| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2644346 | 46 (0.850) | 3 (0.060) | 3/250 | NT | 6.4% | intergenic (‑63/+87) | rlmN/ndk | dual specificity 23S rRNA m(2)A2503, tRNA m(2)A37 methyltransferase, SAM‑dependent/multifunctional nucleoside diphosphate kinase and apyrimidinic endonuclease and 3'‑phosphodiesterase |
| ? | NC_000913 | = 2644366 | 44 (0.850) | intergenic (‑83/+67) | rlmN/ndk | dual specificity 23S rRNA m(2)A2503, tRNA m(2)A37 methyltransferase, SAM‑dependent/multifunctional nucleoside diphosphate kinase and apyrimidinic endonuclease and 3'‑phosphodiesterase | |||||
TCCAGCAGGTTGATTTTTCCATCTTTCGTGGTGACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCC‑GGT‑GAGCGGCTGCTCGTCCGGGGGCGCTGCATTGTACAAATTCTGGCGCACGGATGCCACGTTTGCACGCGGCATTTACGAAATTATTAACGGGTGCGCGGGCACACTTCGCCTTCGCCAAAGAAATAAGCGATTTCGCGAGCGGCAGATTCGACGGAATCAGAAC > NC_000913/2644219‑2644512 | tCCAGCAGGTTGATTTTTCCATCTTTCGTGGTGACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCC‑GGT‑GAGCGGCTGCTCGTCCGg > 7:165082‑M2/1‑148 (MQ=255) cagcagGTTGATTTTTCCATCTTTCGTGGTGACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCC‑GGT‑GAGCGGCTGCTCGTCCGggg < 7:169350‑M2/149‑4 (MQ=255) cagcagGTTGATTTTTCCATCTTTCGTGGTGACGTTTTCAGGAGTGACTAATTGTTCAGACATATGCTAATCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCC‑GGT‑GAGCGGCTGCTCGTCCGggg < 6:5260‑M2/149‑4 (MQ=255) ggTTGATTTATCCATCTTTCGTGGTGACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCC‑GGT‑GAGCGGCTGCTCGTCCGGGGGCGCt < 3:113747/149‑1 (MQ=255) gTTGATTTTTCCATCTTTCGTGGTGACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCC‑GGT‑GAGCGGCTGCTCGTCCGGGGGCGCTg > 7:235225/1‑149 (MQ=255) aTTTTTCCATCTTTCGTGGTGACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCC‑GGT‑GAGCGGCTGCTCGTCCGGGGGCGCTGCAtt < 7:137363/149‑1 (MQ=255) tttttCCATCTTTCGTGGTGACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCC‑GGT‑GAGCGGCTGCTCGTCCGGGGGCGCTGCATTg > 3:32866/1‑149 (MQ=255) tttCCTTCTTTCGTGGTGAGGTTTTCAGGTGTTACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTTTTACCCGTTATGGCCCGTGGCGGGTTTAAAAAAGAAACGCCCC‑GGT‑GAGCGGCTGCTCGTCCGGGGGCGCTGCATTGt < 8:169350/148‑1 (MQ=255) cATCTTTCGTGGGGACGTGTTCAGGTGTGACTAATTGTTCAGACATATGCTCATCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCC‑GGT‑GAGCGGCTGCTCGTCCGGGGGCGCTGCATTGTACaa < 5:151820/148‑1 (MQ=255) tCGTGGTGACGTTTTCAGGTGTTACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCC‑GGT‑GAGCGGCTGCTCGTCCGGGGGCGCTGCATTGTACAAATTCTg < 2:245934/148‑1 (MQ=255) gTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCC‑GGT‑GAGCGGCTGCTCGTCCGGGGGCGCTGCATTGTACAAATTCTGGCGCACGGATg > 3:230154/1‑149 (MQ=255) ttttCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCC‑GGT‑GAGCGGCTGCTCGTCCGGGGGCGCTGCATTGTACAAATTCTGGCGCACGGATGc > 8:190738/1‑149 (MQ=255) gtgtGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCC‑GGT‑GAGCGGCTGCTCGTCCGGGGGCGCTGCATTGTACAAATTCTGGCGCACGGATGCCACGttt > 5:71729/1‑149 (MQ=255) gtgtGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCC‑GGT‑GAGCGGCTGCTCGTCCGGGGGCGCTGCATTGTACAAATTCTGGCGCACGGATGCCACGttt > 4:155204/1‑149 (MQ=255) gtgtGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCC‑GGT‑GAGCGGCTGCTCGTCCGGGGGCGCTGCATTGTACAAATTCTGGCGCACGAATGCCACGttt > 8:241133/1‑149 (MQ=255) tgACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCC‑GGT‑GAGCGGCTGCTCGTCCGGGGGCGCTGCATTGTACAAATTCTGGCGCACGGATGCCACGTTTGCa < 3:155204/149‑1 (MQ=255) cAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCC‑GGT‑GAGCGGCTGCTCGTCCGGGGGCGCTGCATTGTACAAATTCTGGCGCACGGATGCCACGTTTGCACGCGGCATTTa < 2:4591/148‑1 (MQ=255) aGACATATCCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCC‑GGT‑GAGCGGCTGCTCGTCCGGGGGCGCTGCATTGTACAAATTCTGGCGCACGGATGCCACGTTTGCACGCGGCATTTAc > 4:103775/1‑148 (MQ=255) gACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCCGGACGAGCAGCCGCTCA‑CCGgggcgtttcttttttcaaccctccagggg < 5:101104‑M2/118‑30 (MQ=255) gACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCCGGACGAGCAGCCGCTCA‑CCGgggcgtttcttttttcaaccctccagggg > 6:101104‑M2/1‑89 (MQ=255) aCATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCC‑GGT‑GAGCGGCTGCTCGTCCGGGGGCGCTGCATTGTACAAATTCTGGCGCACGGATGCCACGTTTGCACGCGGCATTTACGa > 8:248178/1‑148 (MQ=255) atatGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCC‑GGT‑GAGCGGCTGCTCGTCCGGGGGCGCTGCATTGTACAAATTCTGGCGCACGGATGCCACGTTTGCACGCGGCATTTACGAAat > 8:57671/1‑149 (MQ=255) tatGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCC‑GGT‑GAGCGGCTGCTCGTCCGGGGGCGCTGCATTGTACAAATTCTGGCGCACGGATGCCACGTTTGCACGCGGCATTTACGAAatt < 2:5482/149‑1 (MQ=255) atGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCC‑GGT‑GAGCGGCTGCTCGTCCGGGGGCGCTGCATTGTACAAATTCTGGCGCACGGATGCCACGTTTGCACGCGGCATTTACGAAatta > 7:220238/1‑149 (MQ=255) aTTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCC‑GGT‑GAGCGGCTGCTCGTCCGGGGGCGCTGCATTGTACAAATTCTGGCGCACGGATGCCACGTTTGCACGCGGCATTTACGAAATTATTAAc > 3:149316/1‑149 (MQ=255) aTTCCGCCCTCGTTATTACACGTTATGGCACCTGGAGGGTTGAAAAAAGAAACGCCCC‑GGT‑GAGCGGCTGCTCGTCCGGGGGCGCGGCATTGTACAAATACTGGCGCACGGATGCCACGTTTGCACTCGGCATTAAAGAAATTATTAAc > 8:120570/1‑149 (MQ=255) ttCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCC‑GGT‑GAGCGGCTGCTCGTCCGGGGGCGCTGCATTGTACAAATTCTGGCGCACGGATGCCACGTTTGCACGCGGCATTTACGAAATTATTaa < 7:152224/147‑1 (MQ=255) cTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCC‑GGT‑GAGCGGCTGCTCGTCCGGGGGCGCTGCATTGTACAAATTCTGGCGCACGGATGCCACGTTTGCACGCGGCATTTACGAAATTATTAACGGGTgcgc < 4:230154/149‑1 (MQ=255) tCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCC‑GGT‑GAGCGGCTGCTCGTCCGGGGGCGCTGCATTGTACAAATTCTGGCGCACGGATGCCACGTTTGCACGCGGCATTTACGAAATTATTAACGGGTGcgcg > 5:93557/1‑149 (MQ=255) ttaCACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCC‑GGT‑GAGCGGCTGCTCGTCCGGGGGCGCTGCATTGTACAAATTCTGGCGCACGGATGCCACGTTTGCACGCGGCATTTACGaaa < 4:157597/126‑1 (MQ=255) ttaCACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCC‑GGT‑GAGCGGCTGCTCGTCCGGGGGCGCTGCATTGTACAAATTCTGGCGCACGGATGCCACGTTTGCACGCGGCATTTACGaaa > 3:157597/1‑126 (MQ=255) ttaCACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCC‑GGT‑GAGCGGCTGCTCGTCCGGGGGCGCTGCATTGTACAAATTCTGGCGCACGGATGCCACGTTTGCACGCGGCATTTACGAAATTATTAACGGGTGCGCGGGcaca > 5:64628/1‑149 (MQ=255) taCACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCC‑GGT‑GAGCGGCTGCTCGTCCGGGGGCGCTGCATTGTACAAATTCTGGCGCACGGATGCCACGTTTGCACGCGGCATTTACGAAATTATTAACGGGTGCGCGGGCacac > 4:8518/1‑149 (MQ=255) acacGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCC‑GGT‑GAGCGGCTGCTCGTCCGGGGGCGCTGCATTGTACAAATTCTGGCGCACGGATGCCACGTTTGCACGCGGCATTTACGAAATTATTAACGGGTGCGCGGGCACAct > 7:131156/1‑149 (MQ=255) cacGTTATGGCCCATGGAGGGTTGAAAAAAGAAACCCCCC‑GGT‑GAGCGCCTCCACTTCCGGGGGCGATACATTTTAAAAATACTGGGGCACGCATGCCACTTTTGCACGCGGCAATAACAAAATTATTAACAGTTCAGCGGGCACActa > 6:175738/1‑148 (MQ=255) acGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCC‑GGT‑GAGCGGCTGCTCGTCCGGGGGCGCTGCATTGTACAAATTCTGGCGCACGGATGCCACGTTTGCACGCGGCATTTACGAAATTATTAACGGGTGCGCGGGCACActtc > 4:189057/1‑149 (MQ=255) ccccTGGAGGGTTGAAAAAAGAAACGCCCC‑GGT‑GAGCGGCTGCTCGTCCGGGGGCGCTGCATTGTACAAATTCTGGCGCACGAATGCCACGTTTGCACGCGGCATTTACGAAATTATTAACGGGTGCGCGGGCACACttcgccttcgcc < 7:241133/149‑1 (MQ=255) gTTGAAAAAAGAAACGCCCC‑GGT‑GAGCGGCTGCTCGTCCGGGGGCGCTGCATTGTACAAATTCTGGCGCACGGATGCCCCGTTTGCCCGCGGCATTTACGAAATTATTAACGGGTGCGCGGGCACACTTCGCCTTCGCCTAAGAAAt > 3:143388/1‑147 (MQ=255) ttGAAAAAAGAAACGCCCC‑GGT‑GAGCGGCTGCTCGTCCGGGGGCGCTGCATTGTACAAATTCTGGCGCACGGATGCCACGTTTGCACGCGGCATTTACGAAATTATTAACGGGTGCGCGGGCACACTTCGCCTTCGCCAAAGAAATAAg > 3:148816/1‑149 (MQ=255) gAAAAAAGAAACGCCCC‑GGT‑GAGCGGCTGCTCGTCCGGGGGCGCTGCATTGTACAAATTCTGGCGCACGGATGCCACGTTTGCACGCGGCATTTACGAAATTATTAACGGGTGCGCGGGCACACTTCGCCTTCGCCAAAGAAATAAGc < 8:104136/148‑1 (MQ=255) aaaaaaGAAACGCCCC‑GGT‑GAGCGGCTGCTCGTCCGGGGGCGCTGCATTGTACAAATTCTGGCGCACGGATGCCACGTTTGCACGCGGCATTTACGAAATTATTAACGGGTGCGCGGGCACACTTCGCCTTCGCCAAAGAAATAAGCGa < 6:93557/149‑1 (MQ=255) aaaaaGAAACGCCCC‑GGT‑GAGCGGCTGCTCGTCCGGGGGCGCTGCATTGTACAAATTCTGGCGCACGGATGCCACGTTTGCACGCGGCATTTACGAAATTATTAAc < 8:246947/106‑1 (MQ=255) aaaaaGAAACGCCCC‑GGT‑GAGCGGCTGCTCGTCCGGGGGCGCTGCATTGTACAAATTCTGGCGCACGGATGCCACGTTTGCACGCGGCATTTACGAAATTATTAAc > 7:246947/1‑106 (MQ=255) aaaaaGAAACGCCCC‑GGT‑GAGCGGCTGCTCGTCCGGGGGCGCTGCATTGTACAAATTCTGGCGCACGGATGCCACGTTTGCACGCGGCATTTACGAAATTATTAACGGGTGCGCGGGCACACTTCGCCTTCGCCAAAGAAATAAGCGAt > 5:22963/1‑149 (MQ=255) aaaGAAACGCCCC‑GGT‑GAGCGGCTGCTCGTCCGGGGGCGCTGCATTGTACAAATTCTGGCGCACGGATGCCACGTTTGCACGCGGCATTTACGAAATTATTAACGGGTGCGCGGGCACACTTCGCCTTCGCCAAAGAAATAAGCGAttt < 4:149316/149‑1 (MQ=255) aaaGAAACGCCCC‑GGT‑GAGCGGCTGCTCGTCCGGGGGCGCTGCATTGTACAAATTCTGGCGCACGGATGCCACGTTTGCACGCGGCATTTACGAAATTATTAACGGGTGCGCGGGCACACTTCGCCTTCGCCAAAGAAATAAGCGAttt > 3:173861/1‑149 (MQ=255) aaCGCCCC‑GGT‑GAGCGGCTGCTCGTCCGGGGGCGCTGCATTGTACAAATTCTGGCGCACGGATGCCACGTTTGCACGCGGCATTTACGAAATTATTAACGGGTGCGCGGGCACACTTCGCCTTCGCCAAAGAAATAAGCGATTTCGCGa < 6:22963/149‑1 (MQ=255) gT‑GAGCGGCTGCTCGTCCGGGGGCGCTGCATTGTACAAATTCTGGCGCACGGATGCCACGTTTGCACGCGGCATTTACGAAATTATTAACGGGTGCGCGGGCACACTTCGCCTTCGCCAAAGAAATAAGCGATTTCGCGAGCGGCAGAt > 1:25705/1‑149 (MQ=255) t‑GAGCGGCTGCTCGTCCGgggcgtttcttttttcaaccctccaggggccataacgtgtaataacgaggccggaatagcatatgtctgaacaattagtcacacctgaaaacgtcaccacgaaagatggaaaaatcaacctgctggatct < 4:71821‑M2/148‑131 (MQ=255) t‑GAGCGGCTGCTCGTCCGGGGGCGCTGCATTGTACAAATTCTGGCGCACGGATGCCACGTTTGCACGCGGCATTTACGAAATTATTAACGGGTGCGCTGGCAGACTTCGCCTTCGCCAAAGAAATAAGCGATTTCGCGAGCTGCAGAtt < 7:120570/149‑1 (MQ=255) cGGCTGCTCGTCCGGGGGCGCTGCATTGTACAAATTCTGGCGCACGGATGCCACGTTTGCACGCGGCATTTACGAAATTATTAACGGGTGCGCGGGCACACTTCGCCTTCGCCAAAGAAATAAGCGATTTCGCGAGCGGCAGATTCGAc > 7:97454/1‑149 (MQ=255) tCGTCCGGGGGCGCTGCATTGTACAAATTCTGGCGCACGGATGCCACGTTTGCACGCGGCATTTACGAAATTATTAACGGGTGCGCGGGCACACTTCGCCTTCGCCAAAGAAATAAGCGATTTCGCGAGCGGCAGATTCGACGGAAt > 8:146963/1‑147 (MQ=255) gTCCGGGGGCGCTGCATTGTACAAATTCTGGCGCACGGATGCCACGTTTGCACGCGGCATTTACGAAATTATTAACGGGTGCGCTGGCACACTTCGCCTTCGCCAAAGAAATAAGCGATTTCGCGAGCGGCAGATTCGACGGAATCa < 6:71729/147‑1 (MQ=255) gTCCGGGGGCGCTGCATTGTACAAATTCTGGCGCACGGATGCCACGTTTGCACGCGGCATTTACGAAATTATTAACGGGTGCGCGGGCACACTTCGCCTTCGCCAAAGAAATAAGCGATTTCGCGAGCGGCAGATTCGACGGAATCAGa < 2:25705/149‑1 (MQ=255) gTCCGGGGGCGCTGCATTGTACAAATTCTGGCGCACGGATGCCACGTTTGCACGCGGCATTTACGAAATTATTAACGGGTGCGCGGGCACACTTCGCCTTCGCCAAAGAAATAAGCGATTTCGCGAGCGGCAGATTCGACGGAATCAGa > 4:159400/1‑149 (MQ=255) tCCGGGGGCGCTGCATTGTACAAATTCTGGCGCACGGATGCCACGTTTGCACGCGGCATTTACGAAATTATTAACGGGTGCGCGGGCACACTTCGCCTTCGCCAAAGAAATAAGCGATTTCGCGAGCGGCAGATTCGACGGAATCAGaa > 2:180328/1‑149 (MQ=255) cGGGGGCGCTGCATTGTACAAATTCTGGCGCACGGATTCCACGTTTGCACGCGTCATTTACGAAATTATTAACGGGTGCTCTGGCACACTTCGCCTTCGCCAAAGAAATAAGCGATTTCGCGAGAGGCAGAATCGACGGAATCAGAAc < 4:205605/148‑1 (MQ=255) | TCCAGCAGGTTGATTTTTCCATCTTTCGTGGTGACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCC‑GGT‑GAGCGGCTGCTCGTCCGGGGGCGCTGCATTGTACAAATTCTGGCGCACGGATGCCACGTTTGCACGCGGCATTTACGAAATTATTAACGGGTGCGCGGGCACACTTCGCCTTCGCCAAAGAAATAAGCGATTTCGCGAGCGGCAGATTCGACGGAATCAGAAC > NC_000913/2644219‑2644512 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |