| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4240741 = | 86 (1.590) | 4 (0.080) | 4/242 | NT | 5.1% | intergenic (+6/+38) | psiE/xylE | phosphate starvation inducible protein/D‑xylose transporter |
| ? | NC_000913 | 4240769 = | 71 (1.420) | intergenic (+34/+10) | psiE/xylE | phosphate starvation inducible protein/D‑xylose transporter | |||||
GTTCTGGCAGCACTGTTTATGTGGAAATTTGTCCCGGAAACCAAAGGTAAAACCCTTGAGGAGCTGGAAGCGCTCTGGGAACCGGAAACGAAGAAAACACAACAAACTGCTACGCTGTAATCTTCCTGTCCAGCACGCCGCGCCATTTCGGCGTGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4240898‑4240741‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcgtgctgGACAGGAAGATTACAGCGTAGCAGTTTGTTGTGTTTTCTTCGTTTCCGGTTCCCAGAGCGCTTCCAGCTCCTCAAGGGTTTTACCTTTGGTTTCCGGGACAAATTTCCACATAAACAGTGCTGC > NC_000913/4240769‑4240892 GTTCTGGCAGCACTGTTTATGTGGAAATTTGTCCCGGAAACCAAAGGTAAAACCCTTGAGGAGCTGGAAGCGCTCTGGGAACCGGAAACGAAGAAAACACAACAAACTGCTACGCTGTAATCTTCCTGTCCAGCACGCCGCGCCATTTC > 2:210329/1‑149 TGGCAGCACTGTTTATGTGGAAATTTGTCCCGGAAACCAAAGGTAAAACCCTTGAGGAGCTGGAAGCGCTCTGGGAACCGGAAACGAAGAAAACACAACAAACTGCTACGCTGTAATCTTCCTGTCCAGCACGCCGCGCCATTTCGGCG > 1:162351/1‑149 CAGCACTGTTTATGTGGAAATTTGTCCCGGAAACCAAAGGTAAAACCCTTGAGGAGCTGGAAGCGCTCTGGGAACCGGAAACGAAGAAAACACAACAAACTGCTACGCTGTAATCTTCCTGTCCAGCACGCCGCGCCATTTCGGCGTGC < 6:174710/149‑1 AGCACTGTTTATGTGGAAATTTGTCCCGGAAACCAAAGGTAAAACCCTTGAGGAGCTGGAAGCGCTCTGGGAACCGGAAACGAAGAAAACACAACAAACTGCTACGCTGTAATCTTCCTGTCCAGCACGCCGCGCCATTTCGGCGTGCT > 4:216472/1‑149 TGGAAATTTGTCCCGGAAACCAAAGGTAAAACCCTTGAGGAGCTGGAAGCGCTCTGGGAACCGGAAACGAAGAAAACACAACAAACTGCTACGCTGTAATCTTCCTGTCCAGCACGCCGCGCCATTTCGGCG < 3:126494/132‑1 TGGAAATTTGTCCCGGAAACCAAAGGTAAAACCCTTGAGGAGCTGGAAGCGCTCTGGGAACCGGAAACGAAGAAAACACAACAAACTGCTACGCTGTAATCTTCCTGTCCAGCACGCCGCGCCATTTCGGCG > 4:126494/1‑132 AAGCGCTCTGGGAACCGGAAACGAAGAAAACACAACAAACTGCTACGCTGTAATCTTCCTGTCCAGCACGCCGAAATGGCGCGGCGTGCTGGACAGTAAGATTACAGCGTAGCAGTTTGTTGTGTTTTCTTCGTTTCCGGTTCCCAGAG < 2:201001/149‑1 CAGCACGCCGCGCCATTTCGGCGTGCTGGACAGGAAGATTACAGCGTAGCAGTTTGTTGTGTTTTCTTCGTTTCCGGTTCCCAGA < 3:181440/85‑1 CAGCACGCCGCGCCATTTCGGCGTGCTGGACAGGAAGATTACAGCGTAGCAGTTTGTTGTGTTTTCTTCGTTTCCGGTTCCCAGA > 4:181440/1‑85 CACGCCGCGCCATTTCGGCGTGCTGGACAGGAAGATTACAGCGTAGCAGTTTGTTGTGTTTTCTTCGTTTCCGGTTCCCAGAGCGCTTCCAGCTCCTCAAGGGTTTTACCTTTGGTTTCCGGGACAAATTTCCACATAAACAGTGCTGC < 1:201001/149‑1 TGCTGGACAGGAAGATTACAGCGTAGCAGTTTGTTGTGTTTTCTTCGTTTCCGGTTCCCAGAGCGCTTCCAGCTCCTCAAGGGTTTTACCTTTGGTTTCCGGGACAAATTTCCACATAAACA < 1:170797/122‑1 TGCTGGACAGGAAGATTACAGCGTAGCAGTTTGTTGTGTTTTCTTCGTTTCCGGTTCCCAGAGCGCTTCCAGCTCCTCAAGGGTTTTACCTTTGGTTTCCGGGACAAATTTCCACATAAACA > 2:170797/1‑122 GTTCTGGCAGCACTGTTTATGTGGAAATTTGTCCCGGAAACCAAAGGTAAAACCCTTGAGGAGCTGGAAGCGCTCTGGGAACCGGAAACGAAGAAAACACAACAAACTGCTACGCTGTAATCTTCCTGTCCAGCACGCCGCGCCATTTCGGCGTGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4240898‑4240741‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcgtgctgGACAGGAAGATTACAGCGTAGCAGTTTGTTGTGTTTTCTTCGTTTCCGGTTCCCAGAGCGCTTCCAGCTCCTCAAGGGTTTTACCTTTGGTTTCCGGGACAAATTTCCACATAAACAGTGCTGC > NC_000913/4240769‑4240892 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |