New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3360642	32 (0.940)	4 (0.130)	4/222	3.7	12.7%	intergenic (+26/‑534)	gltD/gltF	glutamate synthase, 4Fe‑4S protein, small subunit/periplasmic protein
	?	NC_000913	= 3360645	26 (0.840)					intergenic (+29/‑531)	gltD/gltF	glutamate synthase, 4Fe‑4S protein, small subunit/periplasmic protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GCCTTCCAGACCAGCAACCCGAAAATCTTTGCTGGCGGCGATATCGTCCGTGGTTCCGATCTGGTGGTGACCGCTATTGCCGAAGGTCGTAAGGCGGCAGACGGTATTATGAACTGGCTGGAAGTTTAAGCGAGGTAACAATGAATTCGCCAGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/3360488‑3360642 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑attcgccagacACAGTCTGGCGAATTCATTGTTACCTCGCTTAAACTTCCAGCCAGTTCATAATACCGTCTGCCGCCTTACGACCTTCGGCAATAGCGGTCACCACCAGATCGGAACCACGGACGATATCGCCGCCAGCAAAGATTTTCGGGTTGCTG  <  NC_000913/3360645‑3360499                                                                                                                                                                                                                                                                                                                GCCTTCCAGACCAGCAACCCGAAAATCTTTGCTGGCGGCGATATCGTCCGTGGTTCCGATCTGGTGGTGACCGCTATTGCCGAAGGTCGTAAGGCGGCAGACGGTATTATGAACTGGCTGGAAGTTTAAGCGAGGTAACAATGAATTCG                                                                                                                                                           >  2:149864/1‑149                     GAAAATCTTTGCTGGCGGCGATATCGTCCGTGGTTCCGATCTGGTGGTGACCGCTATTGCCGAAGGTCGTAAGGCGGCAGACGGTATTATGAACTGGCTGGAAGTTTAAGCGAGGTAACAATGAATTCGCCAGAC                                                                                                                                                     >  5:96723/1‑135                     GAAAATCTTTGCTGGCGGCGATATCGTCCGTGGTTCCGATCTGGTGGTGACCGCTATTGCCGAAGGTCGTAAGGCGGCAGACGGTATTATGAACTGGCTGGAAGTTTAAGCGAGGTAACAATGAATTCGCCAGAC                                                                                                                                                     <  6:96723/135‑1                                                           ATCTGGTGGTGACCGCTATTGCCGAAGGTCGTAAGGCGGCAGACGGTATTATGAACTGGCTGGAAGTTTAAGCGAGGTAACAATGAATTCGC                                                                                                                                                          >  7:112178/1‑92                                                           ATCTGGTGGTGACCGCTATTGCCGAAGGTCGTAAGGCGGCAGACGGTATTATGAACTGGCTGGAAGTTTAAGCGAGGTAACAATGAATTCGC                                                                                                                                                          <  8:112178/92‑1                                                                                                     ACGGTATTATGAACTGGCTGGAAGTTTAAGCGAGGTAACAATGAATTCGCCAGACACAGTCTGGCGAATTCATTGTTACCTCGCTTAAACTTCCAGCCAGTTCATAATACCGTCTGCCGCCTTACGACCTTCGGCAATAGCGGTCACCA                                                       >  8:77/1‑149                                                                                                                 ACTGGCTGGAAGTTTAAGCGAGGTAACAATGAATTCGCCAGACACAGTCTGGCGAATTCATTGTTACCTCGCTTAAACTTCCAGCCAGTTCATAATACCGTCTGCCGCCTTACGACCTTCGGCAATAGCGGTCACCACCAGATCGGAAC                                           <  7:77/149‑1                                                                                                                  CTGGCTGGAAGTTTAAGCGAGGTAACAATGAATTCGCCATTCACAGTCTGGCGAATTCATTGTTACCTCGCTTAAACTTCCAGCCAGTTCATAATACCGTCTGCCGCCTTACGACCTTCGGCAATAGCGGTCACCACCAGATCGGAA                                            <  7:30476/147‑1                                                                                                                  CTGGCTGGAAGTTTAAGCGAGGTAACAATGAATTCGCCAGACACAGTCTGGCGAATTCATTGTTACCTCGCTTAAACTTCCAGCCAGTTCATAATACCGTCTGCCGCCTTACGACCTTCGGCAATAGCGGTCACCACCAGATCGGAA                                            >  8:30476/1‑147                                                                                                                                                  TTCGCCAGACACAGTCTGGCGAATTCATTGTTACCTCGCTTAAACTTCCAGCCAGTTCATAATACCGTCTGCCGCCTTACGACCTTCGGCAATAGCGGTCACCACCAGATCGGAACCAC                                        <  1:116091/119‑1                                                                                                                                                  TTCGCCAGACACAGTCTGGCGAATTCATTGTTACCTCGCTTAAACTTCCAGCCAGTTCATAATACCGTCTGCCGCCTTACGACCTTCGGCAATAGCGGTCACCACCAGATCGGAACCAC                                        >  2:116091/1‑119                                                                                                                                                     GCCAGACACAGTCTGGCGAATTCATTGTTACCTCGCTTAAACTTCCAGCCAGTTCATAATACCGTCTGCCGCCTTACGACCTTCGGCAATAGCGGTCACCACCAGATCGGAACCACGGACGATATCGCCGCCAGCAAAGATTTTCGGGT       >  6:79549/1‑149                                                                                                                                                          ACACAGTCTGGCGAATTCATTGTTACCTCGCTTAAACTTCCAGCCAGTTCATAATACCGTCTGCCGCCTTACGACCTTCGGCAATAGCGGTCACCACCAGATCGGAACCACGGACGATATCGCCGCCAGCAAAGATTTTCGGGTTGCTG  <  5:79549/149‑1                                                                                                                                                                                                                                                                                                                GCCTTCCAGACCAGCAACCCGAAAATCTTTGCTGGCGGCGATATCGTCCGTGGTTCCGATCTGGTGGTGACCGCTATTGCCGAAGGTCGTAAGGCGGCAGACGGTATTATGAACTGGCTGGAAGTTTAAGCGAGGTAACAATGAATTCGCCAGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/3360488‑3360642 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑attcgccagacACAGTCTGGCGAATTCATTGTTACCTCGCTTAAACTTCCAGCCAGTTCATAATACCGTCTGCCGCCTTACGACCTTCGGCAATAGCGGTCACCACCAGATCGGAACCACGGACGATATCGCCGCCAGCAAAGATTTTCGGGTTGCTG  <  NC_000913/3360645‑3360499

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.