGTCAGTTGCATACCATTCACGAGAGCGGGAAAACATACACATTTTTTATTCTCGTCCCACTCTTCCCTGTCCGGAAACTGGATGGc                             <  6:165024/127‑1 (MQ=255)                                                                                                                                      cAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCATACCATTCACGAGAGCGGGAAAACATACACATTTTTTATTCTCGTCCCACTCTTCCCTGTCCGGAAACTGGATGGCCTGATTCACGCGGACAAt           >  7:63384/1‑145 (MQ=255)                                                                                                                                      cAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCATACCATTCACGAGAGCGGGAAAACATACACATTTTTTATTCTCGTCCCACTCTTCCCTGTCCGGAAACTGGATGGCCTGATTCACGCGGACAAt           <  8:63384/145‑1 (MQ=255)                                                                                                                                      cAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCATACCATTCACGAGAGCGGGAAAACATACACATTTTTTATTCTCGTCCCACTCTTCCCTGTCCGGAAACTGGATGGCCTGATTCACGCGGACAATtcct       >  1:103593/1‑149 (MQ=255)                                                                                                                                        gTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCATACCATTCACGAGAGCGGGAAAACATACACATTTTTTATTCTCGTCCCACTCTTCCCTGTCCGGAAACTGGATGGCCTGATTCACGCGGACAATtcctcc     <  8:37526/149‑1 (MQ=255)                                                                                                                                          aaaGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCATACCATTCACGAGAGCGGGAAAACATACACAttt                                                                       >  7:2772/1‑81 (MQ=255)                                                                                                                                          aaaGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCATACCATTCACGAGAGCGGGAAAACATACACAttt                                                                       <  8:2772/81‑1 (MQ=255)                                                                                                                                           aaGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCATACCATTCACGAGAGCGGGAAAACATACACATTTTTTATtc                                                                <  2:172995/87‑1 (MQ=255)                                                                                                                                           aaGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCATACCATTCACGAGAGCGGGAAAACATACACATTTTTTATtc                                                                >  1:172995/1‑87 (MQ=255)                                                                                                                                           aaGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCATACCATTCACGAGAGCGGGAAAACATACACATTTTTTATTCTCGTCCCACTCTTCCCTGTCCGGAAACTGGATGGCCTGATTCACGCGGACAATTCCTCCTGc  <  1:118752/149‑1 (MQ=255)                                                                                                                                            aGCGATACGCCAAACTCTCGCCAGAGATCGCGCATGTCAGTTGCATACCATTCACGAGAGCGGGAAAACATACACATTTTTTATTCTCGTCCCACTCTTCCCTGTCCGGAAACTGGATGGCCTGATTCACGCGGACAATTCCTCCTGc  >  1:105041/1‑148 (MQ=255)                                                                                                                                              |                                                                                                                                                  GAATATCTGGATCAGGGTAACCAGACCCAGCCTTGATCATCTTCACTTTGTTCCTGAATTAAGTTTTCCGCTTCTTCTTCCAGGTCCCAGCGATGCTGACGAAAACTCGCTAACCACTGTTCTGGCGTATCTCCAGTAAAGCGATACGCCAGACTCTCGCCAGAGATCGCGCATGTCAGTTGCATACCATTCACGAGAGCGGGAAAACATACACATTTTTTATTCTCGTCCCACTCTTCCCTGTCCGGAAACTGGATGGCCTGATTCACGCGGACAATTCCTCCTGC  >  NC_000913/3429755‑3430041

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.