New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2909839 =27 (0.760)5 (0.150) 5/224 3.8 18.1% intergenic (‑173/+55) pyrG/mazG CTP synthetase/nucleoside triphosphate pyrophosphohydrolase
?NC_000913 2909881 = 20 (0.610)intergenic (‑215/+13) pyrG/mazG CTP synthetase/nucleoside triphosphate pyrophosphohydrolase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TGATCTCTAAGGGAATTACGCGGTCAAGCGCCATTTGTGTCATTTTTTAAATGAC‑‑‑AA‑‑GCGCTTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/2909903‑2909839
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcttgaCCGCGTAATTCCCTTAGAGATCAATTTCCTGCCGTTTTACCTGTTGCCAGACTTCTTCCATTGTTTCGAGGTCAACACCTGTCATTTCCAGTCCACGCGCGGCAACAATACGCTCCACTTCGCGAAAACGACGCTCGAATTTTTC  >  NC_000913/2909881‑2910025
                                                                                                                                                                                                                       
TGATCTCTAAGGGAATTACGCGGTCAAGCGCCATTTGTGTCATTTTTTAAATGACACAAATGGCGCTTGACCGCGTAATTCCCTTAGAGATCAATTTCCTGCCGTTTTACCTGTTGCCAGACTTCTTCCATTGTTTCGAGGTCAACACC                                                                    >  7:91116/1‑149
                     GGTCAAGCGCCATTTGTGTCATTTTTTAAATGAC‑‑‑AA‑‑GCGCTTGACCGCGTAATTCCCTTAGAGATCAATTTCCTGCCGTTTTACCTGTTGCCAGACTTCTTCCATTGTTTCGAGGTCAACACCTG                                                                  <  7:8986/125‑1
                     GGTCAAGCGCCATTTGTGTCATGTTTTAAATGAC‑‑‑AA‑‑GCGCTTGACCGCGTAATTCCCTTAGAGATCAATTTCCTGCCGTTTTACCTGTTGCCAGACTTCTTCCATTGTTTCGAGGTCAACACCTG                                                                  >  8:8986/1‑125
                      GTCAAGCGCCATTTGTGTCATTTTTTAAATGAC‑‑‑AA‑‑GCGCTTGACCGCGTAATTCCCTTAGAGATCAATTTCCTGCCGTTTTACCTGTTGCCAGACTTCTTCCATTGTTT                                                                                 <  3:90610/109‑1
                      GTCAAGCGCCATTTGTGTCATTTTTTAAATGAC‑‑‑AA‑‑GCGCTTGACCGCGTAATTCCCTTAGAGATCAATTTCCTGCCGTTTTACCTGTTGCCAGACTTCTTCCATTGTTT                                                                                 >  4:90610/1‑109
                                                                  TTGACCGCGTAATTCCCTTAGAGATCAATTTCCTGCCGTTTTACCTGTTGCCAGACTTCTTCCATTGTTTCGAGGTCAACACCTGTCATTTCCAGTCCACGCGCGGCAACAATACGCTCCACTTCGCGAAAACGACGCTCGAATTTTTC  >  2:67880/1‑149
                                                                                                                                                                                                                       
TGATCTCTAAGGGAATTACGCGGTCAAGCGCCATTTGTGTCATTTTTTAAATGAC‑‑‑AA‑‑GCGCTTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/2909903‑2909839
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcttgaCCGCGTAATTCCCTTAGAGATCAATTTCCTGCCGTTTTACCTGTTGCCAGACTTCTTCCATTGTTTCGAGGTCAACACCTGTCATTTCCAGTCCACGCGCGGCAACAATACGCTCCACTTCGCGAAAACGACGCTCGAATTTTTC  >  NC_000913/2909881‑2910025

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.