BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
MC JC	NC_000913	1,335,075	Δ714 bp		ymiA–yciX	ymiA, yciX

Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	1335075	1335788	714	114 [0]	[1] 113	ymiA–yciX	ymiA,yciX

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1335074	0 (0.000)	112 (1.260)	82/278	0.1	99.6%	intergenic (+245/‑50)	cysB/ymiA	N‑acetylserine‑responsive cysteine regulon transcriptional activator; autorepressor/uncharacterized protein
*	?	NC_000913	1335789 =	1 (0.010)	112 (1.260)	82/278	0.1	99.6%	intergenic (+331/‑42)	yciX/acnA	uncharacterized protein/aconitate hydratase 1; aconitase A

Only 100 of 113 total aligned reads displayed.

AACTCCTCTGGATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACTTACCACTACTACAGCCTGCCGCTTGCTGCTAAATCACTGGGCGAT  >  NC_000913/1335642‑1335932

tcatatttatagggtaaattacctgtaaagtagtgtctaattacccgcctcgcaaactccagttttcaaatatctatttcaggtcaaaagattgaattattcactggagacgattcgtaaattcgctggatttttgactaaagtttcaa                                                                                                                                                >  3:201636‑M2/148‑149 (MQ=255)

  atatttatagggtaaattacctgtaaagtagtgtctaattacccgcctcgcaaactccagttttcaaatatctatttcaggtcaaaagattgaattattcactggagacgattcgtaaattcgctggatttttgactaaagtttcaa                                                                                                                                                <  7:61160‑M2/2‑1 (MQ=255)

  atatttatagggtaaattacctgtaaagtagtgtctaattacccgcctcgcaaactccagttttcaaatatctatttcaggtcaaaagattgaattattcactggagacgattcgtaaattcgctggatttttgactaaagtttcaa                                                                                                                                                <  2:198361‑M2/2‑1 (MQ=255)

  atatttatagggtaaattacctgtaaagtagtgtctaattacccgcctcgcaaactccagttttcaaatatctatttcaggtcaaaagattgaattattcactggagacgattcgtaaattcgctggatttttgactaaagtttcaa                                                                                                                                                <  4:325896‑M2/2‑1 (MQ=255)

  atatttatagggtaaattacctgtaaagtagtgtctaattacccgcctcgcaaactccagttttcaaatatctatttcaggtcaaaagattgaattattcactggagacgattcgtaaattcgctggatttttgactaaagtttcAaga                                                                                                                                              <  1:350601‑M2/4‑1 (MQ=255)

   tatttatagggtaaattacctgtaaagtagtgtctaattacccgcctcgcaaactccagttttcaaatatctatttcaggtcaaaagattgaattattcactggagacgattcgtaaattcgctggatttttgactaaagtttcaa                                                                                                                                                >  7:217870‑M2/145‑146 (MQ=255)

   tatttatagggtaaattacctgtaaagtagtgtctaattacccgcctcgcaaactccagttttcaaatatctatttcaggtcaaaagattgaattattcactggagacgattcgtaaattcgctggatttttgactaaagtttcaa                                                                                                                                                >  7:178316‑M2/145‑146 (MQ=255)

    atttatagggtaaattacctgtaaagtagtgtctaattacccgcctcgcaaactccagttttcaaatatctatttcaggtcaaaagattgaattattcactggagacgattcgtaaattcgctggatttttgactaaagtttcAagag                                                                                                                                             >  2:261294‑M2/144‑148 (MQ=255)

             gtaaattccctgtaaagtagtgtctaattacacgcctcgcaaactccagttatcaaatatctatttcaggtcaaaagattgaattattcactggagacgattcgtaaattcgctggatttttgactaaagtttcAAGAGAATCAGGGCt                                                                                                                                   >  8:240181‑M2/135‑149 (MQ=255)

             gtaaattacctgtaaagtagtgtctaattacccgcctcgcaaactccagttttcaaatatctatttcaggtcaaaagattgaattattcactggagacgattcgtaaattcgctggatttttgactaaagtttcAAGAGAATCAGGGCt                                                                                                                                   >  1:191971‑M2/135‑149 (MQ=255)

             gtaaattacctgtaaagtagtgtctaattacccgactcgcaaactccagttttcaaatatctatttcaggtcaaaagattgaattattcactggagacgattcgtaaattcgcgggatttttgactaaagtttcAAGAGAATCAGGGCt                                                                                                                                   <  6:120777‑M2/15‑1 (MQ=255)

                aattacctgtaaagtagtgtctaattacccgcctcgcaaactccagttttcaaatatctatttcaggtcaaaagattgaattattcactggagacgattcgtaaattcgctggatttttgactaaagtttcAAGAGAATCAGGGCTTc                                                                                                                                 <  6:193906‑M2/17‑1 (MQ=255)

                    acctgtaaagtagtgtctaattacccgcctcgcaaactccagttttcaaatatctatttcaggtcaaaagattgaattattcactggagacgattcgtaaattcgctggatttttgactaaagtttcAAGAGAATCAGGGCTTCGCAAc                                                                                                                            >  1:276760‑M2/128‑149 (MQ=255)

                     cctgtaaagtagtgtctaattacccgcctcgcaaactccagttttcaaatatctatttcaggtcaaaagattgaattattcactggagacgattcgtaaattcgctggatttttgactaaagtttcAAGAGAATCAGGGCTTCGCAAcc                                                                                                                           >  5:120682‑M2/127‑149 (MQ=255)

                      ctgtaaagtagtgtctaattacccgcctcgcaaactccagttttcaaatatctatttcaggtcaaaagattgaattattcactggagacgattcgtaaattcgctggatttttgactaaagtttcAAGAGAATCAGGGCTTCGCAAccc                                                                                                                          >  4:101665‑M2/126‑149 (MQ=255)

                       tgtaaagtagtgtctaattacccgcctcgcaaactccagttttcaaatatctatttcaggtcaaaagattgaattattcactggagacgattcgtaaattcgctggatttttgactaaagtttcAAgaga                                                                                                                                            >  6:67186‑M2/125‑130 (MQ=255)

                       tgtaaagtagtgtctaattacccgcctcgcaaactccagttttcaaatatctatttcaggtcaaaagattgaattattcactggagacgattcgtaaattcgctggatttttgactaaagtttcAAgaga                                                                                                                                            <  5:67186‑M2/6‑1 (MQ=255)

                        gtaaagtagtgtctaattacccgcctcgcaaactccagttttcaaatatctatttcaggtcaaaagattgaattattcactggagacgattcgtaaattcgctggatttttgactaaagtttcAAGAGAATCAGGGCTTCGCaa                                                                                                                             <  7:301914‑M2/21‑1 (MQ=255)

                        gtaaagtagtgtctaattacccgcctcgcaaactccagttttcaaatatctatttcaggtcaaaagattgaattattcactggagacgattcgtaaattcgctggatttttgactaaagtttcAAGAGAATCAGGGCTTCGCaa                                                                                                                             >  8:301914‑M2/124‑144 (MQ=255)

                        gtaaagtagtgtctaattacccgcctcgcaaactccagttttcaaatatctatttcaggtcaaaagattgaattattcactggagacgattcgtaaattcgctggatttttgactaaagtttcAAGAGAATCAGGGCTTCGCAACCCTg                                                                                                                        >  2:195105‑M2/124‑149 (MQ=255)

                         taaagtagtgtctaattacccgcctcgcaaactccagttttcaaatatctatttcaggtcaaaagattgaattattcactggagacgattcgtaaattcgctggatttttgactaaagtttcAAGAGAATCAGGGCTTCGCAACCCTGt                                                                                                                       <  5:47466‑M2/27‑1 (MQ=255)

                         taaagtagtgtctaattacccgcctcgcaaactccagttttcaaatatctatttcaggtcaaaagattgaattattcactggagacgattcgtaaattcgctggatttttgactaaagtttcAAGAGAATCAGGGCTTCGCAACCCTGt                                                                                                                       <  1:261294‑M2/27‑1 (MQ=255)

                          aaagtagtgtctaattacccgcctcgcaaactccagttttcaaatatctatttcaggtcaaaagattgaattattcactggagacgattcgtaaattcgctggatttttgactaaagtttcAAGAGAATCAGGGCTTCGCAACCCTGt                                                                                                                       <  3:278186‑M2/27‑1 (MQ=255)

                           aagtagtgtctaattacccgcctcgcaaactccagttttcaaatatctatttcaggtcaaaagattgaattattcactggagacgattcgtaaattcgctggatttttgactaaagtttcAAGAGAATCAGGGCTTCGCAACCCTGTc                                                                                                                      <  3:21246‑M2/28‑1 (MQ=255)

                           aagtagtgtctaattacccgcctcgcaaactccagttttcaaatatctatttcaggtcaaaagattgaattattcactggagacgattcgtaaattcgctggatttttgactaaagtttcAAGAGAATCAGGGCTTCGCAACCCTGTc                                                                                                                      <  8:16607‑M2/28‑1 (MQ=255)

                              tagtgtctaattacccgcctcgcaaactccagttttcaaatatctatttcaggtcaaaagattgaattattcactggagacgattcgtaaattcgctggatttttgactaaagtttcAAGAGAATCAGGGTTGCGAagccctgattctc                                                                                                                  <  4:113448‑M2/32‑7 (MQ=255)

                                gtgtctaattacccgcctcgcaaactccagttttcaaatatctatttcaggtcaaaagattgaattattcactggagacgattcgtaaattcgctggatttttgactaaagtttcAAGAGAATCAGGGCTTCGCAACCCTGTCAtt                                                                                                                   <  1:16015‑M2/31‑1 (MQ=255)

                                gtgtctaattacccgcctcgcaaactccagttttcaaatatctatttcaggtcaaaagattgaattattcactggagacgattcgtaaattcgctggatttttgactaaagtttcAAGAGAATCAGGGCTTCGCAACCCTGTCAtt                                                                                                                   >  2:16015‑M2/116‑146 (MQ=255)

                                gtgtctaattacccgcctcgcaaactccagttttcaaatatctatttcaggtcaaaagattgaattattcactggagacgattcgtaaattcgctggatttttgactaaagtttcAAGAGAATCAGGGCTTCGCAACCCTGTCATTaa                                                                                                                 <  4:276403‑M2/33‑1 (MQ=255)

                                   tctaattaccctactcgcaaactccagttttcaaatatctatttcagttcaaaagattgaattattcactggagacgattcgtaaattcgcttgatttttgactaaagtttcAAGAGAATCAGGGCTTCGCAACCCTGTAATTAagga                                                                                                              <  2:101259‑M2/36‑1 (MQ=255)

                                   tctaattacccgcctcgcaaactccagttttcaaatatctatttcaggtcaaaagattgaattattcactggagacgattcgtaaattcgctggatttttgactaaagtttcAAGAGAATCAGGGCTTCGCAACCCTGt                                                                                                                       <  4:70534‑M2/27‑1 (MQ=255)

                                   tctaattacccgcctcgcaaactccagttttcaaatatctatttcaggtcaaaagattgaattattcactggagacgattcgtaaattcgctggatttttgactaaagtttcAAGAGAATCAGGGCTTCGCAACCCTGt                                                                                                                       >  3:70534‑M2/113‑139 (MQ=255)

                                   tctaattacccgcctcgcaaactccagttttcaaatatctatttcaggtcaaaagattgaattattcactggagacgattcgtaaattcgctggatttttgactaaagtttcAAGAGAATCAGGGCTTCGCAACCCTGTCATTAaggag                                                                                                             >  1:52620‑M2/113‑149 (MQ=255)

                                   tctaattacccgcctcgcaaactccagttttcaaatatctatttcaggtcaaaagattgaattattcactggagacgattcgtaaattcgctggatttttgactaaagtttcAAGAGAATCAGGGCTTCGCAACCCTGTCATTAagga                                                                                                              <  5:157168‑M2/36‑1 (MQ=255)

                                   ccGCTTCTGCGGTGTTGTCCTTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGGTATCAAATCTTTACGCGCTGTTTGTGTTTTCTTTAATATTCACCCTGAAGCGAAGCAGGGCTTCGCAACCCTGTCATTAagga                                                                                                              <  7:89431/148‑1 (MQ=255)

                                       attacccgcctcgcaaactccagttttcaaatatctatttcaggtcacaagattgaattattcactggagacgattcgtaaattcgctggatttttgactaaaggttcAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAggagga                                                                                                           <  8:266143‑M2/39‑1 (MQ=255)

                                       attacccgcctcgcaaactccagttttcaaatatctatttcaggtcaaaagattgaattattcactggagacgattcgtaaattcgctggatttttgactaaagtttcAAGAGAATCAGGGCTTCGCAACCCTGTCATTAaggagg                                                                                                            <  8:217870‑M2/38‑1 (MQ=255)

                                       attacccgcctcgcaaactccagttttcaaatatctatttcaggtcaaaagattgaattattcactggagacgattcgtaaattcgctggatttttgactaaagtttcAAGAGAATCAGGGCTTCGCAACCCTGTCATTAaggagg                                                                                                            <  7:330987‑M2/38‑1 (MQ=255)

                                       attacccgcctcgcaaactccagttttcaaatatctatttcaggtcaaaagattgaattattcactggagacgattcgtaaattcgctggatttttgactaaagtttcAAGAGAATCAGGGATTCGCAACACTGTCattaaggagtatc                                                                                                         >  2:38631‑M2/109‑145 (MQ=255)

                                             cgcctcgcaaactccagttttcaaatatctatttcaggtcaaaagattgaattattcactggagacgattcgtaaattcgctggatttttgactaaagtttcAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATgtc                                                                                                   <  4:201636‑M2/47‑1 (MQ=255)

                                              gcctcgcaaactccagttttcaaatatctatttcaggtcaaaagattgaattattcactggagacgattcgtaaattcgctggatttttgactaaagtttcAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCt                                                                                                        <  7:58248‑M2/42‑1 (MQ=255)

                                                 tcgcaaactccagttttcaaatatctatttcaggtcaaaagattgaattattcactggagacgattcgtaaattcgctggatttttgactaaagtttcAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATgtcgtc                                                                                                >  8:171208‑M2/99‑148 (MQ=255)

                                                  cgcaaactccagttttcaaatatctatttcaggtcaaaagattgaattattcactggagacgattcgtaaattcgctggatttttgactaaagtttcAAGAGAATCAGGGCTTCGCAACCCTGTCATTAaggag                                                                                                             <  7:363713‑M2/37‑1 (MQ=255)

                                                  cgcaaactccagttttcaaatatctatttcaggtcaaaagattgaattattcactggagacgattcgtaaattcgctggatttttgactaaagtttcAAGAGAATCAGGGCTTCGCAACCCTGTCATTAaggag                                                                                                             >  8:363713‑M2/98‑134 (MQ=255)

                                                   gcaaactccagttttcaaatatctatttcaggtcaaaagattgaattattcactggagacgattcgtaaattcgctggatttttgactaaagtttcAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCa                                                                                               <  5:362453‑M2/51‑1 (MQ=255)

                                                   gcaaactccagttttcaaatatctatttcaggtcaaaagattgaattattcactggagacgattcgtaaatgcgctggattttttactaaagtttcAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCa                                                                                               <  7:265377‑M2/51‑1 (MQ=255)

                                                         tccagttttcaaatatctatttcaggtcaaaagattgaattattcactggagacgattcgtaaattcgctggatttttgactaaagtttcAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTAc                                                                                        >  1:221307‑M2/91‑148 (MQ=255)

                                                         tccagttttcaaatatctatttcaggtcaaaagattgaattattcactggagacgattcgtaaattagctggatttttgactaaagtttcAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGATATGTCGTCaaccat                                                                                          >  3:19895‑M2/91‑144 (MQ=255)

                                                           cagttttcaaatatctatttcaggtcaaaagattgaattattcactggagacgattcgtaaattcgctggatttttgactaaagtttcAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTAc                                                                                        >  7:257164‑M2/89‑146 (MQ=255)

                                                             gttttcaaatatctatttcaggtcaaaagattgaattattcactggagacgattcgtaaattcgctggatttttgactaaagtttcAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGaa                                                                                   <  2:221307‑M2/63‑1 (MQ=255)

                                                               tttcaaatatctatttcaggtcaaaagattgaattattcactggagacgattcgtaaattcgctggatttttgactaaagtttcAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGc                                                                                 >  7:196500‑M2/85‑149 (MQ=255)

                                                                  caaatatctatttcaggtcaaaagaatgaattattcactggagacgattcgtaatttcgctggatttttgactaaagtttcAAGAGAATCAGGGCTTCGCAACCCTGTCATTAATGAGGAGCTATGTCGTCAACACTACGAGAAGCCa                                                                               <  1:38631‑M2/67‑1 (MQ=255)

                                                                   aaatatctatttcaggtcaaaagattgaattattcactggagacgattcgtaaattcgctggatttttgactaaagtttcAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGt                                                                             <  7:240181‑M2/69‑1 (MQ=255)

                                                                    aatatctatttcaggtcaaaagattgaattattcactggagacgattcgtaaattcgctggatttttgactaaagtttcAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGt                                                                             >  8:313490‑M2/80‑148 (MQ=255)

                                                                     atatctatttcaggtcaaaagattgaattattcactggagacgattcgtaaattcgctggatttttgactaaagtttcAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTGTGTCGTCAACCCTACGAGAAGCCAGTaa                                                                           <  6:120682‑M2/71‑1 (MQ=255)

                                                                     atatctatttcaggtcaaaagattgaattattcactggagacgattcgtaaattcgctggatttttgactaaagtttcAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGt                                                                             >  5:378538‑M2/79‑147 (MQ=255)

                                                                            tttcaggtcaaaagattgaattattcactggagacgattcgtaaattcgctggatttttgactaaagtttcAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTCTGTCGTCAACCCTACGAGAAGCCAGTAAGGa                                                                        <  6:11282‑M2/74‑1 (MQ=255)

                                                                            tttcaggtcaaaagattgaattattcactggagacgattcgtaaattcgctggatttttgactaaagtttcAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGa                                                                        <  1:195105‑M2/74‑1 (MQ=255)

                                                                            tttcaggtcaaaagattgaattattcactggagacgattcgtaaattcgctggatttttgactaaagtttcAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACg                                                                    >  4:211179‑M2/72‑149 (MQ=255)

                                                                             ttcaggtcaaaagattgaattattcactggcgacgattcgtaaattcgctggatttttgactaaagtttcAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACg                                                                    <  6:239259‑M2/78‑1 (MQ=255)

                                                                                  gtcaaaagattgaattattcactggagacgattcgtaaattcgctggatttttgactaaagtttcAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAg                                                              >  2:18067‑M2/66‑149 (MQ=255)

                                                                                     aaaagattgaattattcactggagacgattcgtaaattcgctggatttttgactaaagtttcAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGc                                                            >  2:2964‑M2/63‑148 (MQ=255)

                                                                                       aagattgaattattcactggagacgattcgtaaattcgctggatttttgactaaagtttcAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGaa                                                                                   >  4:279137‑M2/61‑123 (MQ=255)

                                                                                          attgaattattcactggagacgattcgtaaattcgctggatttttgactaaagtttcAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCa                                                          >  7:170870‑M2/58‑145 (MQ=255)

                                                                                          attgaattattcactggagacgattcgtaaattcgctggatttttgactaaagtttcAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGa                                                      <  1:2964‑M2/92‑1 (MQ=255)

                                                                                             gaattattcactggagacgattcgtaaattcgctggatttttgactaaagtttcAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATa                                                    >  7:191421‑M2/55‑148 (MQ=255)

                                                                                                ttattcactggagacgaatcgtaaattcgctggatttttgactaaagtttcAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACga                                                                                      >  4:322115‑M2/52‑111 (MQ=255)

                                                                                                ttattcactggagacgaatcgtaaattcgctggatttttgactaaagtttcAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACga                                                                                      <  3:322115‑M2/60‑1 (MQ=255)

                                                                                                      actggagacgattcgtaaattcgctggatttttgactaaagtttcAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACTTAc                                            >  8:243611‑M2/46‑147 (MQ=255)

                                                                                                      actggagacgattcgtaaattcgctggatttttgactaaagtttcAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACTTAc                                            <  7:237714‑M2/102‑1 (MQ=255)

                                                                                                      actggagacgattcgtaaattcgctggatttttgactaaagtttcAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACTTACCa                                          <  1:207224‑M2/104‑1 (MQ=255)

                                                                                                      actggagacgattcgtaaattcgctggatttttgactaaagtttcAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACTTACCa                                          >  1:222876‑M2/46‑149 (MQ=255)

                                                                                                          gagacgattcgtaaattcgctggatttttgactaaagtttcAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACTTACCactac                                      <  3:243218‑M2/108‑1 (MQ=255)

                                                                                                          gagacgattcgtaaattcgctggatttttgactaaagtttcAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACTTACCacta                                       >  1:212717‑M2/42‑148 (MQ=255)

                                                                                                          gagacgattcgtaaattcgctggatttttgactaaagtttcAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACTTACCacta                                       <  2:212717‑M2/107‑1 (MQ=255)

                                                                                                          gagacgattcgtaaattcgctggatttttgactaaagtttcAAGAGAATCAGGGATTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACTTACCactac                                      <  8:196500‑M2/108‑1 (MQ=255)

                                                                                                             acgattcgtaaattcgctggatttttgactaaagtttcAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACTTACCActacta                                    >  3:124675‑M2/39‑148 (MQ=255)

                                                                                                              cgattcgtaaattcgctggatttttgactaaagtttcAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACTTACCACTACTACa                                  <  3:321556‑M2/112‑1 (MQ=255)

                                                                                                              cgattcgtaaattcgctggatttttgactaaagtttcAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACTTACCACTACTACa                                  <  2:191971‑M2/112‑1 (MQ=255)

                                                                                                               gattcgtaaattcgctggatttttgactaaagtttcAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCa                                                                                               <  7:196304‑M2/51‑1 (MQ=255)

                                                                                                               gattcgtaaattcgctggatttttgactaaagtttcAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCa                                                                                               >  8:196304‑M2/37‑87 (MQ=255)

                                                                                                                attcgtaaattcgctggatttttgactaaagtttcAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACTTACCACTACTACAGc                                <  2:222876‑M2/114‑1 (MQ=255)

                                                                                                                  tcgtaaattcgctggatttttgacaaaagtttcAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACTTACCACTACTACAGCCt                              >  2:250134‑M2/34‑149 (MQ=255)

                                                                                                                    gtaaattcgctggatttttgactaaagtttcAAGAGAATCAggg                                                                                                                                     >  5:3534‑M2/32‑44 (MQ=255)

                                                                                                                    gtaaattcgctggatttttgactaaagtttcAAGAGAATCAggg                                                                                                                                     <  6:3534‑M2/13‑1 (MQ=255)

                                                                                                                    gtaaattcgctggatttttgactaaagtttcAAGAGAATCAGGGCTTCGCAACCCTGTCATTAaggag                                                                                                             >  4:185169‑M2/32‑68 (MQ=255)

                                                                                                                    gtaaattcgctggatttttgactaaagtttcAAGAGAATCAGGGCTTCGCAACCCTGTCATTAaggag                                                                                                             <  3:185169‑M2/37‑1 (MQ=255)

                                                                                                                         ttcgctggatttttgactaaagtttcAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACTTACCACTACTACAGCCTGCCGc                         <  1:109705‑M2/121‑1 (MQ=255)

                                                                                                                         ttcgctggatttttgactaaagtttcAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACTTACCACTACTACAGCCTGCCGCtt                       <  7:171208‑M2/123‑1 (MQ=255)

                                                                                                                              tggatttttgactaaagtttcAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACTTACCACTACTACAGCCTGCCGCTtgctgc                  >  7:124280‑M2/22‑149 (MQ=255)

                                                                                                                                gatttttgactaaagtttcAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACTTACCACTACTACAGCCTGCCGCTTgctgct                 <  8:170870‑M2/129‑1 (MQ=255)

                                                                                                                                     ttgactaaagtttcAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACTTACCACTACTACAGCCTGCCGCTTGCTGCTAAATc            <  8:178316‑M2/134‑1 (MQ=255)

                                                                                                                                       gactaaagtttcAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACTTACCACTACTACAGCCTGCCGCTTGCTGCTAAATCAc          <  8:257164‑M2/136‑1 (MQ=255)

                                                                                                                                        actaaagtttcAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAg                                                              >  2:355968‑M2/12‑95 (MQ=255)

                                                                                                                                        actaaagtttcAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAg                                                              <  1:355968‑M2/84‑1 (MQ=255)

                                                                                                                                            aagtttcAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAAGCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACTTACCACTACTACAGCCTGCCGCTTGCTGCTAAATCACTGTGCg    <  2:52620‑M2/142‑1 (MQ=255)

                                                                                                                                            aagtttcAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACTTACCACTACTACAGCCTGCCGCTTGCTGCTAAATCACTggg      <  3:211179‑M2/140‑1 (MQ=255)

                                                                                                                                            aagtttcAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACTTACCACTACTACAGCCTGCCGCTTGCTGCTAAATCACTGGGCg    <  2:276760‑M2/142‑1 (MQ=255)

                                                                                                                                             agtttcAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACTTACCACTACTACAGCCTGCCGCTTGCTGCTAAATCACTGGGCGa   <  6:378538‑M2/143‑1 (MQ=255)

                                                                                                                                              gtttcAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACTTACCACTACTACAGCCTGCCGCTTGCTGCTAAATCACTGGGCGat  <  8:191421‑M2/144‑1 (MQ=255)

AACTCCTCTGGATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACTTACCACTACTACAGCCTGCCGCTTGCTGCTAAATCACTGGGCGAT  >  NC_000913/1335642‑1335932

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`